I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 18 03:50:47 +14 2024 I: pbuilder-time-stamp: 1705499447 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [golang-github-biogo-biogo_1.0.3-1.dsc] I: copying [./golang-github-biogo-biogo_1.0.3.orig.tar.gz] I: copying [./golang-github-biogo-biogo_1.0.3-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.oNQsrxaX/trustedkeys.kbx': General error gpgv: Signature made Sat Dec 5 13:01:30 2020 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./golang-github-biogo-biogo_1.0.3-1.dsc dpkg-source: info: extracting golang-github-biogo-biogo in golang-github-biogo-biogo-1.0.3 dpkg-source: info: unpacking golang-github-biogo-biogo_1.0.3.orig.tar.gz dpkg-source: info: unpacking golang-github-biogo-biogo_1.0.3-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1370/tmp/hooks/D01_modify_environment starting debug: Running on ionos2-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 17 13:50 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1370/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1370/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=7 ' DIRSTACK=() DISTRIBUTION=bullseye EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=28f732ac2b0941b6b42d93c31fc34bf1 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1370 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YLlfPi08/pbuilderrc_lwyY --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YLlfPi08/b2 --logfile b2/build.log golang-github-biogo-biogo_1.0.3-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Mar 27 2022 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 7 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 7 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 71928 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 210488 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip -rwxr-xr-x 1 root root 21916 Nov 7 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Jan 20 2022 more -rwsr-xr-x 1 root root 50720 Jan 20 2022 mount -rwxr-xr-x 1 root root 13856 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 7 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 9 Jan 17 13:50 sh -> /bin/bash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Jan 20 2022 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 17 2021 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Jan 20 2022 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 7 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/1370/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-biogo-hts-dev, golang-github-biogo-graph-dev, golang-github-biogo-store-dev, golang-gopkg-check.v1-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 17763 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-golang; however: Package dh-golang is not installed. pbuilder-satisfydepends-dummy depends on golang-any; however: Package golang-any is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-hts-dev; however: Package golang-github-biogo-hts-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-graph-dev; however: Package golang-github-biogo-graph-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-store-dev; however: Package golang-github-biogo-store-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-gopkg-check.v1-dev; however: Package golang-gopkg-check.v1-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-golang{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} golang-1.15-go{a} golang-1.15-src{a} golang-any{a} golang-github-biogo-graph-dev{a} golang-github-biogo-hts-dev{a} golang-github-biogo-store-dev{a} golang-github-creack-pty-dev{a} golang-github-kr-pretty-dev{a} golang-github-kr-text-dev{a} golang-github-ulikunitz-xz-dev{a} golang-go{a} golang-gopkg-check.v1-dev{a} golang-src{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx