I: pbuilder: network access will be disabled during build I: Current time: Sat Feb 8 21:29:31 +14 2025 I: pbuilder-time-stamp: 1738999771 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [suitesparse_5.8.1+dfsg-2.dsc] I: copying [./suitesparse_5.8.1+dfsg.orig.tar.xz] I: copying [./suitesparse_5.8.1+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.VgBUtkCb/trustedkeys.kbx': General error gpgv: Signature made Thu Jul 30 08:06:56 2020 gpgv: using RSA key 53951D95272E0C5B82BE8C4A2CECE9350ECEBE4A gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./suitesparse_5.8.1+dfsg-2.dsc dpkg-source: info: extracting suitesparse in suitesparse-5.8.1+dfsg dpkg-source: info: unpacking suitesparse_5.8.1+dfsg.orig.tar.xz dpkg-source: info: unpacking suitesparse_5.8.1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying buildflags.patch dpkg-source: info: applying mongoose-build.patch dpkg-source: info: applying graphblas-build.patch dpkg-source: info: applying libatomic.patch dpkg-source: info: applying sliplu-doc.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Feb 8 07:29 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' DIRSTACK=() DISTRIBUTION=bullseye EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=1cc1a2d15910496697ff3e55842008cd LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2271444 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.yxlugZ4I/pbuilderrc_k9WB --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.yxlugZ4I/b2 --logfile b2/build.log suitesparse_5.8.1+dfsg-2.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.104:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Mar 27 2022 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 7 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 7 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 64856 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 182496 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 93744 Apr 10 2022 gzip -rwxr-xr-x 1 root root 18440 Nov 7 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 157864 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Jan 20 2022 more -rwsr-xr-x 1 root root 51360 Jan 20 2022 mount -rwxr-xr-x 1 root root 14496 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 7 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 9 Feb 8 07:29 sh -> /bin/bash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jan 20 2022 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30880 Jan 20 2022 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 7 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), gfortran, libblas-dev, liblapack-dev, libmetis-dev, libgmp-dev, libmpfr-dev, cmake, texlive-latex-extra, texlive-plain-generic, texlive-bibtex-extra, texlive-fonts-extra, ghostscript, texlive-science, texlive-xetex dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 17734 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmetis-dev; however: Package libmetis-dev is not installed. pbuilder-satisfydepends-dummy depends on libgmp-dev; however: Package libgmp-dev is not installed. pbuilder-satisfydepends-dummy depends on libmpfr-dev; however: Package libmpfr-dev is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on texlive-bibtex-extra; however: Package texlive-bibtex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-extra; however: Package texlive-fonts-extra is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on texlive-science; however: Package texlive-science is not installed. pbuilder-satisfydepends-dummy depends on texlive-xetex; however: Package texlive-xetex is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-gfs-baskerville{a} fonts-gfs-porson{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} ghostscript{a} groff-base{a} intltool-debian{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2{a} libcurl4{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontbox-java{a} libfontconfig1{a} libfreetype6{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgs9{a} libgs9-common{a} libharfbuzz0b{a} libice6{a} libicu67{a} libidn11{a} libijs-0.35{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjsoncpp24{a} libkpathsea6{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmetis-dev{a} libmetis5{a} libmpdec3{a} libmpfr-dev{a} libncurses6{a} libnghttp2-14{a} libopenjp2-7{a} libpaper-utils{a} libpaper1{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libprocps8{a} libpsl5{a} libptexenc1{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsm6{a} libssh2-1{a} libsub-override-perl{a} libsynctex2{a} libteckit0{a} libtexlua53{a} libtiff5{a} libtool{a} libuchardet0{a} libuv1{a} libwebp6{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6{a} libzzip-0-13{a} m4{a} man-db{a} media-types{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} t1utils{a} teckit{a} tex-common{a} texlive-base{a} texlive-bibtex-extra{a} texlive-binaries{a} texlive-fonts-extra{a} texlive-fonts-recommended{a} texlive-lang-greek{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} texlive-plain-generic{a} texlive-science{a} texlive-xetex{a} tipa{a} tzdata{a} ucf{a} x11-common{a} xdg-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus dvisvgm fonts-adf-accanthis fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell fonts-comfortaa fonts-croscore fonts-crosextra-caladea fonts-crosextra-carlito fonts-dejavu-extra fonts-droid-fallback fonts-ebgaramond fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-junicode fonts-lato fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans fonts-roboto-unhinted fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libx11-protocol-perl lmodern lynx psmisc publicsuffix ruby shared-mime-info tex-gyre texlive-fonts-extra-links tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 160 newly installed, 0 to remove and 0 not upgraded. Need to get 854 MB of archives. After unpacking 2302 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-8+deb11u1 [142 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 poppler-data all 0.4.10-1 [1602 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-minimal arm64 3.9.2-1 [797 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2+deb11u5 [84.1 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 python3.9-minimal arm64 3.9.2-1 [1884 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 python3-minimal arm64 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 tzdata all 2021a-1+deb11u10 [286 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 libmpdec3 arm64 2.5.1-1 [84.4 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-stdlib arm64 3.9.2-1 [1658 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 python3.9 arm64 3.9.2-1 [466 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 libpython3-stdlib arm64 3.9.2-3 [21.4 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 python3 arm64 3.9.2-3 [37.9 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 ucf all 3.0043 [74.0 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 tex-common all 6.16 [53.7 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2+deb11u2 [93.1 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 libprocps8 arm64 2:3.3.17-5 [61.9 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 procps arm64 2:3.3.17-5 [497 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3+deb11u1 [273 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3+deb11u1 [123 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3+deb11u1 [69.2 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 cmake-data all 3.18.4-2+deb11u1 [1725 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7+deb11u4 [629 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libarchive13 arm64 3.4.3-2+deb11u1 [320 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2.1+deb11u1 [69.4 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2.1+deb11u1 [105 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libldap-2.4-2 arm64 2.4.57+dfsg-3+deb11u1 [222 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 libssh2-1 arm64 1.9.0-2 [150 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 libcurl4 arm64 7.74.0-1.3+deb11u9 [326 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 libjsoncpp24 arm64 1.9.4-4 [72.5 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 librhash0 arm64 1.4.1-2 [127 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libuv1 arm64 1.40.0-2 [126 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 cmake arm64 3.18.4-2+deb11u1 [3673 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 fonts-dejavu-core all 2.37-2 [1069 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 fonts-urw-base35 all 20200910-1 [6367 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 fonts-gfs-baskerville all 1.1-6 [43.7 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 fonts-gfs-porson all 1.1-7 [33.8 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 fonts-lmodern all 2.004.5-6.1 [4540 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 gfortran arm64 4:10.2.1-1 [1424 B] Get: 76 http://deb.debian.org/debian bullseye/main arm64 libgs9-common all 9.53.3~dfsg-7+deb11u6 [735 kB] Get: 77 http://deb.debian.org/debian bullseye/main arm64 libavahi-common-data arm64 0.8-5+deb11u2 [124 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libavahi-common3 arm64 0.8-5+deb11u2 [57.5 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libdbus-1-3 arm64 1.12.28-0+deb11u1 [213 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libavahi-client3 arm64 0.8-5+deb11u2 [61.0 kB] Get: 81 http://deb.debian.org/debian bullseye/main arm64 libcups2 arm64 2.3.3op2-3+deb11u6 [334 kB] Get: 82 http://deb.debian.org/debian bullseye/main arm64 libpng16-16 arm64 1.6.37-3 [289 kB] Get: 83 http://deb.debian.org/debian bullseye/main arm64 libfreetype6 arm64 2.10.4+dfsg-1+deb11u1 [393 kB] Get: 84 http://deb.debian.org/debian bullseye/main arm64 libfontconfig1 arm64 2.13.1-4.2 [344 kB] Get: 85 http://deb.debian.org/debian bullseye/main arm64 libidn11 arm64 1.33-3 [115 kB] Get: 86 http://deb.debian.org/debian bullseye/main arm64 libijs-0.35 arm64 0.35-15 [15.8 kB] Get: 87 http://deb.debian.org/debian bullseye/main arm64 libjbig2dec0 arm64 0.19-2 [62.5 kB] Get: 88 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 89 http://deb.debian.org/debian bullseye/main arm64 liblcms2-2 arm64 2.12~rc1-2 [140 kB] Get: 90 http://deb.debian.org/debian bullseye/main arm64 libopenjp2-7 arm64 2.4.0-3 [160 kB] Get: 91 http://deb.debian.org/debian bullseye/main arm64 libpaper1 arm64 1.1.28+b1 [21.4 kB] Get: 92 http://deb.debian.org/debian bullseye/main arm64 libdeflate0 arm64 1.7-1 [47.7 kB] Get: 93 http://deb.debian.org/debian bullseye/main arm64 libjbig0 arm64 2.1-3.1+b2 [27.8 kB] Get: 94 http://deb.debian.org/debian bullseye/main arm64 libwebp6 arm64 0.6.1-2.1+deb11u2 [244 kB] Get: 95 http://deb.debian.org/debian bullseye/main arm64 libtiff5 arm64 4.2.0-1+deb11u4 [278 kB] Get: 96 http://deb.debian.org/debian bullseye/main arm64 libgs9 arm64 9.53.3~dfsg-7+deb11u6 [2071 kB] Get: 97 http://deb.debian.org/debian bullseye/main arm64 ghostscript arm64 9.53.3~dfsg-7+deb11u6 [98.3 kB] Get: 98 http://deb.debian.org/debian bullseye/main arm64 libapache-pom-java all 18-1 [4676 B] Get: 99 http://deb.debian.org/debian bullseye/main arm64 libblas3 arm64 3.9.0-3+deb11u1 [100 kB] Get: 100 http://deb.debian.org/debian bullseye/main arm64 libblas-dev arm64 3.9.0-3+deb11u1 [106 kB] Get: 101 http://deb.debian.org/debian bullseye/main arm64 libmd0 arm64 1.0.3-3 [27.9 kB] Get: 102 http://deb.debian.org/debian bullseye/main arm64 libbsd0 arm64 0.11.3-1+deb11u1 [106 kB] Get: 103 http://deb.debian.org/debian bullseye/main arm64 libpixman-1-0 arm64 0.40.0-1.1~deb11u1 [445 kB] Get: 104 http://deb.debian.org/debian bullseye/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 105 http://deb.debian.org/debian bullseye/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 106 http://deb.debian.org/debian bullseye/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get: 107 http://deb.debian.org/debian bullseye/main arm64 libx11-data all 2:1.7.2-1+deb11u1 [311 kB] Get: 108 http://deb.debian.org/debian bullseye/main arm64 libx11-6 arm64 2:1.7.2-1+deb11u1 [749 kB] Get: 109 http://deb.debian.org/debian bullseye/main arm64 libxcb-render0 arm64 1.14-3 [111 kB] Get: 110 http://deb.debian.org/debian bullseye/main arm64 libxcb-shm0 arm64 1.14-3 [101 kB] Get: 111 http://deb.debian.org/debian bullseye/main arm64 libxext6 arm64 2:1.3.3-1.1 [51.6 kB] Get: 112 http://deb.debian.org/debian bullseye/main arm64 libxrender1 arm64 1:0.9.10-1 [30.4 kB] Get: 113 http://deb.debian.org/debian bullseye/main arm64 libcairo2 arm64 1.16.0-5 [648 kB] Get: 114 http://deb.debian.org/debian bullseye/main arm64 libcommons-parent-java all 43-1 [10.8 kB] Get: 115 http://deb.debian.org/debian bullseye/main arm64 libcommons-logging-java all 1.2-2 [62.2 kB] Get: 116 http://deb.debian.org/debian bullseye/main arm64 libfontbox-java all 1:1.8.16-2 [211 kB] Get: 117 http://deb.debian.org/debian bullseye/main arm64 libglib2.0-0 arm64 2.66.8-1 [1286 kB] Get: 118 http://deb.debian.org/debian bullseye/main arm64 libgmpxx4ldbl arm64 2:6.2.1+dfsg-1+deb11u1 [337 kB] Get: 119 http://deb.debian.org/debian bullseye/main arm64 libgmp-dev arm64 2:6.2.1+dfsg-1+deb11u1 [625 kB] Get: 120 http://deb.debian.org/debian bullseye/main arm64 libgraphite2-3 arm64 1.3.14-1 [75.6 kB] Get: 121 http://deb.debian.org/debian bullseye/main arm64 libharfbuzz0b arm64 2.7.4-1 [1445 kB] Get: 122 http://deb.debian.org/debian bullseye/main arm64 x11-common all 1:7.7+22 [252 kB] Get: 123 http://deb.debian.org/debian bullseye/main arm64 libice6 arm64 2:1.0.10-1 [55.6 kB] Get: 124 http://deb.debian.org/debian bullseye/main arm64 libkpathsea6 arm64 2020.20200327.54578-7+deb11u1 [170 kB] Get: 125 http://deb.debian.org/debian bullseye/main arm64 liblapack3 arm64 3.9.0-3+deb11u1 [1538 kB] Get: 126 http://deb.debian.org/debian bullseye/main arm64 liblapack-dev arm64 3.9.0-3+deb11u1 [2743 kB] Get: 127 http://deb.debian.org/debian bullseye/main arm64 libmetis5 arm64 5.1.0.dfsg-7 [154 kB] Get: 128 http://deb.debian.org/debian bullseye/main arm64 libmetis-dev arm64 5.1.0.dfsg-7 [11.0 kB] Get: 129 http://deb.debian.org/debian bullseye/main arm64 libmpfr-dev arm64 4.1.0-3 [236 kB] Get: 130 http://deb.debian.org/debian bullseye/main arm64 libpaper-utils arm64 1.1.28+b1 [18.3 kB] Get: 131 http://deb.debian.org/debian bullseye/main arm64 libpdfbox-java all 1:1.8.16-2 [5205 kB] Get: 132 http://deb.debian.org/debian bullseye/main arm64 libptexenc1 arm64 2020.20200327.54578-7+deb11u1 [63.7 kB] Get: 133 http://deb.debian.org/debian bullseye/main arm64 libsm6 arm64 2:1.2.3-1 [34.0 kB] Get: 134 http://deb.debian.org/debian bullseye/main arm64 libsynctex2 arm64 2020.20200327.54578-7+deb11u1 [80.6 kB] Get: 135 http://deb.debian.org/debian bullseye/main arm64 libteckit0 arm64 2.5.10+ds1-3 [293 kB] Get: 136 http://deb.debian.org/debian bullseye/main arm64 libtexlua53 arm64 2020.20200327.54578-7+deb11u1 [124 kB] Get: 137 http://deb.debian.org/debian bullseye/main arm64 libxt6 arm64 1:1.2.0-1 [176 kB] Get: 138 http://deb.debian.org/debian bullseye/main arm64 libxmu6 arm64 2:1.1.2-2+b3 [57.8 kB] Get: 139 http://deb.debian.org/debian bullseye/main arm64 libxpm4 arm64 1:3.5.12-1.1~deb11u1 [47.2 kB] Get: 140 http://deb.debian.org/debian bullseye/main arm64 libxaw7 arm64 2:1.0.13-1.1 [184 kB] Get: 141 http://deb.debian.org/debian bullseye/main arm64 libxi6 arm64 2:1.7.10-1 [81.7 kB] Get: 142 http://deb.debian.org/debian bullseye/main arm64 libzzip-0-13 arm64 0.13.62-3.3+deb11u1 [55.4 kB] Get: 143 http://deb.debian.org/debian bullseye/main arm64 preview-latex-style all 12.2-1 [201 kB] Get: 144 http://deb.debian.org/debian bullseye/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get: 145 http://deb.debian.org/debian bullseye/main arm64 teckit arm64 2.5.10+ds1-3 [700 kB] Get: 146 http://deb.debian.org/debian bullseye/main arm64 texlive-binaries arm64 2020.20200327.54578-7+deb11u1 [7568 kB] Get: 147 http://deb.debian.org/debian bullseye/main arm64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 148 http://deb.debian.org/debian bullseye/main arm64 texlive-base all 2020.20210202-3 [20.8 MB] Get: 149 http://deb.debian.org/debian bullseye/main arm64 texlive-latex-base all 2020.20210202-3 [1120 kB] Get: 150 http://deb.debian.org/debian bullseye/main arm64 texlive-bibtex-extra all 2020.20210202-3 [67.2 MB] Get: 151 http://deb.debian.org/debian bullseye/main arm64 texlive-fonts-extra all 2020.20210202-3 [513 MB] Get: 152 http://deb.debian.org/debian bullseye/main arm64 texlive-fonts-recommended all 2020.20210202-3 [5002 kB] Get: 153 http://deb.debian.org/debian bullseye/main arm64 texlive-lang-greek all 2020.20210202-2 [77.6 MB] Get: 154 http://deb.debian.org/debian bullseye/main arm64 texlive-latex-recommended all 2020.20210202-3 [14.5 MB] Get: 155 http://deb.debian.org/debian bullseye/main arm64 texlive-pictures all 2020.20210202-3 [6743 kB] Get: 156 http://deb.debian.org/debian bullseye/main arm64 texlive-latex-extra all 2020.20210202-3 [13.7 MB] Get: 157 http://deb.debian.org/debian bullseye/main arm64 texlive-plain-generic all 2020.20210202-3 [27.0 MB] Get: 158 http://deb.debian.org/debian bullseye/main arm64 texlive-science all 2020.20210202-3 [3367 kB] Get: 159 http://deb.debian.org/debian bullseye/main arm64 tipa all 2:1.3-20.1 [2978 kB] Get: 160 http://deb.debian.org/debian bullseye/main arm64 texlive-xetex all 2020.20210202-3 [12.5 MB] Fetched 854 MB in 11s (77.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17734 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8+deb11u1_arm64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../1-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../3-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package poppler-data. Preparing to unpack .../5-poppler-data_0.4.10-1_all.deb ... Unpacking poppler-data (0.4.10-1) ... Selecting previously unselected package libpython3.9-minimal:arm64. Preparing to unpack .../6-libpython3.9-minimal_3.9.2-1_arm64.deb ... Unpacking libpython3.9-minimal:arm64 (3.9.2-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../7-libexpat1_2.2.10-2+deb11u5_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2+deb11u5) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../8-python3.9-minimal_3.9.2-1_arm64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:arm64 (3.9.2-1) ... Setting up libexpat1:arm64 (2.2.10-2+deb11u5) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19135 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_arm64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package tzdata. Preparing to unpack .../2-tzdata_2021a-1+deb11u10_all.deb ... Unpacking tzdata (2021a-1+deb11u10) ... Selecting previously unselected package libmpdec3:arm64. Preparing to unpack .../3-libmpdec3_2.5.1-1_arm64.deb ... Unpacking libmpdec3:arm64 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../5-libreadline8_8.1-1_arm64.deb ... Unpacking libreadline8:arm64 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:arm64. Preparing to unpack .../6-libpython3.9-stdlib_3.9.2-1_arm64.deb ... Unpacking libpython3.9-stdlib:arm64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../7-python3.9_3.9.2-1_arm64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../8-libpython3-stdlib_3.9.2-3_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21418 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_arm64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package ucf. Preparing to unpack .../002-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package tex-common. Preparing to unpack .../003-tex-common_6.16_all.deb ... Unpacking tex-common (6.16) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../004-libncurses6_6.2+20201114-2+deb11u2_arm64.deb ... Unpacking libncurses6:arm64 (6.2+20201114-2+deb11u2) ... Selecting previously unselected package libprocps8:arm64. Preparing to unpack .../005-libprocps8_2%3a3.3.17-5_arm64.deb ... Unpacking libprocps8:arm64 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../006-procps_2%3a3.3.17-5_arm64.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../008-libmagic1_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../011-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../012-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../013-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../014-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bullseye I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/suitesparse-5.8.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../suitesparse_5.8.1+dfsg-2_source.changes dpkg-buildpackage: info: source package suitesparse dpkg-buildpackage: info: source version 1:5.8.1+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sébastien Villemot dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' make purge make[2]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' ( cd SuiteSparse_config && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_config' ( cd xerbla ; make clean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_config/xerbla' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_config/xerbla' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot ( cd xerbla ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_config/xerbla' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_config/xerbla' rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_config' ( cd metis-5.1.0 && make distclean ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/metis-5.1.0' rm -rf build/Linux-aarch64 make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/metis-5.1.0' ( cd AMD && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f amd_demo my_amd_demo.out rm -f amd_l_demo my_amd_l_demo.out rm -f amd_demo2 my_amd_demo2.out rm -f amd_simple my_amd_simple.out rm -f amd_f77demo my_amd_f77demo.out rm -f amd_f77simple my_amd_f77simple.out rm -f amd_f77cross my_amd_f77cross.out rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Demo' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot ; rm -f *.mex* ) ( cd Doc ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Doc' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Doc' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD' ( cd GraphBLAS && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS' rm -rf build/* Demo/*.out Demo/complex_demo_out*.m Tcov/log.txt rm -rf Config/*.tmp Source/control.m4 rm -rf Doc/html/* Doc/*.tmp ( cd GraphBLAS/test/tcov ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/GraphBLAS/test/tcov' rm -f -rf tmp/* make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/GraphBLAS/test/tcov' ( cd GraphBLAS/@GrB/private ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/GraphBLAS/@GrB/private' rm -f -rf *.o *.mex* make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/GraphBLAS/@GrB/private' ( cd Test ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Test' rm -f -r *.o *.obj *.out *.aux *.log *.bbl *.blg *.toc rm -f *.mex* errlog*.txt spok/*.mex* log.txt fprint.txt make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Test' ( cd Tcov ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Tcov' rm -f *.o rm -f *.mex* tmp*/* errlog*.txt grbstat.mat fprint.txt rm -f libgraphblas_tcov.* make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Tcov' ( cd Doc ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Doc' rm -f -r *.out *.aux *.log *.bbl *.blg *.toc make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Doc' ( cd alternative ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/alternative' rm -f -f *.o *.out *_out.m *_out2.m rm -f -rf *.dSYM bfs_demo complex_demo import_demo kron_demo mis_demo openmp_demo pagerank_demo pthread_demo reduce_demo simple_demo tri_demo wildtype_demo libgraphblas.* make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/alternative' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS' ( cd Mongoose && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose' make -C build purge make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build' make[4]: *** No rule to make target 'purge'. Stop. make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build' make[3]: [Makefile:50: distclean] Error 2 (ignored) rm -rf build/* Lib/* MATLAB/*.mex* rm -rf SuiteSparse_config/*.o SuiteSparse_config/*.a make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose' ( cd CAMD && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f camd_demo my_camd_demo.out rm -f camd_l_demo my_camd_l_demo.out rm -f camd_demo2 my_camd_demo2.out rm -f camd_simple my_camd_simple.out rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD/Demo' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot ; rm -f *.mex* ) ( cd Doc ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD/Doc' rm -f -r camd_temp *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD/Doc' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CAMD' ( cd COLAMD && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/COLAMD' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/COLAMD/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/COLAMD/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/COLAMD/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f colamd_example colamd_l_example rm -f my_colamd_example.out my_colamd_l_example.out rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/COLAMD/Demo' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot ; rm -f *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/COLAMD' ( cd BTF && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/BTF' ( cd Lib ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/BTF/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/BTF/Lib' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot ; rm -f *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/BTF' ( cd KLU && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU' ( cd Demo ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f kludemo kluldemo klu_simple rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/Demo' ( cd Lib ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/Lib' ( cd Tcov ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/Tcov' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f klutest klultest *.out cov_*.c rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/Tcov' ( cd User ; make distclean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/User' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU/User' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rename.h *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/KLU' ( cd LDL && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f ldlmain ldllmain ldlsimple ldllsimple ldlamd ldllamd rm -f my_ldlmain.out my_ldlamd.out my_ldlsimple.out my_ldllamd.out rm -f my_ldllsimple.out my_ldllmain.out rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL/Demo' ( cd Doc ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL/Doc' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL/Doc' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/LDL' ( cd CCOLAMD && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CCOLAMD' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CCOLAMD/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CCOLAMD/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CCOLAMD/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f ccolamd_example ccolamd_l_example rm -f my_ccolamd_example.out my_ccolamd_l_example.out rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CCOLAMD/Demo' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot ; rm -f *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CCOLAMD' ( cd UMFPACK && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f umfpack_simple a.out rm -f umfpack_di_demo my_umfpack_di_demo.out rm -f umfpack_dl_demo my_umfpack_dl_demo.out rm -f umfpack_zi_demo my_umfpack_zi_demo.out rm -f umfpack_zl_demo my_umfpack_zl_demo.out rm -f umf4hb umf4zhb *.umf my_umf4hb.out rm -f umf4hb64 my_umf4hb64.out my_umf4zhb.out rm -f umf4 readhb readhb_nozeros readhb_size tmp/* rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Demo' ( cd Doc ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Doc' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f UMFPACK_UserGuide.tex rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Doc' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Tcov' rm -f -r /tmp/UMFPACK_TCOV_TMP rm -f -r cover.out covall_err.out make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/Tcov' ( cd MATLAB ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/MATLAB' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f luflop.mex* umfpack.mex* rename.h GKlib_util.c GKlib_graph.c rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK/MATLAB' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/UMFPACK' ( cd CHOLMOD && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Tcov' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f cm cl cmread clread *.c.gcov *.out /tmp/CHOLMOD_TCOV_TMP zdemo ldemo rm -f leak zz_*.c z_*.c *.a l_*.c zl_*.c cov.sort ldemo.c zdemo.c rm -f -r cm.profile cmread.profile zdemo.profile /tmp/CHOLMOD_TCOV_TMP rm -f -r cl.profile clread.profile ldemo.profile rm -f temp*.mtx timelog.m rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Tcov' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Lib' ( cd Valgrind ; make dopurge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Valgrind' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f cm cl cmread clread *.c.gcov *.out /tmp/CHOLMOD_TCOV_TMP zdemo ldemo rm -f leak zz_*.c z_*.c *.a l_*.c zl_*.c cov.sort ldemo.c zdemo.c rm -f -r cm.profile cmread.profile zdemo.profile /tmp/CHOLMOD_TCOV_TMP rm -f -r cl.profile clread.profile ldemo.profile rm -f temp*.mtx timelog.m rm -f -r *.so* *.a *.dll *.dylib *.dSYM rm -f amdtest.c aug.c camdtest.c cctest.c cm.c cm.h cmread.c \ ctest.c huge.c leak.c lpdemo.c memory.c null2.c null.c \ raw_factor.c solve.c test_ops.c unpack.c comments.txt \ links Matrix make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Valgrind' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f cholmod_demo cholmod_l_demo readhb readhb2 reade rm -f cholmod_simple rm -f timelog.m rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Demo' ( cd Doc ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Doc' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f _temp.awk _*.tex rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD/Doc' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rename.h *.mex* GKlib_util.c GKlib_graph.c ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CHOLMOD' ( cd CSparse && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse/Lib' rm -f *.o rm -f *.a *.obj *.dll *.dylib *.so *.so.