I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 5 23:04:29 +14 2023 I: pbuilder-time-stamp: 1672909469 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gudhi_2.3.0+dfsg-2.dsc] I: copying [./gudhi_2.3.0+dfsg.orig.tar.gz] I: copying [./gudhi_2.3.0+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Oct 24 09:38:28 2018 +14 gpgv: using RSA key FDDD0CFF3864277630A2186C9164FA1D17BD5D36 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gudhi_2.3.0+dfsg-2.dsc dpkg-source: info: extracting gudhi in gudhi-2.3.0+dfsg dpkg-source: info: unpacking gudhi_2.3.0+dfsg.orig.tar.gz dpkg-source: info: unpacking gudhi_2.3.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Disable-Sphinx-test-since-we-re-not-currently-buildi.patch dpkg-source: info: applying 0002-Disable-tests-that-use-DFSG-deleted-data-files.patch dpkg-source: info: applying 0003-Use-system-MathJax.patch dpkg-source: info: applying 0004-Don-t-set-runtime-library-dirs-for-Python-extensions.patch dpkg-source: info: applying 0005-Force-linking-of-Python-module-with-CGAL.patch dpkg-source: info: applying 0006-Force-linking-against-libatomic-for-parts-that-use-T.patch dpkg-source: info: applying 0007-Offline-header-for-docs.patch dpkg-source: info: applying 0008-Propagate-CXXFLAGS-when-building-Python-modules.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1974304/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1974304/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1974304/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.0.3(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=a2575279c33046fa8d782159ec7f0ada LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1974304 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.FoiG2iM1zB/pbuilderrc_y8EN --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.FoiG2iM1zB/b2 --logfile b2/build.log gudhi_2.3.0+dfsg-2.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5116 -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash -rwxr-xr-x 1 root root 109408 Mar 1 2019 date -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd -rwxr-xr-x 1 root root 93744 Mar 1 2019 df -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep -rwxr-xr-x 1 root root 35424 Mar 1 2019 false -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln -rwxr-xr-x 1 root root 56760 Jul 27 2018 login -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp -rwxr-xr-x 1 root root 43008 Jan 10 2019 more -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Jan 5 23:04 sh -> bash lrwxrwxrwx 1 root root 4 Dec 11 18:20 sh.distrib -> dash -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty -rwsr-xr-x 1 root root 63568 Jan 10 2019 su -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch -rwxr-xr-x 1 root root 35424 Mar 1 2019 true -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 22 2019 which lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew I: user script /srv/workspace/pbuilder/1974304/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake (>= 3.1), cython3, debhelper (>= 11), dh-python, libboost-chrono-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-system-dev, libboost-test-dev, libboost-timer-dev, libcgal-dev (>> 4.11.0), libcgal-qt5-dev (>> 4.11.0), libeigen3-dev, libgmp-dev, libqglviewer-dev-qt5, libtbb-dev, python3-all-dev, python3-matplotlib, python3-pytest, python3-tk, qtbase5-dev, doxygen, graphviz dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake (>= 3.1); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 11); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono-dev; however: Package libboost-chrono-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev; however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev; however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libcgal-dev (>> 4.11.0); however: Package libcgal-dev is not installed. pbuilder-satisfydepends-dummy depends on libcgal-qt5-dev (>> 4.11.0); however: Package libcgal-qt5-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgmp-dev; however: Package libgmp-dev is not installed. pbuilder-satisfydepends-dummy depends on libqglviewer-dev-qt5; however: Package libqglviewer-dev-qt5 is not installed. pbuilder-satisfydepends-dummy depends on libtbb-dev; however: Package libtbb-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-tk; however: Package python3-tk is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev; however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdmainutils{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lyx{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libboost-atomic1.67-dev{a} libboost-atomic1.67.0{a} libboost-chrono-dev{a} libboost-chrono1.67-dev{a} libboost-chrono1.67.0{a} libboost-date-time1.67-dev{a} libboost-date-time1.67.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.67-dev{a} libboost-filesystem1.67.0{a} libboost-program-options-dev{a} libboost-program-options1.67-dev{a} libboost-program-options1.67.0{a} libboost-serialization1.67-dev{a} libboost-serialization1.67.0{a} libboost-system-dev{a} libboost-system1.67-dev{a} libboost-test-dev{a} libboost-test1.67-dev{a} libboost-test1.67.0{a} libboost-thread-dev{a} libboost-thread1.67-dev{a} libboost-thread1.67.0{a} libboost-timer-dev{a} libboost-timer1.67-dev{a} libboost-timer1.67.0{a} libboost1.67-dev{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgal-dev{a} libcgal-qt5-13{a} libcgal-qt5-dev{a} libcgal13{a} libcgraph6{a} libclang1-6.0{a} libcroco3{a} libcups2{a} libcurl4{a} libdatrie1{a} libdbus-1-3{a} libdouble-conversion1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgts-0.7-5{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libice-dev{a} libice6{a} libicu63{a} libinput-bin{a} libinput10{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack3{a} libldap-2.4-2{a} libldap-common{a} libllvm6.0{a} libllvm7{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libmpfr-dev{a} libmtdev1{a} libncurses6{a} libnghttp2-14{a} libopengl0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libprocps7{a} libpsl5{a} libpthread-stubs0-dev{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.7{a} libpython3.7-dev{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libqglviewer-dev-qt5{a} libqglviewer-headers{a} libqglviewer2-qt5{a} libqt5concurrent5{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5opengl5{a} libqt5opengl5-dev{a} libqt5printsupport5{a} libqt5sql5{a} libqt5svg5{a} libqt5test5{a} libqt5widgets5{a} libqt5xml5{a} libreadline7{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libssh2-1{a} libssl1.1{a} libtbb-dev{a} libtbb2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff5{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom2{a} libwayland-client0{a} libwayland-server0{a} libwebp6{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri2-0-dev{a} libxcb-dri3-0{a} libxcb-dri3-dev{a} libxcb-glx0{a} libxcb-glx0-dev{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present-dev{a} libxcb-present0{a} libxcb-randr0{a} libxcb-randr0-dev{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shape0{a} libxcb-shape0-dev{a} libxcb-shm0{a} libxcb-sync-dev{a} libxcb-sync1{a} libxcb-util0{a} libxcb-xfixes0{a} libxcb-xfixes0-dev{a} libxcb-xinerama0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxdot4{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft2{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu-dev{a} libxmu-headers{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence-dev{a} libxshmfence1{a} libxss1{a} libxt-dev{a} libxt6{a} libxxf86vm-dev{a} libxxf86vm1{a} lsb-base{a} m4{a} man-db{a} mesa-common-dev{a} mime-support{a} pkg-config{a} po-debconf{a} procps{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-atomicwrites{a} python3-attr{a} python3-cycler{a} python3-dateutil{a} python3-dev{a} python3-distutils{a} python3-kiwisolver{a} python3-lib2to3{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pkg-resources{a} python3-pluggy{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-six{a} python3-tk{a} python3.7{a} python3.7-dev{a} python3.7-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} ttf-bitstream-vera{a} ucf{a} x11-common{a} x11proto-core-dev{a} x11proto-damage-dev{a} x11proto-dev{a} x11proto-fixes-dev{a} x11proto-xext-dev{a} x11proto-xf86vidmode-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus fonts-liberation javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libgts-bin libltdl-dev libmail-sendmail-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules libwacom-bin lynx psmisc publicsuffix python3-pil qt5-gtk-platformtheme qttranslations5-l10n shared-mime-info wget xdg-user-dirs 0 packages upgraded, 329 newly installed, 0 to remove and 0 not upgraded. Need to get 206 MB of archives. After unpacking 970 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get: 2 http://deb.debian.org/debian buster/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get: 3 http://deb.debian.org/debian buster/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get: 4 http://deb.debian.org/debian buster/main amd64 groff-base amd64 1.22.4-3+deb10u1 [916 kB] Get: 5 http://deb.debian.org/debian buster/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get: 6 http://deb.debian.org/debian buster/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get: 7 http://deb.debian.org/debian buster/main amd64 libdouble-conversion1 amd64 3.1.0-3 [39.4 kB] Get: 8 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u3 [1259 kB] Get: 9 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get: 10 http://deb.debian.org/debian buster/main amd64 libpcre2-16-0 amd64 10.32-5 [202 kB] Get: 11 http://deb.debian.org/debian buster/main amd64 libqt5core5a amd64 5.11.3+dfsg1-1+deb10u4 [1942 kB] Get: 12 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u1 [106 kB] Get: 13 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get: 14 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u2 [380 kB] Get: 15 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get: 16 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get: 17 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 18 http://deb.debian.org/debian buster/main amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get: 19 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get: 20 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get: 21 http://deb.debian.org/debian buster/main amd64 fontconfig amd64 2.13.1-2 [405 kB] Get: 22 http://deb.debian.org/debian buster/main amd64 libdrm-common all 2.4.97-1 [13.8 kB] Get: 23 http://deb.debian.org/debian buster/main amd64 libdrm2 amd64 2.4.97-1 [39.7 kB] Get: 24 http://deb.debian.org/debian buster/main amd64 libglvnd0 amd64 1.1.0-1 [48.6 kB] Get: 25 http://deb.debian.org/debian buster/main amd64 libwayland-server0 amd64 1.16.0-1 [32.5 kB] Get: 26 http://deb.debian.org/debian buster/main amd64 libgbm1 amd64 18.3.6-2+deb10u1 [67.8 kB] Get: 27 http://deb.debian.org/debian buster/main amd64 libglapi-mesa amd64 18.3.6-2+deb10u1 [66.3 kB] Get: 28 http://deb.debian.org/debian buster/main amd64 libwayland-client0 amd64 1.16.0-1 [26.4 kB] Get: 29 http://deb.debian.org/debian buster/main amd64 libx11-xcb1 amd64 2:1.6.7-1+deb10u2 [191 kB] Get: 30 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get: 31 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 32 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get: 33 http://deb.debian.org/debian buster/main amd64 libxcb-dri2-0 amd64 1.13.1-2 [101 kB] Get: 34 http://deb.debian.org/debian buster/main amd64 libxcb-dri3-0 amd64 1.13.1-2 [100 kB] Get: 35 http://deb.debian.org/debian buster/main amd64 libxcb-present0 amd64 1.13.1-2 [99.1 kB] Get: 36 http://deb.debian.org/debian buster/main amd64 libxcb-sync1 amd64 1.13.1-2 [103 kB] Get: 37 http://deb.debian.org/debian buster/main amd64 libxcb-xfixes0 amd64 1.13.1-2 [103 kB] Get: 38 http://deb.debian.org/debian buster/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get: 39 http://deb.debian.org/debian buster/main amd64 libegl-mesa0 amd64 18.3.6-2+deb10u1 [135 kB] Get: 40 http://deb.debian.org/debian buster/main amd64 libegl1 amd64 1.1.0-1 [33.6 kB] Get: 41 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u2 [299 kB] Get: 42 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u2 [757 kB] Get: 43 http://deb.debian.org/debian buster/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get: 44 http://deb.debian.org/debian buster/main amd64 libxcb-glx0 amd64 1.13.1-2 [116 kB] Get: 45 http://deb.debian.org/debian buster/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB] Get: 46 http://deb.debian.org/debian buster/main amd64 libxdamage1 amd64 1:1.1.4-3+b3 [14.9 kB] Get: 47 http://deb.debian.org/debian buster/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get: 48 http://deb.debian.org/debian buster/main amd64 libdrm-amdgpu1 amd64 2.4.97-1 [27.3 kB] Get: 49 http://deb.debian.org/debian buster/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get: 50 http://deb.debian.org/debian buster/main amd64 libdrm-intel1 amd64 2.4.97-1 [69.8 kB] Get: 51 http://deb.debian.org/debian buster/main amd64 libdrm-nouveau2 amd64 2.4.97-1 [26.3 kB] Get: 52 http://deb.debian.org/debian buster/main amd64 libdrm-radeon1 amd64 2.4.97-1 [31.1 kB] Get: 53 http://deb.debian.org/debian buster/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get: 54 http://deb.debian.org/debian buster/main amd64 libedit2 amd64 3.1-20181209-1 [94.0 kB] Get: 55 http://deb.debian.org/debian buster/main amd64 libllvm7 amd64 1:7.0.1-8+deb10u2 [13.1 MB] Get: 56 http://deb.debian.org/debian buster/main amd64 libsensors-config all 1:3.5.0-3 [31.6 kB] Get: 57 http://deb.debian.org/debian buster/main amd64 libsensors5 amd64 1:3.5.0-3 [52.6 kB] Get: 58 http://deb.debian.org/debian buster/main amd64 libgl1-mesa-dri amd64 18.3.6-2+deb10u1 [6685 kB] Get: 59 http://deb.debian.org/debian buster/main amd64 libglx-mesa0 amd64 18.3.6-2+deb10u1 [180 kB] Get: 60 http://deb.debian.org/debian buster/main amd64 libglx0 amd64 1.1.0-1 [30.0 kB] Get: 61 http://deb.debian.org/debian buster/main amd64 libgl1 amd64 1.1.0-1 [91.1 kB] Get: 62 http://deb.debian.org/debian buster/main amd64 libgraphite2-3 amd64 1.3.13-7 [80.7 kB] Get: 63 http://deb.debian.org/debian buster/main amd64 libharfbuzz0b amd64 2.3.1-1 [1187 kB] Get: 64 http://deb.debian.org/debian buster/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get: 65 http://deb.debian.org/debian buster/main amd64 x11-common all 1:7.7+19 [251 kB] Get: 66 http://deb.debian.org/debian buster/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get: 67 http://deb.debian.org/debian buster/main amd64 libevdev2 amd64 1.6.0+dfsg-1 [31.0 kB] Get: 68 http://deb.debian.org/debian buster/main amd64 libmtdev1 amd64 1.1.5-1+b1 [22.3 kB] Get: 69 http://deb.debian.org/debian buster/main amd64 libgudev-1.0-0 amd64 232-2 [13.6 kB] Get: 70 http://deb.debian.org/debian buster/main amd64 libwacom-common all 0.32-1 [39.1 kB] Get: 71 http://deb.debian.org/debian buster/main amd64 libwacom2 amd64 0.32-1 [18.8 kB] Get: 72 http://deb.debian.org/debian buster/main amd64 libinput-bin amd64 1.12.6-2+deb10u1 [16.9 kB] Get: 73 http://deb.debian.org/debian buster/main amd64 libinput10 amd64 1.12.6-2+deb10u1 [107 kB] Get: 74 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get: 75 http://deb.debian.org/debian buster/main amd64 libdbus-1-3 amd64 1.12.20-0+deb10u1 [215 kB] Get: 76 http://deb.debian.org/debian buster/main amd64 libqt5dbus5 amd64 5.11.3+dfsg1-1+deb10u4 [231 kB] Get: 77 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1d-0+deb10u7 [1539 kB] Get: 78 http://deb.debian.org/debian buster/main amd64 libqt5network5 amd64 5.11.3+dfsg1-1+deb10u4 [673 kB] Get: 79 http://deb.debian.org/debian buster/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 80 http://deb.debian.org/debian buster/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get: 81 http://deb.debian.org/debian buster/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get: 82 http://deb.debian.org/debian buster/main amd64 libxcb-util0 amd64 0.3.8-3+b2 [23.0 kB] Get: 83 http://deb.debian.org/debian buster/main amd64 libxcb-image0 amd64 0.4.0-1+b2 [24.4 kB] Get: 84 http://deb.debian.org/debian buster/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get: 85 http://deb.debian.org/debian buster/main amd64 libxcb-randr0 amd64 1.13.1-2 [110 kB] Get: 86 http://deb.debian.org/debian buster/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get: 87 http://deb.debian.org/debian buster/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get: 88 http://deb.debian.org/debian buster/main amd64 libxcb-shape0 amd64 1.13.1-2 [99.5 kB] Get: 89 http://deb.debian.org/debian buster/main amd64 libxcb-xinerama0 amd64 1.13.1-2 [98.9 kB] Get: 90 http://deb.debian.org/debian buster/main amd64 libxcb-xkb1 amd64 1.13.1-2 [123 kB] Get: 91 http://deb.debian.org/debian buster/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get: 92 http://deb.debian.org/debian buster/main amd64 xkb-data all 2.26-2 [681 kB] Get: 93 http://deb.debian.org/debian buster/main amd64 libxkbcommon0 amd64 0.8.2-1 [123 kB] Get: 94 http://deb.debian.org/debian buster/main amd64 libxkbcommon-x11-0 amd64 0.8.2-1 [39.4 kB] Get: 95 http://deb.debian.org/debian buster/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get: 96 http://deb.debian.org/debian buster/main amd64 libqt5gui5 amd64 5.11.3+dfsg1-1+deb10u4 [2844 kB] Get: 97 http://deb.debian.org/debian buster/main amd64 libqt5widgets5 amd64 5.11.3+dfsg1-1+deb10u4 [2260 kB] Get: 98 http://deb.debian.org/debian buster/main amd64 libqt5svg5 amd64 5.11.3-2 [131 kB] Get: 99 http://deb.debian.org/debian buster/main amd64 libpython3.7-minimal amd64 3.7.3-2+deb10u3 [589 kB] Get: 100 http://deb.debian.org/debian buster/main amd64 python3.7-minimal amd64 3.7.3-2+deb10u3 [1737 kB] Get: 101 http://deb.debian.org/debian buster/main amd64 python3-minimal amd64 3.7.3-1 [36.6 kB] Get: 102 http://deb.debian.org/debian buster/main amd64 mime-support all 3.62 [37.2 kB] Get: 103 http://deb.debian.org/debian buster/main amd64 libmpdec2 amd64 2.4.2-2 [87.2 kB] Get: 104 http://deb.debian.org/debian buster/main amd64 readline-common all 7.0-5 [70.6 kB] Get: 105 http://deb.debian.org/debian buster/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get: 106 http://deb.debian.org/debian buster/main amd64 libpython3.7-stdlib amd64 3.7.3-2+deb10u3 [1734 kB] Get: 107 http://deb.debian.org/debian buster/main amd64 python3.7 amd64 3.7.3-2+deb10u3 [330 kB] Get: 108 http://deb.debian.org/debian buster/main amd64 libpython3-stdlib amd64 3.7.3-1 [20.0 kB] Get: 109 http://deb.debian.org/debian buster/main amd64 python3 amd64 3.7.3-1 [61.5 kB] Get: 110 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get: 111 http://deb.debian.org/debian buster/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get: 112 http://deb.debian.org/debian buster/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get: 113 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get: 114 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get: 115 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get: 116 http://deb.debian.org/debian buster/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get: 117 http://deb.debian.org/debian buster/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get: 118 http://deb.debian.org/debian buster/main amd64 m4 amd64 1.4.18-2 [203 kB] Get: 119 http://deb.debian.org/debian buster/main amd64 autoconf all 2.69-11 [341 kB] Get: 120 http://deb.debian.org/debian buster/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get: 121 http://deb.debian.org/debian buster/main amd64 automake all 1:1.16.1-4 [771 kB] Get: 122 http://deb.debian.org/debian buster/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get: 123 http://deb.debian.org/debian buster/main amd64 libtcl8.6 amd64 8.6.9+dfsg-2 [1005 kB] Get: 124 http://deb.debian.org/debian buster/main amd64 libxft2 amd64 2.3.2-2 [57.2 kB] Get: 125 http://deb.debian.org/debian buster/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get: 126 http://deb.debian.org/debian buster/main amd64 libtk8.6 amd64 8.6.9-2 [768 kB] Get: 127 http://deb.debian.org/debian buster/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [587 kB] Get: 128 http://deb.debian.org/debian buster/main amd64 blt amd64 2.5.3+dfsg-4 [14.8 kB] Get: 129 http://deb.debian.org/debian buster/main amd64 cmake-data all 3.13.4-1 [1476 kB] Get: 130 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u2 [689 kB] Get: 131 http://deb.debian.org/debian buster/main amd64 libarchive13 amd64 3.3.3-4+deb10u1 [313 kB] Get: 132 http://deb.debian.org/debian buster/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get: 133 http://deb.debian.org/debian buster/main amd64 libkrb5support0 amd64 1.17-3+deb10u3 [65.8 kB] Get: 134 http://deb.debian.org/debian buster/main amd64 libk5crypto3 amd64 1.17-3+deb10u3 [122 kB] Get: 135 http://deb.debian.org/debian buster/main amd64 libkrb5-3 amd64 1.17-3+deb10u3 [370 kB] Get: 136 http://deb.debian.org/debian buster/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u3 [158 kB] Get: 137 http://deb.debian.org/debian buster/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1+deb10u1 [69.1 kB] Get: 138 http://deb.debian.org/debian buster/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1+deb10u1 [106 kB] Get: 139 http://deb.debian.org/debian buster/main amd64 libldap-common all 2.4.47+dfsg-3+deb10u6 [90.0 kB] Get: 140 http://deb.debian.org/debian buster/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3+deb10u6 [224 kB] Get: 141 http://deb.debian.org/debian buster/main amd64 libnghttp2-14 amd64 1.36.0-2+deb10u1 [85.0 kB] Get: 142 http://deb.debian.org/debian buster/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get: 143 http://deb.debian.org/debian buster/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get: 144 http://deb.debian.org/debian buster/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get: 145 http://deb.debian.org/debian buster/main amd64 libcurl4 amd64 7.64.0-4+deb10u2 [332 kB] Get: 146 http://deb.debian.org/debian buster/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get: 147 http://deb.debian.org/debian buster/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get: 148 http://deb.debian.org/debian buster/main amd64 libuv1 amd64 1.24.1-1+deb10u1 [110 kB] Get: 149 http://deb.debian.org/debian buster/main amd64 cmake amd64 3.13.4-1 [3480 kB] Get: 150 http://deb.debian.org/debian buster/main amd64 cython3 amd64 0.29.2-2 [1392 kB] Get: 151 http://deb.debian.org/debian buster/main amd64 libtool all 2.4.6-9 [547 kB] Get: 152 http://deb.debian.org/debian buster/main amd64 dh-autoreconf all 19 [16.9 kB] Get: 153 http://deb.debian.org/debian buster/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 154 http://deb.debian.org/debian buster/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 155 http://deb.debian.org/debian buster/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 156 http://deb.debian.org/debian buster/main amd64 dwz amd64 0.12-3 [78.0 kB] Get: 157 http://deb.debian.org/debian buster/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get: 158 http://deb.debian.org/debian buster/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get: 159 http://deb.debian.org/debian buster/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 160 http://deb.debian.org/debian buster/main amd64 po-debconf all 1.0.21 [248 kB] Get: 161 http://deb.debian.org/debian buster/main amd64 debhelper all 12.1.1 [1016 kB] Get: 162 http://deb.debian.org/debian buster/main amd64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 163 http://deb.debian.org/debian buster/main amd64 python3-distutils all 3.7.3-1 [142 kB] Get: 164 http://deb.debian.org/debian buster/main amd64 dh-python all 3.20190308 [99.3 kB] Get: 165 http://deb.debian.org/debian buster/main amd64 libllvm6.0 amd64 1:6.0.1-10 [14.7 MB] Get: 166 http://deb.debian.org/debian buster/main amd64 libclang1-6.0 amd64 1:6.0.1-10 [6951 kB] Get: 167 http://deb.debian.org/debian buster/main amd64 doxygen amd64 1.8.13-10 [3985 kB] Get: 168 http://deb.debian.org/debian buster/main amd64 fonts-lyx all 2.3.2-1 [199 kB] Get: 169 http://deb.debian.org/debian buster/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get: 170 http://deb.debian.org/debian buster/main amd64 libcairo2 amd64 1.16.0-4+deb10u1 [688 kB] Get: 171 http://deb.debian.org/debian buster/main amd64 libcdt5 amd64 2.40.1-6+deb10u1 [60.7 kB] Get: 172 http://deb.debian.org/debian buster/main amd64 libcgraph6 amd64 2.40.1-6+deb10u1 [84.2 kB] Get: 173 http://deb.debian.org/debian buster/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 174 http://deb.debian.org/debian buster/main amd64 libwebp6 amd64 0.6.1-2+deb10u1 [261 kB] Get: 175 http://deb.debian.org/debian buster/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u2 [271 kB] Get: 176 http://deb.debian.org/debian buster/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get: 177 http://deb.debian.org/debian buster/main amd64 libgd3 amd64 2.2.5-5.2 [136 kB] Get: 178 http://deb.debian.org/debian buster/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4 [158 kB] Get: 179 http://deb.debian.org/debian buster/main amd64 libltdl7 amd64 2.4.6-9 [390 kB] Get: 180 http://deb.debian.org/debian buster/main amd64 libfribidi0 amd64 1.0.5-3.1+deb10u1 [63.7 kB] Get: 181 http://deb.debian.org/debian buster/main amd64 libthai-data all 0.1.28-2 [170 kB] Get: 182 http://deb.debian.org/debian buster/main amd64 libdatrie1 amd64 0.2.12-2 [39.3 kB] Get: 183 http://deb.debian.org/debian buster/main amd64 libthai0 amd64 0.1.28-2 [54.1 kB] Get: 184 http://deb.debian.org/debian buster/main amd64 libpango-1.0-0 amd64 1.42.4-8~deb10u1 [186 kB] Get: 185 http://deb.debian.org/debian buster/main amd64 libpangoft2-1.0-0 amd64 1.42.4-8~deb10u1 [68.3 kB] Get: 186 http://deb.debian.org/debian buster/main amd64 libpangocairo-1.0-0 amd64 1.42.4-8~deb10u1 [55.7 kB] Get: 187 http://deb.debian.org/debian buster/main amd64 libpathplan4 amd64 2.40.1-6+deb10u1 [63.6 kB] Get: 188 http://deb.debian.org/debian buster/main amd64 libxdot4 amd64 2.40.1-6+deb10u1 [57.0 kB] Get: 189 http://deb.debian.org/debian buster/main amd64 libgvc6 amd64 2.40.1-6+deb10u1 [646 kB] Get: 190 http://deb.debian.org/debian buster/main amd64 libgvpr2 amd64 2.40.1-6+deb10u1 [213 kB] Get: 191 http://deb.debian.org/debian buster/main amd64 liblab-gamut1 amd64 2.40.1-6+deb10u1 [220 kB] Get: 192 http://deb.debian.org/debian buster/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get: 193 http://deb.debian.org/debian buster/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get: 194 http://deb.debian.org/debian buster/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get: 195 http://deb.debian.org/debian buster/main amd64 graphviz amd64 2.40.1-6+deb10u1 [596 kB] Get: 196 http://deb.debian.org/debian buster/main amd64 libavahi-common-data amd64 0.7-4+deb10u1 [122 kB] Get: 197 http://deb.debian.org/debian buster/main amd64 libavahi-common3 amd64 0.7-4+deb10u1 [54.4 kB] Get: 198 http://deb.debian.org/debian buster/main amd64 libavahi-client3 amd64 0.7-4+deb10u1 [58.2 kB] Get: 199 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get: 200 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get: 201 http://deb.debian.org/debian buster/main amd64 libboost1.67-dev amd64 1.67.0-13+deb10u1 [8388 kB] Get: 202 http://deb.debian.org/debian buster/main amd64 libboost-atomic1.67.0 amd64 1.67.0-13+deb10u1 [226 kB] Get: 203 http://deb.debian.org/debian buster/main amd64 libboost-atomic1.67-dev amd64 1.67.0-13+deb10u1 [225 kB] Get: 204 http://deb.debian.org/debian buster/main amd64 libboost-chrono1.67.0 amd64 1.67.0-13+deb10u1 [234 kB] Get: 205 http://deb.debian.org/debian buster/main amd64 libboost-chrono1.67-dev amd64 1.67.0-13+deb10u1 [236 kB] Get: 206 http://deb.debian.org/debian buster/main amd64 libboost-chrono-dev amd64 1.67.0.1 [4268 B] Get: 207 http://deb.debian.org/debian buster/main amd64 libboost-date-time1.67.0 amd64 1.67.0-13+deb10u1 [239 kB] Get: 208 http://deb.debian.org/debian buster/main amd64 libboost-serialization1.67.0 amd64 1.67.0-13+deb10u1 [319 kB] Get: 209 http://deb.debian.org/debian buster/main amd64 libboost-serialization1.67-dev amd64 1.67.0-13+deb10u1 [359 kB] Get: 210 http://deb.debian.org/debian buster/main amd64 libboost-date-time1.67-dev amd64 1.67.0-13+deb10u1 [248 kB] Get: 211 http://deb.debian.org/debian buster/main amd64 libboost-dev amd64 1.67.0.1 [3864 B] Get: 212 http://deb.debian.org/debian buster/main amd64 libboost-filesystem1.67.0 amd64 1.67.0-13+deb10u1 [261 kB] Get: 213 http://deb.debian.org/debian buster/main amd64 libboost-system1.67-dev amd64 1.67.0-13+deb10u1 [231 kB] Get: 214 http://deb.debian.org/debian buster/main amd64 libboost-filesystem1.67-dev amd64 1.67.0-13+deb10u1 [269 kB] Get: 215 http://deb.debian.org/debian buster/main amd64 libboost-filesystem-dev amd64 1.67.0.1 [3684 B] Get: 216 http://deb.debian.org/debian buster/main amd64 libboost-program-options1.67.0 amd64 1.67.0-13+deb10u1 [357 kB] Get: 217 http://deb.debian.org/debian buster/main