pkg-config pkgconf wget 0 packages upgraded, 45 newly installed, 0 to remove and 0 not upgraded. Need to get 79.5 MB of archives. After unpacking 405 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-8+deb11u1 [149 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3+deb11u1 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3+deb11u1 [135 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3+deb11u1 [69.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-7 [8775 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7+deb11u4 [728 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 dh-golang all 1.51 [24.6 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 golang-1.15-src i386 1.15.15-1~deb11u4 [13.9 MB] Get: 34 http://deb.debian.org/debian bullseye/main i386 golang-1.15-go i386 1.15.15-1~deb11u4 [46.3 MB] Get: 35 http://deb.debian.org/debian bullseye/main i386 golang-src i386 2:1.15~1 [4856 B] Get: 36 http://deb.debian.org/debian bullseye/main i386 golang-go i386 2:1.15~1 [24.0 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 golang-any i386 2:1.15~1 [4980 B] Get: 38 http://deb.debian.org/debian bullseye/main i386 golang-github-creack-pty-dev all 1.1.11-1 [8380 B] Get: 39 http://deb.debian.org/debian bullseye/main i386 golang-github-kr-text-dev all 0.2.0-1 [11.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 golang-github-kr-pretty-dev all 0.2.1+git20200831.59b4212-1 [14.6 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 golang-gopkg-check.v1-dev all 0.0+git20200902.038fdea-1 [32.1 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 golang-github-biogo-graph-dev all 0.0~git20150317.057c198-2 [13.0 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 golang-github-biogo-store-dev all 0.0~git20200525.8c94ae1-2 [34.3 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 golang-github-ulikunitz-xz-dev all 0.5.6-2 [352 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 golang-github-biogo-hts-dev all 1.1.0+dfsg1-2 [292 kB] Fetched 79.5 MB in 38s (2108 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17763 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8+deb11u1_i386.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../01-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../03-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3+deb11u1_i386.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../07-libmagic1_1%3a5.39-3+deb11u1_i386.deb ... Unpacking libmagic1:i386 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3+deb11u1_i386.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_i386.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../10-libsigsegv2_2.13-1_i386.deb ... Unpacking libsigsegv2:i386 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_i386.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../23-libelf1_0.183-1_i386.deb ... Unpacking libelf1:i386 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_i386.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:i386. Preparing to unpack .../25-libicu67_67.1-7_i386.deb ... Unpacking libicu67:i386 (67.1-7) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7+deb11u4_i386.deb ... 