I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 9 14:02:15 +14 2021 I: pbuilder-time-stamp: 1625788935 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-bioc-fmcsr_1.32.0+dfsg-1.dsc] I: copying [./r-bioc-fmcsr_1.32.0+dfsg.orig.tar.xz] I: copying [./r-bioc-fmcsr_1.32.0+dfsg-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.Dn3YlMof/trustedkeys.kbx': General error gpgv: Signature made Mon Nov 2 07:02:04 2020 +14 gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./r-bioc-fmcsr_1.32.0+dfsg-1.dsc dpkg-source: info: extracting r-bioc-fmcsr in r-bioc-fmcsr-1.32.0+dfsg dpkg-source: info: unpacking r-bioc-fmcsr_1.32.0+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-fmcsr_1.32.0+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/12400/tmp/hooks/D01_modify_environment starting debug: Running on codethink10-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/12400/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/12400/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/var/lib/jenkins HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=12400 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.ZX0Axe2dht/pbuilderrc_DC3u --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.ZX0Axe2dht/b2 --logfile b2/build.log --extrapackages usrmerge r-bioc-fmcsr_1.32.0+dfsg-1.dsc' SUDO_GID=117 SUDO_UID=110 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root USERNAME=root _='I: set' http_proxy=http://192.168.101.16:3128 I: uname -a Linux i-capture-the-hostname 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Jun 22 16:26 bash -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash -rwxr-xr-x 1 root root 101384 Sep 23 2020 date -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd -rwxr-xr-x 1 root root 89824 Sep 23 2020 df -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir -rwxr-xr-x 1 root root 76152 Feb 8 04:38 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 64856 Feb 8 04:38 findmnt -rwsr-xr-x 1 root root 34824 Feb 27 06:12 fusermount -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe -rwxr-xr-x 1 root root 93744 Mar 3 13:30 gzip -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln -rwxr-xr-x 1 root root 52720 Feb 8 2020 login -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls -rwxr-xr-x 1 root root 161960 Feb 8 04:38 lsblk -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 51368 Feb 8 04:38 more -rwsr-xr-x 1 root root 51360 Feb 8 04:38 mount -rwxr-xr-x 1 root root 14496 Feb 8 04:38 mountpoint -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Jul 9 14:02 sh -> bash lrwxrwxrwx 1 root root 4 Jul 7 23:24 sh.distrib -> dash -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty -rwsr-xr-x 1 root root 67776 Feb 8 04:38 su -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 23:55 tar -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch -rwxr-xr-x 1 root root 31512 Sep 23 2020 true -rwxr-xr-x 1 root root 14264 Feb 27 06:12 ulockmgr_server -rwsr-xr-x 1 root root 30880 Feb 8 04:38 umount -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir -rwxr-xr-x 1 root root 59584 Feb 8 04:38 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew I: user script /srv/workspace/pbuilder/12400/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-chemminer, r-cran-runit, r-bioc-biocgenerics dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-chemminer; however: Package r-bioc-chemminer is not installed. pbuilder-satisfydepends-dummy depends on r-cran-runit; however: Package r-cran-runit is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biocgenerics; however: Package r-bioc-biocgenerics is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo-gobject2{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libcurl3-gnutls{a} libcurl4{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu67{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-bootstrap{a} libjs-d3{a} libjs-es5-shim{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-jquery-datatables-extensions{a} libjs-jquery-selectize.js{a} libjs-jquery-ui{a} libjs-json{a} libjs-microplugin.js{a} libjs-sifter.js{a} libjs-twitter-bootstrap-datepicker{a} liblapack-dev{a} liblapack3{a} libldap-2.4-2{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnghttp2-14{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix2{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libreadline-dev{a} libreadline8{a} librsvg2-2{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsm6{a} libssh2-1{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff5{a} libtimedate-perl{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1{a} libvariable-magic-perl{a} libwebp6{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6{a} m4{a} man-db{a} node-html5shiv{a} node-normalize.css{a} openssl{a} pkg-config{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-bioc-biocgenerics{a} r-bioc-chemminer{a} r-cran-assertthat{a} r-cran-base64enc{a} r-cran-bh{a} r-cran-bitops{a} r-cran-brio{a} r-cran-callr{a} r-cran-cli{a} r-cran-colorspace{a} r-cran-commonmark{a} r-cran-crayon{a} r-cran-crosstalk{a} r-cran-dbi{a} r-cran-desc{a} r-cran-diffobj{a} r-cran-digest{a} r-cran-dt{a} r-cran-ellipsis{a} r-cran-evaluate{a} r-cran-fansi{a} r-cran-farver{a} r-cran-fastmap{a} r-cran-ggplot2{a} r-cran-glue{a} r-cran-gridextra{a} r-cran-gtable{a} r-cran-htmltools{a} r-cran-htmlwidgets{a} r-cran-httpuv{a} r-cran-isoband{a} r-cran-jsonlite{a} r-cran-labeling{a} r-cran-later{a} r-cran-lattice{a} r-cran-lazyeval{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-mgcv{a} r-cran-mime{a} r-cran-munsell{a} r-cran-nlme{a} r-cran-pillar{a} r-cran-pkgbuild{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-pkgload{a} r-cran-png{a} r-cran-praise{a} r-cran-prettyunits{a} r-cran-processx{a} r-cran-promises{a} r-cran-ps{a} r-cran-r6{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcurl{a} r-cran-rematch2{a} r-cran-rjson{a} r-cran-rlang{a} r-cran-rprojroot{a} r-cran-rstudioapi{a} r-cran-rsvg{a} r-cran-runit{a} r-cran-scales{a} r-cran-shiny{a} r-cran-sourcetools{a} r-cran-testthat{a} r-cran-tibble{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-viridislite{a} r-cran-waldo{a} r-cran-withr{a} r-cran-xtable{a} r-cran-yaml{a} readline-common{a} sensible-utils{a} shared-mime-info{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common libarchive-cpio-perl libclass-c3-xs-perl libclone-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libgdk-pixbuf2.0-bin libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools librsvg2-common libsasl2-modules libx11-protocol-perl lynx publicsuffix r-cran-bit64 r-cran-cliapp r-cran-codetools r-cran-curl r-cran-data.table r-cran-dplyr r-cran-dygraphs r-cran-future r-cran-generics r-cran-hexbin r-cran-hms r-cran-knitr r-cran-lubridate r-cran-mapproj r-cran-markdown r-cran-mockery r-cran-mockr r-cran-quantreg r-cran-rmarkdown r-cran-rsqlite r-cran-sp r-cran-vdiffr r-cran-xml2 r-doc-html r-recommended wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 276 newly installed, 0 to remove and 0 not upgraded. Need to get 148 MB of archives. After unpacking 522 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 node-normalize.css all 8.0.1-3 [12.5 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 openssl arm64 1.1.1k-1 [829 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 ca-certificates all 20210119 [158 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 ucf all 3.0043 [74.0 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 dctrl-tools arm64 2.24-3 [101 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 zip arm64 3.0-12 [228 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 unzip arm64 6.0-26 [165 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libpaper1 arm64 1.1.28+b1 [21.4 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libpaper-utils arm64 1.1.28+b1 [18.3 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 libblas3 arm64 3.9.0-3 [101 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 libpng16-16 arm64 1.6.37-3 [289 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 libfreetype6 arm64 2.10.4+dfsg-1 [393 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 fonts-dejavu-core all 2.37-2 [1069 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libfontconfig1 arm64 2.13.1-4.2 [344 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libpixman-1-0 arm64 0.40.0-1 [444 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 libmd0 arm64 1.0.3-3 [27.9 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libbsd0 arm64 0.11.3-1 [106 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libx11-data all 2:1.7.1-1 [310 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 libx11-6 arm64 2:1.7.1-1 [747 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libxcb-render0 arm64 1.14-3 [111 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 libxcb-shm0 arm64 1.14-3 [101 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 libxext6 arm64 2:1.3.3-1.1 [51.6 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 libxrender1 arm64 1:0.9.10-1 [30.4 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 libcairo2 arm64 1.16.0-5 [648 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2.1 [69.3 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2.1 [105 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 libldap-2.4-2 arm64 2.4.57+dfsg-3 [222 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 libssh2-1 arm64 1.9.0-2 [150 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 libcurl4 arm64 7.74.0-1.3+b1 [321 kB] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libglib2.0-0 arm64 2.66.8-1 [1286 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 76 http://deb.debian.org/debian bullseye/main arm64 liblapack3 arm64 3.9.0-3 [1541 kB] Get: 77 http://deb.debian.org/debian bullseye/main arm64 fontconfig arm64 2.13.1-4.2 [416 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libfribidi0 arm64 1.0.8-2 [64.8 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libgraphite2-3 arm64 1.3.14-1 [75.6 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libharfbuzz0b arm64 2.7.4-1 [1445 kB] Get: 81 http://deb.debian.org/debian bullseye/main arm64 libthai-data all 0.1.28-3 [170 kB] Get: 82 http://deb.debian.org/debian bullseye/main arm64 libdatrie1 arm64 0.2.13-1 [42.1 kB] Get: 83 http://deb.debian.org/debian bullseye/main arm64 libthai0 arm64 0.1.28-3 [53.0 kB] Get: 84 http://deb.debian.org/debian bullseye/main arm64 libpango-1.0-0 arm64 1.46.2-3 [183 kB] Get: 85 http://deb.debian.org/debian bullseye/main arm64 libpangoft2-1.0-0 arm64 1.46.2-3 [59.4 kB] Get: 86 http://deb.debian.org/debian bullseye/main arm64 libpangocairo-1.0-0 arm64 1.46.2-3 [48.6 kB] Get: 87 http://deb.debian.org/debian bullseye/main arm64 libtcl8.6 arm64 8.6.11+dfsg-1 [964 kB] Get: 88 http://deb.debian.org/debian bullseye/main arm64 libdeflate0 arm64 1.7-1 [47.7 kB] Get: 89 http://deb.debian.org/debian bullseye/main arm64 libjbig0 arm64 2.1-3.1+b2 [27.8 kB] Get: 90 http://deb.debian.org/debian bullseye/main arm64 libwebp6 arm64 0.6.1-2.1 [244 kB] Get: 91 http://deb.debian.org/debian bullseye/main arm64 libtiff5 arm64 4.2.0-1 [276 kB] Get: 92 http://deb.debian.org/debian bullseye/main arm64 libxft2 arm64 2.3.2-2 [51.3 kB] Get: 93 http://deb.debian.org/debian bullseye/main arm64 x11-common all 1:7.7+22 [252 kB] Get: 94 http://deb.debian.org/debian bullseye/main arm64 libxss1 arm64 1:1.2.3-1 [17.8 kB] Get: 95 http://deb.debian.org/debian bullseye/main arm64 libtk8.6 arm64 8.6.11-2 [738 kB] Get: 96 http://deb.debian.org/debian bullseye/main arm64 libice6 arm64 2:1.0.10-1 [55.6 kB] Get: 97 http://deb.debian.org/debian bullseye/main arm64 libsm6 arm64 2:1.2.3-1 [34.0 kB] Get: 98 http://deb.debian.org/debian bullseye/main arm64 libxt6 arm64 1:1.2.0-1 [176 kB] Get: 99 http://deb.debian.org/debian bullseye/main arm64 r-base-core arm64 4.0.4-1 [24.9 MB] Get: 100 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 101 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 102 http://deb.debian.org/debian bullseye/main arm64 gfortran arm64 4:10.2.1-1 [1424 B] Get: 103 http://deb.debian.org/debian bullseye/main arm64 libblas-dev arm64 3.9.0-3 [107 kB] Get: 104 http://deb.debian.org/debian bullseye/main arm64 liblapack-dev arm64 3.9.0-3 [2758 kB] Get: 105 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 106 http://deb.debian.org/debian bullseye/main arm64 libncurses-dev arm64 6.2+20201114-2 [335 kB] Get: 107 http://deb.debian.org/debian bullseye/main arm64 libncurses5-dev arm64 6.2+20201114-2 [936 B] Get: 108 http://deb.debian.org/debian bullseye/main arm64 libreadline-dev arm64 8.1-1 [153 kB] Get: 109 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo-dev arm64 1:2.0.6-4 [255 kB] Get: 110 http://deb.debian.org/debian bullseye/main arm64 libjpeg-dev arm64 1:2.0.6-4 [67.8 kB] Get: 111 http://deb.debian.org/debian bullseye/main arm64 libpcre2-16-0 arm64 10.36-2 [202 kB] Get: 112 http://deb.debian.org/debian bullseye/main arm64 libpcre2-32-0 arm64 10.36-2 [193 kB] Get: 113 http://deb.debian.org/debian bullseye/main arm64 libpcre2-posix2 arm64 10.36-2 [49.0 kB] Get: 114 http://deb.debian.org/debian bullseye/main arm64 libpcre2-dev arm64 10.36-2 [645 kB] Get: 115 http://deb.debian.org/debian bullseye/main arm64 libpcre16-3 arm64 2:8.39-13 [236 kB] Get: 116 http://deb.debian.org/debian bullseye/main arm64 libpcre32-3 arm64 2:8.39-13 [229 kB] Get: 117 http://deb.debian.org/debian bullseye/main arm64 libpcrecpp0v5 arm64 2:8.39-13 [151 kB] Get: 118 http://deb.debian.org/debian bullseye/main arm64 libpcre3-dev arm64 2:8.39-13 [579 kB] Get: 119 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 120 http://deb.debian.org/debian bullseye/main arm64 libpng-dev arm64 1.6.37-3 [294 kB] Get: 121 http://deb.debian.org/debian bullseye/main arm64 libbz2-dev arm64 1.0.8-4 [31.5 kB] Get: 122 http://deb.debian.org/debian bullseye/main arm64 liblzma-dev arm64 5.2.5-2 [227 kB] Get: 123 http://deb.debian.org/debian bullseye/main arm64 icu-devtools arm64 67.1-7 [189 kB] Get: 124 http://deb.debian.org/debian bullseye/main arm64 libicu-dev arm64 67.1-7 [9468 kB] Get: 125 http://deb.debian.org/debian bullseye/main arm64 libxmuu1 arm64 2:1.1.2-2+b3 [24.1 kB] Get: 126 http://deb.debian.org/debian bullseye/main arm64 xauth arm64 1:1.1-1 [40.0 kB] Get: 127 http://deb.debian.org/debian bullseye/main arm64 pkg-config arm64 0.29.2-1 [63.6 kB] Get: 128 http://deb.debian.org/debian bullseye/main arm64 r-base-dev all 4.0.4-1 [4484 B] Get: 129 http://deb.debian.org/debian bullseye/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get: 130 http://deb.debian.org/debian bullseye/main arm64 libswitch-perl all 2.17-2.1 [20.0 kB] Get: 131 http://deb.debian.org/debian bullseye/main arm64 libencode-locale-perl all 1.05-1.1 [13.2 kB] Get: 132 http://deb.debian.org/debian bullseye/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 133 http://deb.debian.org/debian bullseye/main arm64 libhttp-date-perl all 6.05-1 [10.4 kB] Get: 134 http://deb.debian.org/debian bullseye/main arm64 libio-html-perl all 1.004-2 [16.1 kB] Get: 135 http://deb.debian.org/debian bullseye/main arm64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get: 136 http://deb.debian.org/debian bullseye/main arm64 liburi-perl all 5.08-1 [90.6 kB] Get: 137 http://deb.debian.org/debian bullseye/main arm64 libhttp-message-perl all 6.28-1 [79.6 kB] Get: 138 http://deb.debian.org/debian bullseye/main arm64 libparams-util-perl arm64 1.102-1+b1 [25.3 kB] Get: 139 http://deb.debian.org/debian bullseye/main arm64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get: 140 http://deb.debian.org/debian bullseye/main arm64 libdata-optlist-perl all 0.110-1.1 [10.8 kB] Get: 141 http://deb.debian.org/debian bullseye/main arm64 libb-hooks-op-check-perl arm64 0.22-1+b3 [11.2 kB] Get: 142 http://deb.debian.org/debian bullseye/main arm64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get: 143 http://deb.debian.org/debian bullseye/main arm64 libdevel-callchecker-perl arm64 0.008-1+b2 [15.8 kB] Get: 144 http://deb.debian.org/debian bullseye/main arm64 libparams-classify-perl arm64 0.015-1+b3 [25.5 kB] Get: 145 http://deb.debian.org/debian bullseye/main arm64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get: 146 http://deb.debian.org/debian bullseye/main arm64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 147 http://deb.debian.org/debian bullseye/main arm64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get: 148 http://deb.debian.org/debian bullseye/main arm64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get: 149 http://deb.debian.org/debian bullseye/main arm64 libclass-load-perl all 0.25-1 [16.1 kB] Get: 150 http://deb.debian.org/debian bullseye/main arm64 libclass-load-xs-perl arm64 0.10-1+b5 [14.5 kB] Get: 151 http://deb.debian.org/debian bullseye/main arm64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get: 152 http://deb.debian.org/debian bullseye/main arm64 libdevel-globaldestruction-perl all 0.14-1.1 [8312 B] Get: 153 http://deb.debian.org/debian bullseye/main arm64 libalgorithm-c3-perl all 0.11-1 [11.7 kB] Get: 154 http://deb.debian.org/debian bullseye/main arm64 libclass-c3-perl all 0.35-1 [22.9 kB] Get: 155 http://deb.debian.org/debian bullseye/main arm64 libmro-compat-perl all 0.13-1 [12.2 kB] Get: 156 http://deb.debian.org/debian bullseye/main arm64 libsub-identify-perl arm64 0.14-1+b3 [11.9 kB] Get: 157 http://deb.debian.org/debian bullseye/main arm64 libdevel-overloadinfo-perl all 0.005-1 [7212 B] Get: 158 http://deb.debian.org/debian bullseye/main arm64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get: 159 http://deb.debian.org/debian bullseye/main arm64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get: 160 http://deb.debian.org/debian bullseye/main arm64 libeval-closure-perl all 0.14-1 [11.5 kB] Get: 161 http://deb.debian.org/debian bullseye/main arm64 libdist-checkconflicts-perl all 0.11-1.1 [10.2 kB] Get: 162 http://deb.debian.org/debian bullseye/main arm64 libmodule-runtime-conflicts-perl all 0.003-1.1 [7156 B] Get: 163 http://deb.debian.org/debian bullseye/main arm64 libsub-name-perl arm64 0.26-1+b1 [13.5 kB] Get: 164 http://deb.debian.org/debian bullseye/main arm64 libpackage-deprecationmanager-perl all 0.17-1.1 [16.6 kB] Get: 165 http://deb.debian.org/debian bullseye/main arm64 libpackage-stash-xs-perl arm64 0.29-1+b2 [19.7 kB] Get: 166 http://deb.debian.org/debian bullseye/main arm64 libmoose-perl arm64 2.2014-2 [802 kB] Get: 167 http://deb.debian.org/debian bullseye/main arm64 libvariable-magic-perl arm64 0.62-1+b3 [44.2 kB] Get: 168 http://deb.debian.org/debian bullseye/main arm64 libb-hooks-endofscope-perl all 0.24-1.1 [18.9 kB] Get: 169 http://deb.debian.org/debian bullseye/main arm64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get: 170 http://deb.debian.org/debian bullseye/main arm64 libcurl3-gnutls arm64 7.74.0-1.3+b1 [318 kB] Get: 171 http://deb.debian.org/debian bullseye/main arm64 libwww-curl-perl arm64 4.17-7+b1 [59.3 kB] Get: 172 http://deb.debian.org/debian bullseye/main arm64 libwww-curl-simple-perl all 0.100191-2 [12.5 kB] Get: 173 http://deb.debian.org/debian bullseye/main arm64 dh-r all 20210303 [41.8 kB] Get: 174 http://deb.debian.org/debian bullseye/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 175 http://deb.debian.org/debian bullseye/main arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-2 [164 kB] Get: 176 http://deb.debian.org/debian bullseye/main arm64 libboost1.74-dev arm64 1.74.0-9 [9534 kB] Get: 177 http://deb.debian.org/debian bullseye/main arm64 libboost-dev arm64 1.74.0.3 [4548 B] Get: 178 http://deb.debian.org/debian bullseye/main arm64 libcairo-gobject2 arm64 1.16.0-5 [125 kB] Get: 179 http://deb.debian.org/debian bullseye/main arm64 libgdk-pixbuf2.0-common all 2.42.2+dfsg-1 [320 kB] Get: 180 http://deb.debian.org/debian bullseye/main arm64 shared-mime-info arm64 2.0-1 [700 kB] Get: 181 http://deb.debian.org/debian bullseye/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.2+dfsg-1 [136 kB] Get: 182 http://deb.debian.org/debian bullseye/main arm64 libjs-bootstrap all 3.4.1+dfsg-2 [173 kB] Get: 183 http://deb.debian.org/debian bullseye/main arm64 libjs-d3 all 3.5.17-4 [132 kB] Get: 184 http://deb.debian.org/debian bullseye/main arm64 libjs-es5-shim all 4.5.15-1 [43.6 kB] Get: 185 http://deb.debian.org/debian bullseye/main arm64 libjs-highlight.js all 9.18.5+dfsg1-1 [397 kB] Get: 186 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 187 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-datatables all 1.10.21+dfsg-2 [138 kB] Get: 188 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] Get: 189 http://deb.debian.org/debian bullseye/main arm64 libjs-sifter.js all 0.6.0+dfsg-1 [12.1 kB] Get: 190 http://deb.debian.org/debian bullseye/main arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get: 191 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get: 192 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 193 http://deb.debian.org/debian bullseye/main arm64 libjs-json all 0~20190826+~1.0.5-2 [20.5 kB] Get: 194 http://deb.debian.org/debian bullseye/main arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get: 195 http://deb.debian.org/debian bullseye/main arm64 librsvg2-2 arm64 2.50.3+dfsg-1 [2133 kB] Get: 196 http://deb.debian.org/debian bullseye/main arm64 libuv1 arm64 1.40.0-1 [126 kB] Get: 197 http://deb.debian.org/debian bullseye/main arm64 node-html5shiv all 3.7.3+dfsg-3 [12.9 kB] Get: 198 http://deb.debian.org/debian bullseye/main arm64 r-bioc-biocgenerics all 0.36.0-1 [648 kB] Get: 199 http://deb.debian.org/debian bullseye/main arm64 r-cran-littler arm64 0.3.12-1 [95.1 kB] Get: 200 http://deb.debian.org/debian bullseye/main arm64 r-cran-rjson arm64 0.2.20-2 [126 kB] Get: 201 http://deb.debian.org/debian bullseye/main arm64 r-cran-bitops arm64 1.0-6-5 [23.5 kB] Get: 202 http://deb.debian.org/debian bullseye/main arm64 r-cran-rcurl arm64 1.98-1.2-1+b1 [787 kB] Get: 203 http://deb.debian.org/debian bullseye/main arm64 r-cran-dbi all 1.1.1-1 [619 kB] Get: 204 http://deb.debian.org/debian bullseye/main arm64 r-cran-digest arm64 0.6.27-1 [185 kB] Get: 205 http://deb.debian.org/debian bullseye/main arm64 r-cran-pkgkitten all 0.2.1-1 [26.5 kB] Get: 206 http://deb.debian.org/debian bullseye/main arm64 r-cran-rcpp arm64 1.0.6-1 [2020 kB] Get: 207 http://deb.debian.org/debian bullseye/main arm64 r-cran-glue arm64 1.4.2-1 [138 kB] Get: 208 http://deb.debian.org/debian bullseye/main arm64 r-cran-gtable all 0.3.0+dfsg-2 [163 kB] Get: 209 http://deb.debian.org/debian bullseye/main arm64 r-cran-brio arm64 1.1.1-1 [31.0 kB] Get: 210 http://deb.debian.org/debian bullseye/main arm64 r-cran-ps arm64 1.5.0-1 [275 kB] Get: 211 http://deb.debian.org/debian bullseye/main arm64 r-cran-r6 all 2.5.0-1 [104 kB] Get: 212 http://deb.debian.org/debian bullseye/main arm64 r-cran-processx arm64 3.4.5-1 [294 kB] Get: 213 http://deb.debian.org/debian bullseye/main arm64 r-cran-callr all 3.5.1-1 [386 kB] Get: 214 http://deb.debian.org/debian bullseye/main arm64 r-cran-assertthat all 0.2.1-2 [56.5 kB] Get: 215 http://deb.debian.org/debian bullseye/main arm64 r-cran-cli all 2.3.0-1 [480 kB] Get: 216 http://deb.debian.org/debian bullseye/main arm64 r-cran-crayon all 1.4.0-1 [143 kB] Get: 217 http://deb.debian.org/debian bullseye/main arm64 r-cran-rprojroot all 2.0.2-1 [114 kB] Get: 218 http://deb.debian.org/debian bullseye/main arm64 r-cran-desc all 1.2.0-3 [301 kB] Get: 219 http://deb.debian.org/debian bullseye/main arm64 r-cran-rlang arm64 0.4.10-1 [1177 kB] Get: 220 http://deb.debian.org/debian bullseye/main arm64 r-cran-ellipsis arm64 0.3.1-1 [31.7 kB] Get: 221 http://deb.debian.org/debian bullseye/main arm64 r-cran-evaluate all 0.14-2 [81.1 kB] Get: 222 http://deb.debian.org/debian bullseye/main arm64 r-cran-jsonlite arm64 1.7.2+dfsg-1 [445 kB] Get: 223 http://deb.debian.org/debian bullseye/main arm64 r-cran-lifecycle all 0.2.0-2 [93.2 kB] Get: 224 http://deb.debian.org/debian bullseye/main arm64 r-cran-magrittr arm64 2.0.1-1 [198 kB] Get: 225 http://deb.debian.org/debian bullseye/main arm64 r-cran-prettyunits all 1.1.1-2 [39.1 kB] Get: 226 http://deb.debian.org/debian bullseye/main arm64 r-cran-withr all 2.4.1-1 [210 kB] Get: 227 http://deb.debian.org/debian bullseye/main arm64 r-cran-pkgbuild all 1.2.0-1 [146 kB] Get: 228 http://deb.debian.org/debian bullseye/main arm64 r-cran-rstudioapi all 0.13-1 [262 kB] Get: 229 http://deb.debian.org/debian bullseye/main arm64 r-cran-pkgload arm64 1.1.0-1 [168 kB] Get: 230 http://deb.debian.org/debian bullseye/main arm64 r-cran-praise all 1.0.0-4 [20.1 kB] Get: 231 http://deb.debian.org/debian bullseye/main arm64 r-cran-diffobj arm64 0.3.2-1 [1069 kB] Get: 232 http://deb.debian.org/debian bullseye/main arm64 r-cran-fansi arm64 0.4.2-1 [340 kB] Get: 233 http://deb.debian.org/debian bullseye/main arm64 r-cran-utf8 arm64 1.1.4-2 [131 kB] Get: 234 http://deb.debian.org/debian bullseye/main arm64 r-cran-vctrs arm64 0.3.6-1 [1094 kB] Get: 235 http://deb.debian.org/debian bullseye/main arm64 r-cran-pillar all 1.4.7-1 [227 kB] Get: 236 http://deb.debian.org/debian bullseye/main arm64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get: 237 http://deb.debian.org/debian bullseye/main arm64 r-cran-tibble arm64 3.0.6+dfsg-1 [416 kB] Get: 238 http://deb.debian.org/debian bullseye/main arm64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get: 239 http://deb.debian.org/debian bullseye/main arm64 r-cran-waldo all 0.2.3-2 [79.3 kB] Get: 240 http://deb.debian.org/debian bullseye/main arm64 r-cran-testthat arm64 3.0.1-1 [1439 kB] Get: 241 http://deb.debian.org/debian bullseye/main arm64 r-cran-isoband arm64 0.2.3-2 [2062 kB] Get: 242 http://deb.debian.org/debian bullseye/main arm64 r-cran-mass arm64 7.3-53.1-1 [1114 kB] Get: 243 http://deb.debian.org/debian