amd64 libboost-program-options1.67-dev amd64 1.67.0-13+deb10u1 [385 kB] Get: 218 http://deb.debian.org/debian buster/main amd64 libboost-program-options-dev amd64 1.67.0.1 [3656 B] Get: 219 http://deb.debian.org/debian buster/main amd64 libboost-system-dev amd64 1.67.0.1 [3788 B] Get: 220 http://deb.debian.org/debian buster/main amd64 libboost-timer1.67.0 amd64 1.67.0-13+deb10u1 [231 kB] Get: 221 http://deb.debian.org/debian buster/main amd64 libboost-test1.67.0 amd64 1.67.0-13+deb10u1 [456 kB] Get: 222 http://deb.debian.org/debian buster/main amd64 libboost-test1.67-dev amd64 1.67.0-13+deb10u1 [511 kB] Get: 223 http://deb.debian.org/debian buster/main amd64 libboost-test-dev amd64 1.67.0.1 [3684 B] Get: 224 http://deb.debian.org/debian buster/main amd64 libboost-thread1.67.0 amd64 1.67.0-13+deb10u1 [268 kB] Get: 225 http://deb.debian.org/debian buster/main amd64 libboost-thread1.67-dev amd64 1.67.0-13+deb10u1 [270 kB] Get: 226 http://deb.debian.org/debian buster/main amd64 libboost-thread-dev amd64 1.67.0.1 [3672 B] Get: 227 http://deb.debian.org/debian buster/main amd64 libboost-timer1.67-dev amd64 1.67.0-13+deb10u1 [231 kB] Get: 228 http://deb.debian.org/debian buster/main amd64 libboost-timer-dev amd64 1.67.0.1 [3772 B] Get: 229 http://deb.debian.org/debian buster/main amd64 libcgal13 amd64 4.13-1+b2 [333 kB] Get: 230 http://deb.debian.org/debian buster/main amd64 libgmpxx4ldbl amd64 2:6.1.2+dfsg-4 [22.9 kB] Get: 231 http://deb.debian.org/debian buster/main amd64 libgmp-dev amd64 2:6.1.2+dfsg-4 [628 kB] Get: 232 http://deb.debian.org/debian buster/main amd64 libmpfr-dev amd64 4.0.2-1 [246 kB] Get: 233 http://deb.debian.org/debian buster/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] Get: 234 http://deb.debian.org/debian buster/main amd64 libcgal-dev amd64 4.13-1+b2 [4461 kB] Get: 235 http://deb.debian.org/debian buster/main amd64 libqt5opengl5 amd64 5.11.3+dfsg1-1+deb10u4 [161 kB] Get: 236 http://deb.debian.org/debian buster/main amd64 libqt5xml5 amd64 5.11.3+dfsg1-1+deb10u4 [128 kB] Get: 237 http://deb.debian.org/debian buster/main amd64 libcgal-qt5-13 amd64 4.13-1+b2 [212 kB] Get: 238 http://deb.debian.org/debian buster/main amd64 libcgal-qt5-dev amd64 4.13-1+b2 [348 kB] Get: 239 http://deb.debian.org/debian buster/main amd64 libcups2 amd64 2.2.10-6+deb10u4 [324 kB] Get: 240 http://deb.debian.org/debian buster/main amd64 libdrm-dev amd64 2.4.97-1 [131 kB] Get: 241 http://deb.debian.org/debian buster/main amd64 pkg-config amd64 0.29-6 [63.5 kB] Get: 242 http://deb.debian.org/debian buster/main amd64 libeigen3-dev all 3.3.7-1 [850 kB] Get: 243 http://deb.debian.org/debian buster/main amd64 libexpat1-dev amd64 2.2.6-2+deb10u1 [153 kB] Get: 244 http://deb.debian.org/debian buster/main amd64 xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get: 245 http://deb.debian.org/debian buster/main amd64 x11proto-dev all 2018.4-4 [251 kB] Get: 246 http://deb.debian.org/debian buster/main amd64 x11proto-core-dev all 2018.4-4 [3128 B] Get: 247 http://deb.debian.org/debian buster/main amd64 libxau-dev amd64 1:1.0.8-1+b2 [23.1 kB] Get: 248 http://deb.debian.org/debian buster/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get: 249 http://deb.debian.org/debian buster/main amd64 xtrans-dev all 1.3.5-1 [100 kB] Get: 250 http://deb.debian.org/debian buster/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get: 251 http://deb.debian.org/debian buster/main amd64 libxcb1-dev amd64 1.13.1-2 [174 kB] Get: 252 http://deb.debian.org/debian buster/main amd64 libx11-dev amd64 2:1.6.7-1+deb10u2 [825 kB] Get: 253 http://deb.debian.org/debian buster/main amd64 mesa-common-dev amd64 18.3.6-2+deb10u1 [611 kB] Get: 254 http://deb.debian.org/debian buster/main amd64 libglvnd-core-dev amd64 1.1.0-1 [13.2 kB] Get: 255 http://deb.debian.org/debian buster/main amd64 libgles1 amd64 1.1.0-1 [13.8 kB] Get: 256 http://deb.debian.org/debian buster/main amd64 libgles2 amd64 1.1.0-1 [19.0 kB] Get: 257 http://deb.debian.org/debian buster/main amd64 libopengl0 amd64 1.1.0-1 [33.4 kB] Get: 258 http://deb.debian.org/debian buster/main amd64 libglvnd-dev amd64 1.1.0-1 [5128 B] Get: 259 http://deb.debian.org/debian buster/main amd64 libx11-xcb-dev amd64 2:1.6.7-1+deb10u2 [193 kB] Get: 260 http://deb.debian.org/debian buster/main amd64 libxcb-dri3-dev amd64 1.13.1-2 [101 kB] Get: 261 http://deb.debian.org/debian buster/main amd64 libxcb-render0-dev amd64 1.13.1-2 [112 kB] Get: 262 http://deb.debian.org/debian buster/main amd64 libxcb-randr0-dev amd64 1.13.1-2 [114 kB] Get: 263 http://deb.debian.org/debian buster/main amd64 libxcb-shape0-dev amd64 1.13.1-2 [101 kB] Get: 264 http://deb.debian.org/debian buster/main amd64 libxcb-xfixes0-dev amd64 1.13.1-2 [105 kB] Get: 265 http://deb.debian.org/debian buster/main amd64 libxcb-sync-dev amd64 1.13.1-2 [104 kB] Get: 266 http://deb.debian.org/debian buster/main amd64 libxcb-present-dev amd64 1.13.1-2 [101 kB] Get: 267 http://deb.debian.org/debian buster/main amd64 libxshmfence-dev amd64 1.3-1 [8360 B] Get: 268 http://deb.debian.org/debian buster/main amd64 libxcb-dri2-0-dev amd64 1.13.1-2 [102 kB] Get: 269 http://deb.debian.org/debian buster/main amd64 libxcb-glx0-dev amd64 1.13.1-2 [122 kB] Get: 270 http://deb.debian.org/debian buster/main amd64 x11proto-fixes-dev all 1:2018.4-4 [3140 B] Get: 271 http://deb.debian.org/debian buster/main amd64 libxfixes-dev amd64 1:5.0.3-1 [23.8 kB] Get: 272 http://deb.debian.org/debian buster/main amd64 x11proto-damage-dev all 1:2018.4-4 [3140 B] Get: 273 http://deb.debian.org/debian buster/main amd64 libxdamage-dev amd64 1:1.1.4-3+b3 [14.6 kB] Get: 274 http://deb.debian.org/debian buster/main amd64 x11proto-xext-dev all 2018.4-4 [3128 B] Get: 275 http://deb.debian.org/debian buster/main amd64 libxext-dev amd64 2:1.3.3-1+b2 [107 kB] Get: 276 http://deb.debian.org/debian buster/main amd64 x11proto-xf86vidmode-dev all 2018.4-4 [3140 B] Get: 277 http://deb.debian.org/debian buster/main amd64 libxxf86vm-dev amd64 1:1.1.4-1+b2 [25.4 kB] Get: 278 http://deb.debian.org/debian buster/main amd64 libgl1-mesa-dev amd64 18.3.6-2+deb10u1 [48.0 kB] Get: 279 http://deb.debian.org/debian buster/main amd64 libglu1-mesa amd64 9.0.0-2.1+b3 [169 kB] Get: 280 http://deb.debian.org/debian buster/main amd64 libglu1-mesa-dev amd64 9.0.0-2.1+b3 [208 kB] Get: 281 http://deb.debian.org/debian buster/main amd64 libice-dev amd64 2:1.0.9-2 [66.8 kB] Get: 282 http://deb.debian.org/debian buster/main amd64 libjs-jquery all 3.3.1~dfsg-3+deb10u1 [332 kB] Get: 283 http://deb.debian.org/debian buster/main amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get: 284 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get: 285 http://deb.debian.org/debian buster/main amd64 libpython3.7 amd64 3.7.3-2+deb10u3 [1498 kB] Get: 286 http://deb.debian.org/debian buster/main amd64 libpython3.7-dev amd64 3.7.3-2+deb10u3 [48.4 MB] Get: 287 http://deb.debian.org/debian buster/main amd64 libpython3-dev amd64 3.7.3-1 [20.1 kB] Get: 288 http://deb.debian.org/debian buster/main amd64 libpython3-all-dev amd64 3.7.3-1 [1068 B] Get: 289 http://deb.debian.org/debian buster/main amd64 libqglviewer2-qt5 amd64 2.6.3+dfsg2-3 [212 kB] Get: 290 http://deb.debian.org/debian buster/main amd64 libqglviewer-headers all 2.6.3+dfsg2-3 [53.4 kB] Get: 291 http://deb.debian.org/debian buster/main amd64 libqt5concurrent5 amd64 5.11.3+dfsg1-1+deb10u4 [57.3 kB] Get: 292 http://deb.debian.org/debian buster/main amd64 libqt5printsupport5 amd64 5.11.3+dfsg1-1+deb10u4 [217 kB] Get: 293 http://deb.debian.org/debian buster/main amd64 libqt5sql5 amd64 5.11.3+dfsg1-1+deb10u4 [145 kB] Get: 294 http://deb.debian.org/debian buster/main amd64 libqt5test5 amd64 5.11.3+dfsg1-1+deb10u4 [150 kB] Get: 295 http://deb.debian.org/debian buster/main amd64 libvulkan1 amd64 1.1.97-2 [95.6 kB] Get: 296 http://deb.debian.org/debian buster/main amd64 libvulkan-dev amd64 1.1.97-2 [390 kB] Get: 297 http://deb.debian.org/debian buster/main amd64 qt5-qmake-bin amd64 5.11.3+dfsg1-1+deb10u4 [1004 kB] Get: 298 http://deb.debian.org/debian buster/main amd64 qtchooser amd64 66-2 [26.3 kB] Get: 299 http://deb.debian.org/debian buster/main amd64 qt5-qmake amd64 5.11.3+dfsg1-1+deb10u4 [213 kB] Get: 300 http://deb.debian.org/debian buster/main amd64 qtbase5-dev-tools amd64 5.11.3+dfsg1-1+deb10u4 [770 kB] Get: 301 http://deb.debian.org/debian buster/main amd64 qtbase5-dev amd64 5.11.3+dfsg1-1+deb10u4 [1014 kB] Get: 302 http://deb.debian.org/debian buster/main amd64 libqt5opengl5-dev amd64 5.11.3+dfsg1-1+deb10u4 [64.0 kB] Get: 303 http://deb.debian.org/debian buster/main amd64 libsm-dev amd64 2:1.2.3-1 [38.0 kB] Get: 304 http://deb.debian.org/debian buster/main amd64 libxt-dev amd64 1:1.1.5-1+b3 [426 kB] Get: 305 http://deb.debian.org/debian buster/main amd64 libxmu-headers all 2:1.1.2-2 [51.9 kB] Get: 306 http://deb.debian.org/debian buster/main amd64 libxmu-dev amd64 2:1.1.2-2+b3 [66.3 kB] Get: 307 http://deb.debian.org/debian buster/main amd64 libqglviewer-dev-qt5 amd64 2.6.3+dfsg2-3 [8808 B] Get: 308 http://deb.debian.org/debian buster/main amd64 libtbb2 amd64 2018~U6-4 [147 kB] Get: 309 http://deb.debian.org/debian buster/main amd64 libtbb-dev amd64 2018~U6-4 [286 kB] Get: 310 http://deb.debian.org/debian buster/main amd64 python-matplotlib-data all 3.0.2-2 [4138 kB] Get: 311 http://deb.debian.org/debian buster/main amd64 python3-all amd64 3.7.3-1 [1068 B] Get: 312 http://deb.debian.org/debian buster/main amd64 python3.7-dev amd64 3.7.3-2+deb10u3 [510 kB] Get: 313 http://deb.debian.org/debian buster/main amd64 python3-dev amd64 3.7.3-1 [1264 B] Get: 314 http://deb.debian.org/debian buster/main amd64 python3-all-dev amd64 3.7.3-1 [1064 B] Get: 315 http://deb.debian.org/debian buster/main amd64 python3-atomicwrites all 1.1.5-2 [6892 B] Get: 316 http://deb.debian.org/debian buster/main amd64 python3-attr all 18.2.0-1 [37.3 kB] Get: 317 http://deb.debian.org/debian buster/main amd64 python3-six all 1.12.0-1 [15.7 kB] Get: 318 http://deb.debian.org/debian buster/main amd64 python3-cycler all 0.10.0-1 [7556 B] Get: 319 http://deb.debian.org/debian buster/main amd64 python3-dateutil all 2.7.3-3 [64.5 kB] Get: 320 http://deb.debian.org/debian buster/main amd64 python3-pkg-resources all 40.8.0-1 [153 kB] Get: 321 http://deb.debian.org/debian buster/main amd64 python3-kiwisolver amd64 1.0.1-2+b1 [65.4 kB] Get: 322 http://deb.debian.org/debian buster/main amd64 python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB] Get: 323 http://deb.debian.org/debian buster/main amd64 python3-numpy amd64 1:1.16.2-1 [2119 kB] Get: 324 http://deb.debian.org/debian buster/main amd64 python3-matplotlib amd64 3.0.2-2 [5353 kB] Get: 325 http://deb.debian.org/debian buster/main amd64 python3-more-itertools all 4.2.0-1 [42.2 kB] Get: 326 http://deb.debian.org/debian buster/main amd64 python3-pluggy all 0.8.0-1 [20.6 kB] Get: 327 http://deb.debian.org/debian buster/main amd64 python3-py all 1.7.0-2 [86.6 kB] Get: 328 http://deb.debian.org/debian buster/main amd64 python3-pytest all 3.10.1-2 [243 kB] Get: 329 http://deb.debian.org/debian buster/main amd64 python3-tk amd64 3.7.3-1 [97.4 kB] Fetched 206 MB in 3s (63.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. 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Setting up libxcb1-dev:amd64 (1.13.1-2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libgbm1:amd64 (18.3.6-2+deb10u1) ... Setting up libboost-thread1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libsm-dev:amd64 (2:1.2.3-1) ... Setting up libdrm-radeon1:amd64 (2.4.97-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libdrm-intel1:amd64 (2.4.97-1) ... Setting up libgl1-mesa-dri:amd64 (18.3.6-2+deb10u1) ... Setting up libx11-dev:amd64 (2:1.6.7-1+deb10u2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libxcb-dri3-dev:amd64 (1.13.1-2) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python3.7-dev (3.7.3-2+deb10u3) ... Setting up libqt5network5:amd64 (5.11.3+dfsg1-1+deb10u4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libinput-bin (1.12.6-2+deb10u1) ... Setting up python3-atomicwrites (1.1.5-2) ... 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Setting up libqt5svg5:amd64 (5.11.3-2) ... Setting up libcgal-qt5-13:amd64 (4.13-1+b2) ... Setting up libglu1-mesa-dev:amd64 (9.0.0-2.1+b3) ... Setting up qtbase5-dev:amd64 (5.11.3+dfsg1-1+deb10u4) ... Setting up libqt5opengl5-dev:amd64 (5.11.3+dfsg1-1+deb10u4) ... Setting up libcgal-qt5-dev:amd64 (4.13-1+b2) ... Setting up libqglviewer-dev-qt5 (2.6.3+dfsg2-3) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package hostname: Name or service not known I: Running cd /build/gudhi-2.3.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gudhi_2.3.0+dfsg-2_source.changes dpkg-buildpackage: info: source package gudhi dpkg-buildpackage: info: source version 2.3.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Gard Spreemann dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with=python3 --builddirectory=build dh_auto_clean -O--builddirectory=build dh_autoreconf_clean -O--builddirectory=build dh_clean -O--builddirectory=build for py3ver in ; do \ dh clean --with=python3 --builddirectory=build$py3ver ; \ done debian/rules build dh build --with=python3 --builddirectory=build dh_update_autotools_config -O--builddirectory=build dh_autoreconf -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_auto_configure -- -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DPython_ADDITIONAL_VERSIONS=3.7 cd build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DPython_ADDITIONAL_VERSIONS=3.7 .. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- GUDHI version : 2.3.0 -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Boost version: 1.67.0 -- Found the following Boost libraries: -- system -- filesystem -- unit_test_framework -- program_options -- thread -- chrono -- date_time -- atomic -- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so -- Found GMPXX: /usr/lib/x86_64-linux-gnu/libgmpxx.so -- __cplusplus is 201402 -- --> Do not link with Boost.Thread -- Boost version: 1.67.0 -- Boost include dirs: /usr/include -- Boost libraries: -- CGAL version: 4.13.0. -- Build type: None -- USING CXXFLAGS = '-g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now ' -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Requested component: MPFR -- Requested component: GMPXX -- Requested component: GMP -- Performing Test TBB_without_pthread -- Performing Test TBB_without_pthread - Failed -- Performing Test TBB_with_pthread -- Performing Test TBB_with_pthread - Success -- Found Intel TBB TBB found in /usr/lib/x86_64-linux-gnu -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.3.7", minimum required is "3.1.0") gprof found in /usr/bin/gprof diff found in /usr/bin/diff -- boost include dirs:/usr/include -- boost library dirs:/usr/lib/x86_64-linux-gnu -- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.3") -- Checking to see if CXX compiler accepts flag -Wall -- Checking to see if CXX compiler accepts flag -Wall - yes -- Performing Test GUDHI_CAN_USE_CXX11_THREAD_LOCAL_RESULT -- Performing Test GUDHI_CAN_USE_CXX11_THREAD_LOCAL_RESULT - Success ++ Release compilation flags are: -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -DNDEBUG ++ GUDHI_SUB_DIRECTORIES list is:";benchmark;example;test;utilities" ++ GUDHI_MODULES list is:"common;Alpha_complex;Bitmap_cubical_complex;Bottleneck_distance;Cech_complex;Contraction;Hasse_complex;Persistence_representations;Persistent_cohomology;Rips_complex;Simplex_tree;Skeleton_blocker;Spatial_searching;Subsampling;Tangential_complex;Witness_complex;Nerve_GIC" -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot CMake Warning (dev) at /usr/share/cmake-3.13/Modules/FindOpenGL.cmake:270 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): GudhUI/CMakeLists.txt:4 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Found QGLViewer: /usr/lib/x86_64-linux-gnu/libQGLViewer-qt5.so ++ /usr/bin/python3.7 v.3.7.3 - Cython is 0.29.2 - Sphinx is /usr/bin/python3.7;/build/gudhi-2.3.0+dfsg/cython/doc/python3-sphinx-build.py -- Performing Test CGAL_CAN_USE_CXX11_THREAD_LOCAL_RESULT -- Performing Test CGAL_CAN_USE_CXX11_THREAD_LOCAL_RESULT - Success ++ /usr//lib/x86_64-linux-gnu/libCGAL.so => UNIX_LIB_FILE_NAME = CGAL ++ /usr/lib/x86_64-linux-gnu/libboost_system.so => UNIX_LIB_FILE_NAME = boost_system ++ /usr/lib/x86_64-linux-gnu/libgmp.so => UNIX_LIB_FILE_NAME = gmp ++ /usr/lib/x86_64-linux-gnu/libgmpxx.so => UNIX_LIB_FILE_NAME = gmpxx ++ /usr/lib/x86_64-linux-gnu/libtbb.so => UNIX_LIB_FILE_NAME = tbb ++ /usr/lib/x86_64-linux-gnu/libtbbmalloc.so => UNIX_LIB_FILE_NAME = tbbmalloc ++ make install will install GUDHI in the following directory : /usr -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/gudhi-2.3.0+dfsg/build for py3ver in ; do \ dh_auto_configure --builddirectory=build$py3ver -- -DWITH_GUDHI_BENCHMARK=false -DWITH_GUDHI_EXAMPLE=false -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=false -DPython_ADDITIONAL_VERSIONS=$py3ver ; \ done make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_auto_build --builddirectory=build cd build && make -j16 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -S/build/gudhi-2.3.0+dfsg -B/build/gudhi-2.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles /build/gudhi-2.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_3D_off_reader.dir/DependInfo.cmake --color= make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/common /build/gudhi-2.3.0+dfsg/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/depend Scanning dependencies of target cgal_3D_off_reader make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/depend Scanning dependencies of target vector_double_off_reader Scanning dependencies of target cgal_off_reader Scanning dependencies of target off_file_from_shape_generator Scanning dependencies of target Alpha_complex_example_from_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build Scanning dependencies of target Alpha_complex_example_from_points make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target exact_alpha_complex_3d_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 0%] Building CXX object example/common/CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o Scanning dependencies of target weighted_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -c /build/gudhi-2.3.0+dfsg/example/common/example_CGAL_points_off_reader.cpp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build [ 1%] Building CXX object example/common/CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -c /build/gudhi-2.3.0+dfsg/example/common/example_CGAL_3D_points_off_reader.cpp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build [ 1%] Building CXX object example/common/CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o [ 2%] Building CXX object utilities/common/CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -c /build/gudhi-2.3.0+dfsg/example/common/example_vector_double_points_off_reader.cpp cd /build/gudhi-2.3.0+dfsg/build/utilities/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/common/off_file_from_shape_generator.cpp make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/depend [ 3%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Alpha_complex/Alpha_complex_from_points.cpp make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= [ 3%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Alpha_complex/Alpha_complex_from_off.cpp make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/depend make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target alpha_complex_3d_persistence [ 3%] Building CXX object utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/exact_alpha_complex_3d_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/exact_alpha_complex_3d_persistence.dir/exact_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/exact_alpha_complex_3d_persistence.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build [ 3%] Building CXX object utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/weighted_alpha_complex_3d_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/weighted_alpha_complex_3d_persistence.dir/weighted_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_alpha_complex_3d_persistence.cpp make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/depend Scanning dependencies of target alpha_complex_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend Scanning dependencies of target weighted_periodic_alpha_complex_3d_persistence Scanning dependencies of target periodic_alpha_complex_3d_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 3%] Building CXX object utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp Scanning dependencies of target Random_bitmap_cubical_complex make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build Scanning dependencies of target periodic_cubical_complex_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 3%] Building CXX object utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_persistence.cpp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= Scanning dependencies of target cubical_complex_persistence [ 3%] Building CXX object utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/weighted_periodic_alpha_complex_3d_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/weighted_periodic_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 4%] Building CXX object utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/periodic_alpha_complex_3d_persistence.cpp.o make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/periodic_alpha_complex_3d_persistence.dir/periodic_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/periodic_alpha_complex_3d_persistence.cpp [ 5%] Building CXX object example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex/Random_bitmap_cubical_complex.cpp [ 6%] Building CXX object utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp [ 7%] Building CXX object utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp Scanning dependencies of target alpha_rips_persistence_bottleneck_distance make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 7%] Building CXX object example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance/alpha_rips_persistence_bottleneck_distance.cpp [ 8%] Linking CXX executable vector_double_off_reader cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/vector_double_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -o vector_double_off_reader -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 8%] Built target vector_double_off_reader make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= Scanning dependencies of target bottleneck_basic_example make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 9%] Building CXX object example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance/bottleneck_basic_example.cpp [ 9%] Linking CXX executable cgal_3D_off_reader cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgal_3D_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -o cgal_3D_off_reader -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 9%] Built target cgal_3D_off_reader make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= Scanning dependencies of target bottleneck_distance make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 10%] Building CXX object utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance/bottleneck_distance.cpp [ 11%] Linking CXX executable cgal_off_reader cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgal_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -o cgal_off_reader -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 11%] Built target cgal_off_reader make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= Scanning dependencies of target Cech_complex_example_from_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 12%] Building CXX object example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Cech_complex/cech_complex_example_from_points.cpp [ 12%] Linking CXX executable periodic_cubical_complex_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/periodic_cubical_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -o periodic_cubical_complex_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 12%] Linking CXX executable off_file_from_shape_generator cd /build/gudhi-2.3.0+dfsg/build/utilities/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/off_file_from_shape_generator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -o off_file_from_shape_generator -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 12%] Built target off_file_from_shape_generator make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/DependInfo.cmake --color= [ 12%] Built target periodic_cubical_complex_persistence make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target Cech_complex_example_step_by_step make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target cech_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build [ 13%] Building CXX object example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/cech_complex_step_by_step.cpp.o make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Cech_complex_example_step_by_step.dir/cech_complex_step_by_step.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Cech_complex/cech_complex_step_by_step.cpp [ 14%] Building CXX object utilities/Cech_complex/CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Cech_complex/cech_persistence.cpp [ 14%] Linking CXX executable Random_bitmap_cubical_complex cd /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Random_bitmap_cubical_complex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -o Random_bitmap_cubical_complex -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target Random_bitmap_cubical_complex make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= Scanning dependencies of target GarlandHeckbert make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Building CXX object example/Contraction/CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp [ 14%] Linking CXX executable cubical_complex_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/cubical_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -o cubical_complex_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target cubical_complex_persistence make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= Scanning dependencies of target RipsContraction make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Contraction/CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp [ 15%] Linking CXX executable bottleneck_basic_example cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/bottleneck_basic_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -o bottleneck_basic_example -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Built target bottleneck_basic_example make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_landscape make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_landscape.cpp [ 15%] Linking CXX executable bottleneck_distance cd /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -o bottleneck_distance -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Built target bottleneck_distance make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_landscape_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_landscape_on_grid.