* make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse/Demo' rm -f *.o rm -f -r cs_demo1 cs_demo2 cs_demo3 *.a *.dSYM *.obj *.dll make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse/Demo' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse/Tcov' rm -f *.o *.bbg *.da *.gcov *.gcda *.gcno rm -f cs_demo1 cs_demo2 readhb *.out *.a cs_demo3 cstcov_test cov.sort rm -f -r cs_*.c *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse/Tcov' ( cd MATLAB/CSparse ; rm -f *.o *.mex* ) ( cd MATLAB/Test ; rm -f *.o *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CSparse' ( cd CXSparse && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f cs_demo1 cs_demo2 cs_demo3 *.a rm -f cs_di_demo1 cs_di_demo2 cs_di_demo3 rm -f cs_dl_demo1 cs_dl_demo2 cs_dl_demo3 rm -f cs_ci_demo1 cs_ci_demo2 cs_ci_demo3 rm -f cs_cl_demo1 cs_cl_demo2 cs_cl_demo3 rm -f cs_idemo cs_ldemo rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse/Demo' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse/Tcov' rm -f *.o *.bbg *.da *.gcov *.gcda *.gcno rm -f readhb *.out *.a cov.sort rm -f cs_demo1_di cs_demo2_di cs_demo3_di cstcov_test_di rm -f cs_demo1_dl cs_demo2_dl cs_demo3_dl cstcov_test_dl rm -f cs_demo1_ci cs_demo2_ci cs_demo3_ci cstcov_test_ci rm -f cs_demo1_cl cs_demo2_cl cs_demo3_cl cstcov_test_cl rm -f cs_idemo cs_ldemo rm -f cs_*.c rm -f cs*_di.c cs*_dl.c cs*_ci.c cs*_cl.c rm -f -r *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse/Tcov' ( cd MATLAB/CSparse ; rm -f *.o cs_cl_*.c *.mex* ) ( cd MATLAB/Test ; rm -f *.o cs_cl_*.c *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/CXSparse' ( cd RBio && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio/Tcov' rm -f temp*.rb rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f RBio.c SuiteSparse_config.c RBio.h SuiteSparse_config.h RBdemo gcov.out RBtest RBdemo.c rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio/Tcov' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot temp.rb rm -f -r *.so* *.a *.dll *.dylib *.dSYM RBdemo make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio/Demo' ( cd RBio ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot private/temp.rb *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/RBio' ( cd MATLAB_Tools/SuiteSparseCollection && rm -f *.mex* ) ( cd MATLAB_Tools/SSMULT && rm -f *.mex* ) ( cd SuiteSparse_GPURuntime && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_GPURuntime' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_GPURuntime/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_GPURuntime/Lib' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SuiteSparse_GPURuntime' ( cd GPUQREngine && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GPUQREngine' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GPUQREngine/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GPUQREngine/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GPUQREngine/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r gpuqrengine_demo troll.m *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GPUQREngine/Demo' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GPUQREngine' ( cd SPQR && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Demo' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f qrdemo qrdemo_gpu qrdemoc qrsimple qrsimplec X.mtx rm -f R.mtx C.mtx E.txt gpu_results.txt qrdemo_gpu2 qrdemo_gpu3 rm -f *.dot pfile tfile rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Demo' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Tcov' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f qrtest qrtest_out.txt pfile tfile cov.out qrtest_out1.txt rm -f gpuqrengine_demo troll.m qrdemo_gpu gpu_results.txt X.mtx rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Tcov' ( cd Doc ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Doc' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot *.out rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR/Doc' ( cd MATLAB ; rm -f *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rename.h *.mex* ) make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SPQR' ( cd SLIP_LU && make purge ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU' ( cd Lib ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Lib' rm -f -r *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno *.aux *.bbl *.blg *.log *.toc *.dvi *.lof *.lot rm -f -r *.so* *.a *.dll *.dylib *.dSYM make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Lib' ( cd Demo ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Demo' rm -f *.o rm -f -r example example2 example3 example4 example5 SLIPLU *.a *.dSYM *.obj *.dll make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Demo' ( cd Tcov ; make purge ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Tcov' rm -f *.o *.bbg *.da *.gcov *.gcda *gcno rm -f tcov_test SLIPLU *.out *.a cov.sort out rm -f -r SLIP_*.c slip_*.c *.dSYM SLIPLU.c demos.c make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Tcov' ( cd MATLAB/Source ; rm -f *.o *.mex* ) ( cd MATLAB ; rm -f *.o *.mex* ) ( cd Doc ; make clean ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Doc' rm -f -r *.out *.aux *.log *.bbl *.blg *.toc *.cpt make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU/Doc' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/SLIP_LU' rm -f MATLAB_Tools/*/*.mex* MATLAB_Tools/spok/private/*.mex* rm -f -r include/* bin/* lib/* share/* make[2]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' rm -rf static_lib rm -f AMD/Doc/AMD_UserGuide.pdf CAMD/Doc/CAMD_UserGuide.pdf CHOLMOD/Doc/CHOLMOD_UserGuide.pdf GraphBLAS/Doc/GraphBLAS_UserGuide.pdf KLU/Doc/KLU_UserGuide.pdf Mongoose/Doc/Mongoose_UserGuide.pdf UMFPACK/Doc/UMFPACK_QuickStart.pdf UMFPACK/Doc/UMFPACK_UserGuide.pdf LDL/Doc/ldl_userguide.pdf SPQR/Doc/spqr_user_guide.pdf SLIP_LU/Doc/SLIP_LU_UserGuide.pdf make[1]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' # Docs must be rebuilt first, because the build system expect them for some libs rm -f AMD/Doc/AMD_UserGuide.pdf CAMD/Doc/CAMD_UserGuide.pdf CHOLMOD/Doc/CHOLMOD_UserGuide.pdf GraphBLAS/Doc/GraphBLAS_UserGuide.pdf KLU/Doc/KLU_UserGuide.pdf Mongoose/Doc/Mongoose_UserGuide.pdf UMFPACK/Doc/UMFPACK_QuickStart.pdf UMFPACK/Doc/UMFPACK_UserGuide.pdf LDL/Doc/ldl_userguide.pdf SPQR/Doc/spqr_user_guide.pdf SLIP_LU/Doc/SLIP_LU_UserGuide.pdf make docs make[2]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' ( cd GraphBLAS && make docs ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS' ( cd Doc ; make ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Doc' pdflatex GraphBLAS_UserGuide.tex This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./GraphBLAS_UserGuide.tex LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty) (/usr/share/texlive/texmf-dist/tex/latex/mdframed/mdframed.sty (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse-generic.tex)) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/zref/zref-abspage.sty (/usr/share/texlive/texmf-dist/tex/latex/zref/zref-base.sty)) (/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/mdframed/md-frame-0.mdf)) (./GraphBLAS_version.tex) No file GraphBLAS_UserGuide.aux. 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[12] [13] Overfull \hbox (8.66713pt too wide) in paragraph at lines 589--594 []\OT1/cmr/m/n/12 The Ac-cu-mu-la-tor Phase is fol-lowed by the Mask/Replace Ph ase, $[]$ LaTeX Warning: Reference `fig_accummask' on page 14 undefined on input line 610 . LaTeX Warning: Reference `typecasting' on page 14 undefined on input line 617. Overfull \hbox (8.47243pt too wide) in paragraph at lines 665--665 [] \OT1/cmtt/m/n/10 p = C.pattern & T.pattern ; Z.matrix (p) = accum (C.mat rix (p), T.matrix (p));[] LaTeX Warning: Reference `fig_accummask' on page 14 undefined on input line 678 . [14] [15] LaTeX Warning: Reference `fig_accummask' on page 16 undefined on input line 682 . LaTeX Warning: Reference `fig_accummask' on page 16 undefined on input line 700 . Package mdframed Warning: You got a bad break (mdframed) because the last box will be empty (mdframed) you have to change it manually (mdframed) by changing the text, the space (mdframed) or something else on input line 725. [16] LaTeX Warning: Reference `error' on page 17 undefined on input line 748. [17] Overfull \hbox (13.20271pt too wide) in paragraph at lines 771--774 \OT1/cmr/m/n/12 ANSI C. Yet C leaves some type-cast-ing un-de-fined. Suite-Spar se:GraphBLAS [18] [19] Overfull \hbox (3.8319pt too wide) in paragraph at lines 852--852 []\OT1/cmr/bx/n/17.28 Interfaces to MAT-LAB, Python, Ju-lia, Java LaTeX Warning: Reference `matlab' on page 20 undefined on input line 856. LaTeX Warning: Reference `python' on page 20 undefined on input line 862. LaTeX Warning: Reference `julia' on page 20 undefined on input line 862. [20] Overfull \hbox (33.5095pt too wide) in paragraph at lines 937--940 \OT1/cmr/m/n/12 See Michel Pel-letier's Python in-ter-face at [][]https://githu b.com/michelp/pygraphblas[][]. [21] Overfull \hbox (19.49643pt too wide) in paragraph at lines 1005--1005 [] \OT1/cmtt/m/n/10 ... use features from version 1.4.0 of a specific GraphB LAS implementation[] Overfull \hbox (22.8047pt too wide) in paragraph at lines 1013--1031 [][] [22] LaTeX Warning: Reference `init' on page 23 undefined on input line 1080. LaTeX Warning: Reference `getVersion' on page 23 undefined on input line 1081. LaTeX Warning: Reference `xinit' on page 23 undefined on input line 1082. LaTeX Warning: Reference `info' on page 23 undefined on input line 1083. LaTeX Warning: Reference `error' on page 23 undefined on input line 1084. LaTeX Warning: Reference `finalize' on page 23 undefined on input line 1085. [23] Overfull \hbox (0.80347pt too wide) in paragraph at lines 1139--1147 \OT1/cmr/m/n/12 namely: [][]\OT1/cmtt/m/n/12 GrB_*_nvals[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GrB_*_extractElement[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_*_extractTuples[]\OT1/cmr/m/n/12 , and [24] LaTeX Warning: Reference `sec:install' on page 25 undefined on input line 1149. LaTeX Warning: Reference `options' on page 25 undefined on input line 1171. [25] (./GraphBLAS_API_version.tex) LaTeX Warning: Reference `import_export' on page 26 undefined on input line 124 1. [26] Overfull \hbox (9.03737pt too wide) in paragraph at lines 1259--1264 \OT1/cmr/m/n/12 LAB) and then linked into a MAT-LAB [][]\OT1/cmtt/m/n/12 mexFun ction[]\OT1/cmr/m/n/12 . How-ever, a [][]\OT1/cmtt/m/n/12 mexFunction [27] LaTeX Warning: Citation `spec' on page 28 undefined on input line 1351. [28] [29] [30] Overfull \hbox (7.08417pt too wide) in paragraph at lines 1439--1446 \OT1/cmr/m/n/12 Sparse:GraphBLAS adds two ad-di-tional ob-jects: a sparse scala r ([][]\OT1/cmtt/m/n/12 GxB_Scalar[]\OT1/cmr/m/n/12 ), Overfull \hbox (3.67369pt too wide) in paragraph at lines 1453--1473 [] [31] Overfull \hbox (25.98555pt too wide) in paragraph at lines 1503--1534 [] LaTeX Warning: Reference `type_new' on page 32 undefined on input line 1547. [32] [33] [34] LaTeX Warning: Reference `user' on page 35 undefined on input line 1651. [35] Overfull \hbox (3.28505pt too wide) in paragraph at lines 1689--1692 [][]\OT1/cmtt/m/n/12 GxB_Type_size (&s, GrB_INT32) []\OT1/cmr/m/n/12 sets [][]\ OT1/cmtt/m/n/12 s []\OT1/cmr/m/n/12 to 4, the same as [][]\OT1/cmtt/m/n/12 size of(int32_t)[]\OT1/cmr/m/n/12 . LaTeX Warning: Reference `free' on page 36 undefined on input line 1739. Overfull \hbox (3.59038pt too wide) in paragraph at lines 1738--1744 []\OT1/cmr/m/n/12 The func-tion sig-na-ture of [][]\OT1/cmtt/m/n/12 GrB_Type_fr ee []\OT1/cmr/m/n/12 uses the generic name [][]\OT1/cmtt/m/n/12 GrB_free[]\OT1/ cmr/m/n/12 , [36] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1747. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1747. Overfull \hbox (20.08385pt too wide) in paragraph at lines 1807--1860 [][] [37] [38] Overfull \hbox (1.92638pt too wide) in paragraph at lines 1930--1930 []\OT1/cmtt/m/n/10 GrB_Info GrB_UnaryOp_new // create a new user-def ined unary operator[] [39] Overfull \hbox (62.36047pt too wide) in paragraph at lines 1977--1983 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GrB_UnaryOp_wait(&unaryop) Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1985. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1985. [40] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2008. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2008. [41] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2062. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2062. Overfull \hbox (12.26166pt too wide) in paragraph at lines 2118--2142 [][] [42] [43] Overfull \hbox (9.19183pt too wide) in paragraph at lines 2212--2230 [][] [44] Overfull \hbox (10.58614pt too wide) in paragraph at lines 2271--2280 \OT1/cmr/m/n/12 XOR op-er-a-tors. With-out the [][]\OT1/cmtt/m/n/12 _$\OML/cmm/ m/it/12 T$ []\OT1/cmr/m/n/12 suf-fix, the three op-er-a-tors [][]\OT1/cmtt/m/n/ 12 GrB_LOR[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_LAND[]\OT1/cmr/m/n/12 , LaTeX Warning: Reference `type' on page 45 undefined on input line 2294. [45] Overfull \hbox (74.71048pt too wide) in paragraph at lines 2375--2381 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GrB_BinaryOp_wait(&binaryop) Overfull \hbox (23.8884pt too wide) in paragraph at lines 2375--2381 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GrB_BinaryOp_wait(&binaryop)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 binaryop Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2384. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2384. [46] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2408. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2408. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2432. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2432. [47] [48] [49] Overfull \hbox (28.54279pt too wide) in paragraph at lines 2534--2534 []\OT1/cmr/bx/n/14.4 SuiteSparse:GraphBLAS se-lect op-er-a-tors: \OT1/cmss/m/n/ 14.4 GxB[]SelectOp LaTeX Warning: Reference `select' on page 50 undefined on input line 2545. Overfull \hbox (8.99652pt too wide) in paragraph at lines 2560--2560 [] \OT1/cmtt/m/n/10 const void *x, // value of A(i,j), or NULL if f is type-generic[] Overfull \hbox (13.94386pt too wide) in paragraph at lines 2568--2596 [][] [50] Overfull \hbox (1.92638pt too wide) in paragraph at lines 2633--2633 [] \OT1/cmtt/m/n/10 GrB_Type ttype // type of input thunk, or N ULL if type-generic[] LaTeX Warning: Reference `selectop' on page 51 undefined on input line 2641. [51] Overfull \hbox (74.71048pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GxB_SelectOp_wait(&selectop) Overfull \hbox (23.8884pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GxB_SelectOp_wait(&selectop)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 selectop Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2680. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2680. [52] [53] LaTeX Warning: Reference `monoid_terminal_new' on page 54 undefined on input li ne 2817. [54] Overfull \hbox (23.23036pt too wide) in paragraph at lines 2827--2833 [][]\OT1/cmtt/m/n/12 GrB_LAND_MONOID_BOOL[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/ 12 GrB_LXOR_MONOID_BOOL[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GrB_LXNOR_M ONOID_BOOL[]\OT1/cmr/m/n/12 . [55] LaTeX Warning: Reference `type' on page 56 undefined on input line 2893. Overfull \hbox (0.98737pt too wide) in paragraph at lines 2918--2923 \OT1/cmr/m/n/12 ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1/cm tt/m/n/12 GrB_Monoid_wait(&monoid) [56] Overfull \hbox (7.17633pt too wide) in paragraph at lines 2940--2940 []\OT1/cmtt/m/n/10 GrB_Info GxB_Monoid_terminal_new // create a monoid that has a terminal value[] LaTeX Warning: Reference `monoid_new' on page 57 undefined on input line 2946. [57] [58] [59] Overfull \hbox (11.07724pt too wide) in paragraph at lines 3166--3172 \OT1/cmr/m/n/12 types: [][]\OT1/cmtt/m/n/12 PLUS_TIMES[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 PLUS_MIN[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_PLUS[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_TIMES[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m /n/12 MIN_FIRST[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_SECOND[]\OT1/cmr/m/ n/12 , [60] Overfull \hbox (4.26732pt too wide) in paragraph at lines 3188--3194 []\OT1/cmr/m/n/12 20 mul-ti-ply op-er-a-tors ([][]\OT1/cmtt/m/n/12 FIRST[]\OT1/ cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 SECOND[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 PAIR[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN[]\OT1/cmr/m/n/12 , [][]\OT1/ cmtt/m/n/12 MAX[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 PLUS[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MINUS[]\OT1/cmr/m/n/12 , [61] Overfull \hbox (38.7428pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Semiring_wait(&semiring) Overfull \hbox (23.8884pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GrB_Semiring_wait(&semiring)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 semiring [62] Overfull \hbox (7.17633pt too wide) in paragraph at lines 3307--3307 [] \OT1/cmtt/m/n/10 GrB_BinaryOp *multiply, // returns multiply oper ator of the semiring[] [63] Overfull \hbox (22.45738pt too wide) in paragraph at lines 3360--3375 [][] Underfull \hbox (badness 10000) in paragraph at lines 3360--3375 [64] [65] LaTeX Warning: Reference `matrix_setElement' on page 66 undefined on input line 3537. [66] LaTeX Warning: Reference `matrix_extractElement' on page 67 undefined on input line 3557. Overfull \hbox (1.83382pt too wide) in paragraph at lines 3555--3561 \OT1/cmr/m/n/12 cussed in Sec-tion [], which dis-cusses [][]\OT1/cmtt/m/n/12 Gr B_Matrix_extractElement[]\OT1/cmr/m/n/12 . \OT1/cmr/bx/n/12 NOTE: [67] LaTeX Warning: Reference `hypersparse' on page 68 undefined on input line 3615. LaTeX Warning: Reference `import_export' on page 68 undefined on input line 364 1. LaTeX Warning: Reference `import_export' on page 68 undefined on input line 364 3. [68] Overfull \hbox (12.47293pt too wide) in paragraph at lines 3667--3671 \OT1/cmr/m/n/12 of the given type. This is anal-o-gous to MAT-LAB state-ment [] []\OT1/cmtt/m/n/12 v = sparse (n,1)[]\OT1/cmr/m/n/12 , [69] Overfull \hbox (9.02386pt too wide) in paragraph at lines 3748--3754 \OT1/cmr/m/n/12 were cre-ated fresh with [][]\OT1/cmtt/m/n/12 GrB_Vector_new[]\ OT1/cmr/m/n/12 . Anal-o-gous with [][]\OT1/cmtt/m/n/12 v (:) = sparse(0) [70] Overfull \hbox (33.82916pt too wide) in paragraph at lines 3813--3815 [][][]\OT1/cmtt/m/n/12 GxB_Vector_type []\OT1/cmr/m/n/12 re-turns the type of a vec-tor. Anal-o-gous to [][]\OT1/cmtt/m/n/12 type = class (v) LaTeX Warning: Reference `matrix_build' on page 71 undefined on input line 3845 . [71] LaTeX Warning: Reference `matrix_setElement' on page 72 undefined on input line 3875. Overfull \hbox (5.42024pt too wide) in paragraph at lines 3871--3876 \OT1/cmr/m/n/12 op-er-a-tion is ex-actly like set-ting a sin-gle en-try in an [ ][]\OT1/cmtt/m/n/12 n[]\OT1/cmr/m/n/12 -by-1 ma-trix, [][]\OT1/cmtt/m/n/12 A(i, 0) = x[]\OT1/cmr/m/n/12 , LaTeX Warning: Reference `matrix_extractElement' on page 72 undefined on input line 3896. Overfull \hbox (22.40071pt too wide) in paragraph at lines 3893--3902 [][][]\OT1/cmtt/m/n/12 GrB_Vector_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a vec-tor, [][]\OT1/cmtt/m/n/12 x = v(i)[]\OT1/cmr/m/n/12 . [72] LaTeX Warning: Reference `matrix_extractTuples' on page 73 undefined on input l ine 3942. [73] [74] LaTeX Warning: Reference `import_export' on page 75 undefined on input line 402 1. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 402 3. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 402 5. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 402 7. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 402 9. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 403 1. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 403 3. LaTeX Warning: Reference `import_export' on page 75 undefined on input line 403 5. Overfull \hbox (17.62402pt too wide) in paragraph at lines 4002--4040 [][] [75] [76] Overfull \hbox (21.21309pt too wide) in paragraph at lines 4164--4166 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows []\OT1/cmr/m/n/12 re-turns the num-ber of rows of a ma-trix ([][]\OT1/cmtt/m/n/12 nrows=size(A,1) Overfull \hbox (39.81706pt too wide) in paragraph at lines 4184--4186 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_ncols []\OT1/cmr/m/n/12 re-turns the num-ber of columns of a ma-trix ([][]\OT1/cmtt/m/n/12 ncols=size(A,2) [77] [78] LaTeX Warning: Reference `typecasting' on page 79 undefined on input line 4266. [79] [80] LaTeX Warning: Reference `overview' on page 81 undefined on input line 4374. LaTeX Warning: Reference `compare_assign' on page 81 undefined on input line 43 92. Overfull \hbox (11.6521pt too wide) in paragraph at lines 4389--4402 [][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G xB_Matrix_type[]\OT1/cmr/m/n/12 , and of course [][]\OT1/cmtt/m/n/12 GrB_Matrix _setElement [81] LaTeX Warning: Reference `random' on page 82 undefined on input line 4403. Overfull \hbox (21.81322pt too wide) in paragraph at lines 4424--4426 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a ma-trix [][]\OT1/cmtt/m/n/12 x=A(i,j)[]\OT1/cmr/m/n/12 . [82] Overfull \hbox (39.24196pt too wide) in paragraph at lines 4508--4517 []\OT1/cmr/m/n/12 The num-ber of tu-ples in the ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/n/12 is given by [][]\OT1/cmtt/m/n/12 GrB_Matrix_nvals(&anvals,A)[ ]\OT1/cmr/m/n/12 . [83] [84] Overfull \hbox (6.42572pt too wide) in paragraph at lines 4571--4575 \OT1/cmr/m/n/12 The im-port/export func-tions al-low the user ap-pli-ca-tion to cre-ate a [][]\OT1/cmtt/m/n/12 GrB_Matrix Overfull \hbox (3.48825pt too wide) in paragraph at lines 4585--4589 []\OT1/cmr/m/n/12 incorporate them into its in-ter-nal data struc-ture for the new [][]\OT1/cmtt/m/n/12 GrB_Matrix [85] LaTeX Warning: Reference `vector_import' on page 86 undefined on input line 464 1. LaTeX Warning: Reference `vector_export' on page 86 undefined on input line 464 3. LaTeX Warning: Reference `matrix_import_csr' on page 86 undefined on input line 4646. LaTeX Warning: Reference `matrix_import_csc' on page 86 undefined on input line 4648. LaTeX Warning: Reference `matrix_import_hypercsr' on page 86 undefined on input line 4650. LaTeX Warning: Reference `matrix_import_hypercsc' on page 86 undefined on input line 4652. LaTeX Warning: Reference `matrix_export_csr' on page 86 undefined on input line 4654. LaTeX Warning: Reference `matrix_export_csc' on page 86 undefined on input line 4656. LaTeX Warning: Reference `matrix_export_hypercsr' on page 86 undefined on input line 4658. LaTeX Warning: Reference `matrix_export_hypercsc' on page 86 undefined on input line 4660. [86] Overfull \hbox (2.4533pt too wide) in paragraph at lines 4704--4707 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GxB_Vector_import []\OT1/cmr/m/n/12 func-tion is a fast way to con-struct a [][]\OT1/cmtt/m/n/12 GrB_Vector[]\OT1/c mr/m/n/12 , Overfull \hbox (8.99652pt too wide) in paragraph at lines 4720--4720 [] \OT1/cmtt/m/n/10 GxB_Matrix_import_CSC (&A, type, n, 1, nvals, -1, &Ap, & vi, &vx, desc) ;[] LaTeX Warning: Reference `matrix_import_csc' on page 87 undefined on input line 4728. [87] LaTeX Warning: Reference `matrix_export_csc' on page 88 undefined on input line 4792. [88] LaTeX Warning: Reference `hypersparse' on page 89 undefined on input line 4840. [89] Overfull \hbox (19.49643pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 2, 5, 7, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Aj [ ] = { 0, 2, 0, 1, 3, 1, 2, 0, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.2, 3.1, 2.9, 0.9, 1.7, 3.0, 3. 5, 0.4, 1.0 } ;[] [90] LaTeX Warning: Reference `matrix_export_csr' on page 91 undefined on input line 4956. [91] LaTeX Warning: Reference `eqn:Aexample' on page 92 undefined on input line 5011 . Overfull \hbox (19.49643pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 3, 6, 8, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ai [ ] = { 0, 1, 3, 1, 2, 3, 0, 2, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.1, 3.5, 2.9, 1.7, 0.4, 3.2, 3. 