bullseye/main arm64 r-cran-lattice arm64 0.20-41-1+b1 [1164 kB] Get: 244 http://deb.debian.org/debian bullseye/main arm64 r-cran-nlme arm64 3.1.152-1 [2238 kB] Get: 245 http://deb.debian.org/debian bullseye/main arm64 r-cran-matrix arm64 1.3-2-1 [3559 kB] Get: 246 http://deb.debian.org/debian bullseye/main arm64 r-cran-mgcv arm64 1.8-34-1 [2978 kB] Get: 247 http://deb.debian.org/debian bullseye/main arm64 r-cran-farver arm64 2.0.3-1+b1 [1380 kB] Get: 248 http://deb.debian.org/debian bullseye/main arm64 r-cran-labeling all 0.4.2-1 [62.7 kB] Get: 249 http://deb.debian.org/debian bullseye/main arm64 r-cran-colorspace arm64 2.0-0+dfsg-1 [1683 kB] Get: 250 http://deb.debian.org/debian bullseye/main arm64 r-cran-munsell all 0.5.0-2 [236 kB] Get: 251 http://deb.debian.org/debian bullseye/main arm64 r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB] Get: 252 http://deb.debian.org/debian bullseye/main arm64 r-cran-viridislite all 0.3.0-4 [59.2 kB] Get: 253 http://deb.debian.org/debian bullseye/main arm64 r-cran-scales all 1.1.1-1 [557 kB] Get: 254 http://deb.debian.org/debian bullseye/main arm64 r-cran-ggplot2 all 3.3.3+dfsg-1 [3158 kB] Get: 255 http://deb.debian.org/debian bullseye/main arm64 r-cran-gridextra all 2.3-3 [1024 kB] Get: 256 http://deb.debian.org/debian bullseye/main arm64 r-cran-png arm64 0.1-7-4 [39.9 kB] Get: 257 http://deb.debian.org/debian bullseye/main arm64 r-cran-base64enc arm64 0.1-3-3 [27.8 kB] Get: 258 http://deb.debian.org/debian bullseye/main arm64 r-cran-htmltools arm64 0.5.1.1-1 [241 kB] Get: 259 http://deb.debian.org/debian bullseye/main arm64 r-cran-yaml arm64 2.2.1-1+b1 [97.0 kB] Get: 260 http://deb.debian.org/debian bullseye/main arm64 r-cran-htmlwidgets all 1.5.3+dfsg-1 [124 kB] Get: 261 http://deb.debian.org/debian bullseye/main arm64 r-cran-lazyeval arm64 0.2.2-1+b1 [143 kB] Get: 262 http://deb.debian.org/debian bullseye/main arm64 r-cran-bh all 1.74.0-1 [5196 B] Get: 263 http://deb.debian.org/debian bullseye/main arm64 r-cran-later arm64 1.1.0.1+dfsg-1 [112 kB] Get: 264 http://deb.debian.org/debian bullseye/main arm64 r-cran-promises arm64 1.1.1+dfsg-1 [171 kB] Get: 265 http://deb.debian.org/debian bullseye/main arm64 r-cran-httpuv arm64 1.5.5+dfsg-1 [470 kB] Get: 266 http://deb.debian.org/debian bullseye/main arm64 r-cran-mime arm64 0.9-1+b1 [35.4 kB] Get: 267 http://deb.debian.org/debian bullseye/main arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] Get: 268 http://deb.debian.org/debian bullseye/main arm64 r-cran-sourcetools arm64 0.1.7-3 [44.5 kB] Get: 269 http://deb.debian.org/debian bullseye/main arm64 r-cran-fastmap arm64 1.1.0-1 [63.9 kB] Get: 270 http://deb.debian.org/debian bullseye/main arm64 r-cran-commonmark arm64 1.7-2 [100.0 kB] Get: 271 http://deb.debian.org/debian bullseye/main arm64 r-cran-shiny all 1.5.0+dfsg-2 [3599 kB] Get: 272 http://deb.debian.org/debian bullseye/main arm64 r-cran-crosstalk all 1.1.1+dfsg-2 [167 kB] Get: 273 http://deb.debian.org/debian bullseye/main arm64 r-cran-dt all 0.17+dfsg-3 [209 kB] Get: 274 http://deb.debian.org/debian bullseye/main arm64 r-cran-rsvg arm64 2.1-1 [241 kB] Get: 275 http://deb.debian.org/debian bullseye/main arm64 r-bioc-chemminer arm64 3.42.1+dfsg-1 [1146 kB] Get: 276 http://deb.debian.org/debian bullseye/main arm64 r-cran-runit all 0.4.32-3 [294 kB] Fetched 148 MB in 2s (59.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../001-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../003-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package node-normalize.css. Preparing to unpack .../005-node-normalize.css_8.0.1-3_all.deb ... Unpacking node-normalize.css (8.0.1-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../006-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../007-libreadline8_8.1-1_arm64.deb ... Unpacking libreadline8:arm64 (8.1-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../008-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package openssl. Preparing to unpack .../009-openssl_1.1.1k-1_arm64.deb ... Unpacking openssl (1.1.1k-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../010-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../011-libmagic-mgc_1%3a5.39-3_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../012-libmagic1_1%3a5.39-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../013-file_1%3a5.39-3_arm64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../014-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../016-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../017-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../018-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../019-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../020-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../021-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../022-dctrl-tools_2.24-3_arm64.deb ... Unpacking dctrl-tools (2.24-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../023-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../024-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../025-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../026-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../027-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../028-libfile-stripnondeterminism-perl_1.11.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.11.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../029-dh-strip-nondeterminism_1.11.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.11.0-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../030-libelf1_0.183-1_arm64.deb ... Unpacking libelf1:arm64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../031-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:arm64. Preparing to unpack .../032-libicu67_67.1-7_arm64.deb ... Unpacking libicu67:arm64 (67.1-7) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../033-libxml2_2.9.10+dfsg-6.7_arm64.deb ... Unpacking libxml2:arm64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../034-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../035-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../036-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../037-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package zip. Preparing to unpack .../038-zip_3.0-12_arm64.deb ... Unpacking zip (3.0-12) ... Selecting previously unselected package unzip. Preparing to unpack .../039-unzip_6.0-26_arm64.deb ... Unpacking