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = Point_d; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:46:23: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:69:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:47:9: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:69:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = Point_d; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:46:23: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:69:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:440:16: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::update_edges_after_contraction(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:371:3: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:456:5: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Gudhi::contraction::Skeleton_blocker_contractor::Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >; EdgeProfile = Gudhi::contraction::Edge_profile > >; Gudhi::contraction::Skeleton_blocker_contractor::Profile = Gudhi::contraction::Edge_profile > >; Gudhi::contraction::Skeleton_blocker_contractor::Placement_type = boost::optional; typename EdgeProfile::Point = Point_d]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:352:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >; EdgeProfile = Gudhi::contraction::Edge_profile > >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:82:29: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:30: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Garland_heckbert_traits::Garland_heckbert_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:121:33: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Garland_heckbert_traits::Garland_heckbert_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = Point_d; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:124:45: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Linking CXX executable Cech_complex_example_from_points cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cech_complex_example_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -o Cech_complex_example_from_points -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:359:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:456:5: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Gudhi::contraction::Skeleton_blocker_contractor::Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Profile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Placement_type = boost::optional; typename EdgeProfile::Point = Point_d]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:352:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:175:45: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:440:16: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::update_edges_after_contraction(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:371:3: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:456:5: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Gudhi::contraction::Skeleton_blocker_contractor::Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Profile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Placement_type = boost::optional; typename EdgeProfile::Point = Point_d]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:352:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:175:45: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Built target Cech_complex_example_from_points make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_vectors.cpp In file included from /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_vectors.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_vectorization' may be used uninitialized in this function [-Wmaybe-uninitialized] class Vector_distances_in_diagram { ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_projections_to_reals' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::where_to_cut' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 16%] Linking CXX executable Persistence_representations_example_landscape cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_landscape.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -o Persistence_representations_example_landscape -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Linking CXX executable Persistence_representations_example_vectors cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_vectors.dir/link.txt --verbose=1 [ 16%] Built target Persistence_representations_example_landscape make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -o Persistence_representations_example_vectors -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= [ 16%] Linking CXX executable Cech_complex_example_step_by_step cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cech_complex_example_step_by_step.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Cech_complex_example_step_by_step.dir/cech_complex_step_by_step.cpp.o -o Cech_complex_example_step_by_step -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp Scanning dependencies of target Persistence_representations_example_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_heat_maps.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Built target Persistence_representations_example_vectors make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_intervals make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_intervals.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Built target Cech_complex_example_step_by_step make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 17%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp [ 18%] Linking CXX executable Persistence_representations_example_landscape_on_grid cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -o Persistence_representations_example_landscape_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 18%] Built target Persistence_representations_example_landscape_on_grid make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= Scanning dependencies of target compute_distance_of_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 18%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp [ 18%] Linking CXX executable RipsContraction cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/cmake -E cmake_link_script CMakeFiles/RipsContraction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -o RipsContraction -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 18%] Built target RipsContraction make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= Scanning dependencies of target create_pssk make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 19%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/create_pssk.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_pssk.dir/create_pssk.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp [ 19%] Linking CXX executable cech_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/cech_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -o cech_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 20%] Linking CXX executable compute_distance_of_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -o compute_distance_of_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 20%] Built target cech_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= [ 21%] Linking CXX executable Persistence_representations_example_heat_maps cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_heat_maps.dir/link.txt --verbose=1 Scanning dependencies of target average_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -o Persistence_representations_example_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 21%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp [ 21%] Linking CXX executable compute_scalar_product_of_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -o compute_scalar_product_of_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Built target compute_distance_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= Scanning dependencies of target create_p_h_m_weighted_by_distance_from_diagonal make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Built target Persistence_representations_example_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target create_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Built target compute_scalar_product_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= [ 21%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp Scanning dependencies of target create_p_h_m_weighted_by_arctan_of_their_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp [ 22%] Linking CXX executable Persistence_representations_example_intervals cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -o Persistence_representations_example_intervals -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 22%] Built target Persistence_representations_example_intervals make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= Scanning dependencies of target create_p_h_m_weighted_by_squared_diag_distance make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 22%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp [ 22%] Linking CXX executable create_pssk cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_pssk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_pssk.dir/create_pssk.cpp.o -o create_pssk -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 22%] Built target create_pssk make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= Scanning dependencies of target plot_persistence_heat_map make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 22%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp [ 23%] Linking CXX executable create_p_h_m_weighted_by_distance_from_diagonal cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -o create_p_h_m_weighted_by_distance_from_diagonal -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 24%] Linking CXX executable create_p_h_m_weighted_by_arctan_of_their_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -o create_p_h_m_weighted_by_arctan_of_their_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 25%] Linking CXX executable create_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_persistence_heat_maps.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -o create_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 25%] Built target create_p_h_m_weighted_by_distance_from_diagonal make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 25%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence Scanning dependencies of target plot_histogram_of_intervals_lengths make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target plot_persistence_Betti_numbers [ 25%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp [ 25%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 25%] Built target create_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= Scanning dependencies of target plot_persistence_intervals make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 25%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp [ 25%] Linking CXX executable average_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -o average_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 26%] Linking CXX executable GarlandHeckbert cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/cmake -E cmake_link_script CMakeFiles/GarlandHeckbert.dir/link.txt --verbose=1 [ 26%] Built target average_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -o GarlandHeckbert -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp Scanning dependencies of target compute_birth_death_range_in_persistence_diagram make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 26%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 26%] Built target GarlandHeckbert make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= Scanning dependencies of target compute_number_of_dominant_intervals make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 27%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp [ 28%] Linking CXX executable create_p_h_m_weighted_by_squared_diag_distance cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -o create_p_h_m_weighted_by_squared_diag_distance -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 28%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= Scanning dependencies of target compute_bottleneck_distance make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 28%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp [ 29%] Linking CXX executable plot_persistence_heat_map cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_heat_map.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -o plot_persistence_heat_map -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target plot_persistence_heat_map make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target plot_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp [ 29%] Linking CXX executable exact_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/exact_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/exact_alpha_complex_3d_persistence.dir/exact_alpha_complex_3d_persistence.cpp.o -o exact_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target exact_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target create_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp [ 30%] Linking CXX executable plot_persistence_Betti_numbers cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_Betti_numbers.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -o plot_persistence_Betti_numbers -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 30%] Built target plot_persistence_Betti_numbers make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 31%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp [ 32%] Linking CXX executable plot_histogram_of_intervals_lengths cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_histogram_of_intervals_lengths.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -o plot_histogram_of_intervals_lengths -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 32%] Built target plot_histogram_of_intervals_lengths make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target average_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 32%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp [ 32%] Linking CXX executable plot_persistence_intervals cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -o plot_persistence_intervals -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Linking CXX executable compute_birth_death_range_in_persistence_diagram cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/link.txt --verbose=1 [ 33%] Built target plot_persistence_intervals make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -o compute_birth_death_range_in_persistence_diagram -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target compute_distance_of_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp [ 33%] Linking CXX executable compute_number_of_dominant_intervals cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_number_of_dominant_intervals.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -o compute_number_of_dominant_intervals -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 33%] Built target compute_birth_death_range_in_persistence_diagram make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target plot_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Built target compute_number_of_dominant_intervals make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target average_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp [ 34%] Linking CXX executable plot_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -o plot_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 34%] Built target plot_landscapes make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target compute_distance_of_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 34%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp [ 35%] Linking CXX executable create_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -o create_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 36%] Linking CXX executable weighted_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/weighted_alpha_complex_3d_persistence.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/weighted_alpha_complex_3d_persistence.dir/weighted_alpha_complex_3d_persistence.cpp.o -o weighted_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 36%] Built target create_landscapes make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 37%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 37%] Built target weighted_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target create_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 37%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp [ 37%] Linking CXX executable compute_scalar_product_of_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -o compute_scalar_product_of_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 38%] Linking CXX executable plot_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_landscapes_on_grid.dir/link.txt --verbose=1 [ 39%] Linking CXX executable average_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_landscapes_on_grid.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -o plot_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -o average_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 39%] Built target compute_scalar_product_of_landscapes make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target create_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 39%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 39%] Built target average_landscapes_on_grid make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 39%] Built target plot_landscapes_on_grid Scanning dependencies of target average_persistence_vectors make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target compute_distance_of_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 40%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp [ 40%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp [ 41%] Linking CXX executable average_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -o average_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 41%] Built target average_landscapes make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target plot_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 42%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp [ 43%] Linking CXX executable compute_distance_of_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -o compute_distance_of_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 43%] Built target compute_distance_of_landscapes make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 44%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp [ 44%] Linking CXX executable periodic_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/periodic_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/periodic_alpha_complex_3d_persistence.dir/periodic_alpha_complex_3d_persistence.cpp.o -o periodic_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp In file included from /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_vectorization' may be used uninitialized in this function [-Wmaybe-uninitialized] class Vector_distances_in_diagram { ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_projections_to_reals' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::where_to_cut' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 45%] Linking CXX executable compute_distance_of_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -o compute_distance_of_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 45%] Linking CXX executable average_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_persistence_vectors.dir/link.txt --verbose=1 [ 45%] Built target compute_distance_of_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= [ 46%] Linking CXX executable create_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_landscapes_on_grid.dir/link.txt --verbose=1 Scanning dependencies of target persistence_from_simple_simplex_tree make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -o average_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -o create_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 47%] Building CXX object example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/persistence_from_simple_simplex_tree.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 47%] Built target average_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 48%] Linking CXX executable compute_bottleneck_distance cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_bottleneck_distance.dir/link.txt --verbose=1 Scanning dependencies of target rips_multifield_persistence [ 48%] Built target create_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -o compute_bottleneck_distance -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 50%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/rips_multifield_persistence.cpp Scanning dependencies of target plain_homology [ 50%] Linking CXX executable compute_scalar_product_of_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -o compute_scalar_product_of_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 51%] Building CXX object example/Persistent_cohomology/CMakeFiles/plain_homology.dir/plain_homology.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plain_homology.dir/plain_homology.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/plain_homology.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 51%] Built target periodic_alpha_complex_3d_persistence make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target custom_persistence_sort make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 51%] Built target compute_scalar_product_of_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= [ 52%] Building CXX object example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/custom_persistence_sort.cpp Scanning dependencies of target rips_persistence_step_by_step make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 53%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/rips_persistence_step_by_step.cpp [ 53%] Built target compute_bottleneck_distance make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target rips_persistence_via_boundary_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 53%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/rips_persistence_via_boundary_matrix.cpp [ 53%] Linking CXX executable create_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -o create_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 53%] Linking CXX executable compute_distance_of_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -o compute_distance_of_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 53%] Built target create_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= Scanning dependencies of target persistence_from_file make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 54%] Building CXX object example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/persistence_from_file.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 54%] Built target compute_distance_of_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_one_skeleton_from_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_one_skeleton_rips_from_points.cpp [ 55%] Linking CXX executable compute_scalar_product_of_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -o compute_scalar_product_of_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Built target compute_scalar_product_of_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_from_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 56%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_rips_complex_from_off_file.cpp [ 56%] Linking CXX executable plot_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -o plot_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 56%] Built target plot_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_from_csv_distance_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 57%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp [ 58%] Linking CXX executable weighted_periodic_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/weighted_periodic_alpha_complex_3d_persistence.cpp.o -o weighted_periodic_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 58%] Built target weighted_periodic_alpha_complex_3d_persistence make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_one_skeleton_from_distance_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp [ 59%] Linking CXX executable Alpha_complex_example_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -o Alpha_complex_example_from_off -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Built target Alpha_complex_example_from_off make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_sparse make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_sparse_rips.cpp [ 59%] Linking CXX executable Rips_complex_example_from_csv_distance_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -o Rips_complex_example_from_csv_distance_matrix -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Built target Rips_complex_example_from_csv_distance_matrix make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp [ 59%] Linking CXX executable Rips_complex_example_one_skeleton_from_points cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -o Rips_complex_example_one_skeleton_from_points -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 59%] Linking CXX executable persistence_from_simple_simplex_tree cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/persistence_from_simple_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -o persistence_from_simple_simplex_tree -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Built target Rips_complex_example_one_skeleton_from_points make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target rips_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 60%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_persistence.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 60%] Built target persistence_from_simple_simplex_tree make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target rips_distance_matrix_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_distance_matrix_persistence.cpp [ 61%] Linking CXX executable Rips_complex_example_one_skeleton_from_distance_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -o Rips_complex_example_one_skeleton_from_distance_matrix -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Built target Rips_complex_example_one_skeleton_from_distance_matrix make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target rips_correlation_matrix_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp [ 62%] Linking CXX executable Rips_complex_example_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -o Rips_complex_example_from_off -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Built target Rips_complex_example_from_off make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target sparse_rips_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Linking CXX executable plain_homology cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/plain_homology.dir/link.txt --verbose=1 [ 62%] Building CXX object utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/sparse_rips_persistence.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plain_homology.dir/plain_homology.cpp.o -o plain_homology -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Built target plain_homology make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_graph_expansion_with_blocker make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/graph_expansion_with_blocker.cpp [ 62%] Linking CXX executable persistence_from_file cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/persistence_from_file.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -o persistence_from_file -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Built target persistence_from_file make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_simple_simplex_tree make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 63%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/simple_simplex_tree.cpp [ 64%] Linking CXX executable Rips_complex_example_sparse cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_sparse.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -o Rips_complex_example_sparse -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 64%] Built target Rips_complex_example_sparse make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_mini_simplex_tree make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/mini_simplex_tree.cpp [ 65%] Linking CXX executable rips_multifield_persistence cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_multifield_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -o rips_multifield_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -lgmpxx -lgmp -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp -lgmpxx -lgmp [ 65%] Linking CXX executable rips_persistence_step_by_step cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence_step_by_step.