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Unpacking golang-github-kr-text-dev (0.2.0-1) ... Selecting previously unselected package golang-github-kr-pretty-dev. Preparing to unpack .../39-golang-github-kr-pretty-dev_0.2.1+git20200831.59b4212-1_all.deb ... Unpacking golang-github-kr-pretty-dev (0.2.1+git20200831.59b4212-1) ... Selecting previously unselected package golang-gopkg-check.v1-dev. Preparing to unpack .../40-golang-gopkg-check.v1-dev_0.0+git20200902.038fdea-1_all.deb ... Unpacking golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-1) ... Selecting previously unselected package golang-github-biogo-graph-dev. Preparing to unpack .../41-golang-github-biogo-graph-dev_0.0~git20150317.057c198-2_all.deb ... Unpacking golang-github-biogo-graph-dev (0.0~git20150317.057c198-2) ... Selecting previously unselected package golang-github-biogo-store-dev. Preparing to unpack .../42-golang-github-biogo-store-dev_0.0~git20200525.8c94ae1-2_all.deb ... Unpacking golang-github-biogo-store-dev (0.0~git20200525.8c94ae1-2) ... Selecting previously unselected package golang-github-ulikunitz-xz-dev. Preparing to unpack .../43-golang-github-ulikunitz-xz-dev_0.5.6-2_all.deb ... Unpacking golang-github-ulikunitz-xz-dev (0.5.6-2) ... Selecting previously unselected package golang-github-biogo-hts-dev. Preparing to unpack .../44-golang-github-biogo-hts-dev_1.1.0+dfsg1-2_all.deb ... Unpacking golang-github-biogo-hts-dev (1.1.0+dfsg1-2) ... Setting up libpipeline1:i386 (1.5.3-1) ... Setting up bsdextrautils (2.36.1-8+deb11u1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up golang-github-creack-pty-dev (1.1.11-1) ... Setting up libicu67:i386 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3+deb11u1) ... Setting up golang-1.15-src (1.15.15-1~deb11u4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:i386 (1:5.39-3+deb11u1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3+deb11u1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up golang-github-kr-text-dev (0.2.0-1) ... Setting up libsigsegv2:i386 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up golang-src:i386 (2:1.15~1) ... Setting up golang-1.15-go (1.15.15-1~deb11u4) ... Setting up libelf1:i386 (0.183-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.7+deb11u4) ... Setting up golang-github-ulikunitz-xz-dev (0.5.6-2) ... Setting up golang-github-kr-pretty-dev (0.2.1+git20200831.59b4212-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up golang-go (2:1.15~1) ... Setting up m4 (1.4.18-5) ... Setting up golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-1) ... Setting up golang-any:i386 (2:1.15~1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up golang-github-biogo-hts-dev (1.1.0+dfsg1-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up golang-github-biogo-graph-dev (0.0~git20150317.057c198-2) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up golang-github-biogo-store-dev (0.0~git20200525.8c94ae1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Setting up dh-golang (1.51) ... Processing triggers for libc-bin (2.31-13+deb11u6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1370/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bullseye I: user script /srv/workspace/pbuilder/1370/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/golang-github-biogo-biogo-1.0.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-biogo-biogo_1.0.3-1_source.changes dpkg-buildpackage: info: source package golang-github-biogo-biogo dpkg-buildpackage: info: source version 1.0.