0, 0.9, 1.0 } ;[] Overfull \hbox (1.55626pt too wide) in paragraph at lines 5033--5036 []\OT1/cmr/m/n/12 That is, the row in-dices of col-umn 1 (the sec-ond col-umn) are in [][]\OT1/cmtt/m/n/12 Ai [3..5][]\OT1/cmr/m/n/12 , [92] [93] LaTeX Warning: Reference `eqn:Ahyper' on page 94 undefined on input line 5100. LaTeX Warning: Reference `eqn:Aexample' on page 94 undefined on input line 5101 . [94] [95] Overfull \hbox (1.92638pt too wide) in paragraph at lines 5212--5212 [] \OT1/cmtt/m/n/10 int64_t nonempty, // number of columns in Ah with at least one entry,[] [96] LaTeX Warning: Reference `matrix_import_csr' on page 97 undefined on input line 5289. [97] LaTeX Warning: Reference `matrix_import_csc' on page 98 undefined on input line 5346. [98] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5385--5385 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSR // export and free a hy persparse CSR matrix[] LaTeX Warning: Reference `matrix_import_hypercsr' on page 99 undefined on input line 5406. [99] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5446--5446 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSC // export and free a hy persparse CSC matrix[] LaTeX Warning: Reference `matrix_import_hypercsc' on page 100 undefined on inpu t line 5466. [100] [101] [102] Overfull \hbox (5.91904pt too wide) in paragraph at lines 5616--5622 []\OT1/cmr/m/n/12 Vectors and scalars are never trans-posed via the de-scrip-to r. If a method's Overfull \hbox (4.20209pt too wide) in paragraph at lines 5616--5622 [][]\OT1/cmtt/m/n/12 desc [GrB_INP0] []\OT1/cmr/m/n/12 mod-i-fies the ma-trix p a-ram-e-ter and [][]\OT1/cmtt/m/n/12 desc [GrB_INP1] Overfull \hbox (22.34908pt too wide) in paragraph at lines 5636--5640 [][][]\OT1/cmtt/m/n/12 GxB_AxB_SAXPY[]\OT1/cmr/m/n/12 : se-lect any saxpy-based method: [][]\OT1/cmtt/m/n/12 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , [103] LaTeX Warning: Citation `Gustavson78' on page 104 undefined on input line 5642. LaTeX Warning: Citation `10.1145/3229710.3229720' on page 104 undefined on inpu t line 5658. [104] Overfull \hbox (7.86778pt too wide) in paragraph at lines 5719--5724 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Descriptor_wait(&d) Overfull \hbox (17.0722pt too wide) in paragraph at lines 5742--5751 [][][]\OT1/cmtt/m/n/12 GrB_Descriptor_set []\OT1/cmr/m/n/12 sets a de-scrip-tor field ([][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G rB_MASK[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , Overfull \hbox (6.71817pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_Ax B_METHOD[]\OT1/cmr/m/n/12 ) to a par-tic-u-lar value ([][]\OT1/cmtt/m/n/12 GxB_ DEFAULT[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_COMP[]\OT1/cmr/m/n/12 , Overfull \hbox (75.18883pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_ COMP+GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_TRAN[]\OT1/cmr/m /n/12 , [][]\OT1/cmtt/m/n/12 GrB_REPLACE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , Underfull \hbox (badness 2020) in paragraph at lines 5765--5769 [][][]\OT1/cmtt/m/n/10.95 GrB_REPLACE[]\OT1/cmr/m/n/10.95 : Af-ter com-put-ing Underfull \hbox (badness 2922) in paragraph at lines 5765--5769 []$\OT1/cmr/m/n/10.95 , the out-put \OT1/cmr/bx/n/10.95 C \OT1/cmr/m/n/10.95 is Underfull \hbox (badness 2035) in paragraph at lines 5765--5769 \OT1/cmr/m/n/10.95 cleared of all en-tries. Then Underfull \hbox (badness 4981) in paragraph at lines 5777--5781 \OT1/cmr/m/n/10.95 op-er-a-tion, while [][]\OT1/cmtt/m/n/10.95 Mask(i,j)=1 Underfull \hbox (badness 1540) in paragraph at lines 5782--5787 [][][]\OT1/cmtt/m/n/10.95 GrB_STRUCTURE[]\OT1/cmr/m/n/10.95 : The val-ues of Underfull \hbox (badness 5667) in paragraph at lines 5782--5787 \OT1/cmr/m/n/10.95 the Mask are ig-nored. If Underfull \hbox (badness 1178) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 Mask(i,j) []\OT1/cmr/m/n/10.95 is an en-try in the Underfull \hbox (badness 4872) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 GrB_COMP []\OT1/cmr/m/n/10.95 and [][]\OT1/cmtt/m/n/10. 95 GrB_STRUCTURE Underfull \hbox (badness 3838) in paragraph at lines 5793--5796 [][][]\OT1/cmtt/m/n/10.95 GrB_TRAN[]\OT1/cmr/m/n/10.95 : The first in-put is Underfull \hbox (badness 6252) in paragraph at lines 5811--5813 \OT1/cmr/m/n/10.95 method is used to com-pute Overfull \hbox (58.92297pt too wide) in paragraph at lines 5753--5817 [] Underfull \hbox (badness 10000) in paragraph at lines 5753--5817 [105] [106] LaTeX Warning: Reference `options' on page 107 undefined on input line 5838. LaTeX Warning: Reference `options' on page 107 undefined on input line 5862. [107] Overfull \hbox (28.49763pt too wide) in paragraph at lines 5913--5961 [] [108] Overfull \hbox (14.24648pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 H = G ; // valid; creates a 2nd handle o f the same object[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 GrB_free (&G) ; // valid; G is freed and set to NULL; H now undefined[] [109] LaTeX Warning: Reference `tab:maskaccum' on page 110 undefined on input line 60 16. LaTeX Warning: Reference `tab:maskaccum' on page 110 undefined on input line 60 33. [110] [111] Overfull \hbox (0.7007pt too wide) in paragraph at lines 6117--6125 []\OT1/cmr/m/n/12 SuiteSparse:GraphBLAS in-cludes two type-generic meth-ods, [] []\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/n/12 and LaTeX Warning: Citation `BulucGilbert08' on page 112 undefined on input line 61 31. LaTeX Warning: Citation `BulucGilbert12' on page 112 undefined on input line 61 31. Overfull \hbox (12.98712pt too wide) in paragraph at lines 6136--6141 [][][]\OT1/cmtt/m/n/12 GxB_set (GrB_Matrix A, field, value) []\OT1/cmr/m/n/12 p ro-vides hints to Suite-Sparse: Overfull \hbox (1.08037pt too wide) in paragraph at lines 6156--6158 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Matrix A, field, &value) []\OT1/cmr/m/n/12 re-trieves the cur-rent value Overfull \hbox (4.81274pt too wide) in paragraph at lines 6159--6161 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Descriptor desc, field, &value) []\OT1/cmr/ m/n/12 re-trieves the value [112] Overfull \hbox (4.50215pt too wide) in paragraph at lines 6218--6221 \OT1/cmr/m/n/12 The de-fault for [][]\OT1/cmtt/m/n/12 nthreads_max []\OT1/cmr/m /n/12 is the re-turn value from [][]\OT1/cmtt/m/n/12 omp_get_max_threads[]\OT1/ cmr/m/n/12 , [113] [114] Overfull \hbox (11.60793pt too wide) in paragraph at lines 6269--6276 \OT1/cmr/m/n/12 Graph-BLAS API Spec-i-fi-ca-tion, where the breadth-first searc h [][]\OT1/cmtt/m/n/12 BFS []\OT1/cmr/m/n/12 uses [][]\OT1/cmtt/m/n/12 GrB_vxm Overfull \hbox (14.33583pt too wide) in paragraph at lines 6294--6299 \OT1/cmr/m/n/12 can be com-piled with [][]\OT1/cmtt/m/n/12 -DBYCOL[]\OT1/cmr/m/ n/12 , which changes the de-fault for-mat to [][]\OT1/cmtt/m/n/12 GxB_BY_COL[]\ OT1/cmr/m/n/12 , LaTeX Warning: Citation `BulucGilbert08' on page 115 undefined on input line 63 13. LaTeX Warning: Citation `BulucGilbert12' on page 115 undefined on input line 63 13. [115] Overfull \hbox (3.22508pt too wide) in paragraph at lines 6347--6351 []\OT1/cmr/m/n/12 If a ma-trix is cur-rently hy-per-sparse, it can be con-verte d to non-hypersparse [116] Overfull \hbox (18.1564pt too wide) in paragraph at lines 6376--6381 [][]\OT1/cmtt/m/n/12 GxB_BY_COL []\OT1/cmr/m/n/12 for-mat, as de-ter-mined by t he last call to [][]\OT1/cmtt/m/n/12 GxB_set(GxB_FORMAT,...) Overfull \hbox (3.83885pt too wide) in paragraph at lines 6386--6391 \OT1/cmr/m/n/12 type of the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 pa-ram -e-ter for the sec-ond ar-gu-ment of [][]\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/ n/12 and [][]\OT1/cmtt/m/n/12 GxB_get[]\OT1/cmr/m/n/12 , Overfull \hbox (19.49643pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_HYPER = 0, // defines switch to hypersparse for mat (double value)[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_FORMAT = 1, // defines CSR/CSC format: GxB_BY_RO W or GxB_BY_COL[] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_MODE = 2, // mode passed to GrB_init (blocking or non-blocking)[] [117] [118] [119] LaTeX Warning: Reference `sec:threads' on page 120 undefined on input line 6533 . Overfull \hbox (11.559pt too wide) in paragraph at lines 6531--6535 \OT1/cmr/m/n/12 This is de-ter-mined dur-ing in-stal-la-tion (see Sec-tion []). Since [][]\OT1/cmtt/m/n/12 GxB_THREAD_NONE Overfull \hbox (14.24648pt too wide) in paragraph at lines 6567--6567 [] \OT1/cmtt/m/n/10 printf ("GraphBLAS is multi-threaded, internally, us ing OpenMP.\n") ;[] [120] [121] LaTeX Warning: Reference `descriptor_set' on page 122 undefined on input line 6 661. LaTeX Warning: Reference `desc_set' on page 122 undefined on input line 6661. Overfull \hbox (44.81151pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 con-sis-tent with the other us-ages of this generic func-tion. Un-like [][]\OT1/cmtt/m/n/12 GrB_Descriptor_set[]\OT1/cmr/m/n/12 , Overfull \hbox (15.02003pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 may also be [] []\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_ CHUNK[]\OT1/cmr/m/n/12 . Re-fer to Sec-tions [] and [] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (s == GxB_BY_COL) printf ("all new matrices are store d by column\n") :[] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (mode == GrB_BLOCKING) printf ("GrB_init(GrB_BLOCKING ) was called.\n") :[] [122] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is currently %shypersparse\n", is_hype r ? "not " : " ") ;[] Overfull \hbox (19.49643pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is stored by %s\n", (s == GxB_BY_COL) ? "col" : "row") ;[] LaTeX Warning: Reference `desc_get' on page 123 undefined on input line 6766. Overfull \hbox (1.31094pt too wide) in paragraph at lines 6762--6767 [][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_MASK[ ]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , [][]\OT1/cm tt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_AxB_METHOD[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , [123] [124] [125] Overfull \hbox (2.24268pt too wide) in paragraph at lines 6872--6879 \OT1/cmr/m/n/12 MATLAB uses a colon no-ta-tion to in-dex into ma-tri-ces, such as [][]\OT1/cmtt/m/n/12 C=A(2:4,3:8)[]\OT1/cmr/m/n/12 , [126] LaTeX Warning: Reference `operations' on page 127 undefined on input line 6933. Overfull \hbox (5.33707pt too wide) in paragraph at lines 6932--6935 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GrB_extract[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 GrB_assign[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GxB_suba ssign []\OT1/cmr/m/n/12 op-er-a-tions (de-scribed LaTeX Warning: Reference `duplicates' on page 127 undefined on input line 6958. Overfull \hbox (6.98373pt too wide) in paragraph at lines 6967--6974 \OT1/cmr/m/n/12 the spe-cial value [][]\OT1/cmtt/m/n/12 ni = GxB_RANGE[]\OT1/cm r/m/n/12 . The be-gin-ning in-dex is [][]\OT1/cmtt/m/n/12 I[GxB_BEGIN] [127] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7011--7011 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i <= I [GxB_END] ; i + = I [GxB_INC])[] [128] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7057--7057 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i >= I [GxB_END] ; i - = I [GxB_INC])[] [129] [130] Overfull \hbox (24.74638pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.matrix (:,:) = identity ; % the identity of th e semiring's monoid[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.class = multiply.ztype ; % the ztype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 A = cast (A.matrix, multiply.xtype) ; % the xtype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 B = cast (B.matrix, multiply.ytype) ; % the ytype of the s emiring's multiply op[] LaTeX Warning: Reference `accummask' on page 131 undefined on input line 7197. [131] [132] LaTeX Warning: Reference `accummask' on page 133 undefined on input line 7250. LaTeX Warning: Reference `bfs' on page 133 undefined on input line 7267. Overfull \hbox (16.83702pt too wide) in paragraph at lines 7267--7271 [][]\OT1/cmtt/m/n/12 GrB_vxm []\OT1/cmr/m/n/12 in-stead of [][]\OT1/cmtt/m/n/12 GrB_mxv[]\OT1/cmr/m/n/12 , since the de-fault for-mat in Suite-Sparse:GraphBLA S [133] LaTeX Warning: Reference `accummask' on page 134 undefined on input line 7306. [134] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7335--7340 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 $ \OT1/cmr/m/n/12 de-note the bi-nary op-er-a-tor to be used. The com-pu-ta-tio n $[]$ [135] LaTeX Warning: Reference `accummask' on page 136 undefined on input line 7399. [136] LaTeX Warning: Reference `accummask' on page 137 undefined on input line 7456. [137] LaTeX Warning: Reference `accummask' on page 138 undefined on input line 7478. Overfull \hbox (4.8362pt too wide) in paragraph at lines 7476--7486 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 ^^H$ \OT1/cmr/m/n/12 de-note the bi-nar y op-er-a-tor to be used. The com-pu-ta-tion $[]$ [138] LaTeX Warning: Reference `accummask' on page 139 undefined on input line 7566. [139] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = A.pattern & ~B.pattern ; T.matrix (p) = cast (A.mat rix (p), add.ztype) ;[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = ~A.pattern & B.pattern ; T.matrix (p) = cast (B.mat rix (p), add.ztype) ;[] LaTeX Warning: Reference `fig_accummask' on page 140 undefined on input line 76 20. LaTeX Warning: Reference `accummask' on page 140 undefined on input line 7623. [140] LaTeX Warning: Reference `colon' on page 141 undefined on input line 7662. LaTeX Warning: Reference `accummask' on page 141 undefined on input line 7664. [141] LaTeX Warning: Reference `colon' on page 142 undefined on input line 7718. LaTeX Warning: Reference `accummask' on page 142 undefined on input line 7722. [142] Overfull \hbox (28.4599pt too wide) in paragraph at lines 7752--7759 [][][]\OT1/cmtt/m/n/12 GrB_Col_extract []\OT1/cmr/m/n/12 ex-tracts a sub-vec-to r from a ma-trix, iden-ti-cal to [][]\OT1/cmtt/m/n/12 t = A (I,j) LaTeX Warning: Reference `colon' on page 143 undefined on input line 7760. LaTeX Warning: Reference `accummask' on page 143 undefined on input line 7763. [143] LaTeX Warning: Reference `colon' on page 144 undefined on input line 7784. LaTeX Warning: Reference `assign' on page 144 undefined on input line 7789. LaTeX Warning: Reference `compare_assign' on page 144 undefined on input line 7 790. LaTeX Warning: Reference `duplicates' on page 144 undefined on input line 7791. LaTeX Warning: Reference `subassign_matrix' on page 144 undefined on input line 7819. [144] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7845--7845 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] Overfull \hbox (14.08577pt too wide) in paragraph at lines 7854--7865 [][] LaTeX Warning: Reference `accummask' on page 145 undefined on input line 7867. Overfull \hbox (16.61003pt too wide) in paragraph at lines 7882--7886 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, [][]\OT1/cmtt/m/n/12 GxB_Matrix _subassign[]\OT1/cmr/m/n/12 , the sub-ma-trix [][]\OT1/cmtt/m/n/12 C(I,J) [145] Overfull \hbox (11.08006pt too wide) in paragraph at lines 7903--7907 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, $[]$ is com-puted, where LaTeX Warning: Reference `accummask' on page 146 undefined on input line 7914. [146] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7964--7964 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(I ,j), unused if NULL[] Overfull \hbox (17.08905pt too wide) in paragraph at lines 7966--7974 \OT1/cmr/m/n/12 col-umn in-dex (and thus [][]\OT1/cmtt/m/n/12 nj=1[]\OT1/cmr/m/ n/12 ), and where all ma-tri-ces in [][]\OT1/cmtt/m/n/12 GxB_Matrix_subassign Overfull \hbox (1.92638pt too wide) in paragraph at lines 8001--8001 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,J), unused if NULL[] [147] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. LaTeX Warning: Reference `subassign_matrix_scalar' on page 148 undefined on inp ut line 8044. [148] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Overfull \hbox (1.92638pt too wide) in paragraph at lines 8067--8067 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] LaTeX Warning: Reference `subassign_matrix' on page 149 undefined on input line 8074. LaTeX Warning: Reference `matrix_setElement' on page 149 undefined on input lin e 8081. [149] LaTeX Warning: Reference `subassign' on page 150 undefined on input line 8110. LaTeX Warning: Reference `compare_assign' on page 150 undefined on input line 8 112. LaTeX Warning: Reference `colon' on page 150 undefined on input line 8115. LaTeX Warning: Reference `assign_matrix' on page 150 undefined on input line 81 41. [150] LaTeX Warning: Reference `accummask' on page 151 undefined on input line 8198. [151] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8229--8229 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(: ,j), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8243--8246 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [152] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8267--8267 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,:), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8281--8284 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [153] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. LaTeX Warning: Reference `duplicates' on page 154 undefined on input line 8315. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. LaTeX Warning: Reference `assign_matrix' on page 154 undefined on input line 83 45. [154] LaTeX Warning: Reference `matrix_setElement' on page 155 undefined on input lin e 8355. LaTeX Warning: Reference `duplicates' on page 155 undefined on input line 8370. [155] Overfull \hbox (30.07368pt too wide) in paragraph at lines 8384--8391 \OT1/cmr/m/n/12 as-sign-ment op-er-a-tions ([][]\OT1/cmtt/m/n/12 GrB_Matrix_ass ign_TYPE []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_Matrix_assign_TYPE[]\OT 1/cmr/m/n/12 ) Overfull \hbox (35.4029pt too wide) in paragraph at lines 8420--8420 [] \OT1/cmtt/m/n/10.95 % submatrix assignment with pre-sort of I and J; and remove duplicates[] [156] Overfull \hbox (5.09454pt too wide) in paragraph at lines 8436--8441 []\OT1/cmr/m/n/12 Results are al-ways well-defined in Suite-Sparse:GraphBLAS, b ut they might Overfull \hbox (8.22064pt too wide) in paragraph at lines 8470--8475 []\OT1/cmr/m/n/12 Instead, the first du-pli-cate in-dex of [][]\OT1/cmtt/m/n/12 I []\OT1/cmr/m/n/12 is dis-carded ([][]\OT1/cmtt/m/n/12 I [0] = 0[]\OT1/cmr/m/ n/12 , and [][]\OT1/cmtt/m/n/12 y(0)=5[]\OT1/cmr/m/n/12 ). [157] [158] [159] Overfull \hbox (10.16943pt too wide) in paragraph at lines 8588--8595 []\OT1/cmr/m/n/12 This no-ta-tion does not in-clude the de-tails of the [][]\OT 1/cmtt/m/n/12 GrB_COMP []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_REPLACE LaTeX Warning: Reference `accummask' on page 160 undefined on input line 8618. LaTeX Warning: Reference `accummask' on page 160 undefined on input line 8624. [160] LaTeX Warning: Reference `insubmatrix' on page 161 undefined on input line 8645 . LaTeX Warning: Reference `outsubmatrix' on page 161 undefined on input line 864 6. LaTeX Warning: Reference `insubmatrix' on page 161 undefined on input line 8650 . LaTeX Warning: Reference `tab:maskaccum' on page 161 undefined on input line 86 50. LaTeX Warning: Reference `sec:maskaccum' on page 161 undefined on input line 86 51. LaTeX Warning: Reference `insubmatrix' on page 161 undefined on input line 8653 . Overfull \hbox (20.92456pt too wide) in paragraph at lines 8673--8720 [][] Underfull \hbox (badness 10000) in paragraph at lines 8673--8720 [161] [162] LaTeX Warning: Reference `outsubmatrix' on page 163 undefined on input line 872 4. LaTeX Warning: Reference `outsubmatrix' on page 163 undefined on input line 872 8. LaTeX Warning: Reference `outsubmatrix' on page 163 undefined on input line 873 3. LaTeX Warning: Reference `insubmatrix' on page 163 undefined on input line 8734 . LaTeX Warning: Reference `insubmatrix' on page 163 undefined on input line 8738 . LaTeX Warning: Reference `outsubmatrix' on page 163 undefined on input line 874 3. LaTeX Warning: Reference `outsubmatrix' on page 163 undefined on input line 874 5. [163] [164] [165] Overfull \hbox (0.92876pt too wide) in paragraph at lines 8915--8917 []\OT1/cmr/m/n/12 The fol-low-ing guide-lines should be con-sid-ered when us-in g [][]\OT1/cmtt/m/n/12 GxB_subassign[]\OT1/cmr/m/n/12 , [166] LaTeX Warning: Reference `compare_assign' on page 167 undefined on input line 8 963. [167] Overfull \hbox (6.09775pt too wide) in paragraph at lines 8984--8993 \OT1/cmr/m/n/12 is pro-vided as the $\OML/cmm/m/it/12 x$ \OT1/cmr/m/n/12 in-put to the bi-nary op-er-a-tor. [][]\OT1/cmtt/m/n/12 GrB_*_apply_BinaryOp2nd* LaTeX Warning: Reference `accummask' on page 168 undefined on input line 9020. [168] LaTeX Warning: Reference `accummask' on page 169 undefined on input line 9051. [169] [170] [171] LaTeX Warning: Reference `accummask' on page 172 undefined on input line 9224. [172] Overfull \hbox (1.92638pt too wide) in paragraph at lines 9251--9251 []\OT1/cmtt/m/n/10 GrB_Info GxB_select // C = accum (C, o p(A,k)) or op(A',k)[] LaTeX Warning: Reference `accummask' on page 173 undefined on input line 9260. [173] Overfull \hbox (24.15204pt too wide) in paragraph at lines 9326--9369 [][] [174] [175] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. LaTeX Warning: Reference `accummask' on page 176 undefined on input line 9425. [176] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. LaTeX Warning: Reference `accummask' on page 177 undefined on input line 9478. [177] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. LaTeX Warning: Reference `reduce_vector_to_scalar' on page 178 undefined on inp ut line 9511. [178] LaTeX Warning: Reference `accummask' on page 179 undefined on input line 9537. Overfull \hbox (9.00838pt too wide) in paragraph at lines 9532--9539 [][][]\OT1/cmtt/m/n/12 GrB_transpose []\OT1/cmr/m/n/12 trans-poses a ma-trix [] []\OT1/cmtt/m/n/12 A[]\OT1/cmr/m/n/12 , just like the ar-ray trans-pose [][]\OT 1/cmtt/m/n/12 T = A.' [179] Overfull \hbox (10.46268pt too wide) in paragraph at lines 9578--9584 []\OT1/cmr/m/n/12 Since the in-put ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/ n/12 is trans-posed by the de-scrip-tor, SuiteSparse:Graph- [180] Overfull \hbox (10.68494pt too wide) in paragraph at lines 9640--9642 [][][]\OT1/cmtt/m/n/12 GrB_kronecker []\OT1/cmr/m/n/12 com-putes the Kro-necker prod-uct, $[]$ LaTeX Warning: Reference `accummask' on page 181 undefined on input line 9661. Overfull \hbox (14.29266pt too wide) in paragraph at lines 9663--9666 []\OT1/cmr/m/n/12 The op-er-a-tor [][]\OT1/cmtt/m/n/12 op []\OT1/cmr/m/n/12 may be a [][]\OT1/cmtt/m/n/12 GrB_BinaryOp[]\OT1/cmr/m/n/12 , a [][]\OT1/cmtt/m/n/ 12 GrB_Monoid[]\OT1/cmr/m/n/12 , or a [][]\OT1/cmtt/m/n/12 GrB_Semiring[]\OT1/c mr/m/n/12 . [181] Overfull \hbox (59.0538pt too wide) in paragraph at lines 9678--9685 \OT1/cmr/m/n/12 such as [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractTuples[]\OT1/cmr /m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_Matrix_type[]\OT1/cmr/m/n/12 , [182] Overfull \hbox (1.52788pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 As a re-sult, the ex-act con-tent and for-mat of what is printe d is implementation- Overfull \hbox (7.41396pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 dependent, and will change from ver-sion to ver-sion of Suite-S parse:GraphBLAS. [183] Overfull \hbox (59.93402pt too wide) in paragraph at lines 9831--9833 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Type_fprint (GrB_BOOL , "boolean type", GxB_COMPLETE, f) [184] Overfull \hbox (22.884pt too wide) in paragraph at lines 9851--9854 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_UnaryOp_fprint (GrB_L NOT, "not", GxB_COMPLETE, f) Overfull \hbox (66.10902pt too wide) in paragraph at lines 9872--9875 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_BinaryOp_fprint (GrB_ PLUS_FP64, "plus", GxB_COMPLETE, f) Overfull \hbox (35.23401pt too wide) in paragraph at lines 9893--9896 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_SelectOp_fprint (GxB_ TRIL, "tril", GxB_COMPLETE, f) [185] Overfull \hbox (35.23401pt too wide) in paragraph at lines 9914--9919 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Monoid_fprint (GxB_PL US_FP64_MONOID, "plus monoid", Overfull \hbox (22.884pt too wide) in paragraph at lines 9936--9940 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Semiring_fprint (GxB_ PLUS_TIMES_FP64, "standard", Overfull \hbox (41.40901pt too wide) in paragraph at lines 9957--9960 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Descriptor_fprint (d, "descriptor", GxB_COMPLETE, f) [186] Overfull \hbox (24.38643pt too wide) in paragraph at lines 9978--9980 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Matrix_fprint (A, "my matrix", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 9998--10000 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Vector_fprint (v, "my vector", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 10017--10019 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Scalar_fprint (s, "my scalar", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints [187] [188] [189] LaTeX Warning: Citation `Davis20' on page 190 undefined on input line 10099. LaTeX Warning: Citation `Beamer:2012:DOB' on page 190 undefined on input line 1 0110. LaTeX Warning: Citation `Yang:2018:IPE' on page 190 undefined on input line 101 10. LaTeX Warning: Citation `DavisAznavehKolodziej19' on page 190 undefined on inpu t line 10119. [190] [191] [192] [193] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10294--10294 [] \OT1/cmtt/m/n/10 if (v_output == NULL) LAGRAPH_ERROR ("argument missing", GrB_NULL_POINTER) ;[] [194] LaTeX Warning: Citation `Luby86' on page 195 undefined on input line 10308. Overfull \hbox (14.24648pt too wide) in paragraph at lines 10344--10344 [] \OT1/cmtt/m/n/10 GrB_vxm (neighbor_max, candidates, NULL, maxFirst, p rob, A, r_desc) ;[] [195] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseMult (prob, candidates, NULL, set_random, d egrees, X, r_desc) ;[] Overfull \hbox (12.42628pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseAdd (new_members, NULL,NULL, GrB_GT_FP64, p rob, neighbor_max,0);[] [196] Overfull \hbox (23.03032pt too wide) in paragraph at lines 10400--10408 \OT1/cmr/m/n/12 The col-umn [][]\OT1/cmtt/m/n/12 A(:,j) []\OT1/cmr/m/n/12 is th e ad-ja-cency of node [][]\OT1/cmtt/m/n/12 j[]\OT1/cmr/m/n/12 , and the dot pro d-uct [][]\OT1/cmtt/m/n/12 prob'*A(:,j) LaTeX Warning: Reference `bfs' on page 197 undefined on input line 10438. LaTeX Warning: Reference `transpose' on page 197 undefined on input line 10441. [197] [198] [199] LaTeX Warning: Citation `Davis07' on page 200 undefined on input line 10587. LaTeX Warning: Citation `Davis07' on page 200 undefined on input line 10595. LaTeX Warning: Citation `Higham' on page 200 undefined on input line 10615. LaTeX Warning: Citation `Wathen' on page 200 undefined on input line 10617. [200] [201] Overfull \hbox (24.54538pt too wide) in paragraph at lines 10664--10671 \OT1/cmr/m/n/12 ca-tion to con-struct the tu-ple list, and is al-most as fast a s us-ing [][]\OT1/cmtt/m/n/12 GrB_Matrix_build[]\OT1/cmr/m/n/12 . Overfull \hbox (3.74657pt too wide) in paragraph at lines 10699--10699 [] \OT1/cmtt/m/n/10 GrB_Matrix_setElement (F, em (krow,kcol) , krow, kcol) ;[] [202] LaTeX Warning: Reference `random' on page 203 undefined on input line 10726. [203] [204] [205] LaTeX Warning: Citation `WolfBerryStark15' on page 206 undefined on input line 10900. LaTeX Warning: Citation `Burkhardt16' on page 206 undefined on input line 10902 . LaTeX Warning: Citation `AzadBulucGilbert15' on page 206 undefined on input lin e 10904. LaTeX Warning: Citation `Cohen09' on page 206 undefined on input line 10904. LaTeX Warning: Citation `WolfDeveciBerryHammondRajamanickam17' on page 206 unde fined on input line 10906. LaTeX Warning: Citation `Davis18b' on page 206 undefined on input line 10919. [206] LaTeX Warning: Reference `type_new' on page 207 undefined on input line 10931. Overfull \hbox (32.48866pt too wide) in paragraph at lines 10948--10964 [][] Underfull \hbox (badness 10000) in paragraph at lines 10948--10964 [207] Overfull \hbox (30.00606pt too wide) in paragraph at lines 10988--10988 []\OT1/cmr/bx/n/14.4 User ap-pli-ca-tions us-ing OpenMP or POSIX pthreads LaTeX Warning: Reference `sec:install' on page 208 undefined on input line 1099 9. Overfull \hbox (4.40424pt too wide) in paragraph at lines 10992--11000 \OT1/cmr/m/n/12 Two ex-am-ple demo pro-grams are in-cluded that il-lus-trate ho w a multi-threaded [208] Overfull \hbox (69.41573pt too wide) in paragraph at lines 11050--11050 []\OT1/cmr/bx/n/17.28 Compiling and In-stalling Suite-Sparse:GraphBLAS Overfull \hbox (16.05841pt too wide) in paragraph at lines 11073--11078 [][]\OT1/cmtt/m/n/12 #pragma omp atomic write[]\OT1/cmr/bx/n/12 . The use of gc c for Suite-Sparse:GraphBLAS [209] Overfull \hbox (31.69743pt too wide) in paragraph at lines 11160--11162 []\OT1/cmr/m/n/12 Open a ter-mi-nal win-dow and type this in the [][]\OT1/cmtt/ m/n/12 SuiteSparse/GraphBLAS/build [210] Overfull \hbox (33.58942pt too wide) in paragraph at lines 11169--11172 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 cmake []\OT1/cmr/m/n/12 com-mand gen -er-ates many files in [][]\OT1/cmtt/m/n/12 SuiteSparse/GraphBLAS/build[]\OT1/c mr/m/n/12 , Overfull \hbox (32.85522pt too wide) in paragraph at lines 11169--11172 \OT1/cmr/m/n/12 and the file [][]\OT1/cmtt/m/n/12 graphblas.sln []\OT1/cmr/m/n/ 12 in par-tic-u-lar. Open the gen-er-ated [][]\OT1/cmtt/m/n/12 graphblas.sln Overfull \hbox (15.61084pt too wide) in paragraph at lines 11173--11178 [][]\OT1/cmtt/m/n/12 C/C++[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 General []\O T1/cmr/m/n/12 and change the pa-ram-e-ter [][]\OT1/cmtt/m/n/12 Multiprocessor C ompilation Overfull \hbox (46.26897pt too wide) in paragraph at lines 11179--11185 []\OT1/cmr/m/n/12 Select the [][]\OT1/cmtt/m/n/12 Build []\OT1/cmr/m/n/12 menu item at the top of the win-dow and se-lect [][]\OT1/cmtt/m/n/12 Build Solution[ ]\OT1/cmr/m/n/12 . Overfull \hbox (5.25778pt too wide) in paragraph at lines 11179--11185 [][]\OT1/cmtt/m/n/12 graphblas.dll[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 grap hblas.lib[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 graphblas.exp []\OT1/cmr/ m/n/12 files there. Please Overfull \hbox (72.643pt too wide) in paragraph at lines 11197--11200 []\OT1/cmr/m/n/12 From the top left side of the [][]\OT1/cmtt/m/n/12 System []\ OT1/cmr/m/n/12 win-dow, se-lect [][]\OT1/cmtt/m/n/12 Advanced System Settings[] \OT1/cmr/m/n/12 . Overfull \hbox (10.57393pt too wide) in paragraph at lines 11200--11203 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 Systems Properties []\OT1/cmr/m/n/12 win-dow should ap-pear with the [][]\OT1/cmtt/m/n/12 Advanced [211] Overfull \hbox (13.64095pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 If the above steps do not work, you can in-stead copy the [][ ]\OT1/cmtt/m/n/12 graphblas.