I: pbuilder: network access will be disabled during build I: Current time: Sat Aug 27 15:30:07 +14 2022 I: pbuilder-time-stamp: 1661563807 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenicsx-performance-tests_0.0~git20210119.80e82ac-1.dsc] I: copying [./fenicsx-performance-tests_0.0~git20210119.80e82ac.orig.tar.gz] I: copying [./fenicsx-performance-tests_0.0~git20210119.80e82ac-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.URZ7K8wa/trustedkeys.kbx': General error gpgv: Signature made Sat Feb 13 05:42:28 2021 +14 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fenicsx-performance-tests_0.0~git20210119.80e82ac-1.dsc dpkg-source: info: extracting fenicsx-performance-tests in fenicsx-performance-tests-0.0~git20210119.80e82ac dpkg-source: info: unpacking fenicsx-performance-tests_0.0~git20210119.80e82ac.orig.tar.gz dpkg-source: info: unpacking fenicsx-performance-tests_0.0~git20210119.80e82ac-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/22285/tmp/hooks/D01_modify_environment starting debug: Running on codethink15-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/22285/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/22285/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/var/lib/jenkins HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=22285 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.KevUTSxycz/pbuilderrc_1hLB --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.KevUTSxycz/b2 --logfile b2/build.log --extrapackages usrmerge fenicsx-performance-tests_0.0~git20210119.80e82ac-1.dsc' SUDO_GID=117 SUDO_UID=110 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root USERNAME=root _='I: set' http_proxy=http://192.168.101.16:3128 I: uname -a Linux i-capture-the-hostname 4.15.0-151-generic #157-Ubuntu SMP Fri Jul 9 21:03:48 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Jun 22 2021 bash -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash -rwxr-xr-x 1 root root 101384 Sep 23 2020 date -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd -rwxr-xr-x 1 root root 89824 Sep 23 2020 df -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir -rwxr-xr-x 1 root root 76152 Feb 8 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep -rwxr-xr-x 1 root root 64856 Feb 8 2021 findmnt -rwsr-xr-x 1 root root 34824 Feb 27 2021 fusermount -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe -rwxr-xr-x 1 root root 93744 Mar 3 2021 gzip -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln -rwxr-xr-x 1 root root 52720 Feb 8 2020 login -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls -rwxr-xr-x 1 root root 161960 Feb 8 2021 lsblk -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 51368 Feb 8 2021 more -rwsr-xr-x 1 root root 51360 Feb 8 2021 mount -rwxr-xr-x 1 root root 14496 Feb 8 2021 mountpoint -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Jun 22 2021 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Aug 27 15:30 sh -> bash lrwxrwxrwx 1 root root 4 Aug 27 05:47 sh.distrib -> dash -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty -rwsr-xr-x 1 root root 67776 Feb 8 2021 su -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch -rwxr-xr-x 1 root root 31512 Sep 23 2020 true -rwxr-xr-x 1 root root 14264 Feb 27 2021 ulockmgr_server -rwsr-xr-x 1 root root 30880 Feb 8 2021 umount -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir -rwxr-xr-x 1 root root 59584 Feb 8 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew I: user script /srv/workspace/pbuilder/22285/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libboost-dev, libdolfinx-dev (>= 2019.2.0~git20210130.c14cb0a~), mpi-default-dev, python3-ffcx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-dev (>= 2019.2.0~git20210130.c14cb0a~); however: Package libdolfinx-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx; however: Package python3-ffcx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libamd2{a} libarchive-zip-perl{a} libarchive13{a} libarpack2{a} libarpack2-dev{a} libbasix-dev{a} libbasix0{a} libblas-dev{a} libblas3{a} libboost-atomic1.74-dev{a} libboost-atomic1.74.0{a} libboost-chrono-dev{a} libboost-chrono1.74-dev{a} libboost-chrono1.74.0{a} libboost-date-time1.74-dev{a} libboost-date-time1.74.