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary dh binary --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 7 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util github.com/biogo/biogo internal/unsafeheader unicode/utf8 math/bits internal/cpu runtime/internal/atomic internal/race runtime/internal/sys sync/atomic unicode encoding github.com/biogo/store/llrb image/color internal/bytealg internal/testlog runtime/internal/math math runtime internal/reflectlite sync math/rand errors sort internal/oserror io github.com/biogo/store/interval strconv syscall container/heap strings hash bytes text/tabwriter hash/adler32 reflect github.com/biogo/biogo/feat bufio github.com/biogo/biogo/io/featio github.com/biogo/biogo/feat/gene internal/syscall/unix internal/syscall/execenv time internal/poll os internal/fmtsort encoding/binary path/filepath fmt io/ioutil github.com/biogo/biogo/alphabet encoding/csv log github.com/biogo/biogo/util encoding/gob github.com/biogo/graph compress/flate github.com/biogo/biogo/errors github.com/biogo/biogo/concurrent github.com/biogo/hts/fai github.com/biogo/biogo/seq github.com/biogo/biogo/align/matrix github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/align github.com/biogo/biogo/io/seqio github.com/biogo/biogo/feat/genome github.com/biogo/biogo/seq/linear compress/zlib github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/complexity github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/morass github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/multi github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/pwm github.com/biogo/biogo/seq/quality github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/align/pals dh_auto_test -O--builddirectory=_build -O--buildsystem=golang cd _build && go test -vet=off -v -p 7 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util ? github.com/biogo/biogo [no test files] === RUN Test OK: 2 passed --- PASS: Test (0.00s) === RUN ExampleFitted_Align --- PASS: ExampleFitted_Align (0.00s) === RUN ExampleFittedAffine_Align --- PASS: ExampleFittedAffine_Align (0.00s) === RUN ExampleNW_Align --- PASS: ExampleNW_Align (0.00s) === RUN ExampleNWAffine_Align --- PASS: ExampleNWAffine_Align (0.00s) === RUN ExampleSW_Align_a --- PASS: ExampleSW_Align_a (0.00s) === RUN ExampleSW_Align_b --- PASS: ExampleSW_Align_b (0.00s) === RUN ExampleSWAffine_Align --- PASS: ExampleSWAffine_Align (0.00s) PASS ok github.com/biogo/biogo/align 0.012s ? github.com/biogo/biogo/align/matrix [no test files] === RUN Test OK: 5 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/align/pals 0.017s === RUN Test OK: 1 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/align/pals/dp 0.013s === RUN Test OK: 1 passed --- PASS: Test (0.02s) PASS ok github.com/biogo/biogo/align/pals/filter 0.028s === RUN Test OK: 10 passed --- PASS: Test (0.03s) === RUN Example_allValid --- PASS: Example_allValid (0.00s) === RUN Example_complement --- PASS: Example_complement (0.00s) PASS ok github.com/biogo/biogo/alphabet 0.051s === RUN Test OK: 4 passed --- PASS: Test (0.92s) PASS ok github.com/biogo/biogo/complexity 0.938s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleMap --- PASS: ExampleMap (0.00s) === RUN ExamplePromiseMap --- PASS: ExamplePromiseMap (1.01s) === RUN ExampleLazily --- PASS: ExampleLazily (0.00s) PASS ok github.com/biogo/biogo/concurrent 1.021s === RUN Test OK: 4 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/errors 0.015s === RUN Test OK: 6 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/feat 0.008s === RUN Test OK: 4 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/feat/gene 0.011s ? github.com/biogo/biogo/feat/genome [no test files] ? github.com/biogo/biogo/feat/genome/cow/bt7 [no test files] ? github.com/biogo/biogo/feat/genome/drosophila/dm3 [no test files] ? github.com/biogo/biogo/feat/genome/human/hg19 [no test