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -o rips_persistence_step_by_step -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Built target rips_multifield_persistence make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_alpha_shapes_3_from_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o [ 65%] Built target rips_persistence_step_by_step make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/example_alpha_shapes_3_simplex_tree_from_off_file.cpp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_from_cliques_of_graph make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/simplex_tree_from_cliques_of_graph.cpp [ 66%] Linking CXX executable rips_persistence_via_boundary_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence_via_boundary_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -o rips_persistence_via_boundary_matrix -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Built target rips_persistence_via_boundary_matrix make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/cech_complex_cgal_mini_sphere_3d.cpp [ 67%] Linking CXX executable alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -o alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 68%] Linking CXX executable Rips_complex_example_one_skeleton_rips_from_correlation_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -o Rips_complex_example_one_skeleton_rips_from_correlation_matrix -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 68%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= Scanning dependencies of target Skeleton_blocker_example_iteration make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 69%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 69%] Built target alpha_complex_3d_persistence make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= Scanning dependencies of target Skeleton_blocker_example_from_simplices make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 70%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp [ 70%] Linking CXX executable Simplex_tree_example_graph_expansion_with_blocker cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -o Simplex_tree_example_graph_expansion_with_blocker -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 70%] Built target Simplex_tree_example_graph_expansion_with_blocker make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= Scanning dependencies of target Skeleton_blocker_example_link make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 71%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp [ 72%] Linking CXX executable alpha_complex_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -o alpha_complex_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:41:24: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:44:75: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:579:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:44:75: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 72%] Built target alpha_complex_persistence make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= Scanning dependencies of target Spatial_searching_example_spatial_searching /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:81:14: required from 'Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Simplex_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Link = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior >; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:239:75: required from 'Gudhi::skeleton_blocker::Simplex_iterator::Simplex_iterator(const Complex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1448:32: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::complex_simplex_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range = boost::iterator_range > >]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:73:58: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Building CXX object example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Spatial_searching/example_spatial_searching.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:208:31: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:188:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:66:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:211:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:188:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:66:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:58:110: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:579:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:211:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:188:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:66:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:169:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(size_t, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; size_t = long unsigned int; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:41:11: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Linking CXX executable Simplex_tree_example_simple_simplex_tree cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -o Simplex_tree_example_simple_simplex_tree -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 73%] Linking CXX executable Simplex_tree_example_mini_simplex_tree cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -o Simplex_tree_example_mini_simplex_tree -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:81:14: required from 'Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Simplex_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Link = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior >; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:239:75: required from 'Gudhi::skeleton_blocker::Simplex_iterator::Simplex_iterator(const Complex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1448:32: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::complex_simplex_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range = boost::iterator_range > >]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:51:58: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Built target Simplex_tree_example_simple_simplex_tree make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_pick_n_random_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_pick_n_random_points.cpp [ 73%] Built target Simplex_tree_example_mini_simplex_tree make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_custom_kernel make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/example_custom_kernel.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_custom_kernel.dir/example_custom_kernel.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_custom_kernel.cpp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:558:10: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:569:9: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge(const Simplex&) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:222:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_simplex(const Simplex&) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:45:34: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:77:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:906:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Link_complex Gudhi::skeleton_blocker::Skeleton_blocker_complex::link(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Link_complex = Gudhi::skeleton_blocker::Skeleton_blocker_link_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:50:44: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Linking CXX executable rips_distance_matrix_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_distance_matrix_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -o rips_distance_matrix_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Built target rips_distance_matrix_persistence make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_sparsify_point_set make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_sparsify_point_set.cpp [ 73%] Linking CXX executable rips_correlation_matrix_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_correlation_matrix_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -o rips_correlation_matrix_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_system -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Built target rips_correlation_matrix_persistence make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_choose_n_farthest_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_choose_n_farthest_points.cpp [ 74%] Linking CXX executable Simplex_tree_example_from_cliques_of_graph cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -o Simplex_tree_example_from_cliques_of_graph -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Built target Simplex_tree_example_from_cliques_of_graph make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= [ 74%] Linking CXX executable rips_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -o rips_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp Scanning dependencies of target Tangential_complex_example_basic make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_basic.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Built target rips_persistence make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= Scanning dependencies of target Tangential_complex_example_with_perturb make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_with_perturb.cpp [ 75%] Linking CXX executable alpha_rips_persistence_bottleneck_distance cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -o alpha_rips_persistence_bottleneck_distance -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 76%] Linking CXX executable sparse_rips_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/sparse_rips_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -o sparse_rips_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 76%] Built target sparse_rips_persistence make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_example_sphere make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 77%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_witness_complex_sphere.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 77%] Built target alpha_rips_persistence_bottleneck_distance make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_example_strong_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 78%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_strong_witness_complex_off.cpp [ 79%] Linking CXX executable Subsampling_example_custom_kernel cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_custom_kernel.dir/example_custom_kernel.cpp.o -o Subsampling_example_custom_kernel -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 79%] Built target Subsampling_example_custom_kernel make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_example_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 80%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_witness_complex_off.cpp [ 80%] Linking CXX executable Alpha_complex_example_from_points cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -o Alpha_complex_example_from_points -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 80%] Linking CXX executable Skeleton_blocker_example_iteration cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_iteration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -o Skeleton_blocker_example_iteration -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 80%] Linking CXX executable Skeleton_blocker_example_from_simplices cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_from_simplices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -o Skeleton_blocker_example_from_simplices -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 80%] Built target Skeleton_blocker_example_iteration make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_example_nearest_landmark_table make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 81%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_nearest_landmark_table.cpp [ 81%] Built target Skeleton_blocker_example_from_simplices make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_weak_witness_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 81%] Building CXX object utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/weak_witness_persistence.cpp [ 82%] Linking CXX executable Subsampling_example_pick_n_random_points [ 82%] Linking CXX executable Skeleton_blocker_example_link cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_link.dir/link.txt --verbose=1 cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_pick_n_random_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -o Skeleton_blocker_example_link -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -o Subsampling_example_pick_n_random_points -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 82%] Built target Subsampling_example_pick_n_random_points make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target Witness_complex_strong_witness_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build [ 82%] Built target Skeleton_blocker_example_link make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= [ 83%] Building CXX object utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/strong_witness_persistence.cpp Scanning dependencies of target FuncGIC make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 84%] Building CXX object example/Nerve_GIC/CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Nerve_GIC/FuncGIC.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 84%] Built target Alpha_complex_example_from_points make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= Scanning dependencies of target CoordGIC make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 85%] Building CXX object example/Nerve_GIC/CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Nerve_GIC/CoordGIC.cpp [ 86%] Linking CXX executable Subsampling_example_choose_n_farthest_points cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -o Subsampling_example_choose_n_farthest_points -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 86%] Built target Subsampling_example_choose_n_farthest_points make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= Scanning dependencies of target VoronoiGIC make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Building CXX object utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/VoronoiGIC.cpp [ 88%] Linking CXX executable Simplex_tree_example_cech_complex_cgal_mini_sphere_3d cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -o Simplex_tree_example_cech_complex_cgal_mini_sphere_3d -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp In file included from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:28, from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:27, from /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_with_perturb.cpp:1: /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h: In member function 'void Gudhi::tangential_complex::internal::Simplicial_complex::collapse(int, bool)': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:166:37: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(it_Cf->size() == max_simplex_dim + 1, ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 88%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= Scanning dependencies of target Nerve make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 88%] Building CXX object utilities/Nerve_GIC/CMakeFiles/Nerve.dir/Nerve.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Nerve.dir/Nerve.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/Nerve.cpp In file included from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:28, from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:27, from /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_basic.cpp:1: /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h: In member function 'void Gudhi::tangential_complex::internal::Simplicial_complex::collapse(int, bool)': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:166:37: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(it_Cf->size() == max_simplex_dim + 1, ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ [ 89%] Linking CXX executable Subsampling_example_sparsify_point_set cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_sparsify_point_set.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -o Subsampling_example_sparsify_point_set -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 89%] Linking CXX executable Spatial_searching_example_spatial_searching cd /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spatial_searching_example_spatial_searching.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -o Spatial_searching_example_spatial_searching -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Built target Subsampling_example_sparsify_point_set make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GudhUI_autogen make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.cmake None AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp" The file includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp" The file includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp" The file includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp" The file includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp" The file includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp" The file includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp" The file includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. [ 89%] Built target Spatial_searching_example_spatial_searching make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/cython /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/cython /build/gudhi-2.3.0+dfsg/build/cython/CMakeFiles/cython.dir/DependInfo.cmake --color= Scanning dependencies of target cython make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Generating gudhi.so cd /build/gudhi-2.3.0+dfsg/build/cython && /usr/bin/python3.7 /build/gudhi-2.3.0+dfsg/build/cython/setup.py build_ext --inplace AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp:0: Note: No relevant classes found. No output generated. /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h: In instantiation of 'void Gudhi::tangential_complex::Tangential_complex::update_star(std::size_t) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1130:5: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangent_triangulation(std::size_t, bool) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]' /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:360:57: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangential_complex() [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]' /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_with_perturb.cpp:43:33: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1160:43: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(incident_simplex.size() == cur_dim_plus_1 - 1, /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h: In instantiation of 'void Gudhi::tangential_complex::Tangential_complex::update_star(std::size_t) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1130:5: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangent_triangulation(std::size_t, bool) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]' /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:360:57: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangential_complex() [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]' /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_basic.cpp:36:33: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1160:43: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(incident_simplex.size() == cur_dim_plus_1 - 1, /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ Compiling /build/gudhi-2.3.0+dfsg/build/cython/gudhi.pyx because it changed. [1/1] Cythonizing /build/gudhi-2.3.0+dfsg/build/cython/gudhi.pyx running build_ext building 'gudhi' extension creating build creating build/temp.linux-x86_64-3.7 creating build/temp.linux-x86_64-3.7/build creating build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg creating build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build creating build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/x86_64-linux-gnu -I/usr/include -I/usr/include -I/usr/include -I/usr/include/x86_64-linux-gnu -I/build/gudhi-2.3.0+dfsg/build -I/usr/include -I/usr/include -I/usr/include/eigen3 -I/usr/include -I/build/gudhi-2.3.0+dfsg/include -I/build/gudhi-2.3.0+dfsg/cython/include -I/usr/include -I/usr/include/python3.7m -c /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp -o build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython/gudhi.o -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++11 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DGUDHI_USE_TBB -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp:0: Note: No relevant classes found. No output generated. [ 90%] Linking CXX executable Simplex_tree_example_alpha_shapes_3_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -o Simplex_tree_example_alpha_shapes_3_from_off -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp:0: Note: No relevant classes found. No output generated. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 90%] Built target Simplex_tree_example_alpha_shapes_3_from_off AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp:0: Note: No relevant classes found. No output generated. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 90%] Built target GudhUI_autogen make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= Scanning dependencies of target GudhUI make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 90%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/gudhui.cpp [ 91%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp [ 91%] Linking CXX executable Witness_complex_example_nearest_landmark_table cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -o Witness_complex_example_nearest_landmark_table -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 91%] Built target Witness_complex_example_nearest_landmark_table [ 91%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp [ 91%] Linking CXX executable Witness_complex_example_sphere cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_sphere.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -o Witness_complex_example_sphere -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 91%] Built target Witness_complex_example_sphere [ 92%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp [ 92%] Linking CXX executable Witness_complex_example_strong_off cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_strong_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -o Witness_complex_example_strong_off -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target Witness_complex_example_strong_off [ 92%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp [ 93%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp [ 93%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp [ 93%] Linking CXX executable Witness_complex_example_off cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -o Witness_complex_example_off -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target Witness_complex_example_off [ 94%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/view/Viewer.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/view/Viewer.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp In file included from /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:722: /build/gudhi-2.3.0+dfsg/cython/include/Alpha_complex_interface.h: In member function 'std::vector Gudhi::alpha_complex::Alpha_complex_interface::get_point(int)': /build/gudhi-2.3.0+dfsg/cython/include/Alpha_complex_interface.h:63:32: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] } catch (std::out_of_range outofrange) { ^~~~~~~~~~ [ 94%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o -c /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp [ 94%] Linking CXX executable FuncGIC cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/FuncGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -o FuncGIC -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 94%] Built target FuncGIC [ 94%] Linking CXX executable VoronoiGIC cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/VoronoiGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -o VoronoiGIC -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 94%] Built target VoronoiGIC In file included from /build/gudhi-2.3.0+dfsg/cython/include/Persistent_cohomology_interface.h:26, from /build/gudhi-2.3.0+dfsg/cython/include/Simplex_tree_interface.h:31, from /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:714: /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h: In instantiation of 'std::vector > Gudhi::persistent_cohomology::Persistent_cohomology::intervals_in_dimension(int) [with FilteredComplex = Gudhi::cubical_complex::Cubical_complex_interface<>; CoefficientField = Gudhi::persistent_cohomology::Field_Zp; typename FilteredComplex::Filtration_value = double]': /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:8023:87: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:710:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] if (cpx_->dimension(get<0>(pair)) == dimension) { /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h: In instantiation of 'std::vector > Gudhi::persistent_cohomology::Persistent_cohomology::intervals_in_dimension(int) [with FilteredComplex = Gudhi::cubical_complex::Cubical_complex_interface >; CoefficientField = Gudhi::persistent_cohomology::Field_Zp; typename FilteredComplex::Filtration_value = double]': /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:9503:87: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:710:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/gudhui.cpp:24: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp:26: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Linking CXX executable Witness_complex_strong_witness_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_strong_witness_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -o Witness_complex_strong_witness_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 94%] Built target Witness_complex_strong_witness_persistence /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.h:36, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:26: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:115:19: required from 'const Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) const [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:55:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:169:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(size_t, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; size_t = long unsigned int; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h:58:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:60:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:140:20: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1391:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:124:47: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:139:11: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:60:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:140:20: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1391:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:124:47: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:60:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:140:20: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1391:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:124:47: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable Witness_complex_weak_witness_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_weak_witness_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -o Witness_complex_weak_witness_persistence -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 95%] Built target Witness_complex_weak_witness_persistence [ 96%] Linking CXX executable Nerve cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/Nerve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Nerve.dir/Nerve.cpp.o -o Nerve -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 96%] Linking CXX executable CoordGIC cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/CoordGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -o CoordGIC -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 96%] Built target Nerve make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 96%] Built target CoordGIC In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/../../../../GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:9, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp:2: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/GudhUI.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o CMakeFiles/GudhUI.dir/view/Viewer.cpp.o CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o -o GudhUI -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.11.3 /usr/lib/x86_64-linux-gnu/libQt5OpenGL.so.5.11.3 -lQGLViewer-qt5 -lGL -lGLU -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.11.3 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.11.3 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.11.3 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 97%] Built target GudhUI [ 98%] Linking CXX executable Tangential_complex_example_basic cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tangential_complex_example_basic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -o Tangential_complex_example_basic -lmpfr -lgmpxx -lgmp /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 /usr/lib/x86_64-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 98%] Built target Tangential_complex_example_basic [ 98%] Linking CXX executable Tangential_complex_example_with_perturb cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tangential_complex_example_with_perturb.dir/link.txt --verbose=1 /usr/bin/c++ 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Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_strong_witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_strong_witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Graph_matching.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Graph_matching.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/graph_simplicial_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/graph_simplicial_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Hasse_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Hasse_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Internal_point.