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.74-dev{a} libboost-filesystem1.74.0{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-math-dev{a} libboost-math1.74-dev{a} libboost-math1.74.0{a} libboost-mpi-dev{a} libboost-mpi1.74-dev{a} libboost-mpi1.74.0{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-serialization-dev{a} libboost-serialization1.74-dev{a} libboost-serialization1.74.0{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-thread-dev{a} libboost-thread1.74-dev{a} libboost-thread1.74.0{a} libboost-timer-dev{a} libboost-timer1.74-dev{a} libboost-timer1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libbtf1{a} libcamd2{a} libcbor0{a} libccolamd2{a} libcholmod3{a} libcolamd2{a} libcombblas1.16.0{a} libcurl4{a} libcxsparse3{a} libdebhelper-perl{a} libdolfinx-dev{a} libdolfinx-real-dev{a} libdolfinx-real2019.2{a} libedit2{a} libeigen3-dev{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libexpat1{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libgraphblas3{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1{a} libhdf5-openmpi-cpp-103-1{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102{a} libhdf5-openmpi-hl-100{a} libhdf5-openmpi-hl-cpp-100{a} libhdf5-openmpi-hl-fortran-100{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre{a} libhypre-dev{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjsoncpp24{a} libklu1{a} liblapack-dev{a} liblapack3{a} libldap-2.4-2{a} libldl2{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmetis5{a} libmongoose2{a} libmpdec3{a} libmumps-5.3{a} libmumps-dev{a} libmumps-headers-dev{a} libncurses6{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libparpack2{a} libparpack2-dev{a} libpciaccess0{a} libpetsc-real3.14{a} libpetsc-real3.14-dev{a} libpetsc3.14-dev-common{a} libpipeline1{a} libpmix-dev{a} libpmix2{a} libprocps8{a} libpsl5{a} libptscotch-6.1{a} libptscotch-dev{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} librbio2{a} librdmacm1{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.1{a} libscotch-6.1{a} libscotch-dev{a} libsigsegv2{a} libslepc-real3.14{a} libslepc-real3.14-dev{a} libsliplu1{a} libspqr2{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsuitesparse-dev{a} libsuitesparseconfig5{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist6{a} libsuperlu5{a} libsz2{a} libtool{a} libuchardet0{a} libucx0{a} libumfpack5{a} libuv1{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} procps{a} python3{a} python3-basix{a} python3-cffi{a} python3-cffi-backend{a} python3-ffcx{a} python3-fiat{a} python3-minimal{a} python3-mpmath{a} python3-numpy{a} python3-pkg-resources{a} python3-ply{a} python3-pycparser{a} python3-sympy{a} python3-ufl{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common ksh libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libgl1-mesa-dev libglib2.0-data libgpm2 libldap-common libmail-sendmail-perl libpetsc3.14-dev-examples libsasl2-modules lynx mksh psmisc publicsuffix python3-pil shared-mime-info wget xauth xdg-user-dirs zsh 0 packages upgraded, 248 newly installed, 0 to remove and 0 not upgraded. Need to get 150 MB of archives. After unpacking 870 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-minimal arm64 3.9.2-1 [797 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 python3.9-minimal arm64 3.9.2-1 [1884 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 python3-minimal arm64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmpdec3 arm64 2.5.1-1 [84.4 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-stdlib arm64 3.9.2-1 [1658 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 python3.9 arm64 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libpython3-stdlib arm64 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 python3 arm64 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 libprocps8 arm64 2:3.3.17-5 [61.9 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 procps arm64 2:3.3.17-5 [497 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libmd0 arm64 1.0.3-3 [27.9 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libbsd0 arm64 0.11.3-1 [106 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 libedit2 arm64 3.1-20191231-2+b1 [92.1 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libcbor0 arm64 0.5.0+dfsg-2 [20.