* Overfull \hbox (3.27658pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 files from [][]\OT1/cmtt/m/n/12 GraphBLAS\build\Release []\OT 1/cmr/m/n/12 into any ex-ist-ing folder listed Overfull \hbox (10.70392pt too wide) in paragraph at lines 11226--11230 \OT1/cmr/m/n/12 First, com-pile the Suite-Sparse:GraphBLAS dy-namic li-brary ([ ][]\OT1/cmtt/m/n/12 libgraphblas.so Overfull \hbox (20.77408pt too wide) in paragraph at lines 11239--11242 []\OT1/cmr/m/n/12 Follow the re-main-ing in-struc-tions in the [][]\OT1/cmtt/m/ n/12 GraphBLAS/GraphBLAS/README.md LaTeX Warning: Reference `sec:windows' on page 212 undefined on input line 1125 8. [212] Overfull \hbox (21.92802pt too wide) in paragraph at lines 11270--11275 \OT1/cmr/m/n/12 You may need to add the above lines in your [][]\OT1/cmtt/m/n/1 2 Documents/MATLAB/startup.m Overfull \hbox (34.38116pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 sult, [][]\OT1/cmtt/m/n/12 GxB_ASIN_FC32[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_ASIN_FC64 []GxB_ASINH_FC32[]\OT1/cmr/m/n/12 , and [][]\OT 1/cmtt/m/n/12 GxB_ASINH_FC64 Overfull \hbox (4.84929pt too wide) in paragraph at lines 11284--11293 []\OT1/cmr/m/n/12 do not work prop-erly on Win-dows. This af-fects the [][]\OT1 /cmtt/m/n/12 GrB/asin[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB/acsc[]\OT1/cm r/m/n/12 , Overfull \hbox (99.57925pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 the MAT-LAB tests by-passed in [][]\OT1/cmtt/m/n/12 gbtest76.m []\OT1/cmr/m/n/12 for de-tails, in the [][]\OT1/cmtt/m/n/12 GraphBLAS/GraphBLAS /test Overfull \hbox (34.12076pt too wide) in paragraph at lines 11304--11315 \OT1/cmr/m/n/12 com-plete. This can be done for all ob-jects via [][]\OT1/cmtt/ m/n/12 GrB_Matrix_wait[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Vector_wait[ ]\OT1/cmr/m/n/12 , [213] Overfull \hbox (17.6559pt too wide) in paragraph at lines 11328--11335 \OT1/cmr/m/n/12 pthreads. If OpenMP is present, it uses OpenMP crit-i-cal sec-t ions for [][]\OT1/cmtt/m/n/12 GrB_wait() Overfull \hbox (0.44614pt too wide) in paragraph at lines 11362--11364 []\OT1/cmr/m/n/12 no user thread-ing: com-pile with [][]\OT1/cmtt/m/n/12 cmake -DUSER_NONE=1[]\OT1/cmr/m/n/12 . \OT1/cmr/bx/n/12 Graph-BLAS Overfull \hbox (9.50793pt too wide) in paragraph at lines 11371--11374 [][]\OT1/cmtt/m/n/12 GxB_BY_ROW []\OT1/cmr/m/n/12 for-mat. You can change the d e-fault at com-pile time to [][]\OT1/cmtt/m/n/12 GxB_BY_COL [214] LaTeX Warning: Reference `gxbset' on page 215 undefined on input line 11380. LaTeX Warning: Reference `gxbget' on page 215 undefined on input line 11380. Overfull \hbox (52.64896pt too wide) in paragraph at lines 11387--11387 [] \OT1/cmtt/m/n/10.95 if (s == GxB_BY_COL) printf ("all new matrices are st ored by column\n") :[] Overfull \hbox (3.09839pt too wide) in paragraph at lines 11403--11409 \OT1/cmr/m/n/12 Then do [][]\OT1/cmtt/m/n/12 make []\OT1/cmr/m/n/12 in the [][] \OT1/cmtt/m/n/12 build []\OT1/cmr/m/n/12 di-rec-tory. If this still fails, see the [][]\OT1/cmtt/m/n/12 CMakeLists.txt Overfull \hbox (0.91077pt too wide) in paragraph at lines 11426--11426 [] \OT1/cmtt/m/n/10.95 # cmake 2.8 workaround: gcc needs to be told to d o ANSI C11.[] [215] Overfull \hbox (5.06398pt too wide) in paragraph at lines 11432--11435 []\OT1/cmr/m/n/12 file, but these are meant only for code de-vel-op-ment of Sui te-Sparse:GraphBLAS Overfull \hbox (8.18504pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 both at com-pile time and then at run time with [][]\OT1/cmtt/m /n/12 GxB_set [](GxB_BURBLE, true)[]\OT1/cmr/m/n/12 , Overfull \hbox (25.41429pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 or [][]\OT1/cmtt/m/n/12 GrB.burble(1) []\OT1/cmr/m/n/12 in the MAT-LAB in-ter-face. If en-abled, Suite-Sparse:GraphBLAS [216] Overfull \hbox (1.21198pt too wide) in paragraph at lines 11480--11483 \OT1/cmr/m/n/12 To in-stall the li-brary (typ-i-cally in [][]\OT1/cmtt/m/n/12 / usr/local/lib []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 /usr/local/include [217] Overfull \hbox (0.30112pt too wide) in paragraph at lines 11543--11550 \OT1/cmss/m/n/12 redislabs . com / redis-[]enterprise / technology / redisgraph /$[][]\OT1/cmr/m/n/12 ), a graph database mod- Overfull \hbox (36.16724pt too wide) in paragraph at lines 11543--11550 [][]$\OT1/cmss/m/n/10 https : / / redislabs . com / blog / new-[]redisgraph-[]1 -[]0-[]achieves-[]600x-[]faster-[]performance-[]graph-[]databases/$[][]\OT1/cmr /m/n/12 ). [218] [219] No file GraphBLAS_UserGuide.bbl. 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Output written on tcrm1200.600gf (128 characters, 28032 bytes). Transcript written on tcrm1200.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tcrm1200.600pk: successfully generated. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `GraphBLAS_UserGuide.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on GraphBLAS_UserGuide.pdf (219 pages, 778239 bytes). Transcript written on GraphBLAS_UserGuide.log. bibtex GraphBLAS_UserGuide This is BibTeX, Version 0.99d (TeX Live 2020/Debian) The top-level auxiliary file: GraphBLAS_UserGuide.aux The style file: annotate.bst Database file #1: GraphBLAS_UserGuide.bib Warning--empty institution in spec Warning--empty institution in Kepner2017 (There were 2 warnings) pdflatex GraphBLAS_UserGuide.tex This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./GraphBLAS_UserGuide.tex LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2432. [53] [54] [55] Overfull \hbox (28.54279pt too wide) in paragraph at lines 2534--2534 []\OT1/cmr/bx/n/14.4 SuiteSparse:GraphBLAS se-lect op-er-a-tors: \OT1/cmss/m/n/ 14.4 GxB[]SelectOp Overfull \hbox (8.99652pt too wide) in paragraph at lines 2560--2560 [] \OT1/cmtt/m/n/10 const void *x, // value of A(i,j), or NULL if f is type-generic[] Overfull \hbox (13.94386pt too wide) in paragraph at lines 2568--2596 [][] [56] Overfull \hbox (1.92638pt too wide) in paragraph at lines 2633--2633 [] \OT1/cmtt/m/n/10 GrB_Type ttype // type of input thunk, or N ULL if type-generic[] [57] Overfull \hbox (74.71048pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GxB_SelectOp_wait(&selectop) Overfull \hbox (23.8884pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GxB_SelectOp_wait(&selectop)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 selectop Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2680. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2680. [58] [59] [60] Overfull \hbox (23.23036pt too wide) in paragraph at lines 2827--2833 [][]\OT1/cmtt/m/n/12 GrB_LAND_MONOID_BOOL[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/ 12 GrB_LXOR_MONOID_BOOL[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GrB_LXNOR_M ONOID_BOOL[]\OT1/cmr/m/n/12 . [61] Overfull \hbox (0.98737pt too wide) in paragraph at lines 2918--2923 \OT1/cmr/m/n/12 ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1/cm tt/m/n/12 GrB_Monoid_wait(&monoid) [62] Overfull \hbox (7.17633pt too wide) in paragraph at lines 2940--2940 []\OT1/cmtt/m/n/10 GrB_Info GxB_Monoid_terminal_new // create a monoid that has a terminal value[] [63] [64] [65] Overfull \hbox (11.07724pt too wide) in paragraph at lines 3166--3172 \OT1/cmr/m/n/12 types: [][]\OT1/cmtt/m/n/12 PLUS_TIMES[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 PLUS_MIN[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_PLUS[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_TIMES[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m /n/12 MIN_FIRST[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_SECOND[]\OT1/cmr/m/ n/12 , [66] Overfull \hbox (4.26732pt too wide) in paragraph at lines 3188--3194 []\OT1/cmr/m/n/12 20 mul-ti-ply op-er-a-tors ([][]\OT1/cmtt/m/n/12 FIRST[]\OT1/ cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 SECOND[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 PAIR[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN[]\OT1/cmr/m/n/12 , [][]\OT1/ cmtt/m/n/12 MAX[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 PLUS[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MINUS[]\OT1/cmr/m/n/12 , [67] Overfull \hbox (38.7428pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Semiring_wait(&semiring) Overfull \hbox (23.8884pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GrB_Semiring_wait(&semiring)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 semiring [68] Overfull \hbox (7.17633pt too wide) in paragraph at lines 3307--3307 [] \OT1/cmtt/m/n/10 GrB_BinaryOp *multiply, // returns multiply oper ator of the semiring[] [69] Overfull \hbox (22.45738pt too wide) in paragraph at lines 3360--3375 [][] Underfull \hbox (badness 10000) in paragraph at lines 3360--3375 [70] [71] [72] [73] [74] Overfull \hbox (12.47293pt too wide) in paragraph at lines 3667--3671 \OT1/cmr/m/n/12 of the given type. This is anal-o-gous to MAT-LAB state-ment [] []\OT1/cmtt/m/n/12 v = sparse (n,1)[]\OT1/cmr/m/n/12 , [75] Overfull \hbox (9.02386pt too wide) in paragraph at lines 3748--3754 \OT1/cmr/m/n/12 were cre-ated fresh with [][]\OT1/cmtt/m/n/12 GrB_Vector_new[]\ OT1/cmr/m/n/12 . Anal-o-gous with [][]\OT1/cmtt/m/n/12 v (:) = sparse(0) [76] Overfull \hbox (33.82916pt too wide) in paragraph at lines 3813--3815 [][][]\OT1/cmtt/m/n/12 GxB_Vector_type []\OT1/cmr/m/n/12 re-turns the type of a vec-tor. Anal-o-gous to [][]\OT1/cmtt/m/n/12 type = class (v) [77] Overfull \hbox (5.42024pt too wide) in paragraph at lines 3871--3876 \OT1/cmr/m/n/12 op-er-a-tion is ex-actly like set-ting a sin-gle en-try in an [ ][]\OT1/cmtt/m/n/12 n[]\OT1/cmr/m/n/12 -by-1 ma-trix, [][]\OT1/cmtt/m/n/12 A(i, 0) = x[]\OT1/cmr/m/n/12 , Overfull \hbox (22.40071pt too wide) in paragraph at lines 3893--3902 [][][]\OT1/cmtt/m/n/12 GrB_Vector_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a vec-tor, [][]\OT1/cmtt/m/n/12 x = v(i)[]\OT1/cmr/m/n/12 . [78] [79] [80] Overfull \hbox (24.5408pt too wide) in paragraph at lines 4002--4040 [][] [81] [82] Overfull \hbox (21.21309pt too wide) in paragraph at lines 4164--4166 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows []\OT1/cmr/m/n/12 re-turns the num-ber of rows of a ma-trix ([][]\OT1/cmtt/m/n/12 nrows=size(A,1) Overfull \hbox (39.81706pt too wide) in paragraph at lines 4184--4186 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_ncols []\OT1/cmr/m/n/12 re-turns the num-ber of columns of a ma-trix ([][]\OT1/cmtt/m/n/12 ncols=size(A,2) [83] [84] [85] [86] Overfull \hbox (11.6521pt too wide) in paragraph at lines 4389--4402 [][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G xB_Matrix_type[]\OT1/cmr/m/n/12 , and of course [][]\OT1/cmtt/m/n/12 GrB_Matrix _setElement [87] Overfull \hbox (21.81322pt too wide) in paragraph at lines 4424--4426 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a ma-trix [][]\OT1/cmtt/m/n/12 x=A(i,j)[]\OT1/cmr/m/n/12 . [88] Overfull \hbox (39.24196pt too wide) in paragraph at lines 4508--4517 []\OT1/cmr/m/n/12 The num-ber of tu-ples in the ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/n/12 is given by [][]\OT1/cmtt/m/n/12 GrB_Matrix_nvals(&anvals,A)[ ]\OT1/cmr/m/n/12 . [89] [90] Overfull \hbox (6.42572pt too wide) in paragraph at lines 4571--4575 \OT1/cmr/m/n/12 The im-port/export func-tions al-low the user ap-pli-ca-tion to cre-ate a [][]\OT1/cmtt/m/n/12 GrB_Matrix Overfull \hbox (3.48825pt too wide) in paragraph at lines 4585--4589 []\OT1/cmr/m/n/12 incorporate them into its in-ter-nal data struc-ture for the new [][]\OT1/cmtt/m/n/12 GrB_Matrix [91] [92] Overfull \hbox (2.4533pt too wide) in paragraph at lines 4704--4707 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GxB_Vector_import []\OT1/cmr/m/n/12 func-tion is a fast way to con-struct a [][]\OT1/cmtt/m/n/12 GrB_Vector[]\OT1/c mr/m/n/12 , Overfull \hbox (8.99652pt too wide) in paragraph at lines 4720--4720 [] \OT1/cmtt/m/n/10 GxB_Matrix_import_CSC (&A, type, n, 1, nvals, -1, &Ap, & vi, &vx, desc) ;[] [93] [94] [95] Overfull \hbox (19.49643pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 2, 5, 7, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Aj [ ] = { 0, 2, 0, 1, 3, 1, 2, 0, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.2, 3.1, 2.9, 0.9, 1.7, 3.0, 3. 5, 0.4, 1.0 } ;[] [96] [97] Overfull \hbox (19.49643pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 3, 6, 8, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ai [ ] = { 0, 1, 3, 1, 2, 3, 0, 2, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.1, 3.5, 2.9, 1.7, 0.4, 3.2, 3. 0, 0.9, 1.0 } ;[] Overfull \hbox (1.55626pt too wide) in paragraph at lines 5033--5036 []\OT1/cmr/m/n/12 That is, the row in-dices of col-umn 1 (the sec-ond col-umn) are in [][]\OT1/cmtt/m/n/12 Ai [3..5][]\OT1/cmr/m/n/12 , [98] [99] [100] [101] Overfull \hbox (1.92638pt too wide) in paragraph at lines 5212--5212 [] \OT1/cmtt/m/n/10 int64_t nonempty, // number of columns in Ah with at least one entry,[] [102] [103] [104] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5385--5385 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSR // export and free a hy persparse CSR matrix[] [105] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5446--5446 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSC // export and free a hy persparse CSC matrix[] [106] [107] [108] Overfull \hbox (5.91904pt too wide) in paragraph at lines 5616--5622 []\OT1/cmr/m/n/12 Vectors and scalars are never trans-posed via the de-scrip-to r. If a method's Overfull \hbox (4.20209pt too wide) in paragraph at lines 5616--5622 [][]\OT1/cmtt/m/n/12 desc [GrB_INP0] []\OT1/cmr/m/n/12 mod-i-fies the ma-trix p a-ram-e-ter and [][]\OT1/cmtt/m/n/12 desc [GrB_INP1] Overfull \hbox (22.34908pt too wide) in paragraph at lines 5636--5640 [][][]\OT1/cmtt/m/n/12 GxB_AxB_SAXPY[]\OT1/cmr/m/n/12 : se-lect any saxpy-based method: [][]\OT1/cmtt/m/n/12 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , [109] LaTeX Warning: Citation `Gustavson78' on page 110 undefined on input line 5642. LaTeX Warning: Citation `10.1145/3229710.3229720' on page 110 undefined on inpu t line 5658. [110] Overfull \hbox (7.86778pt too wide) in paragraph at lines 5719--5724 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Descriptor_wait(&d) Overfull \hbox (17.0722pt too wide) in paragraph at lines 5742--5751 [][][]\OT1/cmtt/m/n/12 GrB_Descriptor_set []\OT1/cmr/m/n/12 sets a de-scrip-tor field ([][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G rB_MASK[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , Overfull \hbox (6.71817pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_Ax B_METHOD[]\OT1/cmr/m/n/12 ) to a par-tic-u-lar value ([][]\OT1/cmtt/m/n/12 GxB_ DEFAULT[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_COMP[]\OT1/cmr/m/n/12 , Overfull \hbox (75.18883pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_ COMP+GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_TRAN[]\OT1/cmr/m /n/12 , [][]\OT1/cmtt/m/n/12 GrB_REPLACE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , Underfull \hbox (badness 2020) in paragraph at lines 5765--5769 [][][]\OT1/cmtt/m/n/10.95 GrB_REPLACE[]\OT1/cmr/m/n/10.95 : Af-ter com-put-ing Underfull \hbox (badness 2922) in paragraph at lines 5765--5769 []$\OT1/cmr/m/n/10.95 , the out-put \OT1/cmr/bx/n/10.95 C \OT1/cmr/m/n/10.95 is Underfull \hbox (badness 2035) in paragraph at lines 5765--5769 \OT1/cmr/m/n/10.95 cleared of all en-tries. Then Underfull \hbox (badness 4981) in paragraph at lines 5777--5781 \OT1/cmr/m/n/10.95 op-er-a-tion, while [][]\OT1/cmtt/m/n/10.95 Mask(i,j)=1 Underfull \hbox (badness 1540) in paragraph at lines 5782--5787 [][][]\OT1/cmtt/m/n/10.95 GrB_STRUCTURE[]\OT1/cmr/m/n/10.95 : The val-ues of Underfull \hbox (badness 5667) in paragraph at lines 5782--5787 \OT1/cmr/m/n/10.95 the Mask are ig-nored. If Underfull \hbox (badness 1178) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 Mask(i,j) []\OT1/cmr/m/n/10.95 is an en-try in the Underfull \hbox (badness 4872) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 GrB_COMP []\OT1/cmr/m/n/10.95 and [][]\OT1/cmtt/m/n/10. 95 GrB_STRUCTURE Underfull \hbox (badness 3838) in paragraph at lines 5793--5796 [][][]\OT1/cmtt/m/n/10.95 GrB_TRAN[]\OT1/cmr/m/n/10.95 : The first in-put is Underfull \hbox (badness 6252) in paragraph at lines 5811--5813 \OT1/cmr/m/n/10.95 method is used to com-pute Overfull \hbox (58.92297pt too wide) in paragraph at lines 5753--5817 [] Underfull \hbox (badness 10000) in paragraph at lines 5753--5817 [111] [112] [113] Overfull \hbox (28.49763pt too wide) in paragraph at lines 5913--5961 [] [114] Overfull \hbox (14.24648pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 H = G ; // valid; creates a 2nd handle o f the same object[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 GrB_free (&G) ; // valid; G is freed and set to NULL; H now undefined[] [115] [116] [117] Overfull \hbox (0.7007pt too wide) in paragraph at lines 6117--6125 []\OT1/cmr/m/n/12 SuiteSparse:GraphBLAS in-cludes two type-generic meth-ods, [] []\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/n/12 and LaTeX Warning: Citation `BulucGilbert08' on page 118 undefined on input line 61 31. LaTeX Warning: Citation `BulucGilbert12' on page 118 undefined on input line 61 31. Overfull \hbox (12.98712pt too wide) in paragraph at lines 6136--6141 [][][]\OT1/cmtt/m/n/12 GxB_set (GrB_Matrix A, field, value) []\OT1/cmr/m/n/12 p ro-vides hints to Suite-Sparse: Overfull \hbox (1.08037pt too wide) in paragraph at lines 6156--6158 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Matrix A, field, &value) []\OT1/cmr/m/n/12 re-trieves the cur-rent value Overfull \hbox (4.81274pt too wide) in paragraph at lines 6159--6161 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Descriptor desc, field, &value) []\OT1/cmr/ m/n/12 re-trieves the value [118] Overfull \hbox (4.50215pt too wide) in paragraph at lines 6218--6221 \OT1/cmr/m/n/12 The de-fault for [][]\OT1/cmtt/m/n/12 nthreads_max []\OT1/cmr/m /n/12 is the re-turn value from [][]\OT1/cmtt/m/n/12 omp_get_max_threads[]\OT1/ cmr/m/n/12 , [119] [120] Overfull \hbox (11.60793pt too wide) in paragraph at lines 6269--6276 \OT1/cmr/m/n/12 Graph-BLAS API Spec-i-fi-ca-tion, where the breadth-first searc h [][]\OT1/cmtt/m/n/12 BFS []\OT1/cmr/m/n/12 uses [][]\OT1/cmtt/m/n/12 GrB_vxm Overfull \hbox (14.33583pt too wide) in paragraph at lines 6294--6299 \OT1/cmr/m/n/12 can be com-piled with [][]\OT1/cmtt/m/n/12 -DBYCOL[]\OT1/cmr/m/ n/12 , which changes the de-fault for-mat to [][]\OT1/cmtt/m/n/12 GxB_BY_COL[]\ OT1/cmr/m/n/12 , LaTeX Warning: Citation `BulucGilbert08' on page 121 undefined on input line 63 13. LaTeX Warning: Citation `BulucGilbert12' on page 121 undefined on input line 63 13. [121] Overfull \hbox (3.22508pt too wide) in paragraph at lines 6347--6351 []\OT1/cmr/m/n/12 If a ma-trix is cur-rently hy-per-sparse, it can be con-verte d to non-hypersparse [122] Overfull \hbox (18.1564pt too wide) in paragraph at lines 6376--6381 [][]\OT1/cmtt/m/n/12 GxB_BY_COL []\OT1/cmr/m/n/12 for-mat, as de-ter-mined by t he last call to [][]\OT1/cmtt/m/n/12 GxB_set(GxB_FORMAT,...) Overfull \hbox (3.83885pt too wide) in paragraph at lines 6386--6391 \OT1/cmr/m/n/12 type of the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 pa-ram -e-ter for the sec-ond ar-gu-ment of [][]\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/ n/12 and [][]\OT1/cmtt/m/n/12 GxB_get[]\OT1/cmr/m/n/12 , Overfull \hbox (19.49643pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_HYPER = 0, // defines switch to hypersparse for mat (double value)[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_FORMAT = 1, // defines CSR/CSC format: GxB_BY_RO W or GxB_BY_COL[] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_MODE = 2, // mode passed to GrB_init (blocking or non-blocking)[] [123] [124] [125] Overfull \hbox (19.69768pt too wide) in paragraph at lines 6531--6535 \OT1/cmr/m/n/12 This is de-ter-mined dur-ing in-stal-la-tion (see Sec-tion [][] 12.4[][]). Since [][]\OT1/cmtt/m/n/12 GxB_THREAD_NONE Overfull \hbox (14.24648pt too wide) in paragraph at lines 6567--6567 [] \OT1/cmtt/m/n/10 printf ("GraphBLAS is multi-threaded, internally, us ing OpenMP.\n") ;[] [126] [127] Overfull \hbox (44.81151pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 con-sis-tent with the other us-ages of this generic func-tion. Un-like [][]\OT1/cmtt/m/n/12 GrB_Descriptor_set[]\OT1/cmr/m/n/12 , Overfull \hbox (49.57497pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 may also be [] []\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_ CHUNK[]\OT1/cmr/m/n/12 . Re-fer to Sec-tions [][]5.11.3[][] and [][]5.11.4[][] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (s == GxB_BY_COL) printf ("all new matrices are store d by column\n") :[] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (mode == GrB_BLOCKING) printf ("GrB_init(GrB_BLOCKING ) was called.\n") :[] [128] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is currently %shypersparse\n", is_hype r ? "not " : " ") ;[] Overfull \hbox (19.49643pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is stored by %s\n", (s == GxB_BY_COL) ? "col" : "row") ;[] Overfull \hbox (1.31094pt too wide) in paragraph at lines 6762--6767 [][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_MASK[ ]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , [][]\OT1/cm tt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_AxB_METHOD[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , [129] [130] [131] Overfull \hbox (2.24268pt too wide) in paragraph at lines 6872--6879 \OT1/cmr/m/n/12 MATLAB uses a colon no-ta-tion to in-dex into ma-tri-ces, such as [][]\OT1/cmtt/m/n/12 C=A(2:4,3:8)[]\OT1/cmr/m/n/12 , [132] Overfull \hbox (5.33707pt too wide) in paragraph at lines 6932--6935 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GrB_extract[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 GrB_assign[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GxB_suba ssign []\OT1/cmr/m/n/12 op-er-a-tions (de-scribed Overfull \hbox (6.98373pt too wide) in paragraph at lines 6967--6974 \OT1/cmr/m/n/12 the spe-cial value [][]\OT1/cmtt/m/n/12 ni = GxB_RANGE[]\OT1/cm r/m/n/12 . The be-gin-ning in-dex is [][]\OT1/cmtt/m/n/12 I[GxB_BEGIN] [133] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7011--7011 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i <= I [GxB_END] ; i + = I [GxB_INC])[] [134] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7057--7057 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i >= I [GxB_END] ; i - = I [GxB_INC])[] [135] [136] Overfull \hbox (24.74638pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.matrix (:,:) = identity ; % the identity of th e semiring's monoid[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.class = multiply.ztype ; % the ztype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 A = cast (A.matrix, multiply.xtype) ; % the xtype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 B = cast (B.matrix, multiply.ytype) ; % the ytype of the s emiring's multiply op[] [137] [138] Overfull \hbox (16.83702pt too wide) in paragraph at lines 7267--7271 [][]\OT1/cmtt/m/n/12 GrB_vxm []\OT1/cmr/m/n/12 in-stead of [][]\OT1/cmtt/m/n/12 GrB_mxv[]\OT1/cmr/m/n/12 , since the de-fault for-mat in Suite-Sparse:GraphBLA S [139] [140] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7335--7340 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 $ \OT1/cmr/m/n/12 de-note the bi-nary op-er-a-tor to be used. The com-pu-ta-tio n $[]$ [141] [142] [143] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7476--7486 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 ^^H$ \OT1/cmr/m/n/12 de-note the bi-nar y op-er-a-tor to be used. The com-pu-ta-tion $[]$ [144] [145] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = A.pattern & ~B.pattern ; T.matrix (p) = cast (A.mat rix (p), add.ztype) ;[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = ~A.pattern & B.pattern ; T.matrix (p) = cast (B.mat rix (p), add.ztype) ;[] [146] [147] [148] Overfull \hbox (28.4599pt too wide) in paragraph at lines 7752--7759 [][][]\OT1/cmtt/m/n/12 GrB_Col_extract []\OT1/cmr/m/n/12 ex-tracts a sub-vec-to r from a ma-trix, iden-ti-cal to [][]\OT1/cmtt/m/n/12 t = A (I,j) [149] [150] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7845--7845 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] Overfull \hbox (14.08577pt too wide) in paragraph at lines 7854--7865 [][] Overfull \hbox (16.61003pt too wide) in paragraph at lines 7882--7886 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, [][]\OT1/cmtt/m/n/12 GxB_Matrix _subassign[]\OT1/cmr/m/n/12 , the sub-ma-trix [][]\OT1/cmtt/m/n/12 C(I,J) [151] Overfull \hbox (11.08006pt too wide) in paragraph at lines 7903--7907 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, $[]$ is com-puted, where [152] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7964--7964 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(I ,j), unused if NULL[] Overfull \hbox (17.08905pt too wide) in paragraph at lines 7966--7974 \OT1/cmr/m/n/12 col-umn in-dex (and thus [][]\OT1/cmtt/m/n/12 nj=1[]\OT1/cmr/m/ n/12 ), and