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Internal_point.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Kd_tree_search.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Kd_tree_search.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Miniball.hpp... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Miniball.hpp... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Neighbors_finder.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Neighbors_finder.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Null_output_iterator.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Null_output_iterator.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Off_reader.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Off_reader.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_graph.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_graph.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_heat_maps.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_heat_maps.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals_with_distances.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals_with_distances.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape_on_grid.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape_on_grid.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Field_Zp.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Field_Zp.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Multi_field.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Multi_field.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/pick_n_random_points.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/pick_n_random_points.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Point.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Point.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Points_3D_off_io.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Points_3D_off_io.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Points_off_io.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Points_off_io.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/PSSK.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/PSSK.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/random_point_generators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/random_point_generators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/read_persistence_from_file.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/read_persistence_from_file.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/reader_utils.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/reader_utils.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Rips_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Rips_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simple_object_pool.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simple_object_pool.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/indexing_tag.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/indexing_tag.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_siblings.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_siblings.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Top_faces.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Top_faces.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Trie.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Trie.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Sparse_rips_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Sparse_rips_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/sparsify_point_set.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/sparsify_point_set.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Strong_witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Strong_witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/config.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/config.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/utilities.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/utilities.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Unitary_tests_utils.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Unitary_tests_utils.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex/all_faces_in.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex/all_faces_in.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/writing_persistence_to_file.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/writing_persistence_to_file.h... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_helper.h... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_helper.h... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/exact_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/exact_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/periodic_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/periodic_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance/bottleneck_distance.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance/bottleneck_distance.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Cech_complex/cech_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Cech_complex/cech_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/common/off_file_from_shape_generator.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/common/off_file_from_shape_generator.cpp... Reading /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/KeplerMapperVisuFromTxtFile.py... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/KeplerMapperVisuFromTxtFile.py... Reading /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/km.py... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/km.py... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/Nerve.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/Nerve.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/VoronoiGIC.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/VoronoiGIC.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp... Par/build/gudhi-2.3.0+dfsg/doc/common/examples.h:3: warning: the name `Examples' supplied as the second argument in the \file statement is not an input file /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:158: warning: documented symbol `void MainWindow::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:202: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject MainWindow::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:208: warning: documented symbol `const QMetaObject * MainWindow::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:213: warning: documented symbol `void * MainWindow::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:223: warning: documented symbol `int MainWindow::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:241: warning: documented symbol `void MainWindow::sceneChanged' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:86: warning: documented symbol `void Menu_edge_contraction::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:111: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_edge_contraction::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:117: warning: documented symbol `const QMetaObject * Menu_edge_contraction::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:122: warning: documented symbol `void * Menu_edge_contraction::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:132: warning: documented symbol `int Menu_edge_contraction::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:150: warning: no matching class member found for void Menu_edge_contraction::contract_edges(unsigned _t1) /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:82: warning: documented symbol `void Menu_k_nearest_neighbors::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:106: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_k_nearest_neighbors::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:112: warning: documented symbol `const QMetaObject * Menu_k_nearest_neighbors::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:117: warning: documented symbol `void * Menu_k_nearest_neighbors::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:127: warning: documented symbol `int Menu_k_nearest_neighbors::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:145: warning: documented symbol `void Menu_k_nearest_neighbors::compute_k_nearest_neighbors' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:81: warning: documented symbol `void Menu_persistence::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:104: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_persistence::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:110: warning: documented symbol `const QMetaObject * Menu_persistence::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:115: warning: documented symbol `void * Menu_persistence::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:125: warning: documented symbol `int Menu_persistence::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:143: warning: documented symbol `void Menu_persistence::compute_persistence' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:81: warning: documented symbol `void Menu_uniform_neighbors::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:105: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_uniform_neighbors::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:111: warning: documented symbol `const QMetaObject * Menu_uniform_neighbors::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:116: warning: documented symbol `void * Menu_uniform_neighbors::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:126: warning: documented symbol `int Menu_uniform_neighbors::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:144: warning: documented symbol `void Menu_uniform_neighbors::compute_uniform_neighbors' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:67: warning: documented symbol `void Viewer::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:88: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Viewer::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:94: warning: documented symbol `const QMetaObject * Viewer::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:99: warning: documented symbol `void * Viewer::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:107: warning: documented symbol `int Viewer::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:125: warning: documented symbol `void Viewer::click' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:79: warning: documented symbol `void Viewer_instructor::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:96: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Viewer_instructor::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:102: warning: documented symbol `const QMetaObject * Viewer_instructor::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:107: warning: documented symbol `void * Viewer_instructor::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:115: warning: documented symbol `int Viewer_instructor::qt_metacall' was not declared or defined. error opening bib2289043.bbl: No such file or directory bibtex command failed: No such file or directory error: Problems running bibtex. Verify that the command 'perl --version' works from the command line. Exit code: 2 sing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_distance_matrix_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_distance_matrix_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/sparse_rips_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/sparse_rips_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/strong_witness_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/strong_witness_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/weak_witness_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/weak_witness_persistence.cpp... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Associating documentation with classes... Computing nesting relations for classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Computing dependencies between directories... Generating citations page... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Generating style sheet... Generating search indices... Generating example documentation... Generating docs for example Alpha_complex/alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/Alpha_complex_from_off.cpp... Generating docs for example Alpha_complex/Alpha_complex_from_points.cpp... Generating docs for example Alpha_complex/alpha_complex_persistence.cpp... Generating docs for example Alpha_complex/exact_alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/periodic_alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/weighted_alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp... Generating docs for example Bitmap_cubical_complex/cubical_complex_persistence.cpp... Generating docs for example Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp... Generating docs for example Bitmap_cubical_complex/Random_bitmap_cubical_complex.cpp... Generating docs for example Bottleneck_distance/alpha_rips_persistence_bottleneck_distance.cpp... Generating docs for example Bottleneck_distance/bottleneck_basic_example.cpp... Generating docs for example Bottleneck_distance/bottleneck_distance.cpp... Generating docs for example common/example_CGAL_3D_points_off_reader.cpp... Generating docs for example common/example_CGAL_points_off_reader.cpp... Generating docs for example common/example_vector_double_points_off_reader.cpp... Generating docs for example common/off_file_from_shape_generator.cpp... Generating docs for example Contraction/Garland_heckbert.cpp... Generating docs for example Contraction/Rips_contraction.cpp... Generating docs for example Nerve_GIC/CoordGIC.cpp... Generating docs for example Nerve_GIC/FuncGIC.cpp... Generating docs for example Nerve_GIC/Nerve.cpp... Generating docs for example Nerve_GIC/VoronoiGIC.cpp... Generating docs for example Persistence_representations/persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_pssk.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp... Generating docs for example Persistence_representations/persistence_intervals.cpp... Generating docs for example Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp... Generating docs for example Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp... Generating docs for example Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp... Generating docs for example Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp... Generating docs for example Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp... Generating docs for example Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp... Generating docs for example Persistence_representations/persistence_landscape.cpp... Generating docs for example Persistence_representations/persistence_landscape_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes/average_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/create_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/plot_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/average_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/create_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp... Generating docs for example Persistent_cohomology/custom_persistence_sort.cpp... Generating docs for example Persistent_cohomology/persistence_from_file.cpp... Generating docs for example Persistent_cohomology/persistence_from_simple_simplex_tree.cpp... Generating docs for example Persistent_cohomology/plain_homology.cpp... Generating docs for example Persistent_cohomology/rips_multifield_persistence.cpp... Generating docs for example Persistent_cohomology/rips_persistence_step_by_step.cpp... Generating docs for example Persistent_cohomology/rips_persistence_via_boundary_matrix.cpp... Generating docs for example Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp... Generating docs for example Rips_complex/example_one_skeleton_rips_from_points.cpp... Generating docs for example Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp... Generating docs for example Rips_complex/example_rips_complex_from_off_file.cpp... Generating docs for example Rips_complex/rips_distance_matrix_persistence.cpp... Generating docs for example Rips_complex/rips_persistence.cpp... Generating docs for example Simplex_tree/cech_complex_cgal_mini_sphere_3d.cpp... Generating docs for example Simplex_tree/example_alpha_shapes_3_simplex_tree_from_off_file.cpp... Generating docs for example Simplex_tree/graph_expansion_with_blocker.cpp... Generating docs for example Simplex_tree/mini_simplex_tree.cpp... Generating docs for example Simplex_tree/simple_simplex_tree.cpp... Generating docs for example Simplex_tree/simplex_tree_from_cliques_of_graph.cpp... Generating docs for example Skeleton_blocker/Skeleton_blocker_from_simplices.cpp... Generating docs for example Skeleton_blocker/Skeleton_blocker_iteration.cpp... Generating docs for example Skeleton_blocker/Skeleton_blocker_link.cpp... Generating docs for example Spatial_searching/example_spatial_searching.cpp... Generating docs for example Subsampling/example_choose_n_farthest_points.cpp... Generating docs for example Subsampling/example_custom_kernel.cpp... Generating docs for example Subsampling/example_pick_n_random_points.cpp... Generating docs for example Subsampling/example_sparsify_point_set.cpp... Generating docs for example Tangential_complex/example_basic.cpp... Generating docs for example Tangential_complex/example_with_perturb.cpp... Generating docs for example Witness_complex/example_nearest_landmark_table.cpp... Generating docs for example Witness_complex/example_strong_witness_complex_off.cpp... Generating docs for example Witness_complex/example_witness_complex_off.cpp... Generating docs for example Witness_complex/example_witness_complex_sphere.cpp... Generating docs for example W/build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number itness_complex/strong_witness_persistence.cpp... Generating docs for example Witness_complex/weak_witness_persistence.cpp... Generating file sources... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_KNearestNeighborsMenu.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_main_window.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_MenuEdgeContraction.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_PersistenceMenu.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_UniformNeighborsMenu.h... Generating code for file build/GudhUI/GudhUI_autogen/moc_predefs.h... Generating code for file concept/Alpha_complex/SimplicialComplexForAlpha.h... Generating code for file concept/Bottleneck_distance/Persistence_diagram.h... Generating code for file concept/Cech_complex/SimplicialComplexForCech.h... Generating code for file concept/Persistence_representations/Real_valued_topological_data.h... Generating code for file concept/Persistence_representations/Topological_data_with_averages.h... Generating code for file concept/Persistence_representations/Topological_data_with_distances.h... Generating code for file concept/Persistence_representations/Topological_data_with_scalar_product.h... Generating code for file concept/Persistence_representations/Vectorized_topological_data.h... Generating code for file concept/Persistent_cohomology/CoefficientField.h... Generating code for file concept/Persistent_cohomology/FilteredComplex.h... Generating code for file concept/Persistent_cohomology/PersistentHomology.h... Generating code for file concept/Rips_complex/SimplicialComplexForRips.h... Generating code for file concept/Simplex_tree/FiltrationValue.h... Generating code for file concept/Simplex_tree/IndexingTag.h... Generating code for file concept/Simplex_tree/SimplexKey.h... Generating code for file concept/Simplex_tree/SimplexTreeOptions.h... Generating code for file concept/Simplex_tree/VertexHandle.h... Generating code for file concept/Skeleton_blocker/SkeletonBlockerDS.h... Generating code for file concept/Skeleton_blocker/SkeletonBlockerGeometricDS.h... Generating code for file concept/Witness_complex/SimplicialComplexForWitness.h... Generating code for file cython/include/Alpha_complex_interface.h... Generating code for file cython/include/Bottleneck_distance_interface.h... Generating code for file cython/include/Cubical_complex_interface.h... Generating code for file cython/include/Euclidean_strong_witness_complex_interface.h... Generating code for file cython/include/Euclidean_witness_complex_interface.h... Generating code for file cython/include/Nerve_gic_interface.h... Generating code for file cython/include/Off_reader_interface.h... Generating code for file cython/include/Persistent_cohomology_interface.h... Generating code for file cython/include/Reader_utils_interface.h... Generating code for file cython/include/Rips_complex_interface.h... Generating code for file cython/include/Simplex_tree_interface.h... Generating code for file cython/include/Strong_witness_complex_interface.h... Generating code for file cython/include/Subsampling_interface.h... Generating code for file cython/include/Tangential_complex_interface.h... Generating code for file cython/include/Witness_complex_interface.h... Generating code for file doc/Alpha_complex/Intro_alpha_complex.h... Generating code for file doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h... Generating code for file doc/Bottleneck_distance/Intro_bottleneck_distance.h... Generating code for file doc/Cech_complex/Intro_cech_complex.h... Generating code for file doc/common/examples.h... Generating code for file doc/common/file_formats.h... Generating code for file doc/common/installation.h... Generating code for file doc/common/main_page.h... Generating code for file doc/Nerve_GIC/Intro_graph_induced_complex.h... Generating code for file doc/Persistence_representations/Persistence_representations_doc.h... Generating code for file doc/Persistent_cohomology/Intro_persistent_cohomology.h... Genera/build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:207: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:526: warning: \cite command to 'Carriere17c' does not have an associated number ting code for file doc/Rips_complex/Intro_rips_complex.h... Generating code for file doc/Simplex_tree/Intro_simplex_tree.h... Generating code for file doc/Spatial_searching/Intro_spatial_searching.h... Generating code for file doc/Subsampling/Intro_subsampling.h... Generating code for file doc/Tangential_complex/Intro_tangential_complex.h... Generating code for file doc/Witness_complex/Witness_complex_doc.h... Generating code for file include/gudhi/Active_witness/Active_witness.h... Generating code for file include/gudhi/Active_witness/Active_witness_iterator.h... Generating code for file include/gudhi/allocator.h... Generating code for file include/gudhi/Alpha_complex.h... Generating code for file include/gudhi/Bitmap_cubical_complex.h... Generating code for file include/gudhi/Bitmap_cubical_complex/counter.h... Generating code for file include/gudhi/Bitmap_cubical_complex_base.h... Generating code for file include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h... Generating code for file include/gudhi/Bottleneck.h... Generating code for file include/gudhi/Cech_complex.h... Generating code for file include/gudhi/Cech_complex_blocker.h... Generating code for file include/gudhi/choose_n_farthest_points.h... Generating code for file include/gudhi/Clock.h... Generating code for file include/gudhi/common_persistence_representations.h... Generating code for file include/gudhi/console_color.h... Generating code for file include/gudhi/Contraction/CGAL_queue/Modifiable_priority_queue.h... Generating code for file include/gudhi/Contraction/Edge_profile.h... Generating code for file include/gudhi/Contraction/policies/Contraction_visitor.h... Generating code for file include/gudhi/Contraction/policies/Cost_policy.h... Generating code for file include/gudhi/Contraction/policies/Dummy_valid_contraction.h... Generating code for file include/gudhi/Contraction/policies/Edge_length_cost.h... Generating code for file include/gudhi/Contraction/policies/First_vertex_placement.h... Generating code for file include/gudhi/Contraction/policies/Link_condition_valid_contraction.h... Generating code for file include/gudhi/Contraction/policies/Middle_placement.h... Generating code for file include/gudhi/Contraction/policies/Placement_policy.h... Generating code for file include/gudhi/Contraction/policies/Valid_contraction_policy.h... Generating code for file include/gudhi/Debug_utils.h... Generating code for file include/gudhi/distance_functions.h... Generating code for file include/gudhi/Edge_contraction.h... Generating code for file include/gudhi/Euclidean_strong_witness_complex.h... Generating code for file include/gudhi/Euclidean_witness_complex.h... Generating code for file include/gudhi/GIC.h... Generating code for file include/gudhi/Graph_matching.h... Generating code for file include/gudhi/graph_simplicial_complex.h... Generating code for file include/gudhi/Hasse_complex.h... Generating code for file include/gudhi/Internal_point.h... Generating code for file include/gudhi/Kd_tree_search.h... Generating code for file include/gudhi/Miniball.hpp... Generating code for file include/gudhi/Neighbors_finder.h... Generating code for file include/gudhi/Null_output_iterator.h... Generating code for file include/gudhi/Off_reader.h... Generating code for file include/gudhi/Persistence_graph.h... Generating code for file include/gudhi/Persistence_heat_maps.h... Generating code for file include/gudhi/Persistence_intervals.h... Generating code for file include/gudhi/Persistence_intervals_with_distances.h... Generating code for file include/gudhi/Persistence_landscape.h... Generating code for file include/gudhi/Persistence_landscape_on_grid.h... Generating code for file include/gudhi/Persistence_vectors.h... Generating code for file include/gudhi/Persistent_cohomology.h... Generating code for file include/gudhi/Persistent_cohomology/Field_Zp.h... Generating code for file include/gudhi/Persistent_cohomology/Multi_field.h... Generating code for file include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h... Generating code for fi/build/gudhi-2.3.0+dfsg/doc/common/installation.h:74: warning: \cite command to 'cgal:eb-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h:53: warning: \cite command to 'cgal:hdj-t-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h:54: warning: \cite command to 'cgal:eb-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h:58: warning: \cite command to 'cgal:s-gkd-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h:63: warning: \cite command to 'kaczynski2004computational' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h:64: warning: \cite command to 'peikert2012topological' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Bottleneck.h:111: warning: The following parameters of Gudhi::persistence_diagram::bottleneck_distance(const Persistence_diagram1 &diag1, const Persistence_diagram2 &diag2, double e=(std::numeric_limits< double >::min)()) are not documented: parameter 'diag1' parameter 'diag2' /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h:99: warning: \cite command to 'Dey13' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h:133: warning: \cite command to 'Carriere16' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h:138: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:103: warning: \cite command to 'bubenik_landscapes_2015' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:104: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:133: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:136: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:193: warning: \cite command to 'Fasy_Kim_Lecci_Maria_tda' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:200: warning: \cite command to 'Ferri_Frosini_comparision_sheme_1' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:200: warning: \cite command to 'Ferri_Frosini_comparision_sheme_2' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:201: warning: \cite command to 'Persistence_Images_2017' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:204: warning: \cite command to 'Kusano_Fukumizu_Hiraoka_PWGK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:204: warning: \cite command to 'Reininghaus_Huber_ALL_PSSK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:206: warning: \cite command to 'Kusano_Fukumizu_Hiraoka_PWGK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:208: warning: \cite command to 'Reininghaus_Huber_ALL_PSSK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:234: warning: \cite command to 'Carriere_Oudot_Ovsjanikov_top_signatures_3d' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:36: warning: \cite command to 'DBLP:journals/dcg/SilvaMV11' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:36: warning: \cite command to 'DBLP:journals/corr/abs-1208-5018' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:38: warning: \cite command to 'DBLP:conf/esa/BoissonnatDM13' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:111: warning: \cite command to 'Munkres-elementsalgtop1984' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:112: warning: \cite command to 'DBLP:books/daglib/0025666' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:126: warning: \cite command to 'DBLP:journals/dcg/ZomorodianC05' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:131: warning: \cite command to 'DBLP:journals/focm/CarlssonS10' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:90: warning: \cite command to 'sheehy13linear' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:91: warning: \cite command to 'buchet16efficient' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:96: warning: \cite command to 'cavanna15geometric' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:96: warning: \cite command to 'cavanna15visualizing' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Simplex_tree/Intro_simplex_tree.h:48: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Tangential_complex/Intro_tangential_complex.h:44: warning: \cite command to 'tangentialcomplex2014' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Tangential_complex/Intro_tangential_complex.h:59: warning: \cite command to 'tangentialcomplex2014' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Witness_complex/Witness_complex_doc.h:23: warning: \cite command to 'de2004topological' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Witness_complex/Witness_complex_doc.h:43: warning: \cite command to 'de2004topological' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h:53: warning: \cite command to 'Garland' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h:53: warning: \cite command to 'Lindstrom' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h:81: warning: \cite command to 'Garland' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:48: warning: \cite command to 'socg_blockers_2011' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:48: warning: \cite command to 'blockers2012' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:59: warning: \cite command to 'Munkres-elementsalgtop1984' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:238: warning: \cite command to 'socg_blockers_2011' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:238: warning: \cite command to 'blockers2012' does not have an associated number le include/gudhi/pick_n_random_points.h... Generating code for file include/gudhi/Point.h... Generating code for file include/gudhi/Points_3D_off_io.h... Generating code for file include/gudhi/Points_off_io.h... Generating code for file include/gudhi/PSSK.h... Generating code for file include/gudhi/random_point_generators.h... Generating code for file include/gudhi/read_persistence_from_file.h... Generating code for file include/gudhi/reader_utils.h... Generating code for file include/gudhi/Rips_complex.h... Generating code for file include/gudhi/Simple_object_pool.h... Generating code for file include/gudhi/Simplex_tree.h... Generating code for file include/gudhi/Simplex_tree/indexing_tag.h... Generating code for file include/gudhi/Simplex_tree/Simplex_tree_iterators.h... Generating code for file include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h... Generating code for file include/gudhi/Simplex_tree/Simplex_tree_siblings.h... Generating code for file include/gudhi/Skeleton_blocker.h... Generating code for file include/gudhi/Skeleton_blocker/internal/Top_faces.h... Generating code for file include/gudhi/Skeleton_blocker/internal/Trie.