files] ? github.com/biogo/biogo/feat/genome/mouse/mm10 [no test files] === RUN Test runtime: out of memory: cannot allocate 1077936128-byte block (1731854336 in use) fatal error: out of memory runtime stack: runtime.throw(0x81f6f0e, 0xd) /usr/lib/go-1.15/src/runtime/panic.go:1116 +0x6a runtime.largeAlloc(0x40000004, 0x8cf0101, 0x8cf3000) /usr/lib/go-1.15/src/runtime/malloc.go:1179 +0x15d runtime.mallocgc.func1() /usr/lib/go-1.15/src/runtime/malloc.go:1071 +0x39 runtime.systemstack(0x8c00700) /usr/lib/go-1.15/src/runtime/asm_386.s:391 +0x53 runtime.mstart() /usr/lib/go-1.15/src/runtime/proc.go:1116 goroutine 7 [running]: runtime.systemstack_switch() /usr/lib/go-1.15/src/runtime/asm_386.s:352 fp=0x8cf3ccc sp=0x8cf3cc8 pc=0x80a6ea0 runtime.mallocgc(0x40000004, 0x81cacc0, 0x8200e01, 0x81aa3e7) /usr/lib/go-1.15/src/runtime/malloc.go:1070 +0x6bc fp=0x8cf3d1c sp=0x8cf3ccc pc=0x805333c runtime.makeslice(0x81cacc0, 0x10000001, 0x10000001, 0x8cf3d48) /usr/lib/go-1.15/src/runtime/slice.go:98 +0x4f fp=0x8cf3d30 sp=0x8cf3d1c pc=0x808dccf github.com/biogo/biogo/index/kmerindex.New(0xe, 0x8c99540, 0x5, 0x81c9940, 0x8310948) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/github.com/biogo/biogo/index/kmerindex/kmerindex.go:71 +0x93 fp=0x8cf3d58 sp=0x8cf3d30 pc=0x81a9203 github.com/biogo/biogo/index/kmerindex.(*S).TestKmerIndexCheck(0x8c9c268, 0x8cec0a0) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/github.com/biogo/biogo/index/kmerindex/kmerindex_test.go:43 +0x4a fp=0x8cf3dbc sp=0x8cf3d58 pc=0x81aa75a runtime.call16(0x8c10020, 0x8d52048, 0x8c0e040, 0x8, 0x8) /usr/lib/go-1.15/src/runtime/asm_386.s:561 +0x30 fp=0x8cf3dd0 sp=0x8cf3dbc pc=0x80a71b0 reflect.Value.call(0x81ef7c0, 0x8c9c268, 0x8213, 0x81f4d2a, 0x4, 0x9488788, 0x1, 0x1, 0x831a3c0, 0x6ce00351, ...) /usr/lib/go-1.15/src/reflect/value.go:476 +0x6ed fp=0x8cf3eec sp=0x8cf3dd0 pc=0x80f22ed reflect.Value.Call(0x81ef7c0, 0x8c9c268, 0x8213, 0x9488788, 0x1, 0x1, 0x0, 0x0, 0x0) /usr/lib/go-1.15/src/reflect/value.go:337 +0x7a fp=0x8cf3f28 sp=0x8cf3eec pc=0x80f1a5a gopkg.in/check%2ev1.(*suiteRunner).forkTest.func1(0x8cec0a0) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:781 +0x57b fp=0x8cf3fbc sp=0x8cf3f28 pc=0x81a4cfb gopkg.in/check%2ev1.(*suiteRunner).forkCall.func1(0x8ce60a0, 0x8cec0a0, 0x8d4b750) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:675 +0x83 fp=0x8cf3fe0 sp=0x8cf3fbc pc=0x81a45e3 runtime.goexit() /usr/lib/go-1.15/src/runtime/asm_386.s:1333 +0x1 fp=0x8cf3fe4 sp=0x8cf3fe0 pc=0x80a83e1 created by gopkg.in/check%2ev1.(*suiteRunner).forkCall /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:672 +0x17e goroutine 1 [chan receive]: testing.(*T).Run(0x8c82a80, 0x81f4d7e, 0x4, 0x8200ee4, 0x402) /usr/lib/go-1.15/src/testing/testing.go:1169 +0x230 testing.runTests.func1(0x8c829a0) /usr/lib/go-1.15/src/testing/testing.go:1439 +0x5a testing.tRunner(0x8c829a0, 0x8c93eec) /usr/lib/go-1.15/src/testing/testing.go:1123 +0xc4 testing.runTests(0x8c96060, 0x8315d60, 0x1, 0x1, 0x18dbd86e, 0xc1621557, 0xb2dccb52, 0x8b, 0x831a3c0, 0x0) /usr/lib/go-1.15/src/testing/testing.go:1437 +0x25a testing.(*M).Run(0x8ce6000, 0x0) /usr/lib/go-1.15/src/testing/testing.go:1345 +0x178 main.main() _testmain.go:43 +0x104 goroutine 20 [chan receive]: gopkg.in/check%2ev1.(*suiteRunner).runTest(...) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:819 gopkg.in/check%2ev1.