where all ma-tri-ces in [][]\OT1/cmtt/m/n/12 GxB_Matrix_subassign Overfull \hbox (1.92638pt too wide) in paragraph at lines 8001--8001 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,J), unused if NULL[] [153] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. [154] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Overfull \hbox (1.92638pt too wide) in paragraph at lines 8067--8067 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] [155] [156] [157] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8229--8229 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(: ,j), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8243--8246 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [158] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8267--8267 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,:), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8281--8284 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [159] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. [160] [161] Overfull \hbox (30.07368pt too wide) in paragraph at lines 8384--8391 \OT1/cmr/m/n/12 as-sign-ment op-er-a-tions ([][]\OT1/cmtt/m/n/12 GrB_Matrix_ass ign_TYPE []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_Matrix_assign_TYPE[]\OT 1/cmr/m/n/12 ) Overfull \hbox (35.4029pt too wide) in paragraph at lines 8420--8420 [] \OT1/cmtt/m/n/10.95 % submatrix assignment with pre-sort of I and J; and remove duplicates[] [162] Overfull \hbox (5.09454pt too wide) in paragraph at lines 8436--8441 []\OT1/cmr/m/n/12 Results are al-ways well-defined in Suite-Sparse:GraphBLAS, b ut they might Overfull \hbox (8.22064pt too wide) in paragraph at lines 8470--8475 []\OT1/cmr/m/n/12 Instead, the first du-pli-cate in-dex of [][]\OT1/cmtt/m/n/12 I []\OT1/cmr/m/n/12 is dis-carded ([][]\OT1/cmtt/m/n/12 I [0] = 0[]\OT1/cmr/m/ n/12 , and [][]\OT1/cmtt/m/n/12 y(0)=5[]\OT1/cmr/m/n/12 ). [163] [164] [165] Overfull \hbox (10.16943pt too wide) in paragraph at lines 8588--8595 []\OT1/cmr/m/n/12 This no-ta-tion does not in-clude the de-tails of the [][]\OT 1/cmtt/m/n/12 GrB_COMP []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_REPLACE [166] Overfull \hbox (20.92456pt too wide) in paragraph at lines 8673--8720 [][] Underfull \hbox (badness 10000) in paragraph at lines 8673--8720 [167] [168] [169] [170] [171] Overfull \hbox (0.92876pt too wide) in paragraph at lines 8915--8917 []\OT1/cmr/m/n/12 The fol-low-ing guide-lines should be con-sid-ered when us-in g [][]\OT1/cmtt/m/n/12 GxB_subassign[]\OT1/cmr/m/n/12 , [172] [173] Overfull \hbox (6.09775pt too wide) in paragraph at lines 8984--8993 \OT1/cmr/m/n/12 is pro-vided as the $\OML/cmm/m/it/12 x$ \OT1/cmr/m/n/12 in-put to the bi-nary op-er-a-tor. [][]\OT1/cmtt/m/n/12 GrB_*_apply_BinaryOp2nd* [174] [175] [176] [177] [178] Overfull \hbox (1.92638pt too wide) in paragraph at lines 9251--9251 []\OT1/cmtt/m/n/10 GrB_Info GxB_select // C = accum (C, o p(A,k)) or op(A',k)[] [179] Overfull \hbox (24.15204pt too wide) in paragraph at lines 9326--9369 [][] [180] [181] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. [182] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. [183] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9490. [184] Overfull \hbox (9.00838pt too wide) in paragraph at lines 9532--9539 [][][]\OT1/cmtt/m/n/12 GrB_transpose []\OT1/cmr/m/n/12 trans-poses a ma-trix [] []\OT1/cmtt/m/n/12 A[]\OT1/cmr/m/n/12 , just like the ar-ray trans-pose [][]\OT 1/cmtt/m/n/12 T = A.' [185] Overfull \hbox (10.46268pt too wide) in paragraph at lines 9578--9584 []\OT1/cmr/m/n/12 Since the in-put ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/ n/12 is trans-posed by the de-scrip-tor, SuiteSparse:Graph- [186] Overfull \hbox (10.68494pt too wide) in paragraph at lines 9640--9642 [][][]\OT1/cmtt/m/n/12 GrB_kronecker []\OT1/cmr/m/n/12 com-putes the Kro-necker prod-uct, $[]$ Overfull \hbox (14.29266pt too wide) in paragraph at lines 9663--9666 []\OT1/cmr/m/n/12 The op-er-a-tor [][]\OT1/cmtt/m/n/12 op []\OT1/cmr/m/n/12 may be a [][]\OT1/cmtt/m/n/12 GrB_BinaryOp[]\OT1/cmr/m/n/12 , a [][]\OT1/cmtt/m/n/ 12 GrB_Monoid[]\OT1/cmr/m/n/12 , or a [][]\OT1/cmtt/m/n/12 GrB_Semiring[]\OT1/c mr/m/n/12 . [187] Overfull \hbox (59.0538pt too wide) in paragraph at lines 9678--9685 \OT1/cmr/m/n/12 such as [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractTuples[]\OT1/cmr /m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_Matrix_type[]\OT1/cmr/m/n/12 , [188] Overfull \hbox (1.52788pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 As a re-sult, the ex-act con-tent and for-mat of what is printe d is implementation- Overfull \hbox (7.41396pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 dependent, and will change from ver-sion to ver-sion of Suite-S parse:GraphBLAS. [189] Overfull \hbox (59.93402pt too wide) in paragraph at lines 9831--9833 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Type_fprint (GrB_BOOL , "boolean type", GxB_COMPLETE, f) [190] Overfull \hbox (22.884pt too wide) in paragraph at lines 9851--9854 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_UnaryOp_fprint (GrB_L NOT, "not", GxB_COMPLETE, f) Overfull \hbox (66.10902pt too wide) in paragraph at lines 9872--9875 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_BinaryOp_fprint (GrB_ PLUS_FP64, "plus", GxB_COMPLETE, f) Overfull \hbox (35.23401pt too wide) in paragraph at lines 9893--9896 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_SelectOp_fprint (GxB_ TRIL, "tril", GxB_COMPLETE, f) [191] Overfull \hbox (35.23401pt too wide) in paragraph at lines 9914--9919 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Monoid_fprint (GxB_PL US_FP64_MONOID, "plus monoid", Overfull \hbox (22.884pt too wide) in paragraph at lines 9936--9940 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Semiring_fprint (GxB_ PLUS_TIMES_FP64, "standard", Overfull \hbox (41.40901pt too wide) in paragraph at lines 9957--9960 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Descriptor_fprint (d, "descriptor", GxB_COMPLETE, f) [192] Overfull \hbox (24.38643pt too wide) in paragraph at lines 9978--9980 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Matrix_fprint (A, "my matrix", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 9998--10000 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Vector_fprint (v, "my vector", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 10017--10019 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Scalar_fprint (s, "my scalar", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints [193] [194] [195] LaTeX Warning: Citation `Davis20' on page 196 undefined on input line 10099. LaTeX Warning: Citation `Beamer:2012:DOB' on page 196 undefined on input line 1 0110. LaTeX Warning: Citation `Yang:2018:IPE' on page 196 undefined on input line 101 10. LaTeX Warning: Citation `DavisAznavehKolodziej19' on page 196 undefined on inpu t line 10119. [196] [197] [198] [199] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10294--10294 [] \OT1/cmtt/m/n/10 if (v_output == NULL) LAGRAPH_ERROR ("argument missing", GrB_NULL_POINTER) ;[] [200] LaTeX Warning: Citation `Luby86' on page 201 undefined on input line 10308. Overfull \hbox (14.24648pt too wide) in paragraph at lines 10344--10344 [] \OT1/cmtt/m/n/10 GrB_vxm (neighbor_max, candidates, NULL, maxFirst, p rob, A, r_desc) ;[] [201] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseMult (prob, candidates, NULL, set_random, d egrees, X, r_desc) ;[] Overfull \hbox (12.42628pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseAdd (new_members, NULL,NULL, GrB_GT_FP64, p rob, neighbor_max,0);[] [202] Overfull \hbox (23.03032pt too wide) in paragraph at lines 10400--10408 \OT1/cmr/m/n/12 The col-umn [][]\OT1/cmtt/m/n/12 A(:,j) []\OT1/cmr/m/n/12 is th e ad-ja-cency of node [][]\OT1/cmtt/m/n/12 j[]\OT1/cmr/m/n/12 , and the dot pro d-uct [][]\OT1/cmtt/m/n/12 prob'*A(:,j) [203] [204] [205] LaTeX Warning: Citation `Davis07' on page 206 undefined on input line 10587. LaTeX Warning: Citation `Davis07' on page 206 undefined on input line 10595. LaTeX Warning: Citation `Higham' on page 206 undefined on input line 10615. LaTeX Warning: Citation `Wathen' on page 206 undefined on input line 10617. [206] [207] Overfull \hbox (24.54538pt too wide) in paragraph at lines 10664--10671 \OT1/cmr/m/n/12 ca-tion to con-struct the tu-ple list, and is al-most as fast a s us-ing [][]\OT1/cmtt/m/n/12 GrB_Matrix_build[]\OT1/cmr/m/n/12 . Overfull \hbox (3.74657pt too wide) in paragraph at lines 10699--10699 [] \OT1/cmtt/m/n/10 GrB_Matrix_setElement (F, em (krow,kcol) , krow, kcol) ;[] [208] [209] [210] [211] LaTeX Warning: Citation `WolfBerryStark15' on page 212 undefined on input line 10900. LaTeX Warning: Citation `Burkhardt16' on page 212 undefined on input line 10902 . LaTeX Warning: Citation `AzadBulucGilbert15' on page 212 undefined on input lin e 10904. LaTeX Warning: Citation `Cohen09' on page 212 undefined on input line 10904. LaTeX Warning: Citation `WolfDeveciBerryHammondRajamanickam17' on page 212 unde fined on input line 10906. LaTeX Warning: Citation `Davis18b' on page 212 undefined on input line 10919. [212] Overfull \hbox (32.48866pt too wide) in paragraph at lines 10948--10964 [][] Underfull \hbox (badness 10000) in paragraph at lines 10948--10964 [213] Overfull \hbox (30.00606pt too wide) in paragraph at lines 10988--10988 []\OT1/cmr/bx/n/14.4 User ap-pli-ca-tions us-ing OpenMP or POSIX pthreads Overfull \hbox (4.40424pt too wide) in paragraph at lines 10992--11000 \OT1/cmr/m/n/12 Two ex-am-ple demo pro-grams are in-cluded that il-lus-trate ho w a multi-threaded [214] Overfull \hbox (69.41573pt too wide) in paragraph at lines 11050--11050 []\OT1/cmr/bx/n/17.28 Compiling and In-stalling Suite-Sparse:GraphBLAS Overfull \hbox (16.05841pt too wide) in paragraph at lines 11073--11078 [][]\OT1/cmtt/m/n/12 #pragma omp atomic write[]\OT1/cmr/bx/n/12 . The use of gc c for Suite-Sparse:GraphBLAS [215] Overfull \hbox (31.69743pt too wide) in paragraph at lines 11160--11162 []\OT1/cmr/m/n/12 Open a ter-mi-nal win-dow and type this in the [][]\OT1/cmtt/ m/n/12 SuiteSparse/GraphBLAS/build [216] Overfull \hbox (33.58942pt too wide) in paragraph at lines 11169--11172 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 cmake []\OT1/cmr/m/n/12 com-mand gen -er-ates many files in [][]\OT1/cmtt/m/n/12 SuiteSparse/GraphBLAS/build[]\OT1/c mr/m/n/12 , Overfull \hbox (32.85522pt too wide) in paragraph at lines 11169--11172 \OT1/cmr/m/n/12 and the file [][]\OT1/cmtt/m/n/12 graphblas.sln []\OT1/cmr/m/n/ 12 in par-tic-u-lar. Open the gen-er-ated [][]\OT1/cmtt/m/n/12 graphblas.sln Overfull \hbox (15.61084pt too wide) in paragraph at lines 11173--11178 [][]\OT1/cmtt/m/n/12 C/C++[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 General []\O T1/cmr/m/n/12 and change the pa-ram-e-ter [][]\OT1/cmtt/m/n/12 Multiprocessor C ompilation Overfull \hbox (46.26897pt too wide) in paragraph at lines 11179--11185 []\OT1/cmr/m/n/12 Select the [][]\OT1/cmtt/m/n/12 Build []\OT1/cmr/m/n/12 menu item at the top of the win-dow and se-lect [][]\OT1/cmtt/m/n/12 Build Solution[ ]\OT1/cmr/m/n/12 . Overfull \hbox (5.25778pt too wide) in paragraph at lines 11179--11185 [][]\OT1/cmtt/m/n/12 graphblas.dll[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 grap hblas.lib[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 graphblas.exp []\OT1/cmr/ m/n/12 files there. Please Overfull \hbox (72.643pt too wide) in paragraph at lines 11197--11200 []\OT1/cmr/m/n/12 From the top left side of the [][]\OT1/cmtt/m/n/12 System []\ OT1/cmr/m/n/12 win-dow, se-lect [][]\OT1/cmtt/m/n/12 Advanced System Settings[] \OT1/cmr/m/n/12 . Overfull \hbox (10.57393pt too wide) in paragraph at lines 11200--11203 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 Systems Properties []\OT1/cmr/m/n/12 win-dow should ap-pear with the [][]\OT1/cmtt/m/n/12 Advanced [217] Overfull \hbox (13.64095pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 If the above steps do not work, you can in-stead copy the [][ ]\OT1/cmtt/m/n/12 graphblas.* Overfull \hbox (3.27658pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 files from [][]\OT1/cmtt/m/n/12 GraphBLAS\build\Release []\OT 1/cmr/m/n/12 into any ex-ist-ing folder listed Overfull \hbox (10.70392pt too wide) in paragraph at lines 11226--11230 \OT1/cmr/m/n/12 First, com-pile the Suite-Sparse:GraphBLAS dy-namic li-brary ([ ][]\OT1/cmtt/m/n/12 libgraphblas.so Overfull \hbox (20.77408pt too wide) in paragraph at lines 11239--11242 []\OT1/cmr/m/n/12 Follow the re-main-ing in-struc-tions in the [][]\OT1/cmtt/m/ n/12 GraphBLAS/GraphBLAS/README.md [218] Overfull \hbox (21.92802pt too wide) in paragraph at lines 11270--11275 \OT1/cmr/m/n/12 You may need to add the above lines in your [][]\OT1/cmtt/m/n/1 2 Documents/MATLAB/startup.m Overfull \hbox (34.38116pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 sult, [][]\OT1/cmtt/m/n/12 GxB_ASIN_FC32[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_ASIN_FC64 []GxB_ASINH_FC32[]\OT1/cmr/m/n/12 , and [][]\OT 1/cmtt/m/n/12 GxB_ASINH_FC64 Overfull \hbox (4.84929pt too wide) in paragraph at lines 11284--11293 []\OT1/cmr/m/n/12 do not work prop-erly on Win-dows. This af-fects the [][]\OT1 /cmtt/m/n/12 GrB/asin[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB/acsc[]\OT1/cm r/m/n/12 , Overfull \hbox (99.57925pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 the MAT-LAB tests by-passed in [][]\OT1/cmtt/m/n/12 gbtest76.m []\OT1/cmr/m/n/12 for de-tails, in the [][]\OT1/cmtt/m/n/12 GraphBLAS/GraphBLAS /test Overfull \hbox (34.12076pt too wide) in paragraph at lines 11304--11315 \OT1/cmr/m/n/12 com-plete. This can be done for all ob-jects via [][]\OT1/cmtt/ m/n/12 GrB_Matrix_wait[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Vector_wait[ ]\OT1/cmr/m/n/12 , [219] Overfull \hbox (17.6559pt too wide) in paragraph at lines 11328--11335 \OT1/cmr/m/n/12 pthreads. If OpenMP is present, it uses OpenMP crit-i-cal sec-t ions for [][]\OT1/cmtt/m/n/12 GrB_wait() Overfull \hbox (0.44614pt too wide) in paragraph at lines 11362--11364 []\OT1/cmr/m/n/12 no user thread-ing: com-pile with [][]\OT1/cmtt/m/n/12 cmake -DUSER_NONE=1[]\OT1/cmr/m/n/12 . \OT1/cmr/bx/n/12 Graph-BLAS Overfull \hbox (9.50793pt too wide) in paragraph at lines 11371--11374 [][]\OT1/cmtt/m/n/12 GxB_BY_ROW []\OT1/cmr/m/n/12 for-mat. You can change the d e-fault at com-pile time to [][]\OT1/cmtt/m/n/12 GxB_BY_COL [220] Overfull \hbox (52.64896pt too wide) in paragraph at lines 11387--11387 [] \OT1/cmtt/m/n/10.95 if (s == GxB_BY_COL) printf ("all new matrices are st ored by column\n") :[] Overfull \hbox (3.09839pt too wide) in paragraph at lines 11403--11409 \OT1/cmr/m/n/12 Then do [][]\OT1/cmtt/m/n/12 make []\OT1/cmr/m/n/12 in the [][] \OT1/cmtt/m/n/12 build []\OT1/cmr/m/n/12 di-rec-tory. If this still fails, see the [][]\OT1/cmtt/m/n/12 CMakeLists.txt Overfull \hbox (0.91077pt too wide) in paragraph at lines 11426--11426 [] \OT1/cmtt/m/n/10.95 # cmake 2.8 workaround: gcc needs to be told to d o ANSI C11.[] [221] Overfull \hbox (5.06398pt too wide) in paragraph at lines 11432--11435 []\OT1/cmr/m/n/12 file, but these are meant only for code de-vel-op-ment of Sui te-Sparse:GraphBLAS Overfull \hbox (8.18504pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 both at com-pile time and then at run time with [][]\OT1/cmtt/m /n/12 GxB_set [](GxB_BURBLE, true)[]\OT1/cmr/m/n/12 , Overfull \hbox (25.41429pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 or [][]\OT1/cmtt/m/n/12 GrB.burble(1) []\OT1/cmr/m/n/12 in the MAT-LAB in-ter-face. If en-abled, Suite-Sparse:GraphBLAS [222] Overfull \hbox (1.21198pt too wide) in paragraph at lines 11480--11483 \OT1/cmr/m/n/12 To in-stall the li-brary (typ-i-cally in [][]\OT1/cmtt/m/n/12 / usr/local/lib []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 /usr/local/include [223] Overfull \hbox (0.30112pt too wide) in paragraph at lines 11543--11550 \OT1/cmss/m/n/12 redislabs . com / redis-[]enterprise / technology / redisgraph /$[][]\OT1/cmr/m/n/12 ), a graph database mod- Overfull \hbox (36.16724pt too wide) in paragraph at lines 11543--11550 [][]$\OT1/cmss/m/n/10 https : / / redislabs . com / blog / new-[]redisgraph-[]1 -[]0-[]achieves-[]600x-[]faster-[]performance-[]graph-[]databases/$[][]\OT1/cmr /m/n/12 ). [224] [225] (./GraphBLAS_UserGuide.bbl Underfull \hbox (badness 5696) in paragraph at lines 35--41 []\OT1/cmr/m/n/10.95 A. Bulu^^Xc and J. Gilbert. Par-al-lel sparse matrix-matr ix Underfull \hbox (badness 1210) in paragraph at lines 35--41 \OT1/cmr/m/n/10.95 mul-ti-pli-ca-tion and in-dex-ing: Im-ple-men-ta-tion and ex -per-i-ments. Underfull \hbox (badness 10000) in paragraph at lines 58--63 []\OT1/cmr/m/n/10.95 P. Burkhardt. Graph-ing tril-lions of tri-an- Underfull \hbox (badness 10000) in paragraph at lines 58--63 \OT1/cmr/m/n/10.95 gles. \OT1/cmr/m/it/10.95 In-for-ma-tion Vi-su-al-iza-tion\ OT1/cmr/m/n/10.95 , 16:157--166, 2016. [226] Underfull \hbox (badness 2073) in paragraph at lines 83--90 []\OT1/cmr/m/n/10 Provides a ba-sic overview of many sparse ma-trix al-go- Underfull \hbox (badness 1859) in paragraph at lines 83--90 \OT1/cmr/m/n/10 rithms and a sim-ple sparse ma-trix data struc-ture. The Underfull \hbox (badness 6380) in paragraph at lines 93--98 []\OT1/cmr/m/n/10.95 T. A Davis. Cre-at-ing sparse finite-element ma-tri-ces i n Underfull \hbox (badness 5490) in paragraph at lines 93--98 \OT1/cmr/m/n/10.95 MAT-LAB. \OT1/cmr/m/it/10.95 Loren on the Art of MAT-LAB\OT 1/cmr/m/n/10.95 , Mar. 2007. Underfull \hbox (badness 5985) in paragraph at lines 93--98 \OT1/cmr/m/n/10.95 Loren Shure, ed-i-tor. Pub-lished by The Math-Works, Nat- Underfull \hbox (badness 10000) in paragraph at lines 109--115 []\OT1/cmr/m/n/10.95 T. A. Davis. Al-go-rithm 9xx: Suite-Sparse:GraphBLAS: Underfull \hbox (badness 10000) in paragraph at lines 109--115 \OT1/cmr/m/n/10.95 graph al-go-rithms in the lan-guage of sparse lin-ear al-ge- Underfull \hbox (badness 2932) in paragraph at lines 109--115 \OT1/cmr/m/n/10.95 bra. \OT1/cmr/m/it/10.95 ACM Trans. on Math. Soft-ware\OT1/ cmr/m/n/10.95 , (to ap-pear), 2019. [227] Underfull \hbox (badness 5924) in paragraph at lines 141--147 []\OT1/cmr/m/n/10.95 F. G. Gus-tavson. Two fast al-go-rithms for sparse ma- Underfull \hbox (badness 5231) in paragraph at lines 141--147 \OT1/cmr/m/n/10.95 tri-ces: Mul-ti-pli-ca-tion and per-muted trans-po-si-tion. \OT1/cmr/m/it/10.95 ACM Underfull \hbox (badness 5924) in paragraph at lines 141--147 \OT1/cmr/m/it/10.95 Trans-ac-tions on Math-e-mat-i-cal Soft-ware\OT1/cmr/m/n/10 .95 , 4(3):250--269, 1978. Underfull \hbox (badness 4454) in paragraph at lines 158--163 []\OT1/cmr/m/n/10.95 J. Kep-ner. Graph-BLAS math-e-mat-ics. Tech-ni-cal re-po rt, Underfull \hbox (badness 4621) in paragraph at lines 158--163 \OT1/cmr/m/n/10.95 2017. [][]http://www.mit.edu/$\OMS/cmsy/m/n/10.95 ^^X$\OT1/ cmr/m/n/10.95 kepner/GraphBLAS/GraphBLAS- [228] Underfull \hbox (badness 1540) in paragraph at lines 194--199 []\OT1/cmr/m/n/10.95 M. Luby. A sim-ple par-al-lel al-go-rithm for the max-i-m al in- Underfull \hbox (badness 4341) in paragraph at lines 194--199 \OT1/cmr/m/n/10.95 de-pen-dent set prob-lem. \OT1/cmr/m/it/10.95 SIAM J. Com-p ut.\OT1/cmr/m/n/10.95 , 15(4), 1986. Underfull \hbox (badness 1226) in paragraph at lines 222--227 []\OT1/cmr/m/n/10.95 A. J. Wa-then. Re-al-is-tic eigen-value bounds for the Ga lerkin Underfull \hbox (badness 6944) in paragraph at lines 222--227 \OT1/cmr/m/n/10.95 mass ma-trix. \OT1/cmr/m/it/10.95 IMA J. Nu-mer. Anal.\OT1/ cmr/m/n/10.95 , 7:449--457, 1987. Underfull \hbox (badness 2205) in paragraph at lines 236--242 \OT1/cmr/m/n/10.95 S. Ra-ja-man-ickam. Fast lin-ear algebra-based tri-an-gle c ount- Underfull \hbox (badness 1783) in paragraph at lines 236--242 \OT1/cmr/m/it/10.95 treme Com-put-ing Con-fer-ence (HPEC)\OT1/cmr/m/n/10.95 , p ages 1--7, Sept 2017. [229]) [230] (./GraphBLAS_UserGuide.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `GraphBLAS_UserGuide.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on GraphBLAS_UserGuide.pdf (230 pages, 851825 bytes). Transcript written on GraphBLAS_UserGuide.log. pdflatex GraphBLAS_UserGuide.tex This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./GraphBLAS_UserGuide.tex LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty) (/usr/share/texlive/texmf-dist/tex/latex/mdframed/mdframed.sty (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse-generic.tex)) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/zref/zref-abspage.sty (/usr/share/texlive/texmf-dist/tex/latex/zref/zref-base.sty)) (/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/mdframed/md-frame-0.mdf)) (./GraphBLAS_version.tex) (./GraphBLAS_UserGuide.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (./GraphBLAS_UserGuide.out) (./GraphBLAS_UserGuide.out) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (./GraphBLAS_UserGuide.toc [2] [3] [4] [5] Overfull \hbox (3.4828pt too wide) in paragraph at lines 182--182 [][] [][][]\OT1/cmr/m/n/10.95 Performance of \OT1/cmss/m/n/10.95 GxB[]subassig n\OT1/cmr/m/n/10.95 , \OT1/cmss/m/n/10.95 GrB[]assign \OT1/cmr/m/n/10.95 and \O T1/cmss/m/n/10.95 GrB[]*[]setElement[][] [][] [6] [7]) [8] (./GraphBLAS_API_version.tex) [9] Overfull \hbox (9.26633pt too wide) in paragraph at lines 135--146 [][]\OT1/cmtt/m/n/12 GrB_wait(&object) []\OT1/cmr/m/n/12 or non-polymorphic [][ ]\OT1/cmtt/m/n/12 GrB_*_wait(&object) []\OT1/cmr/m/n/12 in-stead. Overfull \hbox (10.07889pt too wide) in paragraph at lines 152--155 []\OT1/cmr/m/n/12 Version 3.3.1 (June 30, 2020). Bug fix to [][]\OT1/cmtt/m/n/1 2 GrB_assign []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GxB_subassign Overfull \hbox (23.00264pt too wide) in paragraph at lines 160--173 \OT1/cmr/m/n/12 cated. Added [][]\OT1/cmtt/m/n/12 GrB_getVersion[]\OT1/cmr/m/n/ 12 , [][]\OT1/cmtt/m/n/12 GrB_Matrix_resize[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/ n/12 GrB_Vector_resize[]\OT1/cmr/m/n/12 , Overfull \hbox (28.42726pt too wide) in paragraph at lines 160--173 [][]\OT1/cmtt/m/n/12 GrB_apply[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Matr ix_removeElement[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GrB_Vector_removeE lement[]\OT1/cmr/m/n/12 . [10] [11] [12] [13] [14] Overfull \hbox (0.69284pt too wide) in paragraph at lines 356--361 []\OT1/cmr/m/it/12 Graph Al-go-rithms in the Lan-guage on Lin-ear Al-ge-bra\OT1 /cmr/m/n/12 , Kep-ner and Gilbert, [15] [16] [17] [18] [19] Overfull \hbox (8.66713pt too wide) in paragraph at lines 589--594 []\OT1/cmr/m/n/12 The Ac-cu-mu-la-tor Phase is fol-lowed by the Mask/Replace Ph ase, $[]$ Overfull \hbox (8.47243pt too wide) in paragraph at lines 665--665 [] \OT1/cmtt/m/n/10 p = C.pattern & T.pattern ; Z.matrix (p) = accum (C.mat rix (p), T.matrix (p));[] [20] [21] Package mdframed Warning: You got a bad break (mdframed) because the last box will be empty (mdframed) you have to change it manually (mdframed) by changing the text, the space (mdframed) or something else on input line 725. [22] [23] Overfull \hbox (13.20271pt too wide) in paragraph at lines 771--774 \OT1/cmr/m/n/12 ANSI C. Yet C leaves some type-cast-ing un-de-fined. Suite-Spar se:GraphBLAS [24] [25] Overfull \hbox (3.8319pt too wide) in paragraph at lines 852--852 []\OT1/cmr/bx/n/17.28 Interfaces to MAT-LAB, Python, Ju-lia, Java [26] Overfull \hbox (33.5095pt too wide) in paragraph at lines 937--940 \OT1/cmr/m/n/12 See Michel Pel-letier's Python in-ter-face at [][]https://githu b.com/michelp/pygraphblas[][]. [27] Overfull \hbox (19.49643pt too wide) in paragraph at lines 1005--1005 [] \OT1/cmtt/m/n/10 ... use features from version 1.4.0 of a specific GraphB LAS implementation[] Overfull \hbox (22.8047pt too wide) in paragraph at lines 1013--1031 [][] [28] [29] Overfull \hbox (0.80347pt too wide) in paragraph at lines 1139--1147 \OT1/cmr/m/n/12 namely: [][]\OT1/cmtt/m/n/12 GrB_*_nvals[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GrB_*_extractElement[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_*_extractTuples[]\OT1/cmr/m/n/12 , and [30] [31] (./GraphBLAS_API_version.tex) [32] Overfull \hbox (9.03737pt too wide) in paragraph at lines 1259--1264 \OT1/cmr/m/n/12 LAB) and then linked into a MAT-LAB [][]\OT1/cmtt/m/n/12 mexFun ction[]\OT1/cmr/m/n/12 . How-ever, a [][]\OT1/cmtt/m/n/12 mexFunction [33] [34] [35] [36] Overfull \hbox (7.08417pt too wide) in paragraph at lines 1439--1446 \OT1/cmr/m/n/12 Sparse:GraphBLAS adds two ad-di-tional ob-jects: a sparse scala r ([][]\OT1/cmtt/m/n/12 GxB_Scalar[]\OT1/cmr/m/n/12 ), Overfull \hbox (3.67369pt too wide) in paragraph at lines 1453--1473 [] [37] Overfull \hbox (25.98555pt too wide) in paragraph at lines 1503--1534 [] [38] [39] [40] [41] Overfull \hbox (3.28505pt too wide) in paragraph at lines 1689--1692 [][]\OT1/cmtt/m/n/12 GxB_Type_size (&s, GrB_INT32) []\OT1/cmr/m/n/12 sets [][]\ OT1/cmtt/m/n/12 s []\OT1/cmr/m/n/12 to 4, the same as [][]\OT1/cmtt/m/n/12 size of(int32_t)[]\OT1/cmr/m/n/12 . Overfull \hbox (3.59038pt too wide) in paragraph at lines 1738--1744 []\OT1/cmr/m/n/12 The func-tion sig-na-ture of [][]\OT1/cmtt/m/n/12 GrB_Type_fr ee []\OT1/cmr/m/n/12 uses the generic name [][]\OT1/cmtt/m/n/12 GrB_free[]\OT1/ cmr/m/n/12 , [42] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1747. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1747. Overfull \hbox (20.08385pt too wide) in paragraph at lines 1807--1860 [][] [43] [44] Overfull \hbox (1.92638pt too wide) in paragraph at lines 1930--1930 []\OT1/cmtt/m/n/10 GrB_Info GrB_UnaryOp_new // create a new user-def ined unary operator[] [45] Overfull \hbox (62.36047pt too wide) in paragraph at lines 1977--1983 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GrB_UnaryOp_wait(&unaryop) Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1985. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1985. [46] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2008. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2008. [47] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2062. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2062. Overfull \hbox (12.26166pt too wide) in paragraph at lines 2118--2142 [][] [48] [49] Overfull \hbox (9.19183pt too wide) in paragraph at lines 2212--2230 [][] [50] Overfull \hbox (10.58614pt too wide) in paragraph at lines 2271--2280 \OT1/cmr/m/n/12 XOR op-er-a-tors. With-out the [][]\OT1/cmtt/m/n/12 _$\OML/cmm/ m/it/12 T$ []\OT1/cmr/m/n/12 suf-fix, the three op-er-a-tors [][]\OT1/cmtt/m/n/ 12 GrB_LOR[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_LAND[]\OT1/cmr/m/n/12 , [51] Overfull \hbox (74.71048pt too wide) in paragraph at lines 2375--2381 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GrB_BinaryOp_wait(&binaryop) Overfull \hbox (23.8884pt too wide) in paragraph at lines 2375--2381 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GrB_BinaryOp_wait(&binaryop)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 binaryop Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2384. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2384. [52] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2408. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2408. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2432. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2432. [53] [54] [55] Overfull \hbox (28.54279pt too wide) in paragraph at lines 2534--2534 []\OT1/cmr/bx/n/14.4 SuiteSparse:GraphBLAS se-lect op-er-a-tors: \OT1/cmss/m/n/ 14.4 GxB[]SelectOp Overfull \hbox (8.99652pt too wide) in paragraph at lines 2560--2560 [] \OT1/cmtt/m/n/10 const void *x, // value of A(i,j), or NULL if f is type-generic[] Overfull \hbox (13.94386pt too wide) in paragraph at lines 2568--2596 [][] [56] Overfull \hbox (1.92638pt too wide) in paragraph at lines 2633--2633 [] \OT1/cmtt/m/n/10 GrB_Type ttype // type of input thunk, or N ULL if type-generic[] [57] Overfull \hbox (74.71048pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. [ ][]\OT1/cmtt/m/n/12 GxB_SelectOp_wait(&selectop) Overfull \hbox (23.8884pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GxB_SelectOp_wait(&selectop)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 selectop Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2680. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2680. [58] [59] [60] Overfull \hbox (23.23036pt too wide) in paragraph at lines 2827--2833 [][]\OT1/cmtt/m/n/12 GrB_LAND_MONOID_BOOL[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/ 12 GrB_LXOR_MONOID_BOOL[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GrB_LXNOR_M ONOID_BOOL[]\OT1/cmr/m/n/12 . [61] Overfull \hbox (0.98737pt too wide) in paragraph at lines 2918--2923 \OT1/cmr/m/n/12 ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1/cm tt/m/n/12 GrB_Monoid_wait(&monoid) [62] Overfull \hbox (7.17633pt too wide) in paragraph at lines 2940--2940 []\OT1/cmtt/m/n/10 GrB_Info GxB_Monoid_terminal_new // create a monoid that has a terminal value[] [63] [64] [65] Overfull \hbox (11.07724pt too wide) in paragraph at lines 3166--3172 \OT1/cmr/m/n/12 types: [][]\OT1/cmtt/m/n/12 PLUS_TIMES[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 PLUS_MIN[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_PLUS[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_TIMES[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m /n/12 MIN_FIRST[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN_SECOND[]\OT1/cmr/m/ n/12 , [66] Overfull \hbox (4.26732pt too wide) in paragraph at lines 3188--3194 []\OT1/cmr/m/n/12 20 mul-ti-ply op-er-a-tors ([][]\OT1/cmtt/m/n/12 FIRST[]\OT1/ cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 SECOND[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 PAIR[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MIN[]\OT1/cmr/m/n/12 , [][]\OT1/ cmtt/m/n/12 MAX[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 PLUS[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 MINUS[]\OT1/cmr/m/n/12 , [67] Overfull \hbox (38.7428pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Semiring_wait(&semiring) Overfull \hbox (23.8884pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GrB_Semiring_wait(&semiring)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 semiring [68] Overfull \hbox (7.17633pt too wide) in paragraph at lines 3307--3307 [] \OT1/cmtt/m/n/10 GrB_BinaryOp *multiply, // returns multiply oper ator of the semiring[] [69] Overfull \hbox (22.45738pt too wide) in paragraph at lines 3360--3375 [][] Underfull \hbox (badness 10000) in paragraph at lines 3360--3375 [70] [71] [72] [73] [74] Overfull \hbox (12.47293pt too wide) in paragraph at lines 3667--3671 \OT1/cmr/m/n/12 of the given type. This is anal-o-gous to MAT-LAB state-ment [] []\OT1/cmtt/m/n/12 v = sparse (n,1)[]\OT1/cmr/m/n/12 , [75] Overfull \hbox (9.02386pt too wide) in paragraph at lines 3748--3754 \OT1/cmr/m/n/12 were cre-ated fresh with [][]\OT1/cmtt/m/n/12 GrB_Vector_new[]\ OT1/cmr/m/n/12 . Anal-o-gous with [][]\OT1/cmtt/m/n/12 v (:) = sparse(0) [76] Overfull \hbox (33.82916pt too wide) in paragraph at lines 3813--3815 [][][]\OT1/cmtt/m/n/12 GxB_Vector_type []\OT1/cmr/m/n/12 re-turns the type of a vec-tor. Anal-o-gous to [][]\OT1/cmtt/m/n/12 type = class (v) [77] Overfull \hbox (5.42024pt too wide) in paragraph at lines 3871--3876 \OT1/cmr/m/n/12 op-er-a-tion is ex-actly like set-ting a sin-gle en-try in an [ ][]\OT1/cmtt/m/n/12 n[]\OT1/cmr/m/n/12 -by-1 ma-trix, [][]\OT1/cmtt/m/n/12 A(i, 0) = x[]\OT1/cmr/m/n/12 , Overfull \hbox (22.40071pt too wide) in paragraph at lines 3893--3902 [][][]\OT1/cmtt/m/n/12 GrB_Vector_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a vec-tor, [][]\OT1/cmtt/m/n/12 x = v(i)[]\OT1/cmr/m/n/12 . [78] [79] [80] Overfull \hbox (24.5408pt too wide) in paragraph at lines 4002--4040 [][] [81] [82] Overfull \hbox (21.21309pt too wide) in paragraph at lines 4164--4166 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows []\OT1/cmr/m/n/12 re-turns the num-ber of rows of a ma-trix ([][]\OT1/cmtt/m/n/12 nrows=size(A,1) Overfull \hbox (39.81706pt too wide) in paragraph at lines 4184--4186 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_ncols []\OT1/cmr/m/n/12 re-turns the num-ber of columns of a ma-trix ([][]\OT1/cmtt/m/n/12 ncols=size(A,2) [83] [84] [85] [86] Overfull \hbox (11.6521pt too wide) in paragraph at lines 4389--4402 [][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G xB_Matrix_type[]\OT1/cmr/m/n/12 , and of course [][]\OT1/cmtt/m/n/12 GrB_Matrix _setElement [87] Overfull \hbox (21.81322pt too wide) in paragraph at lines 4424--4426 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a ma-trix [][]\OT1/cmtt/m/n/12 x=A(i,j)[]\OT1/cmr/m/n/12 . [88] Overfull \hbox (39.24196pt too wide) in paragraph at lines 4508--4517 []\OT1/cmr/m/n/12 The num-ber of tu-ples in the ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/n/12 is given by [][]\OT1/cmtt/m/n/12 GrB_Matrix_nvals(&anvals,A)[ ]\OT1/cmr/m/n/12 . [89] [90] Overfull \hbox (6.42572pt too wide) in paragraph at lines 4571--4575 \OT1/cmr/m/n/12 The im-port/export func-tions al-low the user ap-pli-ca-tion to cre-ate a [][]\OT1/cmtt/m/n/12 GrB_Matrix Overfull \hbox (3.48825pt too wide) in paragraph at lines 4585--4589 []\OT1/cmr/m/n/12 incorporate them into its in-ter-nal data struc-ture for the new [][]\OT1/cmtt/m/n/12 GrB_Matrix [91] [92] Overfull \hbox (2.4533pt too wide) in paragraph at lines 4704--4707 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GxB_Vector_import []\OT1/cmr/m/n/12 func-tion is a fast way to con-struct a [][]\OT1/cmtt/m/n/12 GrB_Vector[]\OT1/c mr/m/n/12 , Overfull \hbox (8.99652pt too wide) in paragraph at lines 4720--4720 [] \OT1/cmtt/m/n/10 GxB_Matrix_import_CSC (&A, type, n, 1, nvals, -1, &Ap, & vi, &vx, desc) ;[] [93] [94] [95] Overfull \hbox (19.49643pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 2, 5, 7, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Aj [ ] = { 0, 2, 0, 1, 3, 1, 2, 0, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.2, 3.1, 2.9, 0.9, 1.7, 3.0, 3. 5, 0.4, 1.0 } ;[] [96] [97] Overfull \hbox (19.49643pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 3, 6, 8, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ai [ ] = { 0, 1, 3, 1, 2, 3, 0, 2, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.1, 3.5, 2.9, 1.7, 0.4, 3.2, 3. 0, 0.9, 1.0 } ;[] Overfull \hbox (1.55626pt too wide) in paragraph at lines 5033--5036 []\OT1/cmr/m/n/12 That is, the row in-dices of col-umn 1 (the sec-ond col-umn) are in [][]\OT1/cmtt/m/n/12 Ai [3..5][]\OT1/cmr/m/n/12 , [98] [99] [100] [101] Overfull \hbox (1.92638pt too wide) in paragraph at lines 5212--5212 [] \OT1/cmtt/m/n/10 int64_t nonempty, // number of columns in Ah with at least one entry,[] [102] [103] [104] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5385--5385 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSR // export and free a hy persparse CSR matrix[] [105] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5446--5446 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSC // export and free a hy persparse CSC matrix[] [106] [107] [108] Overfull \hbox (5.91904pt too wide) in paragraph at lines 5616--5622 []\OT1/cmr/m/n/12 Vectors and scalars are never trans-posed via the de-scrip-to r. If a method's Overfull \hbox (4.20209pt too wide) in paragraph at lines 5616--5622 [][]\OT1/cmtt/m/n/12 desc [GrB_INP0] []\OT1/cmr/m/n/12 mod-i-fies the ma-trix p a-ram-e-ter and [][]\OT1/cmtt/m/n/12 desc [GrB_INP1] Overfull \hbox (22.34908pt too wide) in paragraph at lines 5636--5640 [][][]\OT1/cmtt/m/n/12 GxB_AxB_SAXPY[]\OT1/cmr/m/n/12 : se-lect any saxpy-based method: [][]\OT1/cmtt/m/n/12 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , [109] Overfull \hbox (6.3625pt too wide) in paragraph at lines 5657--5660 \OT1/cmr/m/n/12 ef-fi-cient for hy-per-sparse ma-tri-ces, matrix-vector-multipl y, and when [110] Overfull \hbox (7.86778pt too wide) in paragraph at lines 5719--5724 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Descriptor_wait(&d) Overfull \hbox (17.0722pt too wide) in paragraph at lines 5742--5751 [][][]\OT1/cmtt/m/n/12 GrB_Descriptor_set []\OT1/cmr/m/n/12 sets a de-scrip-tor field ([][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G rB_MASK[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , Overfull \hbox (6.71817pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_Ax B_METHOD[]\OT1/cmr/m/n/12 ) to a par-tic-u-lar value ([][]\OT1/cmtt/m/n/12 GxB_ DEFAULT[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_COMP[]\OT1/cmr/m/n/12 , Overfull \hbox (75.18883pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_ COMP+GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_TRAN[]\OT1/cmr/m /n/12 , [][]\OT1/cmtt/m/n/12 GrB_REPLACE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , Underfull \hbox (badness 2020) in paragraph at lines 5765--5769 [][][]\OT1/cmtt/m/n/10.95 GrB_REPLACE[]\OT1/cmr/m/n/10.95 : Af-ter com-put-ing Underfull \hbox (badness 2922) in paragraph at lines 5765--5769 []$\OT1/cmr/m/n/10.95 , the out-put \OT1/cmr/bx/n/10.95 C \OT1/cmr/m/n/10.95 is Underfull \hbox (badness 2035) in paragraph at lines 5765--5769 \OT1/cmr/m/n/10.95 cleared of all en-tries. Then Underfull \hbox (badness 4981) in paragraph at lines 5777--5781 \OT1/cmr/m/n/10.95 op-er-a-tion, while [][]\OT1/cmtt/m/n/10.95 Mask(i,j)=1 Underfull \hbox (badness 1540) in paragraph at lines 5782--5787 [][][]\OT1/cmtt/m/n/10.95 GrB_STRUCTURE[]\OT1/cmr/m/n/10.95 : The val-ues of Underfull \hbox (badness 5667) in paragraph at lines 5782--5787 \OT1/cmr/m/n/10.95 the Mask are ig-nored. If Underfull \hbox (badness 1178) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 Mask(i,j) []\OT1/cmr/m/n/10.95 is an en-try in the Underfull \hbox (badness 4872) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 GrB_COMP []\OT1/cmr/m/n/10.95 and [][]\OT1/cmtt/m/n/10. 95 GrB_STRUCTURE Underfull \hbox (badness 3838) in paragraph at lines 5793--5796 [][][]\OT1/cmtt/m/n/10.95 GrB_TRAN[]\OT1/cmr/m/n/10.95 : The first in-put is Underfull \hbox (badness 6252) in paragraph at lines 5811--5813 \OT1/cmr/m/n/10.95 method is used to com-pute Overfull \hbox (58.92297pt too wide) in paragraph at lines 5753--5817 [] Underfull \hbox (badness 10000) in paragraph at lines 5753--5817 [111] [112] [113] Overfull \hbox (28.49763pt too wide) in paragraph at lines 5913--5961 [] [114] Overfull \hbox (14.24648pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 H = G ; // valid; creates a 2nd handle o f the same object[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 GrB_free (&G) ; // valid; G is freed and set to NULL; H now undefined[] [115] [116] [117] Overfull \hbox (0.7007pt too wide) in paragraph at lines 6117--6125 []\OT1/cmr/m/n/12 SuiteSparse:GraphBLAS in-cludes two type-generic meth-ods, [] []\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/n/12 and Overfull \hbox (12.98712pt too wide) in paragraph at lines 6136--6141 [][][]\OT1/cmtt/m/n/12 GxB_set (GrB_Matrix A, field, value) []\OT1/cmr/m/n/12 p ro-vides hints to Suite-Sparse: Overfull \hbox (1.08037pt too wide) in paragraph at lines 6156--6158 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Matrix A, field, &value) []\OT1/cmr/m/n/12 re-trieves the cur-rent value Overfull \hbox (4.81274pt too wide) in paragraph at lines 6159--6161 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Descriptor desc, field, &value) []\OT1/cmr/ m/n/12 re-trieves the value [118] Overfull \hbox (4.50215pt too wide) in paragraph at lines 6218--6221 \OT1/cmr/m/n/12 The de-fault for [][]\OT1/cmtt/m/n/12 nthreads_max []\OT1/cmr/m /n/12 is the re-turn value from [][]\OT1/cmtt/m/n/12 omp_get_max_threads[]\OT1/ cmr/m/n/12 , [119] [120] Overfull \hbox (11.60793pt too wide) in paragraph at lines 6269--6276 \OT1/cmr/m/n/12 Graph-BLAS API Spec-i-fi-ca-tion, where the breadth-first searc h [][]\OT1/cmtt/m/n/12 BFS []\OT1/cmr/m/n/12 uses [][]\OT1/cmtt/m/n/12 GrB_vxm Overfull \hbox (14.33583pt too wide) in paragraph at lines 6294--6299 \OT1/cmr/m/n/12 can be com-piled with [][]\OT1/cmtt/m/n/12 -DBYCOL[]\OT1/cmr/m/ n/12 , which changes the de-fault for-mat to [][]\OT1/cmtt/m/n/12 GxB_BY_COL[]\ OT1/cmr/m/n/12 , [121] Overfull \hbox (3.22508pt too wide) in paragraph at lines 6347--6351 []\OT1/cmr/m/n/12 If a ma-trix is cur-rently hy-per-sparse, it can be con-verte d to non-hypersparse [122] Overfull \hbox (18.1564pt too wide) in paragraph at lines 6376--6381 [][]\OT1/cmtt/m/n/12 GxB_BY_COL []\OT1/cmr/m/n/12 for-mat, as de-ter-mined by t he last call to [][]\OT1/cmtt/m/n/12 GxB_set(GxB_FORMAT,...) Overfull \hbox (3.83885pt too wide) in paragraph at lines 6386--6391 \OT1/cmr/m/n/12 type of the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 pa-ram -e-ter for the sec-ond ar-gu-ment of [][]\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/ n/12 and [][]\OT1/cmtt/m/n/12 GxB_get[]\OT1/cmr/m/n/12 , Overfull \hbox (19.49643pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_HYPER = 0, // defines switch to hypersparse for mat (double value)[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_FORMAT = 1, // defines CSR/CSC format: GxB_BY_RO W or GxB_BY_COL[] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_MODE = 2, // mode passed to GrB_init (blocking or non-blocking)[] [123] [124] [125] Overfull \hbox (19.69768pt too wide) in paragraph at lines 6531--6535 \OT1/cmr/m/n/12 This is de-ter-mined dur-ing in-stal-la-tion (see Sec-tion [][] 12.4[][]). Since [][]\OT1/cmtt/m/n/12 GxB_THREAD_NONE Overfull \hbox (14.24648pt too wide) in paragraph at lines 6567--6567 [] \OT1/cmtt/m/n/10 printf ("GraphBLAS is multi-threaded, internally, us ing OpenMP.\n") ;[] [126] [127] Overfull \hbox (44.81151pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 con-sis-tent with the other us-ages of this generic func-tion. Un-like [][]\OT1/cmtt/m/n/12 GrB_Descriptor_set[]\OT1/cmr/m/n/12 , Overfull \hbox (49.57497pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 may also be [] []\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_ CHUNK[]\OT1/cmr/m/n/12 . Re-fer to Sec-tions [][]5.11.3[][] and [][]5.11.4[][] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (s == GxB_BY_COL) printf ("all new matrices are store d by column\n") :[] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (mode == GrB_BLOCKING) printf ("GrB_init(GrB_BLOCKING ) was called.\n") :[] [128] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is currently %shypersparse\n", is_hype r ? "not " : " ") ;[] Overfull \hbox (19.49643pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is stored by %s\n", (s == GxB_BY_COL) ? "col" : "row") ;[] Overfull \hbox (1.31094pt too wide) in paragraph at lines 6762--6767 [][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_MASK[ ]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , [][]\OT1/cm tt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_AxB_METHOD[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , [129] [130] [131] Overfull \hbox (2.24268pt too wide) in paragraph at lines 6872--6879 \OT1/cmr/m/n/12 MATLAB uses a colon no-ta-tion to in-dex into ma-tri-ces, such as [][]\OT1/cmtt/m/n/12 C=A(2:4,3:8)[]\OT1/cmr/m/n/12 , [132] Overfull \hbox (5.33707pt too wide) in paragraph at lines 6932--6935 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GrB_extract[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 GrB_assign[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GxB_suba ssign []\OT1/cmr/m/n/12 op-er-a-tions (de-scribed Overfull \hbox (6.98373pt too wide) in paragraph at lines 6967--6974 \OT1/cmr/m/n/12 the spe-cial value [][]\OT1/cmtt/m/n/12 ni = GxB_RANGE[]\OT1/cm r/m/n/12 . The be-gin-ning in-dex is [][]\OT1/cmtt/m/n/12 I[GxB_BEGIN] [133] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7011--7011 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i <= I [GxB_END] ; i + = I [GxB_INC])[] [134] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7057--7057 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i >= I [GxB_END] ; i - = I [GxB_INC])[] [135] [136] Overfull \hbox (24.74638pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.matrix (:,:) = identity ; % the identity of th e semiring's monoid[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.class = multiply.ztype ; % the ztype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 A = cast (A.matrix, multiply.xtype) ; % the xtype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 B = cast (B.matrix, multiply.ytype) ; % the ytype of the s emiring's multiply op[] [137] [138] Overfull \hbox (16.83702pt too wide) in paragraph at lines 7267--7271 [][]\OT1/cmtt/m/n/12 GrB_vxm []\OT1/cmr/m/n/12 in-stead of [][]\OT1/cmtt/m/n/12 GrB_mxv[]\OT1/cmr/m/n/12 , since the de-fault for-mat in Suite-Sparse:GraphBLA S [139] [140] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7335--7340 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 $ \OT1/cmr/m/n/12 de-note the bi-nary op-er-a-tor to be used. The com-pu-ta-tio n $[]$ [141] [142] [143] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7476--7486 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 ^^H$ \OT1/cmr/m/n/12 de-note the bi-nar y op-er-a-tor to be used. The com-pu-ta-tion $[]$ [144] [145] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = A.pattern & ~B.pattern ; T.matrix (p) = cast (A.mat rix (p), add.ztype) ;[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = ~A.pattern & B.pattern ; T.matrix (p) = cast (B.mat rix (p), add.ztype) ;[] [146] [147] [148] Overfull \hbox (28.4599pt too wide) in paragraph at lines 7752--7759 [][][]\OT1/cmtt/m/n/12 GrB_Col_extract []\OT1/cmr/m/n/12 ex-tracts a sub-vec-to r from a ma-trix, iden-ti-cal to [][]\OT1/cmtt/m/n/12 t = A (I,j) [149] [150] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7845--7845 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] Overfull \hbox (14.08577pt too wide) in paragraph at lines 7854--7865 [][] Overfull \hbox (16.61003pt too wide) in paragraph at lines 7882--7886 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, [][]\OT1/cmtt/m/n/12 GxB_Matrix _subassign[]\OT1/cmr/m/n/12 , the sub-ma-trix [][]\OT1/cmtt/m/n/12 C(I,J) [151] Overfull \hbox (11.08006pt too wide) in paragraph at lines 7903--7907 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, $[]$ is com-puted, where [152] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7964--7964 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(I ,j), unused if NULL[] Overfull \hbox (17.08905pt too wide) in paragraph at lines 7966--7974 \OT1/cmr/m/n/12 col-umn in-dex (and thus [][]\OT1/cmtt/m/n/12 nj=1[]\OT1/cmr/m/ n/12 ), and where all ma-tri-ces in [][]\OT1/cmtt/m/n/12 GxB_Matrix_subassign Overfull \hbox (1.92638pt too wide) in paragraph at lines 8001--8001 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,J), unused if NULL[] [153] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. [154] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Overfull \hbox (1.92638pt too wide) in paragraph at lines 8067--8067 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] [155] [156] [157] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8229--8229 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(: ,j), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8243--8246 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [158] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8267--8267 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,:), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8281--8284 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [159] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8319. [160] [161] Overfull \hbox (30.07368pt too wide) in paragraph at lines 8384--8391 \OT1/cmr/m/n/12 as-sign-ment op-er-a-tions ([][]\OT1/cmtt/m/n/12 GrB_Matrix_ass ign_TYPE []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_Matrix_assign_TYPE[]\OT 1/cmr/m/n/12 ) Overfull \hbox (35.4029pt too wide) in paragraph at lines 8420--8420 [] \OT1/cmtt/m/n/10.95 % submatrix assignment with pre-sort of I and J; and remove duplicates[] [162] Overfull \hbox (5.09454pt too wide) in paragraph at lines 8436--8441 []\OT1/cmr/m/n/12 Results are al-ways well-defined in Suite-Sparse:GraphBLAS, b ut they might Overfull \hbox (8.22064pt too wide) in paragraph at lines 8470--8475 []\OT1/cmr/m/n/12 Instead, the first du-pli-cate in-dex of [][]\OT1/cmtt/m/n/12 I []\OT1/cmr/m/n/12 is dis-carded ([][]\OT1/cmtt/m/n/12 I [0] = 0[]\OT1/cmr/m/ n/12 , and [][]\OT1/cmtt/m/n/12 y(0)=5[]\OT1/cmr/m/n/12 ). [163] [164] [165] Overfull \hbox (10.16943pt too wide) in paragraph at lines 8588--8595 []\OT1/cmr/m/n/12 This no-ta-tion does not in-clude the de-tails of the [][]\OT 1/cmtt/m/n/12 GrB_COMP []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_REPLACE [166] Overfull \hbox (20.92456pt too wide) in paragraph at lines 8673--8720 [][] Underfull \hbox (badness 10000) in paragraph at lines 8673--8720 [167] [168] [169] [170] [171] Overfull \hbox (0.92876pt too wide) in paragraph at lines 8915--8917 []\OT1/cmr/m/n/12 The fol-low-ing guide-lines should be con-sid-ered when us-in g [][]\OT1/cmtt/m/n/12 GxB_subassign[]\OT1/cmr/m/n/12 , [172] [173] Overfull \hbox (6.09775pt too wide) in paragraph at lines 8984--8993 \OT1/cmr/m/n/12 is pro-vided as the $\OML/cmm/m/it/12 x$ \OT1/cmr/m/n/12 in-put to the bi-nary op-er-a-tor. [][]\OT1/cmtt/m/n/12 GrB_*_apply_BinaryOp2nd* [174] [175] [176] [177] [178] Overfull \hbox (1.92638pt too wide) in paragraph at lines 9251--9251 []\OT1/cmtt/m/n/10 GrB_Info GxB_select // C = accum (C, o p(A,k)) or op(A',k)[] [179] Overfull \hbox (24.15204pt too wide) in paragraph at lines 9326--9369 [][] [180] [181] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. [182] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. 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[184] Overfull \hbox (9.00838pt too wide) in paragraph at lines 9532--9539 [][][]\OT1/cmtt/m/n/12 GrB_transpose []\OT1/cmr/m/n/12 trans-poses a ma-trix [] []\OT1/cmtt/m/n/12 A[]\OT1/cmr/m/n/12 , just like the ar-ray trans-pose [][]\OT 1/cmtt/m/n/12 T = A.' [185] Overfull \hbox (10.46268pt too wide) in paragraph at lines 9578--9584 []\OT1/cmr/m/n/12 Since the in-put ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/ n/12 is trans-posed by the de-scrip-tor, SuiteSparse:Graph- [186] Overfull \hbox (10.68494pt too wide) in paragraph at lines 9640--9642 [][][]\OT1/cmtt/m/n/12 GrB_kronecker []\OT1/cmr/m/n/12 com-putes the Kro-necker prod-uct, $[]$ Overfull \hbox (14.29266pt too wide) in paragraph at lines 9663--9666 []\OT1/cmr/m/n/12 The op-er-a-tor [][]\OT1/cmtt/m/n/12 op []\OT1/cmr/m/n/12 may be a [][]\OT1/cmtt/m/n/12 GrB_BinaryOp[]\OT1/cmr/m/n/12 , a [][]\OT1/cmtt/m/n/ 12 GrB_Monoid[]\OT1/cmr/m/n/12 , or a [][]\OT1/cmtt/m/n/12 GrB_Semiring[]\OT1/c mr/m/n/12 . [187] Overfull \hbox (59.0538pt too wide) in paragraph at lines 9678--9685 \OT1/cmr/m/n/12 such as [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractTuples[]\OT1/cmr /m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_Matrix_type[]\OT1/cmr/m/n/12 , [188] Overfull \hbox (1.52788pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 As a re-sult, the ex-act con-tent and for-mat of what is printe d is implementation- Overfull \hbox (7.41396pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 dependent, and will change from ver-sion to ver-sion of Suite-S parse:GraphBLAS. [189] Overfull \hbox (59.93402pt too wide) in paragraph at lines 9831--9833 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Type_fprint (GrB_BOOL , "boolean type", GxB_COMPLETE, f) [190] Overfull \hbox (22.884pt too wide) in paragraph at lines 9851--9854 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_UnaryOp_fprint (GrB_L NOT, "not", GxB_COMPLETE, f) Overfull \hbox (66.10902pt too wide) in paragraph at lines 9872--9875 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_BinaryOp_fprint (GrB_ PLUS_FP64, "plus", GxB_COMPLETE, f) Overfull \hbox (35.23401pt too wide) in paragraph at lines 9893--9896 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_SelectOp_fprint (GxB_ TRIL, "tril", GxB_COMPLETE, f) [191] Overfull \hbox (35.23401pt too wide) in paragraph at lines 9914--9919 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Monoid_fprint (GxB_PL US_FP64_MONOID, "plus monoid", Overfull \hbox (22.884pt too wide) in paragraph at lines 9936--9940 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Semiring_fprint (GxB_ PLUS_TIMES_FP64, "standard", Overfull \hbox (41.40901pt too wide) in paragraph at lines 9957--9960 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Descriptor_fprint (d, "descriptor", GxB_COMPLETE, f) [192] Overfull \hbox (24.38643pt too wide) in paragraph at lines 9978--9980 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Matrix_fprint (A, "my matrix", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 9998--10000 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Vector_fprint (v, "my vector", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 10017--10019 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Scalar_fprint (s, "my scalar", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints [193] [194] [195] [196] [197] [198] [199] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10294--10294 [] \OT1/cmtt/m/n/10 if (v_output == NULL) LAGRAPH_ERROR ("argument missing", GrB_NULL_POINTER) ;[] [200] Overfull \hbox (14.24648pt too wide) in paragraph at lines 10344--10344 [] \OT1/cmtt/m/n/10 GrB_vxm (neighbor_max, candidates, NULL, maxFirst, p rob, A, r_desc) ;[] [201] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseMult (prob, candidates, NULL, set_random, d egrees, X, r_desc) ;[] Overfull \hbox (12.42628pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseAdd (new_members, NULL,NULL, GrB_GT_FP64, p rob, neighbor_max,0);[] [202] Overfull \hbox (23.03032pt too wide) in paragraph at lines 10400--10408 \OT1/cmr/m/n/12 The col-umn [][]\OT1/cmtt/m/n/12 A(:,j) []\OT1/cmr/m/n/12 is th e ad-ja-cency of node [][]\OT1/cmtt/m/n/12 j[]\OT1/cmr/m/n/12 , and the dot pro d-uct [][]\OT1/cmtt/m/n/12 prob'*A(:,j) [203] [204] [205] [206] [207] Overfull \hbox (24.54538pt too wide) in paragraph at lines 10664--10671 \OT1/cmr/m/n/12 ca-tion to con-struct the tu-ple list, and is al-most as fast a s us-ing [][]\OT1/cmtt/m/n/12 GrB_Matrix_build[]\OT1/cmr/m/n/12 . Overfull \hbox (3.74657pt too wide) in paragraph at lines 10699--10699 [] \OT1/cmtt/m/n/10 GrB_Matrix_setElement (F, em (krow,kcol) , krow, kcol) ;[] [208] [209] [210] [211] [212] Overfull \hbox (32.48866pt too wide) in paragraph at lines 10948--10964 [][] Underfull \hbox (badness 10000) in paragraph at lines 10948--10964 [213] Overfull \hbox (30.00606pt too wide) in paragraph at lines 10988--10988 []\OT1/cmr/bx/n/14.4 User ap-pli-ca-tions us-ing OpenMP or POSIX pthreads Overfull \hbox (4.40424pt too wide) in paragraph at lines 10992--11000 \OT1/cmr/m/n/12 Two ex-am-ple demo pro-grams are in-cluded that il-lus-trate ho w a multi-threaded [214] Overfull \hbox (69.41573pt too wide) in paragraph at lines 11050--11050 []\OT1/cmr/bx/n/17.28 Compiling and In-stalling Suite-Sparse:GraphBLAS Overfull \hbox (16.05841pt too wide) in paragraph at lines 11073--11078 [][]\OT1/cmtt/m/n/12 #pragma omp atomic write[]\OT1/cmr/bx/n/12 . The use of gc c for Suite-Sparse:GraphBLAS [215] Overfull \hbox (31.69743pt too wide) in paragraph at lines 11160--11162 []\OT1/cmr/m/n/12 Open a ter-mi-nal win-dow and type this in the [][]\OT1/cmtt/ m/n/12 SuiteSparse/GraphBLAS/build [216] Overfull \hbox (33.58942pt too wide) in paragraph at lines 11169--11172 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 cmake []\OT1/cmr/m/n/12 com-mand gen -er-ates many files in [][]\OT1/cmtt/m/n/12 SuiteSparse/GraphBLAS/build[]\OT1/c mr/m/n/12 , Overfull \hbox (32.85522pt too wide) in paragraph at lines 11169--11172 \OT1/cmr/m/n/12 and the file [][]\OT1/cmtt/m/n/12 graphblas.sln []\OT1/cmr/m/n/ 12 in par-tic-u-lar. Open the gen-er-ated [][]\OT1/cmtt/m/n/12 graphblas.sln Overfull \hbox (15.61084pt too wide) in paragraph at lines 11173--11178 [][]\OT1/cmtt/m/n/12 C/C++[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 General []\O T1/cmr/m/n/12 and change the pa-ram-e-ter [][]\OT1/cmtt/m/n/12 Multiprocessor C ompilation Overfull \hbox (46.26897pt too wide) in paragraph at lines 11179--11185 []\OT1/cmr/m/n/12 Select the [][]\OT1/cmtt/m/n/12 Build []\OT1/cmr/m/n/12 menu item at the top of the win-dow and se-lect [][]\OT1/cmtt/m/n/12 Build Solution[ ]\OT1/cmr/m/n/12 . Overfull \hbox (5.25778pt too wide) in paragraph at lines 11179--11185 [][]\OT1/cmtt/m/n/12 graphblas.dll[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 grap hblas.lib[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 graphblas.exp []\OT1/cmr/ m/n/12 files there. Please Overfull \hbox (72.643pt too wide) in paragraph at lines 11197--11200 []\OT1/cmr/m/n/12 From the top left side of the [][]\OT1/cmtt/m/n/12 System []\ OT1/cmr/m/n/12 win-dow, se-lect [][]\OT1/cmtt/m/n/12 Advanced System Settings[] \OT1/cmr/m/n/12 . Overfull \hbox (10.57393pt too wide) in paragraph at lines 11200--11203 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 Systems Properties []\OT1/cmr/m/n/12 win-dow should ap-pear with the [][]\OT1/cmtt/m/n/12 Advanced [217] Overfull \hbox (13.64095pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 If the above steps do not work, you can in-stead copy the [][ ]\OT1/cmtt/m/n/12 graphblas.