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 libfido2-1 arm64 1.6.0-2 [50.2 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 openssh-client arm64 1:8.4p1-5 [892 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 cmake-data all 3.18.4-2 [1725 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libarchive13 arm64 3.4.3-2+b1 [320 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2.1 [69.3 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2.1 [105 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libldap-2.4-2 arm64 2.4.57+dfsg-3 [222 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 libssh2-1 arm64 1.9.0-2 [150 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 libcurl4 arm64 7.74.0-1.3+b1 [321 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libjsoncpp24 arm64 1.9.4-4 [72.5 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 librhash0 arm64 1.4.1-2 [127 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libuv1 arm64 1.40.0-2 [126 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 cmake arm64 3.18.4-2 [3673 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 gfortran arm64 4:10.2.1-1 [1424 B] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libnl-3-200 arm64 3.4.0-1+b1 [60.6 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 libnl-route-3-200 arm64 3.4.0-1+b1 [149 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 libibverbs1 arm64 33.2-1 [56.1 kB] Get: 76 http://deb.debian.org/debian bullseye/main arm64 ibverbs-providers arm64 33.2-1 [235 kB] Get: 77 http://deb.debian.org/debian bullseye/main arm64 icu-devtools arm64 67.1-7 [189 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get: 81 http://deb.debian.org/debian bullseye/main arm64 libsuitesparseconfig5 arm64 1:5.8.1+dfsg-2 [22.8 kB] Get: 82 http://deb.debian.org/debian bullseye/main arm64 libamd2 arm64 1:5.8.1+dfsg-2 [33.1 kB] Get: 83 http://deb.debian.org/debian bullseye/main arm64 libblas3 arm64 3.9.0-3 [101 kB] Get: 84 http://deb.debian.org/debian bullseye/main arm64 liblapack3 arm64 3.9.0-3 [1541 kB] Get: 85 http://deb.debian.org/debian bullseye/main arm64 libarpack2 arm64 3.8.0-1 [84.2 kB] Get: 86 http://deb.debian.org/debian bullseye/main arm64 libblas-dev arm64 3.9.0-3 [107 kB] Get: 87 http://deb.debian.org/debian bullseye/main arm64 liblapack-dev arm64 3.9.0-3 [2758 kB] Get: 88 http://deb.debian.org/debian bullseye/main arm64 libarpack2-dev arm64 3.8.0-1 [101 kB] Get: 89 http://deb.debian.org/debian bullseye/main arm64 libbasix0 arm64 0.0.1~git20210122.4f10ef2-2 [169 kB] Get: 90 http://deb.debian.org/debian bullseye/main arm64 libglib2.0-0 arm64 2.66.8-1 [1286 kB] Get: 91 http://deb.debian.org/debian bullseye/main arm64 pkg-config arm64 0.29.2-1 [63.6 kB] Get: 92 http://deb.debian.org/debian bullseye/main arm64 libeigen3-dev all 3.3.9-2 [858 kB] Get: 93 http://deb.debian.org/debian bullseye/main arm64 libbasix-dev arm64 0.0.1~git20210122.4f10ef2-2 [4216 B] Get: 94 http://deb.debian.org/debian bullseye/main arm64 libboost1.74-dev arm64 1.74.0-9 [9534 kB] Get: 95 http://deb.debian.org/debian bullseye/main arm64 libboost-atomic1.74.0 arm64 1.74.0-9 [244 kB] Get: 96 http://deb.debian.org/debian bullseye/main arm64 libboost-atomic1.74-dev arm64 1.74.0-9 [245 kB] Get: 97 http://deb.debian.org/debian bullseye/main arm64 libboost-chrono1.74.0 arm64 1.74.0-9 [251 kB] Get: 98 http://deb.debian.org/debian bullseye/main arm64 libboost-chrono1.74-dev arm64 1.74.0-9 [260 kB] Get: 99 http://deb.debian.org/debian bullseye/main arm64 libboost-chrono-dev arm64 1.74.0.3 [4960 B] Get: 100 http://deb.debian.org/debian bullseye/main arm64 libboost-date-time1.74.0 arm64 1.74.0-9 [241 