(*suiteRunner).run(0x8ce60a0, 0x8c9c268) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:624 +0xf7 gopkg.in/check%2ev1.Run(0x81ef7c0, 0x8c9c268, 0x8c3c778, 0x82b74e0) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/run.go:92 +0x3d gopkg.in/check%2ev1.RunAll(0x8cf2f78, 0x0) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/run.go:84 +0x80 gopkg.in/check%2ev1.TestingT(0x8c82a80) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/run.go:72 +0x2d9 github.com/biogo/biogo/index/kmerindex.Test(0x8c82a80) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/github.com/biogo/biogo/index/kmerindex/kmerindex_test.go:20 +0x21 testing.tRunner(0x8c82a80, 0x8200ee4) /usr/lib/go-1.15/src/testing/testing.go:1123 +0xc4 created by testing.(*T).Run /usr/lib/go-1.15/src/testing/testing.go:1168 +0x211 goroutine 21 [select]: gopkg.in/check%2ev1.(*resultTracker)._loopRoutine(0x8ce6050) /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:470 +0x95 created by gopkg.in/check%2ev1.(*resultTracker).start /build/reproducible-path/golang-github-biogo-biogo-1.0.3/_build/src/gopkg.in/check.v1/check.go:450 +0x33 FAIL github.com/biogo/biogo/index/kmerindex 1.810s === RUN Test OK: 2 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/featio 0.011s === RUN Test OK: 4 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/featio/bed 0.017s === RUN Test OK: 5 passed --- PASS: Test (0.03s) PASS ok github.com/biogo/biogo/io/featio/gff 0.042s === RUN TestSeqio --- PASS: TestSeqio (0.00s) === RUN Test OK: 3 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/io/seqio 0.018s === RUN Test OK: 2 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/seqio/alignio 0.011s === RUN Test OK: 1 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/seqio/fai 0.021s === RUN Test OK: 2 passed --- PASS: Test (0.01s) === RUN ExampleReader --- PASS: ExampleReader (0.00s) PASS ok github.com/biogo/biogo/io/seqio/fasta 0.020s === RUN Test OK: 2 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/io/seqio/fastq 0.010s === RUN Test OK: 7 passed --- PASS: Test (2.55s) PASS ok github.com/biogo/biogo/morass 2.559s ? github.com/biogo/biogo/pwm [no test files] === RUN TestSeq --- PASS: TestSeq (0.00s) PASS ok github.com/biogo/biogo/seq 0.008s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleNewSeq --- PASS: ExampleNewSeq (0.00s) === RUN ExampleSeq_Add --- PASS: ExampleSeq_Add (0.00s) === RUN ExampleSeq_Clone --- PASS: ExampleSeq_Clone (0.00s) === RUN ExampleSeq_Rows --- PASS: ExampleSeq_Rows (0.00s) === RUN ExampleSeq_join --- PASS: ExampleSeq_join (0.00s) === RUN ExampleSeq_Len --- PASS: ExampleSeq_Len (0.00s) === RUN ExampleSeq_RevComp --- PASS: ExampleSeq_RevComp (0.00s) === RUN ExampleSeq_stitch --- PASS: ExampleSeq_stitch (0.00s) === RUN ExampleSeq_truncate --- PASS: ExampleSeq_truncate (0.00s) === RUN ExampleNewQSeq --- PASS: ExampleNewQSeq (0.00s) === RUN ExampleQSeq_Add --- PASS: ExampleQSeq_Add (0.00s) === RUN ExampleQSeq_Clone --- PASS: ExampleQSeq_Clone (0.00s) === RUN ExampleQSeq_Rows --- PASS: ExampleQSeq_Rows (0.00s) === RUN ExampleQSeq_join --- PASS: ExampleQSeq_join (0.00s) === RUN ExampleQSeq_Len --- PASS: ExampleQSeq_Len (0.00s) === RUN ExampleQSeq_RevComp --- PASS: ExampleQSeq_RevComp (0.00s) === RUN ExampleQSeq_stitch --- PASS: ExampleQSeq_stitch (0.00s) === RUN ExampleQSeq_truncate --- PASS: ExampleQSeq_truncate (0.00s) PASS ok github.com/biogo/biogo/seq/alignment 0.011s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleNewQSeq --- PASS: ExampleNewQSeq (0.00s) === RUN ExampleQSeq_Validate --- PASS: ExampleQSeq_Validate (0.00s) === RUN ExampleQSeq_AppendQLetters --- PASS: ExampleQSeq_AppendQLetters (0.00s) === RUN ExampleNewSeq --- PASS: ExampleNewSeq (0.00s) === RUN ExampleSeq_Validate --- PASS: ExampleSeq_Validate (0.00s) === RUN ExampleSeq_truncate_a --- PASS: ExampleSeq_truncate_a (0.00s) === RUN