I: pbuilder: network access will be disabled during build I: Current time: Tue Aug 24 03:44:55 -12 2021 I: pbuilder-time-stamp: 1629819895 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libpdl-io-hdf5-perl_0.73-6.dsc] I: copying [./libpdl-io-hdf5-perl_0.73.orig.tar.gz] I: copying [./libpdl-io-hdf5-perl_0.73-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.oWiU_9bl/trustedkeys.kbx': General error gpgv: Signature made Wed Nov 18 18:17:08 2020 -12 gpgv: using RSA key 8182DE417056408D614650D16750F10AE88D4AF1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libpdl-io-hdf5-perl_0.73-6.dsc dpkg-source: info: extracting libpdl-io-hdf5-perl in libpdl-io-hdf5-perl-0.73 dpkg-source: info: unpacking libpdl-io-hdf5-perl_0.73.orig.tar.gz dpkg-source: info: unpacking libpdl-io-hdf5-perl_0.73-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove-interpreter-from-package.patch dpkg-source: info: applying clean_newFile_hd5.patch dpkg-source: info: applying support-hdf5-1.8.13.patch dpkg-source: info: applying reproducible_build.patch dpkg-source: info: applying spelling-errors.patch dpkg-source: info: applying hdf5-1.10.patch dpkg-source: info: applying hdf5-1.10.3.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21598/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='6fb19290be5d4d3982ecfc5047869776' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21598' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.m40eryOFpt/pbuilderrc_DlCn --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.m40eryOFpt/b1 --logfile b1/build.log libpdl-io-hdf5-perl_0.73-6.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux cbxi4a 5.10.0-8-armmp #1 SMP Debian 5.10.46-4 (2021-08-03) armv7l GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Jul 28 07:09 more -rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount -rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 20 21:28 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jul 28 07:09 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 2021 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/21598/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), libhdf5-dev, pdl (>= 1:2.016), perl-xs-dev, perl:native dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on pdl (>= 1:2.016); however: Package pdl is not installed. pbuilder-satisfydepends-dummy depends on perl-xs-dev; however: Package perl-xs-dev is not installed. pbuilder-satisfydepends-dummy depends on perl:native. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbrotli1{a} libbsd0{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgd3{a} libgfortran5{a} libgsl25{a} libgslcblas0{a} libhdf4-0-alt{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu67{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libncurses6{a} libperl-dev{a} libpipeline1{a} libpng16-16{a} libpod-parser-perl{a} libsigsegv2{a} libsub-override-perl{a} libsz2{a} libterm-readkey-perl{a} libtiff5{a} libtool{a} libuchardet0{a} libwebp6{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} libxpm4{a} m4{a} man-db{a} pdl{a} po-debconf{a} sensible-utils{a} ucf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libgpm2 libltdl-dev libmail-sendmail-perl libterm-readline-gnu-perl libterm-readline-perl-perl lynx wget 0 packages upgraded, 76 newly installed, 0 to remove and 0 not upgraded. Need to get 33.1 MB of archives. After unpacking 107 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf libterm-readkey-perl armhf 2.38-1+b2 [26.6 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libpod-parser-perl all 1.63-2 [96.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libpng16-16 armhf 1.6.37-3 [277 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [357 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf ucf all 3.0043 [74.0 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf fonts-dejavu-core all 2.37-2 [1069 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf fontconfig-config all 2.13.1-4.2 [281 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf libfontconfig1 armhf 2.13.1-4.2 [329 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libdeflate0 armhf 1.7-1 [43.1 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libwebp6 armhf 0.6.1-2.1 [226 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libtiff5 armhf 4.2.0-1 [271 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.2-1 [311 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.2-1 [713 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf libxpm4 armhf 1:3.5.12-1 [44.0 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libgd3 armhf 2.3.0-2 [119 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf libgslcblas0 armhf 2.6+dfsg-2 [80.0 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libgsl25 armhf 2.6+dfsg-2 [769 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libhdf4-0-alt armhf 4.2.15-3 [244 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libncurses6 armhf 6.2+20201114-2 [80.5 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf pdl armhf 1:2.025-1 [3401 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 55 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf hdf5-helpers armhf 1.10.6+repack-4 [40.4 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libaec0 armhf 1.0.4-1 [20.4 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libsz2 armhf 1.0.4-1 [6616 B] Get: 65 http://deb.debian.org/debian bullseye/main armhf libaec-dev armhf 1.0.4-1 [18.3 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libhdf5-103-1 armhf 1.10.6+repack-4 [1178 kB] Get: 67 http://deb.debian.org/debian bullseye/main armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-4 [133 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf libhdf5-fortran-102 armhf 1.10.6+repack-4 [94.0 kB] Get: 69 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-100 armhf 1.10.6+repack-4 [80.5 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-4 [51.2 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-4 [37.4 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 73 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo-dev armhf 1:2.0.6-4 [242 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf libjpeg-dev armhf 1:2.0.6-4 [67.8 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf libhdf5-dev armhf 1.10.6+repack-4 [2444 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf libperl-dev armhf 5.32.1-4 [969 kB] Fetched 33.1 MB in 5s (6494 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_armhf.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libterm-readkey-perl. Preparing to unpack .../05-libterm-readkey-perl_2.38-1+b2_armhf.deb ... Unpacking libterm-readkey-perl (2.38-1+b2) ... Selecting previously unselected package libpod-parser-perl. Preparing to unpack .../06-libpod-parser-perl_1.63-2_all.deb ... Adding 'diversion of /usr/bin/podselect to /usr/bin/podselect.bundled by libpod-parser-perl' Adding 'diversion of /usr/share/man/man1/podselect.1.gz to /usr/share/man/man1/podselect.bundled.1.gz by libpod-parser-perl' Unpacking libpod-parser-perl (1.63-2) ... Selecting previously unselected package sensible-utils. 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Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libhdf5-103-1:armhf (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libhdf5-cpp-103-1:armhf (1.10.6+repack-4) ... Setting up libx11-6:armhf (2:1.7.2-1) ... Setting up libhdf5-hl-100:armhf (1.10.6+repack-4) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libhdf5-hl-cpp-100:armhf (1.10.6+repack-4) ... Setting up libhdf5-fortran-102:armhf (1.10.6+repack-4) ... Setting up libhdf5-hl-fortran-100:armhf (1.10.6+repack-4) ... Setting up libfontconfig1:armhf (2.13.1-4.2) ... Setting up debhelper (13.3.4) ... Setting up libhdf5-dev (1.10.6+repack-4) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgd3:armhf (2.3.0-2) ... Setting up pdl (1:2.025-1) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libpdl-io-hdf5-perl-0.73/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libpdl-io-hdf5-perl_0.73-6_source.changes dpkg-buildpackage: info: source package libpdl-io-hdf5-perl dpkg-buildpackage: info: source version 1:0.73-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bas Couwenberg dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/build/libpdl-io-hdf5-perl-0.73=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/build/libpdl-io-hdf5-perl-0.73=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now" testing /lib/libhdf5.so testing /lib/libhdf5_serial.so testing /lib/libhdf5.dll.a testing /lib/libhdf5.a testing /lib64/libhdf5.so testing /lib64/libhdf5_serial.so testing /lib64/libhdf5.dll.a testing /lib64/libhdf5.a testing /usr/lib/arm-linux-gnueabihf/libhdf5.so testing /usr/lib/arm-linux-gnueabihf/libhdf5_serial.so Found libhdf5_serial.so at /usr/lib/arm-linux-gnueabihf/libhdf5_serial.so Found hdf5.h at /usr/include/hdf5/serial/hdf5.h Defining bool=int (linux seems to need this) Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for PDL::IO::HDF5 Writing MYMETA.yml and MYMETA.json dh_auto_build make -j3 make[1]: Entering directory '/build/libpdl-io-hdf5-perl-0.73' "/usr/bin/perl" "-I/usr/lib/arm-linux-gnueabihf/perl5/5.32" "-MPDL::PP qw[PDL::IO::HDF5 PDL::IO::HDF5 HDF5]" hdf5.pd Running Mkbootstrap for HDF5 () chmod 644 "HDF5.