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h... Generating code for file include/gudhi/Skeleton_blocker_complex.h... Generating code for file include/gudhi/Skeleton_blocker_contractor.h... Generating code for file include/gudhi/Skeleton_blocker_geometric_complex.h... Generating code for file include/gudhi/Skeleton_blocker_link_complex.h... Generating code for file include/gudhi/Skeleton_blocker_simplifiable_complex.h... Generating code for file include/gudhi/Sparse_rips_complex.h... Generating code for file include/gudhi/sparsify_point_set.h... Generating code for file include/gudhi/Strong_witness_complex.h... Generating code for file include/gudhi/Tangential_complex.h... Generating code for file include/gudhi/Tangential_complex/config.h... Generating code for file include/gudhi/Tangential_complex/Simplicial_complex.h... Generating code for file include/gudhi/Tangential_complex/utilities.h... Generating code for file include/gudhi/Unitary_tests_utils.h... Generating code for file include/gudhi/Witness_complex.h... Generating code for file include/gudhi/Witness_complex/all_faces_in.h... Generating code for file include/gudhi/writing_persistence_to_file.h... Generating code for file utilities/Alpha_complex/alpha_complex_3d_helper.h... Generating file documentation... Generating docs for file include/gudhi/distance_functions.h... Generating docs for file include/gudhi/reader_utils.h... Generating page documentation... Generating docs for page fileformats... Generating docs for page installation... Generating docs for page Citation... Generating docs for page citelist... Generating group documentation... Generating class documentation... Generating docs for compound Coe/build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree.h:65: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Alpha_complex.h:67: warning: \cite command to 'cgal:s-gkd-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:207: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:526: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:526: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:207: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h:59: warning: \cite command to 'bubenik_landscapes_2015' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h:60: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number fficientField... Generating docs for compound FilteredComplex... Generating docs for compound FiltrationValue... Generating docs for compound IndexingTag... Generating docs for compound PersistentHomology... Generating docs for compound SimplexKey... Generating docs for compound SimplexTreeOptions... Generating docs for compound VertexHandle... Generating namespace index... Generating docs for namespace Gudhi Generating docs for compound Gudhi::Euclidean_distance... Generating docs for compound Gudhi::linear_indexing_tag... Generating docs for compound Gudhi::Minimal_enclosing_ball_radius... Generating docs for compound Gudhi::Null_output_iterator... Generating docs for compound Gudhi::Off_reader... Generating docs for compound Gudhi::Persistence_interval_common... Generating docs for compound Gudhi::Points_3D_off_reader... Generating docs for compound Gudhi::Points_3D_off_visitor_reader... Generating docs for compound Gudhi::Points_off_reader... Generating docs for compound Gudhi::Points_off_visitor_reader... Generating docs for compound Gudhi::Simplex_tree... Generating docs for compound Gudhi::Simplex_tree_options_fast_persistence... Generating docs for compound Gudhi::Simplex_tree_options_full_featured... Generating docs for compound Gudhi::alpha_complex::Alpha_complex... Generating docs for compound Gudhi::alpha_complex::SimplicialComplexForAlpha... Generating docs for compound Gudhi::cech_complex::Cech_complex... Generating docs for compound Gudhi::cech_complex::SimplicialComplexForCech... Generating docs for compound Gudhi::contraction::Contraction_visitor... Generating docs for compound Gudhi::contraction::Contraction_visitor_remove_popable... Generating docs for compound Gudhi::contraction::Cost_policy... Generating docs for compound Gudhi::contraction::Dummy_valid_contraction... Generating docs for compound Gudhi::contraction::Edge_length_cost... Generating docs for compound Gudhi::contraction::First_vertex_placement... Generating docs for compound Gudhi::contraction::Link_condition_valid_contraction... Generating docs for compound Gudhi::contraction::Placement_policy... Generating docs for compound Gudhi::contraction::Skeleton_blocker_contractor... Generating docs for compound Gudhi::contraction::Valid_contraction_policy... Generating docs for compound Gudhi::cover_complex::Cover_complex... Generating docs for compound Gudhi::cubical_complex::Bitmap_cubical_complex... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex::Filtration_simplex_range... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex::Skeleton_simplex_range... Generating docs for compound Gudhi::cubical_complex::Bitmap_cubical_complex_base... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::All_cells_iterator... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::All_cells_range... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::Top_dimensional_cells_iterator... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::Top_dimensional_cells_range... Generating docs for compound Gudhi::cubical_complex::Bitmap_cubical_complex_periodic_boundary_conditions_base... Generating docs for compound Gudhi::cubical_complex::counter... Generating docs for compound Gudhi::persistence_diagram::DiagramPoint... Generating docs for compound Gudhi::persistence_diagram::PersistenceDiagram... Generating docs for compound Gudhi::Persistence_representations::arc_tan_of_persistence_of_point... Generating docs for compound Gudhi::Persistence_representations::constant_scaling_function... Generating docs for compound Gudhi::Persistence_representations::distance_from_diagonal_scaling... Generating docs for compound Gudhi::Persistence_representations::Persistence_heat_maps... Generating docs for compound Gudhi::Persistence_representations::Persistence_intervals... Generating docs for compound Gudhi::Persistence_representations::Persistence_landscape... Generating doc/build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:58: warning: \cite command to 'Carriere_Oudot_Ovsjanikov_top_signatures_3d' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Multi_field.h:38: warning: \cite command to 'boissonnat:hal-00922572' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:53: warning: \cite command to 'DBLP:conf/esa/BoissonnatDM13' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:55: warning: \cite command to 'boissonnat:hal-00922572' does not have an associated number s for compound Gudhi::Persistence_representations::Persistence_landscape_on_grid... Generating docs for compound Gudhi::Persistence_representations::PSSK... Generating docs for compound Gudhi::Persistence_representations::Real_valued_topological_data... Generating docs for compound Gudhi::Persistence_representations::squared_distance_from_diagonal_scaling... Generating docs for compound Gudhi::Persistence_representations::Topological_data_with_averages... Generating docs for compound Gudhi::Persistence_representations::Topological_data_with_distances... Generating docs for compound Gudhi::Persistence_representations::Topological_data_with_scalar_product... Generating docs for compound Gudhi::Persistence_representations::Vector_distances_in_diagram... Generating docs for compound Gudhi::Persistence_representations::Vectorized_topological_data... Generating docs for compound Gudhi::Persistence_representations::weight_by_setting_maximal_interval_to_have_length_one... Generating docs for compound Gudhi::persistent_cohomology::Field_Zp... Generating docs for compound Gudhi::persistent_cohomology::Multi_field... Generating docs for compound Gudhi::persistent_cohomology::Persistent_cohomology... Generating docs for compound Gudhi::rips_complex::Rips_complex... Generating docs for compound Gudhi::rips_complex::SimplicialComplexForRips... Generating docs for compound Gudhi::rips_complex::Sparse_rips_complex... Generating docs for compound Gudhi::skeleton_blocker::Blocker_iterator_around_vertex_internal... Generating docs for compound Gudhi::skeleton_blocker::Blocker_iterator_internal... Generating docs for compound Gudhi::skeleton_blocker::Dummy_complex_visitor... Generating docs for compound Gudhi::skeleton_blocker::Edge_iterator... Generating docs for compound Gudhi::skeleton_blocker::Print_complex_visitor... Generating docs for compound Gudhi::skeleton_blocker::Simplex_around_vertex_iterator... Generating docs for compound Gudhi::skeleton_blocker::Simplex_coboundary_iterator... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_complex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_link_complex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_link_superior... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_off_flag_visitor_reader... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_off_reader... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_off_visitor_reader... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits... Generating docs for nested compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits... Generating docs for nested compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_simplex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_sub_complex... Generating docs for compound Gudhi::skeleton_blocker::SkeletonBlockerDS... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Graph_edge... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Graph_vertex... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Root_vertex_handle... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Vertex_handle... Generating docs for compound Gudhi::skeleton_blocker::SkeletonBlockerGeometricDS... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerGeometricDS::Graph_Edge... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerGeometricDS::Graph_vertex... Generating docs for/build/gudhi-2.3.0+dfsg/doc/common/main_page.h:21: warning: \cite command to 'gudhilibrary_ICMS14' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:107: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:142: warning: \cite command to 'socg_blockers_2011' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:142: warning: \cite command to 'blockers2012' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:183: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:244: warning: \cite command to 'DBLP:journals/dcg/SilvaMV11' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:245: warning: \cite command to 'DBLP:journals/corr/abs-1208-5018' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:246: warning: \cite command to 'DBLP:conf/esa/BoissonnatDM13' does not have an associated number compound Gudhi::skeleton_blocker::Triangle_around_vertex_iterator... Generating docs for compound Gudhi::skeleton_blocker::Triangle_iterator... Generating docs for compound Gudhi::skeleton_blocker::Vertex_iterator... Generating docs for compound Gudhi::spatial_searching::Kd_tree_search... Generating docs for compound Gudhi::tangential_complex::Tangential_complex... Generating docs for nested compound Gudhi::tangential_complex::Tangential_complex::Fix_inconsistencies_info... Generating docs for nested compound Gudhi::tangential_complex::Tangential_complex::Num_inconsistencies... Generating docs for compound Gudhi::witness_complex::Euclidean_strong_witness_complex... Generating docs for compound Gudhi::witness_complex::Euclidean_witness_complex... Generating docs for compound Gudhi::witness_complex::SimplicialComplexForWitness... Generating docs for compound Gudhi::witness_complex::Strong_witness_complex... Generating docs for compound Gudhi::witness_complex::Witness_complex... Generating docs for namespace persistence_graphical_tools Generating docs for namespace python3 Generating graph info page... Generating directory documentation... Generating dependency graph for directory utilities/Bitmap_cubical_complex Generating dependency graph for directory utilities/Bottleneck_distance Generating dependency graph for directory utilities/Cech_complex Generating dependency graph for directory cython Generating dependency graph for directory cython/include Generating dependency graph for directory utilities/Rips_complex Generating dependency graph for directory utilities Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running dot... Generating dot graphs using 17 parallel threads... 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/usr/bin/cmake -S/build/gudhi-2.3.0+dfsg -B/build/gudhi-2.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles /build/gudhi-2.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make -f 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/build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/common /build/gudhi-2.3.0+dfsg/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_3D_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/vector_double_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 1%] Built target cgal_off_reader [ 1%] Built target Alpha_complex_example_from_off [ 2%] Built target cgal_3D_off_reader [ 3%] Built target vector_double_off_reader [ 4%] Built target alpha_complex_persistence [ 5%] Built target off_file_from_shape_generator [ 6%] Built target Alpha_complex_example_from_points [ 6%] Built target exact_alpha_complex_3d_persistence [ 7%] Built target weighted_alpha_complex_3d_persistence [ 8%] Built target alpha_complex_3d_persistence make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend [ 9%] Built target periodic_alpha_complex_3d_persistence [ 10%] Built target Random_bitmap_cubical_complex [ 11%] Built target weighted_periodic_alpha_complex_3d_persistence make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend [ 12%] Built target periodic_cubical_complex_persistence make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= [ 13%] Built target cubical_complex_persistence make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/RipsContraction.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/GarlandHeckbert.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target bottleneck_distance [ 15%] Built target alpha_rips_persistence_bottleneck_distance [ 16%] Built target bottleneck_basic_example [ 17%] Built target Cech_complex_example_from_points [ 18%] Built target Cech_complex_example_step_by_step make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend [ 19%] Built target Persistence_representations_example_landscape make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend [ 20%] Built target RipsContraction make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend [ 22%] Built target cech_persistence [ 22%] Built target GarlandHeckbert make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= [ 23%] Built target Persistence_representations_example_landscape_on_grid make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 24%] Built target Persistence_representations_example_intervals [ 25%] Built target compute_scalar_product_of_persistence_heat_maps [ 26%] Built target compute_distance_of_persistence_heat_maps [ 26%] Built target Persistence_representations_example_vectors [ 27%] Built target Persistence_representations_example_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= [ 28%] Built target create_pssk make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend [ 28%] Built target average_persistence_heat_maps [ 29%] Built target create_persistence_heat_maps make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= [ 30%] Built target create_p_h_m_weighted_by_distance_from_diagonal make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 31%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build [ 32%] Built target plot_histogram_of_intervals_lengths [ 33%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= [ 34%] Built target plot_persistence_heat_map make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 35%] Built target plot_persistence_Betti_numbers make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 36%] Built target compute_birth_death_range_in_persistence_diagram [ 36%] Built target plot_persistence_intervals make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend [ 37%] Built target create_landscapes make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= [ 38%] Built target compute_number_of_dominant_intervals make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= [ 39%] Built target compute_bottleneck_distance make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend [ 40%] Built target plot_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 41%] Built target compute_scalar_product_of_landscapes [ 42%] Built target average_landscapes make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 43%] Built target compute_distance_of_landscapes [ 44%] Built target plot_landscapes_on_grid [ 45%] Built target average_landscapes_on_grid make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend [ 46%] Built target compute_scalar_product_of_landscapes_on_grid [ 47%] Built target compute_distance_of_landscapes_on_grid make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build [ 48%] Built target create_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 48%] Built target create_persistence_vectors [ 50%] Built target average_persistence_vectors [ 50%] Built target compute_distance_of_persistence_vectors [ 51%] Built target plot_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend [ 52%] Built target compute_scalar_product_of_persistence_vectors [ 53%] Built target persistence_from_simple_simplex_tree make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= [ 54%] Built target rips_multifield_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Built target custom_persistence_sort [ 56%] Built target plain_homology make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend [ 57%] Built target rips_persistence_step_by_step make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend [ 58%] Built target rips_persistence_via_boundary_matrix make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= [ 59%] Built target Rips_complex_example_one_skeleton_from_points make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= [ 60%] Built target persistence_from_file make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Built target Rips_complex_example_one_skeleton_from_distance_matrix [ 62%] Built target Rips_complex_example_from_off [ 63%] Built target Rips_complex_example_from_csv_distance_matrix make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend [ 64%] Built target Rips_complex_example_sparse make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend [ 65%] Built target rips_distance_matrix_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend [ 66%] Built target rips_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= [ 67%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build [ 68%] Built target sparse_rips_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 69%] Built target rips_correlation_matrix_persistence make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= [ 70%] Built target Simplex_tree_example_simple_simplex_tree make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= [ 71%] Built target Simplex_tree_example_alpha_shapes_3_from_off [ 72%] Built target Simplex_tree_example_mini_simplex_tree [ 72%] Built target Simplex_tree_example_graph_expansion_with_blocker make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Built target Simplex_tree_example_from_cliques_of_graph make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build [ 74%] Built target Skeleton_blocker_example_iteration make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend [ 75%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= [ 76%] Built target Skeleton_blocker_example_from_simplices make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/depend [ 77%] Built target Skeleton_blocker_example_link make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/DependInfo.cmake --color= [ 78%] Built target Spatial_searching_example_spatial_searching make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 79%] Built target Subsampling_example_pick_n_random_points make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 80%] Built target Subsampling_example_sparsify_point_set [ 81%] Built target Subsampling_example_custom_kernel make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend [ 82%] Built target Subsampling_example_choose_n_farthest_points make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend [ 82%] Built target Tangential_complex_example_with_perturb [ 83%] Built target Tangential_complex_example_basic make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 84%] Built target Witness_complex_example_sphere make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend [ 85%] Built target Witness_complex_example_off [ 86%] Built target Witness_complex_example_strong_off make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend [ 87%] Built target Witness_complex_example_nearest_landmark_table make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend [ 88%] Built target Witness_complex_strong_witness_persistence [ 89%] Built target Witness_complex_weak_witness_persistence make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 90%] Built target FuncGIC make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 91%] Built target CoordGIC make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/depend [ 92%] Built target VoronoiGIC make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/cython /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/cython /build/gudhi-2.3.0+dfsg/build/cython/CMakeFiles/cython.dir/DependInfo.cmake --color= [ 92%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.cmake None [ 93%] Built target Nerve make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp" The file includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/build AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp" The file includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp" The file includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp" The file includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp" The file includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp" The file includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp" The file includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target GudhUI_autogen [ 93%] Generating gudhi.so make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend cd /build/gudhi-2.3.0+dfsg/build/cython && /usr/bin/python3.7 /build/gudhi-2.3.0+dfsg/build/cython/setup.py build_ext --inplace make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'GudhUI/CMakeFiles/GudhUI.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 98%] Built target GudhUI running build_ext /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) [100%] Do not forget to add /build/gudhi-2.3.0+dfsg/build/cython/ to your PYTHONPATH before using examples or tests make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [100%] Built target cython make[3]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles 0 make[2]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_auto_test --no-parallel --builddirectory=build cd build && make -j1 test ARGS\+=-j1 make[2]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Running tests... /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/gudhi-2.3.0+dfsg/build Start 1: Common_example_vector_double_off_reader 1/133 Test #1: Common_example_vector_double_off_reader ..................................................... Passed 0.06 sec Start 2: Common_example_vector_double_off_reader_diff_files 2/133 Test #2: Common_example_vector_double_off_reader_diff_files .......................................... Passed 0.02 sec Start 3: Common_example_vector_cgal_3D_off_reader 3/133 Test #3: Common_example_vector_cgal_3D_off_reader .................................................... Passed 0.07 sec Start 4: Common_example_vector_cgal_off_reader 4/133 Test #4: Common_example_vector_cgal_off_reader ....................................................... Passed 0.05 sec Start 5: off_file_from_shape_generator_on_sphere_1000_3_15.2 5/133 Test #5: off_file_from_shape_generator_on_sphere_1000_3_15.2 ......................................... Passed 0.08 sec Start 6: off_file_from_shape_generator_in_sphere_100_2 6/133 Test #6: off_file_from_shape_generator_in_sphere_100_2 ............................................... Passed 0.01 sec Start 7: off_file_from_shape_generator_in_cube_10000_3_5.8 7/133 Test #7: off_file_from_shape_generator_in_cube_10000_3_5.8 ........................................... Passed 0.07 sec Start 8: Alpha_complex_example_from_points 8/133 Test #8: Alpha_complex_example_from_points ........................................................... Passed 0.03 sec Start 9: Alpha_complex_example_from_off_60 9/133 Test #9: Alpha_complex_example_from_off_60 ........................................................... Passed 0.01 sec Start 10: Alpha_complex_example_from_off_32 10/133 Test #10: Alpha_complex_example_from_off_32 ........................................................... Passed 0.02 sec Start 11: Alpha_complex_example_from_off_60_diff_files 11/133 Test #11: Alpha_complex_example_from_off_60_diff_files ................................................ Passed 0.01 sec Start 12: Alpha_complex_example_from_off_32_diff_files 12/133 Test #12: Alpha_complex_example_from_off_32_diff_files ................................................ Passed 0.01 sec Start 13: Alpha_complex_utilities_alpha_complex_3d_persistence 13/133 Test #13: Alpha_complex_utilities_alpha_complex_3d_persistence ........................................ Passed 0.27 sec Start 14: Alpha_complex_utilities_exact_alpha_complex_3d 14/133 Test #14: Alpha_complex_utilities_exact_alpha_complex_3d .............................................. Passed 1.06 sec Start 15: Alpha_complex_utilities_weighted_alpha_complex_3d 15/133 Test #15: Alpha_complex_utilities_weighted_alpha_complex_3d ........................................... Passed 0.12 sec Start 16: Alpha_complex_utilities_alpha_complex_persistence 16/133 Test #16: Alpha_complex_utilities_alpha_complex_persistence ........................................... Passed 0.38 sec Start 17: Alpha_complex_utilities_periodic_alpha_complex_3d_persistence 17/133 Test #17: Alpha_complex_utilities_periodic_alpha_complex_3d_persistence ............................... Passed 1.87 sec Start 18: Alpha_complex_utilities_weigted_periodic_alpha_complex_3d 18/133 Test #18: Alpha_complex_utilities_weigted_periodic_alpha_complex_3d ................................... Passed 2.79 sec Start 19: Bitmap_cubical_complex_example_random 19/133 Test #19: Bitmap_cubical_complex_example_random ....................................................... Passed 0.10 sec Start 20: Bitmap_cubical_complex_utility_persistence_one_sphere 20/133 Test #20: Bitmap_cubical_complex_utility_persistence_one_sphere ....................................... Passed 0.11 sec Start 21: Bitmap_cubical_complex_utility_persistence_two_sphere 21/133 Test #21: Bitmap_cubical_complex_utility_persistence_two_sphere ....................................... Passed 0.01 sec Start 22: Bitmap_cubical_complex_utility_periodic_boundary_conditions_2d_torus 22/133 Test #22: Bitmap_cubical_complex_utility_periodic_boundary_conditions_2d_torus ........................ Passed 0.13 sec Start 23: Bitmap_cubical_complex_utility_periodic_boundary_conditions_3d_torus 23/133 Test #23: Bitmap_cubical_complex_utility_periodic_boundary_conditions_3d_torus ........................ Passed 0.02 sec Start 24: Bottleneck_distance_example_basic 24/133 Test #24: Bottleneck_distance_example_basic ........................................................... Passed 0.18 sec Start 25: Bottleneck_distance_example_alpha_rips_persistence_bottleneck 25/133 Test #25: Bottleneck_distance_example_alpha_rips_persistence_bottleneck ............................... Passed 3.95 sec Start 26: Bottleneck_distance_utilities_Bottleneck_read_file 26/133 Test #26: Bottleneck_distance_utilities_Bottleneck_read_file .......................................... Passed 0.09 sec Start 27: Cech_complex_utility_from_rips_on_tore_3D 27/133 Test #27: Cech_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.08 sec Start 28: Cech_complex_example_from_points 28/133 Test #28: Cech_complex_example_from_points ............................................................ Passed 0.07 sec Start 29: Cech_complex_utility_from_rips_on_tore_3D 29/133 Test #29: Cech_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.02 sec Start 30: Contraction_example_tore3D_0.2 30/133 Test #30: Contraction_example_tore3D_0.2 .............................................................. Passed 2.07 sec Start 31: Persistence_representations_example_landscape_on_grid 31/133 Test #31: Persistence_representations_example_landscape_on_grid ....................................... Passed 0.01 sec Start 32: Persistence_representations_example_landscape 32/133 Test #32: Persistence_representations_example_landscape ............................................... Passed 0.12 sec Start 33: Persistence_representations_example_intervals 33/133 Test #33: Persistence_representations_example_intervals ............................................... Passed 0.01 sec Start 34: Persistence_representations_example_vectors 34/133 Test #34: Persistence_representations_example_vectors ................................................. Passed 0.06 sec Start 35: Persistence_representations_example_heat_maps 35/133 Test #35: Persistence_representations_example_heat_maps ............................................... Passed 0.02 sec Start 36: Persistence_representation_utilities_create_pssk 36/133 Test #36: Persistence_representation_utilities_create_pssk ............................................ Passed 0.02 sec Start 37: Persistence_representation_utilities_create_p_h_m_weighted_by_arctan_of_their_persistence 37/133 Test #37: Persistence_representation_utilities_create_p_h_m_weighted_by_arctan_of_their_persistence ... Passed 0.01 sec Start 38: Persistence_representation_utilities_create_p_h_m_weighted_by_distance_from_diagonal 38/133 Test #38: Persistence_representation_utilities_create_p_h_m_weighted_by_distance_from_diagonal ........ Passed 0.01 sec Start 39: Persistence_representation_utilities_create_p_h_m_weighted_by_squared_diag_distance 39/133 Test #39: Persistence_representation_utilities_create_p_h_m_weighted_by_squared_diag_distance ......... Passed 0.01 sec Start 40: Persistence_representation_utilities_create_persistence_heat_maps 40/133 Test #40: Persistence_representation_utilities_create_persistence_heat_maps ........................... Passed 0.04 sec Start 41: Persistence_representation_utilities_plot_persistence_heat_map_first 41/133 Test #41: Persistence_representation_utilities_plot_persistence_heat_map_first ........................ Passed 0.01 sec Start 42: Persistence_representation_utilities_average_persistence_heat_maps 42/133 Test #42: Persistence_representation_utilities_average_persistence_heat_maps .......................... Passed 0.01 sec Start 43: Persistence_representation_utilities_compute_distance_of_persistence_heat_maps 43/133 Test #43: Persistence_representation_utilities_compute_distance_of_persistence_heat_maps .............. Passed 0.02 sec Start 44: Persistence_representation_utilities_compute_scalar_product_of_persistence_heat_maps 44/133 Test #44: Persistence_representation_utilities_compute_scalar_product_of_persistence_heat_maps ........ Passed 0.01 sec Start 45: plot_histogram_of_intervals_lengths 45/133 Test #45: plot_histogram_of_intervals_lengths ......................................................... Passed 0.01 sec Start 46: Persistence_representation_utilities_plot_persistence_intervals_first 46/133 Test #46: Persistence_representation_utilities_plot_persistence_intervals_first ....................... Passed 0.01 sec Start 47: Persistence_representation_utilities_plot_persistence_Betti_numbers_first 47/133 Test #47: Persistence_representation_utilities_plot_persistence_Betti_numbers_first ................... Passed 0.01 sec Start 48: Persistence_representation_utilities_compute_birth_death_range_in_persistence_diagram 48/133 Test #48: Persistence_representation_utilities_compute_birth_death_range_in_persistence_diagram ....... Passed 0.03 sec Start 49: Persistence_representation_utilities_compute_number_of_dominant_intervals 49/133 Test #49: Persistence_representation_utilities_compute_number_of_dominant_intervals ................... Passed 0.02 sec Start 50: Persistence_representation_utilities_compute_bottleneck_distance 50/133 Test #50: Persistence_representation_utilities_compute_bottleneck_distance ............................ Passed 0.01 sec Start 51: Persistence_representation_utilities_create_landscapes 51/133 Test #51: Persistence_representation_utilities_create_landscapes ...................................... Passed 0.01 sec Start 52: Persistence_representation_utilities_plot_landscapes_first 52/133 Test #52: Persistence_representation_utilities_plot_landscapes_first .................................. Passed 0.01 sec Start 53: Persistence_representation_utilities_average_landscapes 53/133 Test #53: Persistence_representation_utilities_average_landscapes ..................................... Passed 0.01 sec Start 54: Persistence_representation_utilities_compute_distance_of_landscapes 54/133 Test #54: Persistence_representation_utilities_compute_distance_of_landscapes ......................... Passed 0.01 sec Start 55: Persistence_representation_utilities_compute_scalar_product_of_landscapes 55/133 Test #55: Persistence_representation_utilities_compute_scalar_product_of_landscapes ................... Passed 0.01 sec Start 56: Persistence_representation_utilities_create_landscapes_on_grid 56/133 Test #56: Persistence_representation_utilities_create_landscapes_on_grid .............................. Passed 0.01 sec Start 57: Persistence_representation_utilities_plot_landscapes_on_grid_first 57/133 Test #57: Persistence_representation_utilities_plot_landscapes_on_grid_first .......................... Passed 0.01 sec Start 58: Persistence_representation_utilities_average_landscapes_on_grid 58/133 Test #58: Persistence_representation_utilities_average_landscapes_on_grid ............................. Passed 0.01 sec Start 59: Persistence_representation_utilities_compute_distance_of_landscapes_on_grid 59/133 Test #59: Persistence_representation_utilities_compute_distance_of_landscapes_on_grid ................. Passed 0.01 sec Start 60: Persistence_representation_utilities_compute_scalar_product_of_landscapes_on_grid 60/133 Test #60: Persistence_representation_utilities_compute_scalar_product_of_landscapes_on_grid ........... Passed 0.02 sec Start 61: Persistence_representation_utilities_create_persistence_vectors 61/133 Test #61: Persistence_representation_utilities_create_persistence_vectors ............................. Passed 0.01 sec Start 62: Persistence_representation_utilities_plot_persistence_vectors_first 62/133 Test #62: Persistence_representation_utilities_plot_persistence_vectors_first ......................... Passed 0.02 sec Start 63: Persistence_representation_utilities_average_persistence_vectors 63/133 Test #63: Persistence_representation_utilities_average_persistence_vectors ............................ Passed 0.01 sec Start 64: Persistence_representation_utilities_compute_distance_of_persistence_vectors 64/133 Test #64: Persistence_representation_utilities_compute_distance_of_persistence_vectors ................ Passed 0.01 sec Start 65: Persistence_representation_utilities_compute_scalar_product_of_persistence_vectors 65/133 Test #65: Persistence_representation_utilities_compute_scalar_product_of_persistence_vectors .......... Passed 0.01 sec Start 66: Persistent_cohomology_example_plain_homology 66/133 Test #66: Persistent_cohomology_example_plain_homology ................................................ Passed 0.01 sec Start 67: Persistent_cohomology_example_from_simple_simplex_tree 67/133 Test #67: Persistent_cohomology_example_from_simple_simplex_tree ...................................... Passed 0.02 sec Start 68: Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D 68/133 Test #68: Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D ............................. Passed 0.32 sec Start 69: Persistent_cohomology_example_via_boundary_matrix 69/133 Test #69: Persistent_cohomology_example_via_boundary_matrix ........................................... Passed 2.48 sec Start 70: Persistent_cohomology_example_multifield_2_71 70/133 Test #70: Persistent_cohomology_example_multifield_2_71 ............................................... Passed 0.63 sec Start 71: Persistent_cohomology_example_custom_persistence_sort 71/133 Test #71: Persistent_cohomology_example_custom_persistence_sort ....................................... Passed 1.96 sec Start 72: Rips_complex_example_one_skeleton_from_points 72/133 Test #72: Rips_complex_example_one_skeleton_from_points ............................................... Passed 0.04 sec Start 73: Rips_complex_example_one_skeleton_from_distance_matrix 73/133 Test #73: Rips_complex_example_one_skeleton_from_distance_matrix ...................................... Passed 0.02 sec Start 74: Rips_complex_example_sparse 74/133 Test #74: Rips_complex_example_sparse ................................................................. Passed 0.02 sec Start 75: Rips_complex_example_one_skeleton_rips_from_correlation_matrix 75/133 Test #75: Rips_complex_example_one_skeleton_rips_from_correlation_matrix .............................. Passed 0.01 sec Start 76: Rips_complex_example_from_off_doc_12_1 76/133 Test #76: Rips_complex_example_from_off_doc_12_1 ...................................................... Passed 0.02 sec Start 77: Rips_complex_example_from_off_doc_12_3 77/133 Test #77: Rips_complex_example_from_off_doc_12_3 ...................................................... Passed 0.01 sec Start 78: Rips_complex_example_from_csv_distance_matrix_doc_12_1 78/133 Test #78: Rips_complex_example_from_csv_distance_matrix_doc_12_1 ...................................... Passed 0.02 sec Start 79: Rips_complex_example_from_csv_distance_matrix_doc_12_3 79/133 Test #79: Rips_complex_example_from_csv_distance_matrix_doc_12_3 ...................................... Passed 0.01 sec Start 80: Rips_complex_example_from_off_doc_12_1_diff_files 80/133 Test #80: Rips_complex_example_from_off_doc_12_1_diff_files ........................................... Passed 0.01 sec Start 81: Rips_complex_example_from_off_doc_12_3_diff_files 81/133 Test #81: Rips_complex_example_from_off_doc_12_3_diff_files ........................................... Passed 0.01 sec Start 82: Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files 82/133 Test #82: Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files ........................... Passed 0.01 sec Start 83: Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files 83/133 Test #83: Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files ........................... Passed 0.01 sec Start 84: Rips_complex_utility_from_rips_distance_matrix 84/133 Test #84: Rips_complex_utility_from_rips_distance_matrix .............................................. Passed 0.01 sec Start 85: Rips_complex_utility_from_rips_on_tore_3D 85/133 Test #85: Rips_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.32 sec Start 86: Rips_complex_utility_from_rips_correlation_matrix 86/133 Test #86: Rips_complex_utility_from_rips_correlation_matrix ........................................... Passed 0.01 sec Start 87: Sparse_rips_complex_utility_on_tore_3D 87/133 Test #87: Sparse_rips_complex_utility_on_tore_3D ...................................................... Passed 2.46 sec Start 88: Simplex_tree_example_from_cliques_of_graph_2 88/133 Test #88: Simplex_tree_example_from_cliques_of_graph_2 ................................................ Passed 0.02 sec Start 89: Simplex_tree_example_from_cliques_of_graph_3 89/133 Test #89: Simplex_tree_example_from_cliques_of_graph_3 ................................................ Passed 0.01 sec Start 90: Simplex_tree_example_simple_simplex_tree 90/133 Test #90: Simplex_tree_example_simple_simplex_tree .................................................... Passed 0.01 sec Start 91: Simplex_tree_example_mini_simplex_tree 91/133 Test #91: Simplex_tree_example_mini_simplex_tree ...................................................... Passed 0.00 sec Start 92: Simplex_tree_example_cech_complex_cgal_mini_sphere_3d 92/133 Test #92: Simplex_tree_example_cech_complex_cgal_mini_sphere_3d ....................................... Passed 0.11 sec Start 93: Simplex_tree_example_graph_expansion_with_blocker 93/133 Test #93: Simplex_tree_example_graph_expansion_with_blocker ........................................... Passed 0.01 sec Start 94: Skeleton_blocker_example_from_simplices 94/133 Test #94: Skeleton_blocker_example_from_simplices ..................................................... Passed 0.01 sec Start 95: Skeleton_blocker_example_iteration 95/133 Test #95: Skeleton_blocker_example_iteration .......................................................... Passed 0.13 sec Start 96: Skeleton_blocker_example_link 96/133 Test #96: Skeleton_blocker_example_link ............................................................... Passed 0.01 sec Start 97: Spatial_searching_example_spatial_searching 97/133 Test #97: Spatial_searching_example_spatial_searching ................................................. Passed 0.01 sec Start 98: Subsampling_example_pick_n_random_points 98/133 Test #98: Subsampling_example_pick_n_random_points .................................................... Passed 0.01 sec Start 99: Subsampling_example_choose_n_farthest_points 99/133 Test #99: Subsampling_example_choose_n_farthest_points ................................................ Passed 0.01 sec Start 100: Subsampling_example_sparsify_point_set 100/133 Test #100: Subsampling_example_sparsify_point_set ...................................................... Passed 0.02 sec Start 101: Tangential_complex_example_basic 101/133 Test #101: Tangential_complex_example_basic ............................................................ Passed 0.29 sec Start 102: Tangential_complex_example_with_perturb 102/133 Test #102: Tangential_complex_example_with_perturb ..................................................... Passed 0.03 sec Start 103: Witness_complex_example_nearest_landmark_table 103/133 Test #103: Witness_complex_example_nearest_landmark_table .............................................. Passed 0.02 sec Start 104: Witness_complex_example_off_test_torus 104/133 Test #104: Witness_complex_example_off_test_torus ...................................................... Passed 0.16 sec Start 105: Witness_complex_example_test_sphere_10 105/133 Test #105: Witness_complex_example_test_sphere_10 ...................................................... Passed 1.28 sec Start 106: Witness_complex_example_strong_off_test_torus 106/133 Test #106: Witness_complex_example_strong_off_test_torus ............................................... Passed 0.11 sec Start 107: Witness_complex_strong_test_torus_persistence 107/133 Test #107: Witness_complex_strong_test_torus_persistence ............................................... Passed 0.05 sec Start 108: Witness_complex_weak_test_torus_persistence 108/133 Test #108: Witness_complex_weak_test_torus_persistence ................................................. Passed 0.11 sec Start 109: Nerve_GIC_example_CoordGIC 109/133 Test #109: Nerve_GIC_example_CoordGIC .................................................................. Passed 2.33 sec Start 110: alpha_rips_persistence_bottleneck_distance_py_test 110/133 Test #110: alpha_rips_persistence_bottleneck_distance_py_test .......................................... Passed 3.87 sec Start 111: tangential_complex_plain_homology_from_off_file_example_py_test 111/133 Test #111: tangential_complex_plain_homology_from_off_file_example_py_test ............................. Passed 1.51 sec Start 112: test_tangential_complex_py_test 112/133 Test #112: test_tangential_complex_py_test ............................................................. Passed 1.97 sec Start 113: euclidean_strong_witness_complex_diagram_persistence_from_off_file_example_py_test 113/133 Test #113: euclidean_strong_witness_complex_diagram_persistence_from_off_file_example_py_test .......... Passed 1.62 sec Start 114: euclidean_witness_complex_diagram_persistence_from_off_file_example_py_test 114/133 Test #114: euclidean_witness_complex_diagram_persistence_from_off_file_example_py_test ................. Passed 1.42 sec Start 115: test_subsampling_py_test 115/133 Test #115: test_subsampling_py_test .................................................................... Passed 2.03 sec Start 116: bottleneck_basic_example_py_test 116/133 Test #116: bottleneck_basic_example_py_test ............................................................ Passed 1.20 sec Start 117: test_bottleneck_distance_py_test 117/133 Test #117: test_bottleneck_distance_py_test ............................................................ Passed 1.77 sec Start 118: alpha_complex_from_points_example_py_test 118/133 Test #118: alpha_complex_from_points_example_py_test ................................................... Passed 1.26 sec Start 119: alpha_complex_diagram_persistence_from_off_file_example_py_test 119/133 Test #119: alpha_complex_diagram_persistence_from_off_file_example_py_test ............................. Passed 1.50 sec Start 120: test_alpha_complex_py_test 120/133 Test #120: test_alpha_complex_py_test .................................................................. Passed 1.64 sec Start 121: test_euclidean_witness_complex_py_test 121/133 Test #121: test_euclidean_witness_complex_py_test ...................................................... Passed 1.88 sec Start 122: periodic_cubical_complex_barcode_persistence_from_perseus_file_example_py_test 122/133 Test #122: periodic_cubical_complex_barcode_persistence_from_perseus_file_example_py_test .............. Passed 1.54 sec Start 123: random_cubical_complex_persistence_example_py_test 123/133 Test #123: random_cubical_complex_persistence_example_py_test .......................................... Passed 1.39 sec Start 124: test_cubical_complex_py_test 124/133 Test #124: test_cubical_complex_py_test ................................................................ Passed 1.97 sec Start 125: rips_complex_diagram_persistence_from_distance_matrix_file_example_py_test 125/133 Test #125: rips_complex_diagram_persistence_from_distance_matrix_file_example_py_test .................. Passed 3.01 sec Start 126: rips_complex_diagram_persistence_from_off_file_example_py_test 126/133 Test #126: rips_complex_diagram_persistence_from_off_file_example_py_test .............................. Passed 2.45 sec Start 127: rips_complex_from_points_example_py_test 127/133 Test #127: rips_complex_from_points_example_py_test .................................................... Passed 2.48 sec Start 128: test_rips_complex_py_test 128/133 Test #128: test_rips_complex_py_test ................................................................... Passed 2.16 sec Start 129: simplex_tree_example_py_test 129/133 Test #129: simplex_tree_example_py_test ................................................................ Passed 1.95 sec Start 130: test_simplex_tree_py_test 130/133 Test #130: test_simplex_tree_py_test ................................................................... Passed 1.73 sec Start 131: witness_complex_from_nearest_landmark_table_py_test 131/133 Test #131: witness_complex_from_nearest_landmark_table_py_test ......................................... Passed 1.42 sec Start 132: test_witness_complex_py_test 132/133 Test #132: test_witness_complex_py_test ................................................................ Passed 1.80 sec Start 133: test_reader_utils_py_test 133/133 Test #133: test_reader_utils_py_test ................................................................... Passed 1.73 sec 100% tests passed, 0 tests failed out of 133 Total Test time (real) = 73.25 sec make[2]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' for py3ver in ; do \ dh_auto_test --no-parallel --builddirectory=build$py3ver ; \ done make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' create-stamp debian/debhelper-build-stamp for py3ver in ; do \ dh build --with=python3 --builddirectory=build$py3ver ; \ done fakeroot debian/rules binary dh binary --with=python3 --builddirectory=build dh_testroot -O--builddirectory=build dh_prep -O--builddirectory=build debian/rules override_dh_auto_install make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' find example -type f \( -name '*.cpp' -o \( -name '*.txt' -a ! -iname 'cmake*' \) \) -exec sh -c 'install -D -m 644 $0 debian/tmp/usr/share/doc/libgudhi-examples/$0' {} \; dh_auto_install --builddirectory=build cd build && make -j16 install DESTDIR=/build/gudhi-2.3.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -S/build/gudhi-2.3.0+dfsg -B/build/gudhi-2.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles /build/gudhi-2.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_3D_off_reader.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/depend make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/depend make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/common /build/gudhi-2.3.0+dfsg/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/vector_double_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_3D_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 1%] Built target off_file_from_shape_generator make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend [ 2%] Built target cgal_3D_off_reader make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend [ 3%] Built target vector_double_off_reader make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend [ 4%] Built target cgal_off_reader make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 4%] Built target Alpha_complex_example_from_off make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend [ 5%] Built target Alpha_complex_example_from_points make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 6%] Built target Random_bitmap_cubical_complex make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= [ 7%] Built target periodic_cubical_complex_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend [ 8%] Built target cubical_complex_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build [ 8%] Built target exact_alpha_complex_3d_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend [ 9%] Built target weighted_alpha_complex_3d_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend [ 10%] Built target alpha_complex_3d_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend [ 11%] Built target weighted_periodic_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= [ 12%] Built target alpha_complex_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend [ 13%] Built target periodic_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target alpha_rips_persistence_bottleneck_distance make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend [ 15%] Built target bottleneck_basic_example make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= [ 16%] Built target bottleneck_distance make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= [ 17%] Built target Cech_complex_example_from_points make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend [ 18%] Built target Cech_complex_example_step_by_step make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build [ 19%] Built target Persistence_representations_example_landscape make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 20%] Built target Persistence_representations_example_landscape_on_grid make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Built target Persistence_representations_example_intervals make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend [ 22%] Built target Persistence_representations_example_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend [ 23%] Built target compute_scalar_product_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= [ 24%] Built target compute_distance_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend [ 24%] Built target Persistence_representations_example_vectors make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend [ 25%] Built target create_pssk make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 26%] Built target cech_persistence make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 26%] Built target average_persistence_heat_maps make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend [ 27%] Built target create_p_h_m_weighted_by_distance_from_diagonal make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build [ 28%] Built target create_persistence_heat_maps make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= [ 29%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build [ 30%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/GarlandHeckbert.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 31%] Built target plot_histogram_of_intervals_lengths make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 32%] Built target plot_persistence_heat_map make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/RipsContraction.