unzip (6.0-26) ... Selecting previously unselected package libpaper1:arm64. Preparing to unpack .../040-libpaper1_1.1.28+b1_arm64.deb ... Unpacking libpaper1:arm64 (1.1.28+b1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../041-libpaper-utils_1.1.28+b1_arm64.deb ... Unpacking libpaper-utils (1.1.28+b1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../042-xdg-utils_1.1.3-4.1_all.deb ... Unpacking xdg-utils (1.1.3-4.1) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../043-libblas3_3.9.0-3_arm64.deb ... Unpacking libblas3:arm64 (3.9.0-3) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../044-libexpat1_2.2.10-2_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../045-libbrotli1_1.0.9-2+b2_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b2) ... Selecting previously unselected package libpng16-16:arm64. Preparing to unpack .../046-libpng16-16_1.6.37-3_arm64.deb ... Unpacking libpng16-16:arm64 (1.6.37-3) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../047-libfreetype6_2.10.4+dfsg-1_arm64.deb ... Unpacking libfreetype6:arm64 (2.10.4+dfsg-1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../048-fonts-dejavu-core_2.37-2_all.deb ... Unpacking fonts-dejavu-core (2.37-2) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../049-fontconfig-config_2.13.1-4.2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../050-libfontconfig1_2.13.1-4.2_arm64.deb ... Unpacking libfontconfig1:arm64 (2.13.1-4.2) ... Selecting previously unselected package libpixman-1-0:arm64. Preparing to unpack .../051-libpixman-1-0_0.40.0-1_arm64.deb ... Unpacking libpixman-1-0:arm64 (0.40.0-1) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../052-libxau6_1%3a1.0.9-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.9-1) ... Selecting previously unselected package libmd0:arm64. Preparing to unpack .../053-libmd0_1.0.3-3_arm64.deb ... Unpacking libmd0:arm64 (1.0.3-3) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../054-libbsd0_0.11.3-1_arm64.deb ... Unpacking libbsd0:arm64 (0.11.3-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../055-libxdmcp6_1%3a1.1.2-3_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../056-libxcb1_1.14-3_arm64.deb ... Unpacking libxcb1:arm64 (1.14-3) ... Selecting previously unselected package libx11-data. Preparing to unpack .../057-libx11-data_2%3a1.7.1-1_all.deb ... Unpacking libx11-data (2:1.7.1-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../058-libx11-6_2%3a1.7.1-1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.7.1-1) ... Selecting previously unselected package libxcb-render0:arm64. Preparing to unpack .../059-libxcb-render0_1.14-3_arm64.deb ... Unpacking libxcb-render0:arm64 (1.14-3) ... Selecting previously unselected package libxcb-shm0:arm64. Preparing to unpack .../060-libxcb-shm0_1.14-3_arm64.deb ... Unpacking libxcb-shm0:arm64 (1.14-3) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../061-libxext6_2%3a1.3.3-1.1_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.3-1.1) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../062-libxrender1_1%3a0.9.10-1_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:arm64. Preparing to unpack .../063-libcairo2_1.16.0-5_arm64.deb ... Unpacking libcairo2:arm64 (1.16.0-5) ... Selecting previously unselected package libsasl2-modules-db:arm64. 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Setting up libjs-json (0~20190826+~1.0.5-2) ... Setting up libgraphite2-3:arm64 (1.3.14-1) ... Setting up libpixman-1-0:arm64 (0.40.0-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libxau6:arm64 (1:1.0.9-1) ... Setting up libpsl5:arm64 (0.21.0-1.2) ... Setting up libboost1.74-dev:arm64 (1.74.0-9) ... Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libpcre16-3:arm64 (2:8.39-13) ... Setting up libicu67:arm64 (67.1-7) ... Setting up libdynaloader-functions-perl (0.003-1.1) ... Setting up libdatrie1:arm64 (0.2.13-1) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libsub-identify-perl (0.14-1+b3) ... Setting up libglib2.0-0:arm64 (2.66.8-1) ... No schema files found: doing nothing. Setting up libjs-sifter.js (0.6.0+dfsg-1) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Setting up unzip (6.0-26) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b2) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libgdk-pixbuf2.0-common (2.42.2+dfsg-1) ... Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.30-1) ... Setting up node-html5shiv (3.7.3+dfsg-3) ... Setting up libnghttp2-14:arm64 (1.43.0-1) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up libdeflate0:arm64 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up libencode-locale-perl (1.05-1.1) ... Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... Setting up file (1:5.39-3) ... Setting up libjbig0:arm64 (2.1-3.1+b2) ... Setting up libpcre2-16-0:arm64 (10.36-2) ... Setting up libsub-install-perl (0.928-1.1) ... Setting up libjs-es5-shim (4.5.15-1) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2.1) ... Setting up zip (3.0-12) ... Setting up libpackage-stash-xs-perl (0.29-1+b2) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libpcre2-32-0:arm64 (10.36-2) ... Setting up libblas3:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libuv1:arm64 (1.40.0-1) ... Setting up libalgorithm-c3-perl (0.11-1) ... Setting up libjpeg62-turbo:arm64 (1:2.0.6-4) ... Setting up libswitch-perl (2.17-2.1) ... Setting up libx11-data (2:1.7.1-1) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.0.6-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:arm64 (6.2+20201114-2) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up libfribidi0:arm64 (1.0.8-2) ... Setting up libjs-d3 (3.5.17-4) ... Setting up libpng16-16:arm64 (1.6.37-3) ... Setting up libpcre32-3:arm64 (2:8.39-13) ... Setting up libvariable-magic-perl (0.62-1+b3) ... Setting up libio-html-perl (1.004-2) ... Setting up libtcl8.6:arm64 (8.6.11+dfsg-1) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:arm64 (0.6.1-2.1) ... Setting up libb-hooks-op-check-perl (0.22-1+b3) ... Setting up icu-devtools (67.1-7) ... Setting up pkg-config (0.29.2-1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libpcre2-posix2:arm64 (10.36-2) ... Setting up libparams-util-perl (1.102-1+b1) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2.1) ... Setting up libgfortran5:arm64 (10.2.1-6) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up liblzma-dev:arm64 (5.2.5-2) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Setting