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- HDF5.bs blib/arch/auto/PDL/IO/HDF5/HDF5.bs 644 touch HDF5.xs "/usr/bin/perl" "/usr/share/perl/5.32/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.32/ExtUtils/typemap' -typemap '/usr/lib/arm-linux-gnueabihf/perl5/5.32/PDL/Core/typemap.pdl' -typemap '/build/libpdl-io-hdf5-perl-0.73/typemap' HDF5.xs > HDF5.xsc cp HDF5/tkview.pm blib/lib/PDL/IO/HDF5/tkview.pm cp HDF5/Dataset.pm blib/lib/PDL/IO/HDF5/Dataset.pm cp HDF5/Group.pm blib/lib/PDL/IO/HDF5/Group.pm cp HDF5.pm blib/lib/PDL/IO/HDF5.pm mv HDF5.xsc HDF5.c arm-linux-gnueabihf-gcc -c "-I/usr/lib/arm-linux-gnueabihf/perl5/5.32/PDL/Core" -I/usr/include/hdf5/serial -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Dbool=int -DH5_USE_16_API -g -g -O2 -fdebug-prefix-map=/build/libpdl-io-hdf5-perl-0.73=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"0.73\" -DXS_VERSION=\"0.73\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.32/CORE" HDF5.c HDF5.xs: In function 'boot_PDL__IO__HDF5': HDF5.xs:2190:23: warning: format '%d' expects argument of type 'int', but argument 3 has type 'I32' {aka 'long int'} [-Wformat=] 2190 | Perl_croak(aTHX_ "[PDL->Version: %d PDL_CORE_VERSION: %d XS_VERSION: %s] PDL::IO::HDF5 needs to be recompiled against the newly installed PDL", PDL->Version, PDL_CORE_VERSION, XS_VERSION); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ | | | I32 {aka long int} rm -f blib/arch/auto/PDL/IO/HDF5/HDF5.so arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/build/libpdl-io-hdf5-perl-0.73=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -shared -L/usr/local/lib -fstack-protector-strong HDF5.o -o blib/arch/auto/PDL/IO/HDF5/HDF5.so \ -L/usr/lib/arm-linux-gnueabihf -lhdf5_serial -lm \ chmod 755 blib/arch/auto/PDL/IO/HDF5/HDF5.so Manifying 4 pod documents make[1]: Leaving directory '/build/libpdl-io-hdf5-perl-0.73' dh_auto_test make -j3 test TEST_VERBOSE=1 make[1]: Entering directory '/build/libpdl-io-hdf5-perl-0.73' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- HDF5.bs blib/arch/auto/PDL/IO/HDF5/HDF5.bs 644 PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/attribPDL.t ..... 1..13 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok t/file.t .......... 1..3 ok 1 ok 2 ok 3 ok t/group.t ......... 1..17 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok t/reference.t ..... 1..2 ok 1 ok 2 ok t/total.t ......... 1..33 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ok 25 ok 26 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok HDF5-DIAG: Error detected in HDF5 (1.10.6) thread 3069366288: #000: ../../../src/H5Ddeprec.c line 257 in H5Dextend(): unable to extend dataset major: Dataset minor: Unable to initialize object #001: ../../../src/H5Dint.c line 2784 in H5D__set_extent(): dataset has contiguous storage major: Invalid arguments to routine minor: Out of range Error extending dataset in PDL::IO::HDF5::Dataset:set at t/unlink.t line 22. t/unlink.t ........ 1..2 ok 1 ok 2 ok t/vlenString.t .... 1..6 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok # xdata '[2 3 4 5 6 7 8 9 10 11 12]' # xdata '[2 3 4 5 6 7 8 9 10 11 12 13 14]' t/xData.t ......... 1..2 ok 1 ok 2 ok t/ztotal_index.t .. 1..7 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok All tests successful. Files=9, Tests=85, 27 wallclock secs ( 0.38 usr 0.08 sys + 17.24 cusr 1.97 csys = 19.67 CPU) Result: PASS make[1]: Leaving directory '/build/libpdl-io-hdf5-perl-0.73' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j3 install DESTDIR=/build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libpdl-io-hdf5-perl-0.73' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- HDF5.bs blib/arch/auto/PDL/IO/HDF5/HDF5.bs 644 Manifying 4 pod documents Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/lib/arm-linux-gnueabihf/perl5/5.32/auto/PDL/IO/HDF5/HDF5.so Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/lib/arm-linux-gnueabihf/perl5/5.32/PDL/IO/HDF5.pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/lib/arm-linux-gnueabihf/perl5/5.32/PDL/IO/HDF5/Group.pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/lib/arm-linux-gnueabihf/perl5/5.32/PDL/IO/HDF5/tkview.pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/lib/arm-linux-gnueabihf/perl5/5.32/PDL/IO/HDF5/Dataset.pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/share/man/man3/PDL::IO::HDF5::Group.3pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/share/man/man3/PDL::IO::HDF5::Dataset.3pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/share/man/man3/PDL::IO::HDF5.3pm Installing /build/libpdl-io-hdf5-perl-0.73/debian/libpdl-io-hdf5-perl/usr/share/man/man3/PDL::IO::HDF5::tkview.3pm Updating PDL documentation database... "/usr/bin/perl" -e 'exit if $ENV{DESTDIR}; use PDL::Doc; eval { PDL::Doc::add_module(q{PDL::IO::HDF5}); }' -- make[1]: Leaving directory '/build/libpdl-io-hdf5-perl-0.73' dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/libpdl-io-hdf5-perl-0.73' dh_installchangelogs -k Release_Notes make[1]: Leaving directory '/build/libpdl-io-hdf5-perl-0.73' dh_installman dh_lintian debian/rules override_dh_perl make[1]: Entering directory '/build/libpdl-io-hdf5-perl-0.73' dh_perl dh_pdl make[1]: Leaving directory '/build/libpdl-io-hdf5-perl-0.73' dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libpdl-io-hdf5-perl' in '../libpdl-io-hdf5-perl_0.73-6_armhf.deb'. dpkg-deb: building package 'libpdl-io-hdf5-perl-dbgsym' in '../libpdl-io-hdf5-perl-dbgsym_0.73-6_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libpdl-io-hdf5-perl_0.73-6_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21598 and its subdirectories I: Current time: Tue Aug 24 03:52:22 -12 2021 I: pbuilder-time-stamp: 1629820342