* Overfull \hbox (3.27658pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 files from [][]\OT1/cmtt/m/n/12 GraphBLAS\build\Release []\OT 1/cmr/m/n/12 into any ex-ist-ing folder listed Overfull \hbox (10.70392pt too wide) in paragraph at lines 11226--11230 \OT1/cmr/m/n/12 First, com-pile the Suite-Sparse:GraphBLAS dy-namic li-brary ([ ][]\OT1/cmtt/m/n/12 libgraphblas.so Overfull \hbox (20.77408pt too wide) in paragraph at lines 11239--11242 []\OT1/cmr/m/n/12 Follow the re-main-ing in-struc-tions in the [][]\OT1/cmtt/m/ n/12 GraphBLAS/GraphBLAS/README.md [218] Overfull \hbox (21.92802pt too wide) in paragraph at lines 11270--11275 \OT1/cmr/m/n/12 You may need to add the above lines in your [][]\OT1/cmtt/m/n/1 2 Documents/MATLAB/startup.m Overfull \hbox (34.38116pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 sult, [][]\OT1/cmtt/m/n/12 GxB_ASIN_FC32[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_ASIN_FC64 []GxB_ASINH_FC32[]\OT1/cmr/m/n/12 , and [][]\OT 1/cmtt/m/n/12 GxB_ASINH_FC64 Overfull \hbox (4.84929pt too wide) in paragraph at lines 11284--11293 []\OT1/cmr/m/n/12 do not work prop-erly on Win-dows. This af-fects the [][]\OT1 /cmtt/m/n/12 GrB/asin[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB/acsc[]\OT1/cm r/m/n/12 , Overfull \hbox (99.57925pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 the MAT-LAB tests by-passed in [][]\OT1/cmtt/m/n/12 gbtest76.m []\OT1/cmr/m/n/12 for de-tails, in the [][]\OT1/cmtt/m/n/12 GraphBLAS/GraphBLAS /test Overfull \hbox (34.12076pt too wide) in paragraph at lines 11304--11315 \OT1/cmr/m/n/12 com-plete. This can be done for all ob-jects via [][]\OT1/cmtt/ m/n/12 GrB_Matrix_wait[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Vector_wait[ ]\OT1/cmr/m/n/12 , [219] Overfull \hbox (17.6559pt too wide) in paragraph at lines 11328--11335 \OT1/cmr/m/n/12 pthreads. If OpenMP is present, it uses OpenMP crit-i-cal sec-t ions for [][]\OT1/cmtt/m/n/12 GrB_wait() Overfull \hbox (0.44614pt too wide) in paragraph at lines 11362--11364 []\OT1/cmr/m/n/12 no user thread-ing: com-pile with [][]\OT1/cmtt/m/n/12 cmake -DUSER_NONE=1[]\OT1/cmr/m/n/12 . \OT1/cmr/bx/n/12 Graph-BLAS Overfull \hbox (9.50793pt too wide) in paragraph at lines 11371--11374 [][]\OT1/cmtt/m/n/12 GxB_BY_ROW []\OT1/cmr/m/n/12 for-mat. You can change the d e-fault at com-pile time to [][]\OT1/cmtt/m/n/12 GxB_BY_COL [220] Overfull \hbox (52.64896pt too wide) in paragraph at lines 11387--11387 [] \OT1/cmtt/m/n/10.95 if (s == GxB_BY_COL) printf ("all new matrices are st ored by column\n") :[] Overfull \hbox (3.09839pt too wide) in paragraph at lines 11403--11409 \OT1/cmr/m/n/12 Then do [][]\OT1/cmtt/m/n/12 make []\OT1/cmr/m/n/12 in the [][] \OT1/cmtt/m/n/12 build []\OT1/cmr/m/n/12 di-rec-tory. If this still fails, see the [][]\OT1/cmtt/m/n/12 CMakeLists.txt Overfull \hbox (0.91077pt too wide) in paragraph at lines 11426--11426 [] \OT1/cmtt/m/n/10.95 # cmake 2.8 workaround: gcc needs to be told to d o ANSI C11.[] [221] Overfull \hbox (5.06398pt too wide) in paragraph at lines 11432--11435 []\OT1/cmr/m/n/12 file, but these are meant only for code de-vel-op-ment of Sui te-Sparse:GraphBLAS Overfull \hbox (8.18504pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 both at com-pile time and then at run time with [][]\OT1/cmtt/m /n/12 GxB_set [](GxB_BURBLE, true)[]\OT1/cmr/m/n/12 , Overfull \hbox (25.41429pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 or [][]\OT1/cmtt/m/n/12 GrB.burble(1) []\OT1/cmr/m/n/12 in the MAT-LAB in-ter-face. If en-abled, Suite-Sparse:GraphBLAS [222] Overfull \hbox (1.21198pt too wide) in paragraph at lines 11480--11483 \OT1/cmr/m/n/12 To in-stall the li-brary (typ-i-cally in [][]\OT1/cmtt/m/n/12 / usr/local/lib []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 /usr/local/include [223] Overfull \hbox (0.30112pt too wide) in paragraph at lines 11543--11550 \OT1/cmss/m/n/12 redislabs . com / redis-[]enterprise / technology / redisgraph /$[][]\OT1/cmr/m/n/12 ), a graph database mod- Overfull \hbox (36.16724pt too wide) in paragraph at lines 11543--11550 [][]$\OT1/cmss/m/n/10 https : / / redislabs . com / blog / new-[]redisgraph-[]1 -[]0-[]achieves-[]600x-[]faster-[]performance-[]graph-[]databases/$[][]\OT1/cmr /m/n/12 ). [224] [225] (./GraphBLAS_UserGuide.bbl Underfull \hbox (badness 5696) in paragraph at lines 35--41 []\OT1/cmr/m/n/10.95 A. Bulu^^Xc and J. Gilbert. Par-al-lel sparse matrix-matr ix Underfull \hbox (badness 1210) in paragraph at lines 35--41 \OT1/cmr/m/n/10.95 mul-ti-pli-ca-tion and in-dex-ing: Im-ple-men-ta-tion and ex -per-i-ments. Underfull \hbox (badness 10000) in paragraph at lines 58--63 []\OT1/cmr/m/n/10.95 P. Burkhardt. Graph-ing tril-lions of tri-an- Underfull \hbox (badness 10000) in paragraph at lines 58--63 \OT1/cmr/m/n/10.95 gles. \OT1/cmr/m/it/10.95 In-for-ma-tion Vi-su-al-iza-tion\ OT1/cmr/m/n/10.95 , 16:157--166, 2016. [226] Underfull \hbox (badness 2073) in paragraph at lines 83--90 []\OT1/cmr/m/n/10 Provides a ba-sic overview of many sparse ma-trix al-go- Underfull \hbox (badness 1859) in paragraph at lines 83--90 \OT1/cmr/m/n/10 rithms and a sim-ple sparse ma-trix data struc-ture. The Underfull \hbox (badness 6380) in paragraph at lines 93--98 []\OT1/cmr/m/n/10.95 T. A Davis. Cre-at-ing sparse finite-element ma-tri-ces i n Underfull \hbox (badness 5490) in paragraph at lines 93--98 \OT1/cmr/m/n/10.95 MAT-LAB. \OT1/cmr/m/it/10.95 Loren on the Art of MAT-LAB\OT 1/cmr/m/n/10.95 , Mar. 2007. Underfull \hbox (badness 5985) in paragraph at lines 93--98 \OT1/cmr/m/n/10.95 Loren Shure, ed-i-tor. Pub-lished by The Math-Works, Nat- Underfull \hbox (badness 10000) in paragraph at lines 109--115 []\OT1/cmr/m/n/10.95 T. A. Davis. Al-go-rithm 9xx: Suite-Sparse:GraphBLAS: Underfull \hbox (badness 10000) in paragraph at lines 109--115 \OT1/cmr/m/n/10.95 graph al-go-rithms in the lan-guage of sparse lin-ear al-ge- Underfull \hbox (badness 2932) in paragraph at lines 109--115 \OT1/cmr/m/n/10.95 bra. \OT1/cmr/m/it/10.95 ACM Trans. on Math. Soft-ware\OT1/ cmr/m/n/10.95 , (to ap-pear), 2019. [227] Underfull \hbox (badness 5924) in paragraph at lines 141--147 []\OT1/cmr/m/n/10.95 F. G. Gus-tavson. Two fast al-go-rithms for sparse ma- Underfull \hbox (badness 5231) in paragraph at lines 141--147 \OT1/cmr/m/n/10.95 tri-ces: Mul-ti-pli-ca-tion and per-muted trans-po-si-tion. \OT1/cmr/m/it/10.95 ACM Underfull \hbox (badness 5924) in paragraph at lines 141--147 \OT1/cmr/m/it/10.95 Trans-ac-tions on Math-e-mat-i-cal Soft-ware\OT1/cmr/m/n/10 .95 , 4(3):250--269, 1978. Underfull \hbox (badness 4454) in paragraph at lines 158--163 []\OT1/cmr/m/n/10.95 J. Kep-ner. Graph-BLAS math-e-mat-ics. Tech-ni-cal re-po rt, Underfull \hbox (badness 4621) in paragraph at lines 158--163 \OT1/cmr/m/n/10.95 2017. [][]http://www.mit.edu/$\OMS/cmsy/m/n/10.95 ^^X$\OT1/ cmr/m/n/10.95 kepner/GraphBLAS/GraphBLAS- [228] Underfull \hbox (badness 1540) in paragraph at lines 194--199 []\OT1/cmr/m/n/10.95 M. Luby. A sim-ple par-al-lel al-go-rithm for the max-i-m al in- Underfull \hbox (badness 4341) in paragraph at lines 194--199 \OT1/cmr/m/n/10.95 de-pen-dent set prob-lem. \OT1/cmr/m/it/10.95 SIAM J. Com-p ut.\OT1/cmr/m/n/10.95 , 15(4), 1986. Underfull \hbox (badness 1226) in paragraph at lines 222--227 []\OT1/cmr/m/n/10.95 A. J. Wa-then. Re-al-is-tic eigen-value bounds for the Ga lerkin Underfull \hbox (badness 6944) in paragraph at lines 222--227 \OT1/cmr/m/n/10.95 mass ma-trix. \OT1/cmr/m/it/10.95 IMA J. Nu-mer. Anal.\OT1/ cmr/m/n/10.95 , 7:449--457, 1987. Underfull \hbox (badness 2205) in paragraph at lines 236--242 \OT1/cmr/m/n/10.95 S. Ra-ja-man-ickam. Fast lin-ear algebra-based tri-an-gle c ount- Underfull \hbox (badness 1783) in paragraph at lines 236--242 \OT1/cmr/m/it/10.95 treme Com-put-ing Con-fer-ence (HPEC)\OT1/cmr/m/n/10.95 , p ages 1--7, Sept 2017. [229]) [230] (./GraphBLAS_UserGuide.aux) ) (see the transcript file for additional information) Output written on GraphBLAS_UserGuide.pdf (230 pages, 853503 bytes). 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[10] [11] [12] [13] [14] Overfull \hbox (0.69284pt too wide) in paragraph at lines 356--361 []\OT1/cmr/m/it/12 Graph Al-go-rithms in the Lan-guage on Lin-ear Al-ge-bra\OT1 /cmr/m/n/12 , Kep-ner and Gilbert, [15] [16] [17] [18] [19] Overfull \hbox (8.66713pt too wide) in paragraph at lines 589--594 []\OT1/cmr/m/n/12 The Ac-cu-mu-la-tor Phase is fol-lowed by the Mask/Replace Ph ase, $[]$ Overfull \hbox (8.47243pt too wide) in paragraph at lines 665--665 [] \OT1/cmtt/m/n/10 p = C.pattern & T.pattern ; Z.matrix (p) = accum (C.mat rix (p), T.matrix (p));[] [20] [21] Package mdframed Warning: You got a bad break (mdframed) because the last box will be empty (mdframed) you have to change it manually (mdframed) by changing the text, the space (mdframed) or something else on input line 725. [22] [23] Overfull \hbox (13.20271pt too wide) in paragraph at lines 771--774 \OT1/cmr/m/n/12 ANSI C. Yet C leaves some type-cast-ing un-de-fined. Suite-Spar se:GraphBLAS [24] [25] Overfull \hbox (3.8319pt too wide) in paragraph at lines 852--852 []\OT1/cmr/bx/n/17.28 Interfaces to MAT-LAB, Python, Ju-lia, Java [26] Overfull \hbox (33.5095pt too wide) in paragraph at lines 937--940 \OT1/cmr/m/n/12 See Michel Pel-letier's Python in-ter-face at [][]https://githu b.com/michelp/pygraphblas[][]. [27] Overfull \hbox (19.49643pt too wide) in paragraph at lines 1005--1005 [] \OT1/cmtt/m/n/10 ... use features from version 1.4.0 of a specific GraphB LAS implementation[] Overfull \hbox (22.8047pt too wide) in paragraph at lines 1013--1031 [][] [28] [29] Overfull \hbox (0.80347pt too wide) in paragraph at lines 1139--1147 \OT1/cmr/m/n/12 namely: [][]\OT1/cmtt/m/n/12 GrB_*_nvals[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GrB_*_extractElement[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_*_extractTuples[]\OT1/cmr/m/n/12 , and [30] [31] (./GraphBLAS_API_version.tex) [32] Overfull \hbox (9.03737pt too wide) in paragraph at lines 1259--1264 \OT1/cmr/m/n/12 LAB) and then linked into a MAT-LAB [][]\OT1/cmtt/m/n/12 mexFun ction[]\OT1/cmr/m/n/12 . How-ever, a [][]\OT1/cmtt/m/n/12 mexFunction [33] [34] [35] [36] Overfull \hbox (7.08417pt too wide) in paragraph at lines 1439--1446 \OT1/cmr/m/n/12 Sparse:GraphBLAS adds two ad-di-tional ob-jects: a sparse scala r ([][]\OT1/cmtt/m/n/12 GxB_Scalar[]\OT1/cmr/m/n/12 ), Overfull \hbox (3.67369pt too wide) in paragraph at lines 1453--1473 [] [37] Overfull \hbox (25.98555pt too wide) in paragraph at lines 1503--1534 [] [38] [39] [40] [41] Overfull \hbox (3.28505pt too wide) in paragraph at lines 1689--1692 [][]\OT1/cmtt/m/n/12 GxB_Type_size (&s, GrB_INT32) []\OT1/cmr/m/n/12 sets [][]\ OT1/cmtt/m/n/12 s []\OT1/cmr/m/n/12 to 4, the same as [][]\OT1/cmtt/m/n/12 size of(int32_t)[]\OT1/cmr/m/n/12 . 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Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 2432. [53] [54] [55] Overfull \hbox (28.54279pt too wide) in paragraph at lines 2534--2534 []\OT1/cmr/bx/n/14.4 SuiteSparse:GraphBLAS se-lect op-er-a-tors: \OT1/cmss/m/n/ 14.4 GxB[]SelectOp Overfull \hbox (8.99652pt too wide) in paragraph at lines 2560--2560 [] \OT1/cmtt/m/n/10 const void *x, // value of A(i,j), or NULL if f is type-generic[] Overfull \hbox (13.94386pt too wide) in paragraph at lines 2568--2596 [][] [56] Overfull \hbox (1.92638pt too wide) in paragraph at lines 2633--2633 [] \OT1/cmtt/m/n/10 GrB_Type ttype // type of input thunk, or N ULL if type-generic[] [57] Overfull \hbox (74.71048pt too wide) in paragraph at lines 2672--2678 \OT1/cmr/m/n/12 choose to ex-ploit non-blocking mode to de-lay its cre-ation. 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[][]\OT1 /cmtt/m/n/12 GrB_Semiring_wait(&semiring) Overfull \hbox (23.8884pt too wide) in paragraph at lines 3264--3270 \OT1/cmr/m/n/12 noth-ing for [][]\OT1/cmtt/m/n/12 GrB_Semiring_wait(&semiring)[ ]\OT1/cmr/m/n/12 , ex-cept to en-sure that the [][]\OT1/cmtt/m/n/12 semiring [68] Overfull \hbox (7.17633pt too wide) in paragraph at lines 3307--3307 [] \OT1/cmtt/m/n/10 GrB_BinaryOp *multiply, // returns multiply oper ator of the semiring[] [69] Overfull \hbox (22.45738pt too wide) in paragraph at lines 3360--3375 [][] Underfull \hbox (badness 10000) in paragraph at lines 3360--3375 [70] [71] [72] [73] [74] Overfull \hbox (12.47293pt too wide) in paragraph at lines 3667--3671 \OT1/cmr/m/n/12 of the given type. This is anal-o-gous to MAT-LAB state-ment [] []\OT1/cmtt/m/n/12 v = sparse (n,1)[]\OT1/cmr/m/n/12 , [75] Overfull \hbox (9.02386pt too wide) in paragraph at lines 3748--3754 \OT1/cmr/m/n/12 were cre-ated fresh with [][]\OT1/cmtt/m/n/12 GrB_Vector_new[]\ OT1/cmr/m/n/12 . Anal-o-gous with [][]\OT1/cmtt/m/n/12 v (:) = sparse(0) [76] Overfull \hbox (33.82916pt too wide) in paragraph at lines 3813--3815 [][][]\OT1/cmtt/m/n/12 GxB_Vector_type []\OT1/cmr/m/n/12 re-turns the type of a vec-tor. Anal-o-gous to [][]\OT1/cmtt/m/n/12 type = class (v) [77] Overfull \hbox (5.42024pt too wide) in paragraph at lines 3871--3876 \OT1/cmr/m/n/12 op-er-a-tion is ex-actly like set-ting a sin-gle en-try in an [ ][]\OT1/cmtt/m/n/12 n[]\OT1/cmr/m/n/12 -by-1 ma-trix, [][]\OT1/cmtt/m/n/12 A(i, 0) = x[]\OT1/cmr/m/n/12 , Overfull \hbox (22.40071pt too wide) in paragraph at lines 3893--3902 [][][]\OT1/cmtt/m/n/12 GrB_Vector_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a vec-tor, [][]\OT1/cmtt/m/n/12 x = v(i)[]\OT1/cmr/m/n/12 . [78] [79] [80] Overfull \hbox (24.5408pt too wide) in paragraph at lines 4002--4040 [][] [81] [82] Overfull \hbox (21.21309pt too wide) in paragraph at lines 4164--4166 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows []\OT1/cmr/m/n/12 re-turns the num-ber of rows of a ma-trix ([][]\OT1/cmtt/m/n/12 nrows=size(A,1) Overfull \hbox (39.81706pt too wide) in paragraph at lines 4184--4186 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_ncols []\OT1/cmr/m/n/12 re-turns the num-ber of columns of a ma-trix ([][]\OT1/cmtt/m/n/12 ncols=size(A,2) [83] [84] [85] [86] Overfull \hbox (11.6521pt too wide) in paragraph at lines 4389--4402 [][]\OT1/cmtt/m/n/12 GrB_Matrix_nrows[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G xB_Matrix_type[]\OT1/cmr/m/n/12 , and of course [][]\OT1/cmtt/m/n/12 GrB_Matrix _setElement [87] Overfull \hbox (21.81322pt too wide) in paragraph at lines 4424--4426 [][][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement []\OT1/cmr/m/n/12 ex-tracts a sin-gle en-try from a ma-trix [][]\OT1/cmtt/m/n/12 x=A(i,j)[]\OT1/cmr/m/n/12 . [88] Overfull \hbox (39.24196pt too wide) in paragraph at lines 4508--4517 []\OT1/cmr/m/n/12 The num-ber of tu-ples in the ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/n/12 is given by [][]\OT1/cmtt/m/n/12 GrB_Matrix_nvals(&anvals,A)[ ]\OT1/cmr/m/n/12 . [89] [90] Overfull \hbox (6.42572pt too wide) in paragraph at lines 4571--4575 \OT1/cmr/m/n/12 The im-port/export func-tions al-low the user ap-pli-ca-tion to cre-ate a [][]\OT1/cmtt/m/n/12 GrB_Matrix Overfull \hbox (3.48825pt too wide) in paragraph at lines 4585--4589 []\OT1/cmr/m/n/12 incorporate them into its in-ter-nal data struc-ture for the new [][]\OT1/cmtt/m/n/12 GrB_Matrix [91] [92] Overfull \hbox (2.4533pt too wide) in paragraph at lines 4704--4707 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GxB_Vector_import []\OT1/cmr/m/n/12 func-tion is a fast way to con-struct a [][]\OT1/cmtt/m/n/12 GrB_Vector[]\OT1/c mr/m/n/12 , Overfull \hbox (8.99652pt too wide) in paragraph at lines 4720--4720 [] \OT1/cmtt/m/n/10 GxB_Matrix_import_CSC (&A, type, n, 1, nvals, -1, &Ap, & vi, &vx, desc) ;[] [93] [94] [95] Overfull \hbox (19.49643pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 2, 5, 7, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 int64_t Aj [ ] = { 0, 2, 0, 1, 3, 1, 2, 0, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 4919--4919 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.2, 3.1, 2.9, 0.9, 1.7, 3.0, 3. 5, 0.4, 1.0 } ;[] [96] [97] Overfull \hbox (19.49643pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ap [ ] = { 0, 3, 6, 8, 10 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 int64_t Ai [ ] = { 0, 1, 3, 1, 2, 3, 0, 2, 1, 3 } ;[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 5031--5031 [] \OT1/cmtt/m/n/10 double Ax [ ] = { 4.5, 3.1, 3.5, 2.9, 1.7, 0.4, 3.2, 3. 0, 0.9, 1.0 } ;[] Overfull \hbox (1.55626pt too wide) in paragraph at lines 5033--5036 []\OT1/cmr/m/n/12 That is, the row in-dices of col-umn 1 (the sec-ond col-umn) are in [][]\OT1/cmtt/m/n/12 Ai [3..5][]\OT1/cmr/m/n/12 , [98] [99] [100] [101] Overfull \hbox (1.92638pt too wide) in paragraph at lines 5212--5212 [] \OT1/cmtt/m/n/10 int64_t nonempty, // number of columns in Ah with at least one entry,[] [102] [103] [104] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5385--5385 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSR // export and free a hy persparse CSR matrix[] [105] Overfull \hbox (7.17633pt too wide) in paragraph at lines 5446--5446 []\OT1/cmtt/m/n/10 GrB_Info GxB_Matrix_export_HyperCSC // export and free a hy persparse CSC matrix[] [106] [107] [108] Overfull \hbox (5.91904pt too wide) in paragraph at lines 5616--5622 []\OT1/cmr/m/n/12 Vectors and scalars are never trans-posed via the de-scrip-to r. If a method's Overfull \hbox (4.20209pt too wide) in paragraph at lines 5616--5622 [][]\OT1/cmtt/m/n/12 desc [GrB_INP0] []\OT1/cmr/m/n/12 mod-i-fies the ma-trix p a-ram-e-ter and [][]\OT1/cmtt/m/n/12 desc [GrB_INP1] Overfull \hbox (22.34908pt too wide) in paragraph at lines 5636--5640 [][][]\OT1/cmtt/m/n/12 GxB_AxB_SAXPY[]\OT1/cmr/m/n/12 : se-lect any saxpy-based method: [][]\OT1/cmtt/m/n/12 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , [109] Overfull \hbox (6.3625pt too wide) in paragraph at lines 5657--5660 \OT1/cmr/m/n/12 ef-fi-cient for hy-per-sparse ma-tri-ces, matrix-vector-multipl y, and when [110] Overfull \hbox (7.86778pt too wide) in paragraph at lines 5719--5724 \OT1/cmr/m/n/12 to ex-ploit non-blocking mode to de-lay its cre-ation. [][]\OT1 /cmtt/m/n/12 GrB_Descriptor_wait(&d) Overfull \hbox (17.0722pt too wide) in paragraph at lines 5742--5751 [][][]\OT1/cmtt/m/n/12 GrB_Descriptor_set []\OT1/cmr/m/n/12 sets a de-scrip-tor field ([][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 G rB_MASK[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , Overfull \hbox (6.71817pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_Ax B_METHOD[]\OT1/cmr/m/n/12 ) to a par-tic-u-lar value ([][]\OT1/cmtt/m/n/12 GxB_ DEFAULT[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_COMP[]\OT1/cmr/m/n/12 , Overfull \hbox (75.18883pt too wide) in paragraph at lines 5742--5751 [][]\OT1/cmtt/m/n/12 GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_ COMP+GrB_STRUCTURE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_TRAN[]\OT1/cmr/m /n/12 , [][]\OT1/cmtt/m/n/12 GrB_REPLACE[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/1 2 GxB_AxB_GUSTAVSON[]\OT1/cmr/m/n/12 , Underfull \hbox (badness 2020) in paragraph at lines 5765--5769 [][][]\OT1/cmtt/m/n/10.95 GrB_REPLACE[]\OT1/cmr/m/n/10.95 : Af-ter com-put-ing Underfull \hbox (badness 2922) in paragraph at lines 5765--5769 []$\OT1/cmr/m/n/10.95 , the out-put \OT1/cmr/bx/n/10.95 C \OT1/cmr/m/n/10.95 is Underfull \hbox (badness 2035) in paragraph at lines 5765--5769 \OT1/cmr/m/n/10.95 cleared of all en-tries. Then Underfull \hbox (badness 4981) in paragraph at lines 5777--5781 \OT1/cmr/m/n/10.95 op-er-a-tion, while [][]\OT1/cmtt/m/n/10.95 Mask(i,j)=1 Underfull \hbox (badness 1540) in paragraph at lines 5782--5787 [][][]\OT1/cmtt/m/n/10.95 GrB_STRUCTURE[]\OT1/cmr/m/n/10.95 : The val-ues of Underfull \hbox (badness 5667) in paragraph at lines 5782--5787 \OT1/cmr/m/n/10.95 the Mask are ig-nored. If Underfull \hbox (badness 1178) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 Mask(i,j) []\OT1/cmr/m/n/10.95 is an en-try in the Underfull \hbox (badness 4872) in paragraph at lines 5782--5787 [][]\OT1/cmtt/m/n/10.95 GrB_COMP []\OT1/cmr/m/n/10.95 and [][]\OT1/cmtt/m/n/10. 95 GrB_STRUCTURE Underfull \hbox (badness 3838) in paragraph at lines 5793--5796 [][][]\OT1/cmtt/m/n/10.95 GrB_TRAN[]\OT1/cmr/m/n/10.95 : The first in-put is Underfull \hbox (badness 6252) in paragraph at lines 5811--5813 \OT1/cmr/m/n/10.95 method is used to com-pute Overfull \hbox (58.92297pt too wide) in paragraph at lines 5753--5817 [] Underfull \hbox (badness 10000) in paragraph at lines 5753--5817 [111] [112] [113] Overfull \hbox (28.49763pt too wide) in paragraph at lines 5913--5961 [] [114] Overfull \hbox (14.24648pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 H = G ; // valid; creates a 2nd handle o f the same object[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 5995--5995 [] \OT1/cmtt/m/n/10 GrB_free (&G) ; // valid; G is freed and set to NULL; H now undefined[] [115] [116] [117] Overfull \hbox (0.7007pt too wide) in paragraph at lines 6117--6125 []\OT1/cmr/m/n/12 SuiteSparse:GraphBLAS in-cludes two type-generic meth-ods, [] []\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/n/12 and Overfull \hbox (12.98712pt too wide) in paragraph at lines 6136--6141 [][][]\OT1/cmtt/m/n/12 GxB_set (GrB_Matrix A, field, value) []\OT1/cmr/m/n/12 p ro-vides hints to Suite-Sparse: Overfull \hbox (1.08037pt too wide) in paragraph at lines 6156--6158 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Matrix A, field, &value) []\OT1/cmr/m/n/12 re-trieves the cur-rent value Overfull \hbox (4.81274pt too wide) in paragraph at lines 6159--6161 [][][]\OT1/cmtt/m/n/12 GxB_get (GrB_Descriptor desc, field, &value) []\OT1/cmr/ m/n/12 re-trieves the value [118] Overfull \hbox (4.50215pt too wide) in paragraph at lines 6218--6221 \OT1/cmr/m/n/12 The de-fault for [][]\OT1/cmtt/m/n/12 nthreads_max []\OT1/cmr/m /n/12 is the re-turn value from [][]\OT1/cmtt/m/n/12 omp_get_max_threads[]\OT1/ cmr/m/n/12 , [119] [120] Overfull \hbox (11.60793pt too wide) in paragraph at lines 6269--6276 \OT1/cmr/m/n/12 Graph-BLAS API Spec-i-fi-ca-tion, where the breadth-first searc h [][]\OT1/cmtt/m/n/12 BFS []\OT1/cmr/m/n/12 uses [][]\OT1/cmtt/m/n/12 GrB_vxm Overfull \hbox (14.33583pt too wide) in paragraph at lines 6294--6299 \OT1/cmr/m/n/12 can be com-piled with [][]\OT1/cmtt/m/n/12 -DBYCOL[]\OT1/cmr/m/ n/12 , which changes the de-fault for-mat to [][]\OT1/cmtt/m/n/12 GxB_BY_COL[]\ OT1/cmr/m/n/12 , [121] Overfull \hbox (3.22508pt too wide) in paragraph at lines 6347--6351 []\OT1/cmr/m/n/12 If a ma-trix is cur-rently hy-per-sparse, it can be con-verte d to non-hypersparse [122] Overfull \hbox (18.1564pt too wide) in paragraph at lines 6376--6381 [][]\OT1/cmtt/m/n/12 GxB_BY_COL []\OT1/cmr/m/n/12 for-mat, as de-ter-mined by t he last call to [][]\OT1/cmtt/m/n/12 GxB_set(GxB_FORMAT,...) Overfull \hbox (3.83885pt too wide) in paragraph at lines 6386--6391 \OT1/cmr/m/n/12 type of the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 pa-ram -e-ter for the sec-ond ar-gu-ment of [][]\OT1/cmtt/m/n/12 GxB_set []\OT1/cmr/m/ n/12 and [][]\OT1/cmtt/m/n/12 GxB_get[]\OT1/cmr/m/n/12 , Overfull \hbox (19.49643pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_HYPER = 0, // defines switch to hypersparse for mat (double value)[] Overfull \hbox (3.74657pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_FORMAT = 1, // defines CSR/CSC format: GxB_BY_RO W or GxB_BY_COL[] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6407--6407 [] \OT1/cmtt/m/n/10 GxB_MODE = 2, // mode passed to GrB_init (blocking or non-blocking)[] [123] [124] [125] Overfull \hbox (19.69768pt too wide) in paragraph at lines 6531--6535 \OT1/cmr/m/n/12 This is de-ter-mined dur-ing in-stal-la-tion (see Sec-tion [][] 12.4[][]). Since [][]\OT1/cmtt/m/n/12 GxB_THREAD_NONE Overfull \hbox (14.24648pt too wide) in paragraph at lines 6567--6567 [] \OT1/cmtt/m/n/10 printf ("GraphBLAS is multi-threaded, internally, us ing OpenMP.\n") ;[] [126] [127] Overfull \hbox (44.81151pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 con-sis-tent with the other us-ages of this generic func-tion. Un-like [][]\OT1/cmtt/m/n/12 GrB_Descriptor_set[]\OT1/cmr/m/n/12 , Overfull \hbox (49.57497pt too wide) in paragraph at lines 6658--6663 \OT1/cmr/m/n/12 the [][]\OT1/cmtt/m/n/12 field []\OT1/cmr/m/n/12 may also be [] []\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , or [][]\OT1/cmtt/m/n/12 GxB_ CHUNK[]\OT1/cmr/m/n/12 . Re-fer to Sec-tions [][]5.11.3[][] and [][]5.11.4[][] Overfull \hbox (14.24648pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (s == GxB_BY_COL) printf ("all new matrices are store d by column\n") :[] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6712--6712 [] \OT1/cmtt/m/n/10 if (mode == GrB_BLOCKING) printf ("GrB_init(GrB_BLOCKING ) was called.