up libmd0:arm64 (1.0.3-3) ... Setting up libjs-highlight.js (9.18.5+dfsg1-1) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libthai-data (0.1.28-3) ... Setting up libgfortran-10-dev:arm64 (10.2.1-6) ... Setting up libdevel-globaldestruction-perl (0.14-1.1) ... Setting up libssh2-1:arm64 (1.9.0-2) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libboost-dev:arm64 (1.74.0.3) ... Setting up libtiff5:arm64 (4.2.0-1) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up openssl (1.1.1k-1) ... Setting up libbsd0:arm64 (0.11.3-1) ... Setting up node-normalize.css (8.0.1-3) ... Setting up libelf1:arm64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libicu-dev:arm64 (67.1-7) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liburi-perl (5.08-1) ... Setting up libblas-dev:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up dctrl-tools (2.24-3) ... Setting up libjs-bootstrap (3.4.1+dfsg-2) ... Setting up libbz2-dev:arm64 (1.0.8-4) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up r-cran-bh (1.74.0-1) ... Setting up libice6:arm64 (2:1.0.10-1) ... Setting up libhttp-date-perl (6.05-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up liblapack3:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libncurses-dev:arm64 (6.2+20201114-2) ... Setting up libxcb1:arm64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libpcre2-dev:arm64 (10.36-2) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:arm64 (1.14-3) ... Setting up libpcre3-dev:arm64 (2:8.39-13) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libpng-dev:arm64 (1.6.37-3) ... Setting up libjpeg-dev:arm64 (1:2.0.6-4) ... Setting up libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libcurl3-gnutls:arm64 (7.74.0-1.3+b1) ... Setting up libxcb-shm0:arm64 (1.14-3) ... Setting up libclass-c3-perl (0.35-1) ... Setting up libreadline-dev:arm64 (8.1-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libjs-jquery-datatables (1.10.21+dfsg-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libthai0:arm64 (0.1.28-3) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libfreetype6:arm64 (2.10.4+dfsg-1) ... Setting up shared-mime-info (2.0-1) ... Setting up liblapack-dev:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up gfortran-10 (10.2.1-6) ... Setting up libdata-optlist-perl (0.110-1.1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libncurses5-dev:arm64 (6.2+20201114-2) ... Setting up libcurl4:arm64 (7.74.0-1.3+b1) ... Setting up libx11-6:arm64 (2:1.7.1-1) ... Setting up libharfbuzz0b:arm64 (2.7.4-1) ... Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.2+dfsg-1) ... Setting up libmro-compat-perl (0.13-1) ... Setting up libsm6:arm64 (2:1.2.3-1) ... Setting up libxmuu1:arm64 (2:1.1.2-2+b3) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libhttp-message-perl (6.28-1) ... Setting up libeval-closure-perl (0.14-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpaper1:arm64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libxext6:arm64 (2:1.3.3-1.1) ... Setting up libwww-curl-perl (4.17-7+b1) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up dh-autoreconf (20) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdist-checkconflicts-perl (0.11-1.1) ... Setting up libxt6:arm64 (1:1.2.0-1) ... Setting up xauth (1:1.1-1) ... Setting up libxss1:arm64 (1:1.2.3-1) ... Setting up libfontconfig1:arm64 (2.13.1-4.2) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libxft2:arm64 (2.3.2-2) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libtk8.6:arm64 (8.6.11-2) ... Setting up libpango-1.0-0:arm64 (1.46.2-3) ... Setting up debhelper (13.3.4) ... Setting up libmodule-runtime-conflicts-perl (0.003-1.1) ... Setting up libcairo2:arm64 (1.16.0-5) ... Setting up libclass-load-perl (0.25-1) ... Setting up libpackage-deprecationmanager-perl (0.17-1.1) ... Setting up libdevel-overloadinfo-perl (0.005-1) ... Setting up libclass-load-xs-perl (0.10-1+b5) ... Setting up libcairo-gobject2:arm64 (1.16.0-5) ... Setting up libpangoft2-1.0-0:arm64 (1.46.2-3) ... Setting up libb-hooks-endofscope-perl (0.24-1.1) ... Setting up libpangocairo-1.0-0:arm64 (1.46.2-3) ... Setting up libmoose-perl (2.2014-2) ... Setting up librsvg2-2:arm64 (2.50.3+dfsg-1) ... Setting up r-base-core (4.0.4-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.4.0-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up r-cran-gtable (0.3.0+dfsg-2) ... Setting up r-cran-labeling (0.4.2-1) ... Setting up r-cran-sourcetools (0.1.7-3) ... Setting up r-cran-rsvg (2.1-1) ... Setting up r-cran-lattice (0.20-41-1+b1) ... Setting up r-cran-ps (1.5.0-1) ... Setting up r-cran-nlme (3.1.152-1) ... Setting up r-cran-farver (2.0.3-1+b1) ... Setting up r-cran-viridislite (0.3.0-4) ... Setting up r-cran-lazyeval (0.2.2-1+b1) ... Setting up r-cran-commonmark (1.7-2) ... Setting up r-cran-r6 (2.5.0-1) ... Setting up r-cran-pkgkitten (0.2.1-1) ... Setting up r-cran-magrittr (2.0.1-1) ... Setting up r-cran-littler (0.3.12-1) ... Setting up r-cran-rcpp (1.0.6-1) ... Setting up r-cran-brio (1.1.1-1) ... Setting up r-cran-diffobj (0.3.2-1) ... Setting up r-bioc-biocgenerics (0.36.0-1) ... Setting up r-cran-rlang (0.4.10-1) ... Setting up r-base-dev (4.0.4-1) ... Setting up r-cran-assertthat (0.2.1-2) ... Setting up libwww-curl-simple-perl (0.100191-2) ... Setting up r-cran-withr (2.4.1-1) ... Setting up r-cran-processx (3.4.5-1) ... Setting up r-cran-mime (0.9-1+b1) ... Setting up r-cran-praise (1.0.0-4) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-digest (0.6.27-1) ... Setting up r-cran-yaml (2.2.1-1+b1) ... Setting up r-cran-evaluate (0.14-2) ... Setting up r-cran-dbi (1.1.1-1) ... Setting up r-cran-prettyunits (1.1.1-2) ... Setting up r-cran-fansi (0.4.2-1) ... Setting up r-cran-mass (7.3-53.1-1) ... Setting up r-cran-glue (1.4.2-1) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up r-cran-cli (2.3.0-1) ... Setting up r-cran-lifecycle (0.2.0-2) ... Setting up r-cran-bitops (1.0-6-5) ... Setting up r-cran-rprojroot (2.0.2-1) ... Setting up r-cran-fastmap (1.1.0-1) ... Setting up r-cran-png (0.1-7-4) ... Setting up r-cran-jsonlite (1.7.2+dfsg-1) ... Setting up r-cran-rstudioapi (0.13-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up r-cran-utf8 (1.1.4-2) ... Setting up r-cran-colorspace (2.0-0+dfsg-1) ... Setting up r-cran-rcolorbrewer (1.1-2-3) ... Setting up r-cran-runit (0.4.32-3) ... Setting up r-cran-gridextra (2.3-3) ... Setting up r-cran-later (1.1.0.1+dfsg-1) ... Setting up r-cran-matrix (1.3-2-1) ... Setting up r-cran-htmltools (0.5.1.1-1) ... Setting up r-cran-mgcv (1.8-34-1) ... Setting up dh-r (20210303) ... Setting up r-cran-rjson (0.2.20-2) ... Setting up r-cran-rcurl (1.98-1.2-1+b1) ... Setting up r-cran-ellipsis (0.3.1-1) ... Setting up r-cran-callr (3.5.1-1) ... Setting up r-cran-desc (1.2.0-3) ... Setting up r-cran-munsell (0.5.0-2) ... Setting up r-cran-htmlwidgets (1.5.3+dfsg-1) ... Setting up r-cran-scales (1.1.1-1) ... Setting up r-cran-promises (1.1.1+dfsg-1) ... Setting up r-cran-pkgbuild (1.2.0-1) ... Setting up r-cran-vctrs (0.3.6-1) ... Setting up r-cran-pillar (1.4.7-1) ... Setting up r-cran-pkgload (1.1.0-1) ... Setting up r-cran-httpuv (1.5.5+dfsg-1) ... Setting up r-cran-tibble (3.0.6+dfsg-1) ... Setting up r-cran-shiny (1.5.0+dfsg-2) ... Setting up r-cran-crosstalk (1.1.1+dfsg-2) ... Setting up r-cran-dt (0.17+dfsg-3) ... Setting up r-cran-rematch2 (2.1.2-2) ... Setting up r-cran-waldo (0.2.3-2) ... Setting up r-cran-testthat (3.0.1-1) ... Setting up r-cran-isoband (0.2.3-2) ... Setting up r-cran-ggplot2 (3.3.3+dfsg-1) ... Setting up r-bioc-chemminer (3.42.1+dfsg-1) ... Processing triggers for libc-bin (2.31-12) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl The following NEW packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 59.5 kB of archives. After this operation, 157 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main arm64 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:2 http://deb.debian.org/debian bullseye/main arm64 libtext-glob-perl all 0.11-1 [8888 B] Get:3 http://deb.debian.org/debian bullseye/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:4 http://deb.debian.org/debian bullseye/main arm64 usrmerge all 25 [13.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.5 kB in 0s (2768 kB/s) Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50481 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package usrmerge. Preparing to unpack .../archives/usrmerge_25_all.deb ... Unpacking usrmerge (25) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up usrmerge (25) ... The system has been successfully converted. Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. I: Building the package hostname: Temporary failure in name resolution I: Running cd /build/r-bioc-fmcsr-1.32.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../r-bioc-fmcsr_1.32.0+dfsg-1_source.changes dpkg-buildpackage: info: source package r-bioc-fmcsr dpkg-buildpackage: info: source version 1.32.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dylan Aïssi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R dh_auto_test -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R dh_auto_install -O--buildsystem=R I: R Package: fmcsR Version: 1.32.0 I: Building using R version 4.0.4-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Sun, 01 Nov 2020 17:39:46 +0100 mkdir -p /build/r-bioc-fmcsr-1.32.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library R CMD INSTALL -l /build/r-bioc-fmcsr-1.32.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library --clean . "--built-timestamp='Sun, 01 Nov 2020 17:39:46 +0100'" * installing *source* package 'fmcsR' ... ** using staged installation checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for size_t... yes checking for alarm... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating config.h config.status: config.h is unchanged ** libs make[1]: Entering directory '/build/r-bioc-fmcsr-1.32.0+dfsg/src' g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-87i4cL/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCS.cpp -o MCS.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-87i4cL/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCSCompound.cpp -o MCSCompound.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-87i4cL/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCSMap.cpp -o MCSMap.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-87i4cL/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCSRingDetector.cpp -o MCSRingDetector.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-87i4cL/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fmcs_R_wrap.cpp -o fmcs_R_wrap.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-87i4cL/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.cpp -o util.o g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-z,relro -o fmcsR.so MCS.o MCSCompound.o MCSMap.o MCSRingDetector.o fmcs_R_wrap.o util.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/r-bioc-fmcsr-1.32.0+dfsg/src' make[1]: Entering directory '/build/r-bioc-fmcsr-1.32.0+dfsg/src' make[1]: Leaving directory '/build/r-bioc-fmcsr-1.32.0+dfsg/src' installing to /build/r-bioc-fmcsr-1.32.0+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library/00LOCK-r-bioc-fmcsr-1.32.0+dfsg/00new/fmcsR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fmcsR) Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 299. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 303. W: Ignoring specified R dependency: R (>= 2.10.0) I: Using r-bioc-chemminer for Depends:ChemmineR I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:knitcitations W: Cannot find a debian package for Suggests:knitrBootstrap I: Using r-cran-runit for Imports:RUnit I: Using r-bioc-chemminer for Imports:ChemmineR I: Using r-bioc-biocgenerics for Imports:BiocGenerics I: BioConductor API version: r-api-bioc-3.12 I: Use r-bioc-fmcsr as Debian binary package for variables substitution dh_installdocs -O--buildsystem=R dh_installchangelogs -O--buildsystem=R dh_installsystemduser -O--buildsystem=R dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R dh_compress -O--buildsystem=R dh_fixperms -O--buildsystem=R dh_missing -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -O--buildsystem=R dh_gencontrol -O--buildsystem=R dh_md5sums -O--buildsystem=R dh_builddeb -O--buildsystem=R dpkg-deb: building package 'r-bioc-fmcsr' in '../r-bioc-fmcsr_1.32.0+dfsg-1_arm64.deb'. dpkg-deb: building package 'r-bioc-fmcsr-dbgsym' in '../r-bioc-fmcsr-dbgsym_1.32.0+dfsg-1_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../r-bioc-fmcsr_1.32.0+dfsg-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/12400/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/12400/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/12400 and its subdirectories I: Current time: Fri Jul 9 14:04:20 +14 2021 I: pbuilder-time-stamp: 1625789060