ExampleSeq_truncate_b --- PASS: ExampleSeq_truncate_b (0.00s) === RUN ExampleSeq_RevComp --- PASS: ExampleSeq_RevComp (0.00s) === RUN ExampleSeq_join --- PASS: ExampleSeq_join (0.00s) === RUN ExampleSeq_stitch --- PASS: ExampleSeq_stitch (0.00s) === RUN ExampleSeq_compose --- PASS: ExampleSeq_compose (0.00s) PASS ok github.com/biogo/biogo/seq/linear 0.011s === RUN Test OK: 1 passed --- PASS: Test (0.00s) === RUN ExampleNewMulti --- PASS: ExampleNewMulti (0.00s) === RUN ExampleMulti_Add --- PASS: ExampleMulti_Add (0.00s) === RUN ExampleMulti_Clone --- PASS: ExampleMulti_Clone (0.00s) === RUN ExampleMulti_Rows --- PASS: ExampleMulti_Rows (0.00s) === RUN ExampleMulti_IsFlush --- PASS: ExampleMulti_IsFlush (0.00s) === RUN ExampleMulti_Join --- PASS: ExampleMulti_Join (0.00s) === RUN ExampleMulti_Len --- PASS: ExampleMulti_Len (0.00s) === RUN ExampleMulti_RevComp --- PASS: ExampleMulti_RevComp (0.00s) === RUN ExampleMulti_Stitch --- PASS: ExampleMulti_Stitch (0.00s) === RUN ExampleMulti_Truncate --- PASS: ExampleMulti_Truncate (0.00s) === RUN ExampleSet_AppendEach --- PASS: ExampleSet_AppendEach (0.00s) === RUN ExampleSet_Rows --- PASS: ExampleSet_Rows (0.00s) === RUN ExampleSet_Row --- PASS: ExampleSet_Row (0.00s) === RUN ExampleSet_Len --- PASS: ExampleSet_Len (0.00s) PASS ok github.com/biogo/biogo/seq/multi 0.011s === RUN Test OK: 1 passed --- PASS: Test (0.00s) PASS ok github.com/biogo/biogo/seq/quality 0.014s === RUN Test OK: 4 passed --- PASS: Test (0.00s) === RUN ExampleTruncate_a --- PASS: ExampleTruncate_a (0.00s) === RUN ExampleTruncate_b --- PASS: ExampleTruncate_b (0.00s) === RUN ExampleJoin --- PASS: ExampleJoin (0.00s) === RUN ExampleStitch --- PASS: ExampleStitch (0.00s) PASS ok github.com/biogo/biogo/seq/sequtils 0.008s === RUN Test OK: 11 passed --- PASS: Test (0.01s) PASS ok github.com/biogo/biogo/util 0.019s FAIL dh_auto_test: error: cd _build && go test -vet=off -v -p 7 github.com/biogo/biogo github.com/biogo/biogo/align github.com/biogo/biogo/align/matrix github.com/biogo/biogo/align/pals github.com/biogo/biogo/align/pals/dp github.com/biogo/biogo/align/pals/filter github.com/biogo/biogo/alphabet github.com/biogo/biogo/complexity github.com/biogo/biogo/concurrent github.com/biogo/biogo/errors github.com/biogo/biogo/feat github.com/biogo/biogo/feat/gene github.com/biogo/biogo/feat/genome github.com/biogo/biogo/feat/genome/cow/bt7 github.com/biogo/biogo/feat/genome/drosophila/dm3 github.com/biogo/biogo/feat/genome/human/hg19 github.com/biogo/biogo/feat/genome/mouse/mm10 github.com/biogo/biogo/index/kmerindex github.com/biogo/biogo/io/featio github.com/biogo/biogo/io/featio/bed github.com/biogo/biogo/io/featio/gff github.com/biogo/biogo/io/seqio github.com/biogo/biogo/io/seqio/alignio github.com/biogo/biogo/io/seqio/fai github.com/biogo/biogo/io/seqio/fasta github.com/biogo/biogo/io/seqio/fastq github.com/biogo/biogo/morass github.com/biogo/biogo/pwm github.com/biogo/biogo/seq github.com/biogo/biogo/seq/alignment github.com/biogo/biogo/seq/linear github.com/biogo/biogo/seq/multi github.com/biogo/biogo/seq/quality github.com/biogo/biogo/seq/sequtils github.com/biogo/biogo/util returned exit code 1 make: *** [debian/rules:4: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: user script /srv/workspace/pbuilder/1370/tmp/hooks/C01_cleanup starting debug output: disk usage on i-capture-the-hostname at Wed Jan 17 13:52:08 UTC 2024 Filesystem Size Used Avail Use% Mounted on tmpfs 4.0G 0 4.0G 0% /dev/shm I: user script /srv/workspace/pbuilder/1370/tmp/hooks/C01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1370 and its subdirectories