\n") :[] [128] Overfull \hbox (24.74638pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is currently %shypersparse\n", is_hype r ? "not " : " ") ;[] Overfull \hbox (19.49643pt too wide) in paragraph at lines 6745--6745 [] \OT1/cmtt/m/n/10 printf ("matrix A is stored by %s\n", (s == GxB_BY_COL) ? "col" : "row") ;[] Overfull \hbox (1.31094pt too wide) in paragraph at lines 6762--6767 [][]\OT1/cmtt/m/n/12 GrB_OUTP[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_MASK[ ]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_INP0[]\OT1/cmr/m/n/12 , [][]\OT1/cm tt/m/n/12 GrB_INP1[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_AxB_METHOD[]\OT1 /cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GxB_NTHREADS[]\OT1/cmr/m/n/12 , [129] [130] [131] Overfull \hbox (2.24268pt too wide) in paragraph at lines 6872--6879 \OT1/cmr/m/n/12 MATLAB uses a colon no-ta-tion to in-dex into ma-tri-ces, such as [][]\OT1/cmtt/m/n/12 C=A(2:4,3:8)[]\OT1/cmr/m/n/12 , [132] Overfull \hbox (5.33707pt too wide) in paragraph at lines 6932--6935 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 GrB_extract[]\OT1/cmr/m/n/12 , [][]\ OT1/cmtt/m/n/12 GrB_assign[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 GxB_suba ssign []\OT1/cmr/m/n/12 op-er-a-tions (de-scribed Overfull \hbox (6.98373pt too wide) in paragraph at lines 6967--6974 \OT1/cmr/m/n/12 the spe-cial value [][]\OT1/cmtt/m/n/12 ni = GxB_RANGE[]\OT1/cm r/m/n/12 . The be-gin-ning in-dex is [][]\OT1/cmtt/m/n/12 I[GxB_BEGIN] [133] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7011--7011 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i <= I [GxB_END] ; i + = I [GxB_INC])[] [134] Overfull \hbox (22.62135pt too wide) in paragraph at lines 7057--7057 [] \OT1/cmtt/m/n/10 for (int64_t i = I [GxB_BEGIN] ; i >= I [GxB_END] ; i - = I [GxB_INC])[] [135] [136] Overfull \hbox (24.74638pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.matrix (:,:) = identity ; % the identity of th e semiring's monoid[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 T.class = multiply.ztype ; % the ztype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 A = cast (A.matrix, multiply.xtype) ; % the xtype of the s emiring's multiply op[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7192--7192 []\OT1/cmtt/m/n/10 B = cast (B.matrix, multiply.ytype) ; % the ytype of the s emiring's multiply op[] [137] [138] Overfull \hbox (16.83702pt too wide) in paragraph at lines 7267--7271 [][]\OT1/cmtt/m/n/12 GrB_vxm []\OT1/cmr/m/n/12 in-stead of [][]\OT1/cmtt/m/n/12 GrB_mxv[]\OT1/cmr/m/n/12 , since the de-fault for-mat in Suite-Sparse:GraphBLA S [139] [140] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7335--7340 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 $ \OT1/cmr/m/n/12 de-note the bi-nary op-er-a-tor to be used. The com-pu-ta-tio n $[]$ [141] [142] [143] Overfull \hbox (4.8362pt too wide) in paragraph at lines 7476--7486 []\OT1/cmr/m/n/12 Let $\OMS/cmsy/m/n/12 ^^H$ \OT1/cmr/m/n/12 de-note the bi-nar y op-er-a-tor to be used. The com-pu-ta-tion $[]$ [144] [145] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = A.pattern & ~B.pattern ; T.matrix (p) = cast (A.mat rix (p), add.ztype) ;[] Overfull \hbox (35.24629pt too wide) in paragraph at lines 7618--7618 [] \OT1/cmtt/m/n/10 p = ~A.pattern & B.pattern ; T.matrix (p) = cast (B.mat rix (p), add.ztype) ;[] [146] [147] [148] Overfull \hbox (28.4599pt too wide) in paragraph at lines 7752--7759 [][][]\OT1/cmtt/m/n/12 GrB_Col_extract []\OT1/cmr/m/n/12 ex-tracts a sub-vec-to r from a ma-trix, iden-ti-cal to [][]\OT1/cmtt/m/n/12 t = A (I,j) [149] [150] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7845--7845 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] Overfull \hbox (14.08577pt too wide) in paragraph at lines 7854--7865 [][] Overfull \hbox (16.61003pt too wide) in paragraph at lines 7882--7886 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, [][]\OT1/cmtt/m/n/12 GxB_Matrix _subassign[]\OT1/cmr/m/n/12 , the sub-ma-trix [][]\OT1/cmtt/m/n/12 C(I,J) [151] Overfull \hbox (11.08006pt too wide) in paragraph at lines 7903--7907 []\OT1/cmr/m/n/12 For sub-ma-trix as-sign-ment, $[]$ is com-puted, where [152] Overfull \hbox (1.92638pt too wide) in paragraph at lines 7964--7964 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(I ,j), unused if NULL[] Overfull \hbox (17.08905pt too wide) in paragraph at lines 7966--7974 \OT1/cmr/m/n/12 col-umn in-dex (and thus [][]\OT1/cmtt/m/n/12 nj=1[]\OT1/cmr/m/ n/12 ), and where all ma-tri-ces in [][]\OT1/cmtt/m/n/12 GxB_Matrix_subassign Overfull \hbox (1.92638pt too wide) in paragraph at lines 8001--8001 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,J), unused if NULL[] [153] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8020. [154] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8048. Overfull \hbox (1.92638pt too wide) in paragraph at lines 8067--8067 [] \OT1/cmtt/m/n/10 const GrB_Matrix Mask, // optional mask for C(I ,J), unused if NULL[] [155] [156] [157] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8229--8229 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(: ,j), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8243--8246 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [158] Overfull \hbox (1.92638pt too wide) in paragraph at lines 8267--8267 [] \OT1/cmtt/m/n/10 const GrB_Vector mask, // optional mask for C(i ,:), unused if NULL[] Overfull \hbox (59.74896pt too wide) in paragraph at lines 8281--8284 []\OT1/cmr/bx/n/12 Performance con-sid-er-a-tions:[] [][]\OT1/cmtt/m/n/12 GrB_ Col_assign []\OT1/cmr/m/n/12 is much faster than [][]\OT1/cmtt/m/n/12 GrB_Row_a ssign [159] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 8287. 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[160] [161] Overfull \hbox (30.07368pt too wide) in paragraph at lines 8384--8391 \OT1/cmr/m/n/12 as-sign-ment op-er-a-tions ([][]\OT1/cmtt/m/n/12 GrB_Matrix_ass ign_TYPE []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_Matrix_assign_TYPE[]\OT 1/cmr/m/n/12 ) Overfull \hbox (35.4029pt too wide) in paragraph at lines 8420--8420 [] \OT1/cmtt/m/n/10.95 % submatrix assignment with pre-sort of I and J; and remove duplicates[] [162] Overfull \hbox (5.09454pt too wide) in paragraph at lines 8436--8441 []\OT1/cmr/m/n/12 Results are al-ways well-defined in Suite-Sparse:GraphBLAS, b ut they might Overfull \hbox (8.22064pt too wide) in paragraph at lines 8470--8475 []\OT1/cmr/m/n/12 Instead, the first du-pli-cate in-dex of [][]\OT1/cmtt/m/n/12 I []\OT1/cmr/m/n/12 is dis-carded ([][]\OT1/cmtt/m/n/12 I [0] = 0[]\OT1/cmr/m/ n/12 , and [][]\OT1/cmtt/m/n/12 y(0)=5[]\OT1/cmr/m/n/12 ). [163] [164] [165] Overfull \hbox (10.16943pt too wide) in paragraph at lines 8588--8595 []\OT1/cmr/m/n/12 This no-ta-tion does not in-clude the de-tails of the [][]\OT 1/cmtt/m/n/12 GrB_COMP []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 GrB_REPLACE [166] Overfull \hbox (20.92456pt too wide) in paragraph at lines 8673--8720 [][] Underfull \hbox (badness 10000) in paragraph at lines 8673--8720 [167] [168] [169] [170] [171] Overfull \hbox (0.92876pt too wide) in paragraph at lines 8915--8917 []\OT1/cmr/m/n/12 The fol-low-ing guide-lines should be con-sid-ered when us-in g [][]\OT1/cmtt/m/n/12 GxB_subassign[]\OT1/cmr/m/n/12 , [172] [173] Overfull \hbox (6.09775pt too wide) in paragraph at lines 8984--8993 \OT1/cmr/m/n/12 is pro-vided as the $\OML/cmm/m/it/12 x$ \OT1/cmr/m/n/12 in-put to the bi-nary op-er-a-tor. [][]\OT1/cmtt/m/n/12 GrB_*_apply_BinaryOp2nd* [174] [175] [176] [177] [178] Overfull \hbox (1.92638pt too wide) in paragraph at lines 9251--9251 []\OT1/cmtt/m/n/10 GrB_Info GxB_select // C = accum (C, o p(A,k)) or op(A',k)[] [179] Overfull \hbox (24.15204pt too wide) in paragraph at lines 9326--9369 [][] [180] [181] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9382. [182] Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 9430. 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[184] Overfull \hbox (9.00838pt too wide) in paragraph at lines 9532--9539 [][][]\OT1/cmtt/m/n/12 GrB_transpose []\OT1/cmr/m/n/12 trans-poses a ma-trix [] []\OT1/cmtt/m/n/12 A[]\OT1/cmr/m/n/12 , just like the ar-ray trans-pose [][]\OT 1/cmtt/m/n/12 T = A.' [185] Overfull \hbox (10.46268pt too wide) in paragraph at lines 9578--9584 []\OT1/cmr/m/n/12 Since the in-put ma-trix [][]\OT1/cmtt/m/n/12 A []\OT1/cmr/m/ n/12 is trans-posed by the de-scrip-tor, SuiteSparse:Graph- [186] Overfull \hbox (10.68494pt too wide) in paragraph at lines 9640--9642 [][][]\OT1/cmtt/m/n/12 GrB_kronecker []\OT1/cmr/m/n/12 com-putes the Kro-necker prod-uct, $[]$ Overfull \hbox (14.29266pt too wide) in paragraph at lines 9663--9666 []\OT1/cmr/m/n/12 The op-er-a-tor [][]\OT1/cmtt/m/n/12 op []\OT1/cmr/m/n/12 may be a [][]\OT1/cmtt/m/n/12 GrB_BinaryOp[]\OT1/cmr/m/n/12 , a [][]\OT1/cmtt/m/n/ 12 GrB_Monoid[]\OT1/cmr/m/n/12 , or a [][]\OT1/cmtt/m/n/12 GrB_Semiring[]\OT1/c mr/m/n/12 . [187] Overfull \hbox (59.0538pt too wide) in paragraph at lines 9678--9685 \OT1/cmr/m/n/12 such as [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractTuples[]\OT1/cmr /m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Matrix_extractElement[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_Matrix_type[]\OT1/cmr/m/n/12 , [188] Overfull \hbox (1.52788pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 As a re-sult, the ex-act con-tent and for-mat of what is printe d is implementation- Overfull \hbox (7.41396pt too wide) in paragraph at lines 9764--9772 \OT1/cmr/m/n/12 dependent, and will change from ver-sion to ver-sion of Suite-S parse:GraphBLAS. [189] Overfull \hbox (59.93402pt too wide) in paragraph at lines 9831--9833 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Type_fprint (GrB_BOOL , "boolean type", GxB_COMPLETE, f) [190] Overfull \hbox (22.884pt too wide) in paragraph at lines 9851--9854 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_UnaryOp_fprint (GrB_L NOT, "not", GxB_COMPLETE, f) Overfull \hbox (66.10902pt too wide) in paragraph at lines 9872--9875 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_BinaryOp_fprint (GrB_ PLUS_FP64, "plus", GxB_COMPLETE, f) Overfull \hbox (35.23401pt too wide) in paragraph at lines 9893--9896 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_SelectOp_fprint (GxB_ TRIL, "tril", GxB_COMPLETE, f) [191] Overfull \hbox (35.23401pt too wide) in paragraph at lines 9914--9919 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Monoid_fprint (GxB_PL US_FP64_MONOID, "plus monoid", Overfull \hbox (22.884pt too wide) in paragraph at lines 9936--9940 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Semiring_fprint (GxB_ PLUS_TIMES_FP64, "standard", Overfull \hbox (41.40901pt too wide) in paragraph at lines 9957--9960 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Descriptor_fprint (d, "descriptor", GxB_COMPLETE, f) [192] Overfull \hbox (24.38643pt too wide) in paragraph at lines 9978--9980 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Matrix_fprint (A, "my matrix", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 9998--10000 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Vector_fprint (v, "my vector", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints Overfull \hbox (24.38643pt too wide) in paragraph at lines 10017--10019 []\OT1/cmr/m/n/12 For ex-am-ple, [][]\OT1/cmtt/m/n/12 GxB_Scalar_fprint (s, "my scalar", GxB_SHORT, f) []\OT1/cmr/m/n/12 prints [193] [194] [195] [196] [197] [198] [199] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10294--10294 [] \OT1/cmtt/m/n/10 if (v_output == NULL) LAGRAPH_ERROR ("argument missing", GrB_NULL_POINTER) ;[] [200] Overfull \hbox (14.24648pt too wide) in paragraph at lines 10344--10344 [] \OT1/cmtt/m/n/10 GrB_vxm (neighbor_max, candidates, NULL, maxFirst, p rob, A, r_desc) ;[] [201] Overfull \hbox (7.17633pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseMult (prob, candidates, NULL, set_random, d egrees, X, r_desc) ;[] Overfull \hbox (12.42628pt too wide) in paragraph at lines 10390--10390 [] \OT1/cmtt/m/n/10 GrB_eWiseAdd (new_members, NULL,NULL, GrB_GT_FP64, p rob, neighbor_max,0);[] [202] Overfull \hbox (23.03032pt too wide) in paragraph at lines 10400--10408 \OT1/cmr/m/n/12 The col-umn [][]\OT1/cmtt/m/n/12 A(:,j) []\OT1/cmr/m/n/12 is th e ad-ja-cency of node [][]\OT1/cmtt/m/n/12 j[]\OT1/cmr/m/n/12 , and the dot pro d-uct [][]\OT1/cmtt/m/n/12 prob'*A(:,j) [203] [204] [205] [206] [207] Overfull \hbox (24.54538pt too wide) in paragraph at lines 10664--10671 \OT1/cmr/m/n/12 ca-tion to con-struct the tu-ple list, and is al-most as fast a s us-ing [][]\OT1/cmtt/m/n/12 GrB_Matrix_build[]\OT1/cmr/m/n/12 . Overfull \hbox (3.74657pt too wide) in paragraph at lines 10699--10699 [] \OT1/cmtt/m/n/10 GrB_Matrix_setElement (F, em (krow,kcol) , krow, kcol) ;[] [208] [209] [210] [211] [212] Overfull \hbox (32.48866pt too wide) in paragraph at lines 10948--10964 [][] Underfull \hbox (badness 10000) in paragraph at lines 10948--10964 [213] Overfull \hbox (30.00606pt too wide) in paragraph at lines 10988--10988 []\OT1/cmr/bx/n/14.4 User ap-pli-ca-tions us-ing OpenMP or POSIX pthreads Overfull \hbox (4.40424pt too wide) in paragraph at lines 10992--11000 \OT1/cmr/m/n/12 Two ex-am-ple demo pro-grams are in-cluded that il-lus-trate ho w a multi-threaded [214] Overfull \hbox (69.41573pt too wide) in paragraph at lines 11050--11050 []\OT1/cmr/bx/n/17.28 Compiling and In-stalling Suite-Sparse:GraphBLAS Overfull \hbox (16.05841pt too wide) in paragraph at lines 11073--11078 [][]\OT1/cmtt/m/n/12 #pragma omp atomic write[]\OT1/cmr/bx/n/12 . The use of gc c for Suite-Sparse:GraphBLAS [215] Overfull \hbox (31.69743pt too wide) in paragraph at lines 11160--11162 []\OT1/cmr/m/n/12 Open a ter-mi-nal win-dow and type this in the [][]\OT1/cmtt/ m/n/12 SuiteSparse/GraphBLAS/build [216] Overfull \hbox (33.58942pt too wide) in paragraph at lines 11169--11172 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 cmake []\OT1/cmr/m/n/12 com-mand gen -er-ates many files in [][]\OT1/cmtt/m/n/12 SuiteSparse/GraphBLAS/build[]\OT1/c mr/m/n/12 , Overfull \hbox (32.85522pt too wide) in paragraph at lines 11169--11172 \OT1/cmr/m/n/12 and the file [][]\OT1/cmtt/m/n/12 graphblas.sln []\OT1/cmr/m/n/ 12 in par-tic-u-lar. Open the gen-er-ated [][]\OT1/cmtt/m/n/12 graphblas.sln Overfull \hbox (15.61084pt too wide) in paragraph at lines 11173--11178 [][]\OT1/cmtt/m/n/12 C/C++[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 General []\O T1/cmr/m/n/12 and change the pa-ram-e-ter [][]\OT1/cmtt/m/n/12 Multiprocessor C ompilation Overfull \hbox (46.26897pt too wide) in paragraph at lines 11179--11185 []\OT1/cmr/m/n/12 Select the [][]\OT1/cmtt/m/n/12 Build []\OT1/cmr/m/n/12 menu item at the top of the win-dow and se-lect [][]\OT1/cmtt/m/n/12 Build Solution[ ]\OT1/cmr/m/n/12 . Overfull \hbox (5.25778pt too wide) in paragraph at lines 11179--11185 [][]\OT1/cmtt/m/n/12 graphblas.dll[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 grap hblas.lib[]\OT1/cmr/m/n/12 , and [][]\OT1/cmtt/m/n/12 graphblas.exp []\OT1/cmr/ m/n/12 files there. Please Overfull \hbox (72.643pt too wide) in paragraph at lines 11197--11200 []\OT1/cmr/m/n/12 From the top left side of the [][]\OT1/cmtt/m/n/12 System []\ OT1/cmr/m/n/12 win-dow, se-lect [][]\OT1/cmtt/m/n/12 Advanced System Settings[] \OT1/cmr/m/n/12 . Overfull \hbox (10.57393pt too wide) in paragraph at lines 11200--11203 []\OT1/cmr/m/n/12 The [][]\OT1/cmtt/m/n/12 Systems Properties []\OT1/cmr/m/n/12 win-dow should ap-pear with the [][]\OT1/cmtt/m/n/12 Advanced [217] Overfull \hbox (13.64095pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 If the above steps do not work, you can in-stead copy the [][ ]\OT1/cmtt/m/n/12 graphblas.* Overfull \hbox (3.27658pt too wide) in paragraph at lines 11211--11214 []\OT1/cmr/m/n/12 files from [][]\OT1/cmtt/m/n/12 GraphBLAS\build\Release []\OT 1/cmr/m/n/12 into any ex-ist-ing folder listed Overfull \hbox (10.70392pt too wide) in paragraph at lines 11226--11230 \OT1/cmr/m/n/12 First, com-pile the Suite-Sparse:GraphBLAS dy-namic li-brary ([ ][]\OT1/cmtt/m/n/12 libgraphblas.so Overfull \hbox (20.77408pt too wide) in paragraph at lines 11239--11242 []\OT1/cmr/m/n/12 Follow the re-main-ing in-struc-tions in the [][]\OT1/cmtt/m/ n/12 GraphBLAS/GraphBLAS/README.md [218] Overfull \hbox (21.92802pt too wide) in paragraph at lines 11270--11275 \OT1/cmr/m/n/12 You may need to add the above lines in your [][]\OT1/cmtt/m/n/1 2 Documents/MATLAB/startup.m Overfull \hbox (34.38116pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 sult, [][]\OT1/cmtt/m/n/12 GxB_ASIN_FC32[]\OT1/cmr/m/n/12 , [][ ]\OT1/cmtt/m/n/12 GxB_ASIN_FC64 []GxB_ASINH_FC32[]\OT1/cmr/m/n/12 , and [][]\OT 1/cmtt/m/n/12 GxB_ASINH_FC64 Overfull \hbox (4.84929pt too wide) in paragraph at lines 11284--11293 []\OT1/cmr/m/n/12 do not work prop-erly on Win-dows. This af-fects the [][]\OT1 /cmtt/m/n/12 GrB/asin[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB/acsc[]\OT1/cm r/m/n/12 , Overfull \hbox (99.57925pt too wide) in paragraph at lines 11284--11293 \OT1/cmr/m/n/12 the MAT-LAB tests by-passed in [][]\OT1/cmtt/m/n/12 gbtest76.m []\OT1/cmr/m/n/12 for de-tails, in the [][]\OT1/cmtt/m/n/12 GraphBLAS/GraphBLAS /test Overfull \hbox (34.12076pt too wide) in paragraph at lines 11304--11315 \OT1/cmr/m/n/12 com-plete. This can be done for all ob-jects via [][]\OT1/cmtt/ m/n/12 GrB_Matrix_wait[]\OT1/cmr/m/n/12 , [][]\OT1/cmtt/m/n/12 GrB_Vector_wait[ ]\OT1/cmr/m/n/12 , [219] Overfull \hbox (17.6559pt too wide) in paragraph at lines 11328--11335 \OT1/cmr/m/n/12 pthreads. If OpenMP is present, it uses OpenMP crit-i-cal sec-t ions for [][]\OT1/cmtt/m/n/12 GrB_wait() Overfull \hbox (0.44614pt too wide) in paragraph at lines 11362--11364 []\OT1/cmr/m/n/12 no user thread-ing: com-pile with [][]\OT1/cmtt/m/n/12 cmake -DUSER_NONE=1[]\OT1/cmr/m/n/12 . \OT1/cmr/bx/n/12 Graph-BLAS Overfull \hbox (9.50793pt too wide) in paragraph at lines 11371--11374 [][]\OT1/cmtt/m/n/12 GxB_BY_ROW []\OT1/cmr/m/n/12 for-mat. You can change the d e-fault at com-pile time to [][]\OT1/cmtt/m/n/12 GxB_BY_COL [220] Overfull \hbox (52.64896pt too wide) in paragraph at lines 11387--11387 [] \OT1/cmtt/m/n/10.95 if (s == GxB_BY_COL) printf ("all new matrices are st ored by column\n") :[] Overfull \hbox (3.09839pt too wide) in paragraph at lines 11403--11409 \OT1/cmr/m/n/12 Then do [][]\OT1/cmtt/m/n/12 make []\OT1/cmr/m/n/12 in the [][] \OT1/cmtt/m/n/12 build []\OT1/cmr/m/n/12 di-rec-tory. If this still fails, see the [][]\OT1/cmtt/m/n/12 CMakeLists.txt Overfull \hbox (0.91077pt too wide) in paragraph at lines 11426--11426 [] \OT1/cmtt/m/n/10.95 # cmake 2.8 workaround: gcc needs to be told to d o ANSI C11.[] [221] Overfull \hbox (5.06398pt too wide) in paragraph at lines 11432--11435 []\OT1/cmr/m/n/12 file, but these are meant only for code de-vel-op-ment of Sui te-Sparse:GraphBLAS Overfull \hbox (8.18504pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 both at com-pile time and then at run time with [][]\OT1/cmtt/m /n/12 GxB_set [](GxB_BURBLE, true)[]\OT1/cmr/m/n/12 , Overfull \hbox (25.41429pt too wide) in paragraph at lines 11436--11449 \OT1/cmr/m/n/12 or [][]\OT1/cmtt/m/n/12 GrB.burble(1) []\OT1/cmr/m/n/12 in the MAT-LAB in-ter-face. If en-abled, Suite-Sparse:GraphBLAS [222] Overfull \hbox (1.21198pt too wide) in paragraph at lines 11480--11483 \OT1/cmr/m/n/12 To in-stall the li-brary (typ-i-cally in [][]\OT1/cmtt/m/n/12 / usr/local/lib []\OT1/cmr/m/n/12 and [][]\OT1/cmtt/m/n/12 /usr/local/include [223] Overfull \hbox (0.30112pt too wide) in paragraph at lines 11543--11550 \OT1/cmss/m/n/12 redislabs . com / redis-[]enterprise / technology / redisgraph /$[][]\OT1/cmr/m/n/12 ), a graph database mod- Overfull \hbox (36.16724pt too wide) in paragraph at lines 11543--11550 [][]$\OT1/cmss/m/n/10 https : / / redislabs . com / blog / new-[]redisgraph-[]1 -[]0-[]achieves-[]600x-[]faster-[]performance-[]graph-[]databases/$[][]\OT1/cmr /m/n/12 ). [224] [225] (./GraphBLAS_UserGuide.bbl Underfull \hbox (badness 5696) in paragraph at lines 35--41 []\OT1/cmr/m/n/10.95 A. Bulu^^Xc and J. Gilbert. Par-al-lel sparse matrix-matr ix Underfull \hbox (badness 1210) in paragraph at lines 35--41 \OT1/cmr/m/n/10.95 mul-ti-pli-ca-tion and in-dex-ing: Im-ple-men-ta-tion and ex -per-i-ments. Underfull \hbox (badness 10000) in paragraph at lines 58--63 []\OT1/cmr/m/n/10.95 P. Burkhardt. Graph-ing tril-lions of tri-an- Underfull \hbox (badness 10000) in paragraph at lines 58--63 \OT1/cmr/m/n/10.95 gles. \OT1/cmr/m/it/10.95 In-for-ma-tion Vi-su-al-iza-tion\ OT1/cmr/m/n/10.95 , 16:157--166, 2016. [226] Underfull \hbox (badness 2073) in paragraph at lines 83--90 []\OT1/cmr/m/n/10 Provides a ba-sic overview of many sparse ma-trix al-go- Underfull \hbox (badness 1859) in paragraph at lines 83--90 \OT1/cmr/m/n/10 rithms and a sim-ple sparse ma-trix data struc-ture. The Underfull \hbox (badness 6380) in paragraph at lines 93--98 []\OT1/cmr/m/n/10.95 T. A Davis. Cre-at-ing sparse finite-element ma-tri-ces i n Underfull \hbox (badness 5490) in paragraph at lines 93--98 \OT1/cmr/m/n/10.95 MAT-LAB. \OT1/cmr/m/it/10.95 Loren on the Art of MAT-LAB\OT 1/cmr/m/n/10.95 , Mar. 2007. Underfull \hbox (badness 5985) in paragraph at lines 93--98 \OT1/cmr/m/n/10.95 Loren Shure, ed-i-tor. Pub-lished by The Math-Works, Nat- Underfull \hbox (badness 10000) in paragraph at lines 109--115 []\OT1/cmr/m/n/10.95 T. A. Davis. Al-go-rithm 9xx: Suite-Sparse:GraphBLAS: Underfull \hbox (badness 10000) in paragraph at lines 109--115 \OT1/cmr/m/n/10.95 graph al-go-rithms in the lan-guage of sparse lin-ear al-ge- Underfull \hbox (badness 2932) in paragraph at lines 109--115 \OT1/cmr/m/n/10.95 bra. \OT1/cmr/m/it/10.95 ACM Trans. on Math. Soft-ware\OT1/ cmr/m/n/10.95 , (to ap-pear), 2019. [227] Underfull \hbox (badness 5924) in paragraph at lines 141--147 []\OT1/cmr/m/n/10.95 F. G. Gus-tavson. Two fast al-go-rithms for sparse ma- Underfull \hbox (badness 5231) in paragraph at lines 141--147 \OT1/cmr/m/n/10.95 tri-ces: Mul-ti-pli-ca-tion and per-muted trans-po-si-tion. \OT1/cmr/m/it/10.95 ACM Underfull \hbox (badness 5924) in paragraph at lines 141--147 \OT1/cmr/m/it/10.95 Trans-ac-tions on Math-e-mat-i-cal Soft-ware\OT1/cmr/m/n/10 .95 , 4(3):250--269, 1978. Underfull \hbox (badness 4454) in paragraph at lines 158--163 []\OT1/cmr/m/n/10.95 J. Kep-ner. Graph-BLAS math-e-mat-ics. Tech-ni-cal re-po rt, Underfull \hbox (badness 4621) in paragraph at lines 158--163 \OT1/cmr/m/n/10.95 2017. [][]http://www.mit.edu/$\OMS/cmsy/m/n/10.95 ^^X$\OT1/ cmr/m/n/10.95 kepner/GraphBLAS/GraphBLAS- [228] Underfull \hbox (badness 1540) in paragraph at lines 194--199 []\OT1/cmr/m/n/10.95 M. Luby. A sim-ple par-al-lel al-go-rithm for the max-i-m al in- Underfull \hbox (badness 4341) in paragraph at lines 194--199 \OT1/cmr/m/n/10.95 de-pen-dent set prob-lem. \OT1/cmr/m/it/10.95 SIAM J. Com-p ut.\OT1/cmr/m/n/10.95 , 15(4), 1986. Underfull \hbox (badness 1226) in paragraph at lines 222--227 []\OT1/cmr/m/n/10.95 A. J. Wa-then. Re-al-is-tic eigen-value bounds for the Ga lerkin Underfull \hbox (badness 6944) in paragraph at lines 222--227 \OT1/cmr/m/n/10.95 mass ma-trix. \OT1/cmr/m/it/10.95 IMA J. Nu-mer. Anal.\OT1/ cmr/m/n/10.95 , 7:449--457, 1987. Underfull \hbox (badness 2205) in paragraph at lines 236--242 \OT1/cmr/m/n/10.95 S. Ra-ja-man-ickam. Fast lin-ear algebra-based tri-an-gle c ount- Underfull \hbox (badness 1783) in paragraph at lines 236--242 \OT1/cmr/m/it/10.95 treme Com-put-ing Con-fer-ence (HPEC)\OT1/cmr/m/n/10.95 , p ages 1--7, Sept 2017. [229]) [230] (./GraphBLAS_UserGuide.aux) ) (see the transcript file for additional information) Output written on GraphBLAS_UserGuide.pdf (230 pages, 853503 bytes). Transcript written on GraphBLAS_UserGuide.log. make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS/Doc' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/GraphBLAS' ( cd Mongoose && make docs ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose' ( cd build ; cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_FLAGS_RELEASE="-g -O2 -fdebug-prefix-map=/build/reproducible-path/suitesparse-5.8.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" -DCMAKE_CXX_FLAGS_RELEASE="-g -O2 -fdebug-prefix-map=/build/reproducible-path/suitesparse-5.8.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" -DCMAKE_SKIP_RPATH=TRUE -DCMAKE_BUILD_TYPE=Release -DCMAKE_CXX_COMPILER=g++ -DCMAKE_C_COMPILER=cc .. ; make userguide ) -- The CXX compiler identification is GNU 10.2.1 -- The C compiler identification is GNU 10.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - 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AED: lastpage setting LastPage [21] (./Mongoose_UserGuide.aux) ) (see the transcript file for additional information) Output written on Mongoose_UserGuide.pdf (21 pages). Transcript written on Mongoose_UserGuide.log. make[8]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/Doc' make[7]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build' Built target userguide make[6]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build/CMakeFiles 0 make[5]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build' make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose/build' make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/Mongoose' ( cd AMD && make docs ) make[3]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD' ( cd Doc ; make ) make[4]: Entering directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Doc' echo '\\begin{verbatim}' > amd_h.tex expand -8 ../Include/amd.h >> amd_h.tex echo '\\end{verbatim}' >> amd_h.tex pdflatex AMD_UserGuide This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./AMD_UserGuide.tex LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) No file AMD_UserGuide.aux. Underfull \hbox (badness 10000) in paragraph at lines 36--36 [][]\OT1/cmr/m/n/9 ENSEEIHT-IRIT, 2 rue Camichel 31017 Toulouse, France. email: amestoy@enseeiht.fr. Underfull \hbox (badness 1320) in paragraph at lines 36--36 \OT1/cmr/m/n/9 http://www.numerical.rl.ac.uk/people/isd/isd.html. This work was sup-ported by the EP-SRC un-der grant [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] LaTeX Warning: Citation `AmestoyDavisDuff96' on page 2 undefined on input line 74. LaTeX Warning: Citation `AmestoyDavisDuff04' on page 2 undefined on input line 74. LaTeX Warning: Citation `GeorgeLiu89' on page 2 undefined on input line 80. LaTeX Warning: Citation `RothbergEisenstat98' on page 2 undefined on input line 82. LaTeX Warning: Citation `Chaco' on page 2 undefined on input line 83. LaTeX Warning: Citation `KarypisKumar98e' on page 2 undefined on input line 83. LaTeX Warning: Citation `PellegriniRomanAmestoy00' on page 2 undefined on input line 83. LaTeX Warning: Citation `schu:01' on page 2 undefined on input line 83. LaTeX Warning: Citation `AmestoyDavisDuff96' on page 2 undefined on input line 135. LaTeX Warning: Citation `GeorgeLiu89' on page 2 undefined on input line 139. LaTeX Warning: Citation `hsl:2002' on page 2 undefined on input line 148. [2] LaTeX Warning: Reference `Install' on page 3 undefined on input line 164. LaTeX Warning: Citation `DavisGilbertLarimoreNg04' on page 3 undefined on input line 189. LaTeX Warning: Reference `Primary' on page 3 undefined on input line 216. [3] [4] Overfull \hbox (36.49995pt too wide) in paragraph at lines 351--363 []\OT1/cmtt/m/n/10.95 Control[AMD[]DENSE] \OT1/cmr/m/n/10.95 (or \OT1/cmtt/m/n/ 10.95 Control(1) \OT1/cmr/m/n/10.95 in MAT-LAB): con-trols the thresh-old for ` `dense'' rows/columns. LaTeX Warning: Citation `AmestoyDavisDuff96' on page 5 undefined on input line 368. LaTeX Warning: Citation `AmestoyDavisDuff04' on page 5 undefined on input line 368. LaTeX Warning: Reference `Synopsis' on page 5 undefined on input line 388. [5] [6] [7] LaTeX Warning: Reference `Cversion' on page 8 undefined on input line 616. [8] Overfull \hbox (37.68399pt too wide) in paragraph at lines 704--709 []\OT1/cmr/m/n/10.95 Alternatively, you can in-stall the shared li-brary and in -clude files in /usr/local/lib and /usr/local/include, [9] [10] (./amd_h.tex ! LaTeX Error: There's no line here to end. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1 \\b egin{verbatim} ? ! Emergency stop. ... l.1 \\b egin{verbatim} ! ==> Fatal error occurred, no output PDF file produced! Transcript written on AMD_UserGuide.log. make[4]: *** [Makefile:29: AMD_UserGuide.pdf] Error 1 make[4]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD/Doc' make[3]: *** [Makefile:55: docs] Error 2 make[3]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg/AMD' make[2]: *** [Makefile:236: docs] Error 2 make[2]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' make[1]: *** [debian/rules:32: override_dh_auto_build] Error 2 make[1]: Leaving directory '/build/reproducible-path/suitesparse-5.8.1+dfsg' make: *** [debian/rules:26: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/C01_cleanup starting debug output: disk usage on i-capture-the-hostname at Sat Feb 8 07:32:03 UTC 2025 Filesystem Size Used Avail Use% Mounted on tmpfs 16G 0 16G 0% /dev/shm I: user script /srv/workspace/pbuilder/2271444/tmp/hooks/C01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2271444 and its subdirectories