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Built target GarlandHeckbert make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build [ 34%] Built target plot_persistence_Betti_numbers make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend [ 34%] Built target plot_persistence_intervals [ 35%] Built target compute_birth_death_range_in_persistence_diagram make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend [ 36%] Built target RipsContraction make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 37%] Built target compute_number_of_dominant_intervals make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= [ 38%] Built target plot_landscapes make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= [ 39%] Built target create_landscapes make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 40%] Built target compute_bottleneck_distance make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend [ 41%] Built target compute_scalar_product_of_landscapes make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend [ 42%] Built target average_landscapes make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= [ 43%] Built target compute_distance_of_landscapes make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= [ 44%] Built target plot_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend [ 45%] Built target average_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build [ 46%] Built target compute_distance_of_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend [ 47%] Built target compute_scalar_product_of_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend [ 48%] Built target create_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= [ 48%] Built target create_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= [ 50%] Built target plot_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend [ 51%] Built target average_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend [ 51%] Built target compute_distance_of_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend [ 52%] Built target compute_scalar_product_of_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 53%] Built target persistence_from_simple_simplex_tree make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= [ 54%] Built target plain_homology make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build [ 55%] Built target custom_persistence_sort make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build [ 56%] Built target rips_multifield_persistence make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend [ 57%] Built target rips_persistence_step_by_step make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= [ 58%] Built target Rips_complex_example_one_skeleton_from_points make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= [ 59%] Built target persistence_from_file make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend [ 60%] Built target rips_persistence_via_boundary_matrix make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= [ 61%] Built target Rips_complex_example_from_csv_distance_matrix make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend [ 62%] Built target Rips_complex_example_one_skeleton_from_distance_matrix make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend [ 63%] Built target Rips_complex_example_from_off make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= [ 64%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= [ 65%] Built target Rips_complex_example_sparse make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Built target rips_distance_matrix_persistence make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 67%] Built target rips_correlation_matrix_persistence make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= [ 68%] Built target rips_persistence make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build [ 68%] Built target Simplex_tree_example_graph_expansion_with_blocker make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build [ 69%] Built target Simplex_tree_example_simple_simplex_tree make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build [ 70%] Built target Simplex_tree_example_mini_simplex_tree make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build [ 71%] Built target sparse_rips_persistence make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= [ 72%] Built target Simplex_tree_example_alpha_shapes_3_from_off make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= [ 73%] Built target Spatial_searching_example_spatial_searching make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend [ 74%] Built target Simplex_tree_example_from_cliques_of_graph make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= [ 75%] Built target Subsampling_example_pick_n_random_points make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 76%] Built target Subsampling_example_custom_kernel make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 77%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= [ 78%] Built target Subsampling_example_sparsify_point_set make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend [ 79%] Built target Subsampling_example_choose_n_farthest_points make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build [ 80%] Built target Skeleton_blocker_example_iteration make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/cython /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/cython /build/gudhi-2.3.0+dfsg/build/cython/CMakeFiles/cython.dir/DependInfo.cmake --color= [ 81%] Built target Skeleton_blocker_example_from_simplices [ 82%] Built target Skeleton_blocker_example_link make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build [ 82%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.cmake None make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp" The file includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp" The file includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. [ 82%] Generating gudhi.so cd /build/gudhi-2.3.0+dfsg/build/cython && /usr/bin/python3.7 /build/gudhi-2.3.0+dfsg/build/cython/setup.py build_ext --inplace AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp" The file includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp" The file includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp" The file includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. [ 83%] Built target Witness_complex_example_sphere AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp" The file includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. [ 84%] Built target Witness_complex_example_strong_off make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp" The file includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. [ 85%] Built target Witness_complex_example_nearest_landmark_table make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 86%] Built target Witness_complex_strong_witness_persistence [ 87%] Built target Witness_complex_weak_witness_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 88%] Built target FuncGIC make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Built target CoordGIC [ 90%] Built target VoronoiGIC [ 91%] Built target Nerve make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target Witness_complex_example_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target GudhUI_autogen make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target Tangential_complex_example_basic make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'GudhUI/CMakeFiles/GudhUI.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target Tangential_complex_example_with_perturb [ 98%] Built target GudhUI running build_ext /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) [100%] Do not forget to add /build/gudhi-2.3.0+dfsg/build/cython/ to your PYTHONPATH before using examples or tests make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [100%] Built target cython make[3]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/share/gudhi/GUDHIConfig.cmake -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/share/gudhi/GUDHIConfigVersion.cmake -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/writing_persistence_to_file.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/sparsify_point_set.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/reader_utils.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/read_persistence_from_file.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/random_point_generators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/pick_n_random_points.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/graph_simplicial_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/distance_functions.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/console_color.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/common_persistence_representations.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/choose_n_farthest_points.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/allocator.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Witness_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Witness_complex/all_faces_in.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Unitary_tests_utils.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/utilities.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/config.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/Simplicial_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Strong_witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Sparse_rips_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_simplifiable_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_link_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_geometric_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_contractor.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal/Trie.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal/Top_faces.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/indexing_tag.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_siblings.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simple_object_pool.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Rips_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Points_off_io.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Points_3D_off_io.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Point.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Multi_field.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Field_Zp.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_vectors.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_landscape_on_grid.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_landscape.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_intervals_with_distances.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_intervals.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_heat_maps.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_graph.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/PSSK.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Off_reader.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Null_output_iterator.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Neighbors_finder.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Miniball.hpp -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Miniball.README -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Miniball.COPYRIGHT -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Kd_tree_search.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Internal_point.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Hasse_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Graph_matching.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/GIC.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Euclidean_witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Euclidean_strong_witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Edge_contraction.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Debug_utils.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Valid_contraction_policy.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Placement_policy.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Middle_placement.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Link_condition_valid_contraction.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/First_vertex_placement.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Edge_length_cost.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Dummy_valid_contraction.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Cost_policy.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Contraction_visitor.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/Edge_profile.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/CGAL_queue -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/CGAL_queue/Modifiable_priority_queue.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Clock.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Cech_complex_blocker.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Cech_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bottleneck.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex_base.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex/counter.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Alpha_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Active_witness -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Active_witness/Active_witness_iterator.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Active_witness/Active_witness.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/vector_double_off_reader -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/cgal_3D_off_reader -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/cgal_off_reader -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/off_file_from_shape_generator -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Alpha_complex_example_from_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Alpha_complex_example_from_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/alpha_complex_3d_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/exact_alpha_complex_3d_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/weighted_alpha_complex_3d_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/alpha_complex_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/periodic_alpha_complex_3d_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/weighted_periodic_alpha_complex_3d_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Random_bitmap_cubical_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/cubical_complex_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/periodic_cubical_complex_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/bottleneck_basic_example -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/alpha_rips_persistence_bottleneck_distance -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/bottleneck_distance -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/cech_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/RipsContraction -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/GarlandHeckbert -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Persistence_representations_example_landscape_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Persistence_representations_example_landscape -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Persistence_representations_example_intervals -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Persistence_representations_example_vectors -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Persistence_representations_example_heat_maps -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_pssk -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_p_h_m_weighted_by_arctan_of_their_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_p_h_m_weighted_by_distance_from_diagonal -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_p_h_m_weighted_by_squared_diag_distance -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_persistence_heat_maps -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_persistence_heat_map -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/average_persistence_heat_maps -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_distance_of_persistence_heat_maps -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_persistence_heat_maps -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_histogram_of_intervals_lengths -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_persistence_intervals -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_persistence_Betti_numbers -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_birth_death_range_in_persistence_diagram -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_number_of_dominant_intervals -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_bottleneck_distance -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/average_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_distance_of_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_landscapes_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_landscapes_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/average_landscapes_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_distance_of_landscapes_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_landscapes_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_persistence_vectors -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_persistence_vectors -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/average_persistence_vectors -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_distance_of_persistence_vectors -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_persistence_vectors -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plain_homology -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/persistence_from_simple_simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_persistence_step_by_step -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_persistence_via_boundary_matrix -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/persistence_from_file -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_multifield_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/custom_persistence_sort -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Rips_complex_example_from_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Rips_complex_example_one_skeleton_from_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Rips_complex_example_one_skeleton_from_distance_matrix -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Rips_complex_example_from_csv_distance_matrix -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Rips_complex_example_one_skeleton_rips_from_correlation_matrix -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_distance_matrix_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_correlation_matrix_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/sparse_rips_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_from_cliques_of_graph -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_simple_simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_mini_simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_alpha_shapes_3_from_off -- Up-to-date: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_alpha_shapes_3_from_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_graph_expansion_with_blocker -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Skeleton_blocker_example_from_simplices -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Skeleton_blocker_example_iteration -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Skeleton_blocker_example_link -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Spatial_searching_example_spatial_searching -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_pick_n_random_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_choose_n_farthest_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_custom_kernel -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_sparsify_point_set -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Tangential_complex_example_basic -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Tangential_complex_example_with_perturb -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_nearest_landmark_table -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_sphere -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_strong_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_strong_witness_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_weak_witness_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/CoordGIC -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/FuncGIC -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Nerve -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/VoronoiGIC -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/KeplerMapperVisuFromTxtFile.py -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/km.py -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/km.py.COPYRIGHT -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/GudhUI -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/gudhi.cpython-37m-x86_64-linux-gnu.so -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7 -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/CMakeFiles -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/CMakeFiles/cython.dir -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/CMakeFiles/sphinx.dir make[2]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' for py3ver in ; do \ dh_auto_install --builddirectory=build$py3ver ; \ done rm debian/tmp/usr/include/gudhi/Miniball.COPYRIGHT rm debian/tmp/usr/include/gudhi/Miniball.README mv debian/tmp/usr/bin/Nerve \ debian/tmp/usr/bin/gudhi-nerve mv debian/tmp/usr/bin/VoronoiGIC \ debian/tmp/usr/bin/gudhi-voronoi-gic mv debian/tmp/usr/bin/Witness_complex_strong_witness_persistence \ debian/tmp/usr/bin/gudhi-witness-complex-strong-witness-persistence mv debian/tmp/usr/bin/Witness_complex_weak_witness_persistence \ debian/tmp/usr/bin/gudhi-witness-complex-weak-witness-persistence mv debian/tmp/usr/bin/alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-alpha-complex-3d-persistence mv debian/tmp/usr/bin/alpha_complex_persistence \ debian/tmp/usr/bin/gudhi-alpha-complex-persistence mv debian/tmp/usr/bin/bottleneck_distance \ debian/tmp/usr/bin/gudhi-bottleneck-distance mv debian/tmp/usr/bin/cech_persistence \ debian/tmp/usr/bin/gudhi-cech-persistence mv debian/tmp/usr/bin/cubical_complex_persistence \ debian/tmp/usr/bin/gudhi-cubical-complex-persistence mv debian/tmp/usr/bin/exact_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-exact-alpha-complex-3d-persistence mv debian/tmp/usr/bin/off_file_from_shape_generator \ debian/tmp/usr/bin/gudhi-off-file-from-shape-generator mv debian/tmp/usr/bin/periodic_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-periodic-alpha-complex-3d-persistence mv debian/tmp/usr/bin/periodic_cubical_complex_persistence \ debian/tmp/usr/bin/gudhi-periodic-cubical-complex-persistence mv debian/tmp/usr/bin/rips_correlation_matrix_persistence \ debian/tmp/usr/bin/gudhi-rips-correlation-matrix-persistence mv debian/tmp/usr/bin/rips_distance_matrix_persistence \ debian/tmp/usr/bin/gudhi-rips-distance-matrix-persistence mv debian/tmp/usr/bin/rips_persistence \ debian/tmp/usr/bin/gudhi-rips-persistence mv debian/tmp/usr/bin/sparse_rips_persistence \ debian/tmp/usr/bin/gudhi-sparse-rips-persistence mv debian/tmp/usr/bin/weighted_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-weighted-alpha-complex-3d-persistence mv debian/tmp/usr/bin/weighted_periodic_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence install -D build/GudhUI/GudhUI debian/tmp/usr/bin/gudhui make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' dh_install -O--builddirectory=build dh_installdocs -O--builddirectory=build dh_installchangelogs -O--builddirectory=build dh_installman -O--builddirectory=build dh_python3 -O--builddirectory=build dh_installinit -O--builddirectory=build dh_perl -O--builddirectory=build dh_link -O--builddirectory=build dh_strip_nondeterminism -O--builddirectory=build debian/rules override_dh_compress make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_compress -X.cpp make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' dh_fixperms -O--builddirectory=build dh_missing -O--builddirectory=build dh_strip -O--builddirectory=build dh_makeshlibs -O--builddirectory=build dh_shlibdeps -O--builddirectory=build dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-gudhi/usr/lib/python3/dist-packages/gudhi.cpython-37m-x86_64-linux-gnu.so was not linked against libboost_system.so.1.67.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-gudhi/usr/lib/python3/dist-packages/gudhi.cpython-37m-x86_64-linux-gnu.so was not linked against libtbbmalloc.so.2 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-gudhi/usr/lib/python3/dist-packages/gudhi.cpython-37m-x86_64-linux-gnu.so was not linked against libgmpxx.so.4 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libgmpxx.so.4 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libatomic.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libgmp.so.10 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libmpfr.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libGLU.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libQt5Xml.so.5 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libtbbmalloc.so.2 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-rips-distance-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-persistence debian/gudhi-utils/usr/bin/gudhi-alpha-complex-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-exact-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-nerve debian/gudhi-utils/usr/bin/gudhi-witness-complex-strong-witness-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-voronoi-gic debian/gudhi-utils/usr/bin/gudhi-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-bottleneck-distance debian/gudhi-utils/usr/bin/gudhi-cech-persistence debian/gudhi-utils/usr/bin/gudhi-witness-complex-weak-witness-persistence debian/gudhi-utils/usr/bin/gudhi-sparse-rips-persistence were not linked against libtbbmalloc.so.2 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence was not linked against libboost_system.so.1.67.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-rips-distance-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-persistence debian/gudhi-utils/usr/bin/gudhi-alpha-complex-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-exact-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-nerve debian/gudhi-utils/usr/bin/gudhi-witness-complex-strong-witness-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-voronoi-gic debian/gudhi-utils/usr/bin/gudhi-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-bottleneck-distance debian/gudhi-utils/usr/bin/gudhi-cech-persistence debian/gudhi-utils/usr/bin/gudhi-witness-complex-weak-witness-persistence debian/gudhi-utils/usr/bin/gudhi-sparse-rips-persistence were not linked against libatomic.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-off-file-from-shape-generator debian/gudhi-utils/usr/bin/gudhi-rips-distance-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-persistence debian/gudhi-utils/usr/bin/gudhi-alpha-complex-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-exact-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-nerve debian/gudhi-utils/usr/bin/gudhi-witness-complex-strong-witness-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-voronoi-gic debian/gudhi-utils/usr/bin/gudhi-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-bottleneck-distance debian/gudhi-utils/usr/bin/gudhi-cech-persistence debian/gudhi-utils/usr/bin/gudhi-witness-complex-weak-witness-persistence debian/gudhi-utils/usr/bin/gudhi-sparse-rips-persistence were not linked against libgmpxx.so.4 (they use none of the library's symbols) dh_installdeb -O--builddirectory=build dh_gencontrol -O--builddirectory=build dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--builddirectory=build dh_builddeb -O--builddirectory=build dpkg-deb: building package 'gudhi-utils' in '../gudhi-utils_2.3.0+dfsg-2_amd64.deb'. dpkg-deb: building package 'libgudhi-doc' in '../libgudhi-doc_2.3.0+dfsg-2_all.deb'. dpkg-deb: building package 'python3-gudhi-dbgsym' in '../python3-gudhi-dbgsym_2.3.0+dfsg-2_amd64.deb'. dpkg-deb: building package 'libgudhi-dev' in '../libgudhi-dev_2.3.0+dfsg-2_all.deb'. dpkg-deb: building package 'python3-gudhi' in '../python3-gudhi_2.3.0+dfsg-2_amd64.deb'. dpkg-deb: building package 'gudhui' in '../gudhui_2.3.0+dfsg-2_amd64.deb'. dpkg-deb: building package 'libgudhi-examples' in '../libgudhi-examples_2.3.0+dfsg-2_all.deb'. dpkg-deb: building package 'gudhui-dbgsym' in '../gudhui-dbgsym_2.3.0+dfsg-2_amd64.deb'. dpkg-deb: building package 'gudhi-utils-dbgsym' in '../gudhi-utils-dbgsym_2.3.0+dfsg-2_amd64.deb'. for py3ver in ; do \ dh binary --with=python3 --builddirectory=build$py3ver ; \ done dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../gudhi_2.3.0+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1974304/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1974304/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1974304 and its subdirectories I: Current time: Thu Jan 5 23:23:17 +14 2023 I: pbuilder-time-stamp: 1672910597