kB] Get: 101 http://deb.debian.org/debian bullseye/main arm64 libboost-serialization1.74.0 arm64 1.74.0-9 [331 kB] Get: 102 http://deb.debian.org/debian bullseye/main arm64 libboost-serialization1.74-dev arm64 1.74.0-9 [381 kB] Get: 103 http://deb.debian.org/debian bullseye/main arm64 libboost-date-time1.74-dev arm64 1.74.0-9 [250 kB] Get: 104 http://deb.debian.org/debian bullseye/main arm64 libboost-dev arm64 1.74.0.3 [4548 B] Get: 105 http://deb.debian.org/debian bullseye/main arm64 libboost-filesystem1.74.0 arm64 1.74.0-9 [278 kB] Get: 106 http://deb.debian.org/debian bullseye/main arm64 libboost-system1.74.0 arm64 1.74.0-9 [242 kB] Get: 107 http://deb.debian.org/debian bullseye/main arm64 libboost-system1.74-dev arm64 1.74.0-9 [243 kB] Get: 108 http://deb.debian.org/debian bullseye/main arm64 libboost-filesystem1.74-dev arm64 1.74.0-9 [303 kB] Get: 109 http://deb.debian.org/debian bullseye/main arm64 libboost-filesystem-dev arm64 1.74.0.3 [4368 B] Get: 110 http://deb.debian.org/debian bullseye/main arm64 libboost-regex1.74.0 arm64 1.74.0-9 [473 kB] Get: 111 http://deb.debian.org/debian bullseye/main arm64 libicu-dev arm64 67.1-7 [9468 kB] Get: 112 http://deb.debian.org/debian bullseye/main arm64 libboost-regex1.74-dev arm64 1.74.0-9 [549 kB] Get: 113 http://deb.debian.org/debian bullseye/main arm64 libboost-iostreams1.74-dev arm64 1.74.0-9 [272 kB] Get: 114 http://deb.debian.org/debian bullseye/main arm64 libboost-iostreams-dev arm64 1.74.0.3 [4316 B] Get: 115 http://deb.debian.org/debian bullseye/main arm64 libboost-math1.74.0 arm64 1.74.0-9 [490 kB] Get: 116 http://deb.debian.org/debian bullseye/main arm64 libboost-math1.74-dev arm64 1.74.0-9 [581 kB] Get: 117 http://deb.debian.org/debian bullseye/main arm64 libboost-math-dev arm64 1.74.0.3 [4532 B] Get: 118 http://deb.debian.org/debian bullseye/main arm64 libevent-core-2.1-7 arm64 2.1.12-stable-1 [132 kB] Get: 119 http://deb.debian.org/debian bullseye/main arm64 libevent-pthreads-2.1-7 arm64 2.1.12-stable-1 [57.2 kB] Get: 120 http://deb.debian.org/debian bullseye/main arm64 librdmacm1 arm64 33.2-1 [65.3 kB] Get: 121 http://deb.debian.org/debian bullseye/main arm64 libfabric1 arm64 1.11.0-2 [389 kB] Get: 122 http://deb.debian.org/debian bullseye/main arm64 libhwloc15 arm64 2.4.1+dfsg-1 [131 kB] Get: 123 http://deb.debian.org/debian bullseye/main arm64 libpciaccess0 arm64 0.16-1 [52.9 kB] Get: 124 http://deb.debian.org/debian bullseye/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 125 http://deb.debian.org/debian bullseye/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 126 http://deb.debian.org/debian bullseye/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get: 127 http://deb.debian.org/debian bullseye/main arm64 libx11-data all 2:1.7.1-1 [310 kB] Get: 128 http://deb.debian.org/debian bullseye/main arm64 libx11-6 arm64 2:1.7.1-1 [747 kB] Get: 129 http://deb.debian.org/debian bullseye/main arm64 libxext6 arm64 2:1.3.3-1.1 [51.6 kB] Get: 130 http://deb.debian.org/debian bullseye/main arm64 libxnvctrl0 arm64 460.73.01-1 [26.7 kB] Get: 131 http://deb.debian.org/debian bullseye/main arm64 ocl-icd-libopencl1 arm64 2.2.14-2 [41.5 kB] Get: 132 http://deb.debian.org/debian bullseye/main arm64 libhwloc-plugins arm64 2.4.1+dfsg-1 [21.1 kB] Get: 133 http://deb.debian.org/debian bullseye/main arm64 libpmix2 arm64 4.0.0-4 [513 kB] Get: 134 http://deb.debian.org/debian bullseye/main arm64 libnuma1 arm64 2.0.12-1+b1 [25.8 kB] Get: 135 http://deb.debian.org/debian bullseye/main arm64 libucx0 arm64 1.10.1~rc1+really.1.10.0-1 [567 kB] Get: 136 http://deb.debian.org/debian bullseye/main arm64 libopenmpi3 arm64 4.1.0-10 [2152 kB] Get: 137 http://deb.debian.org/debian bullseye/main arm64 libboost-mpi1.74.0 arm64 1.74.0-9 [277 kB] Get: 138 http://deb.debian.org/debian bullseye/main arm64 openmpi-common all 4.1.0-10 [179 kB] Get: 139 http://deb.debian.org/debian bullseye/main arm64 libnl-3-dev arm64 3.4.0-1+b1 [104 kB] Get: 140 http://deb.debian.org/debian bullseye/main arm64 libnl-route-3-dev arm64 3.4.0-1+b1 [176 kB] Get: 141 http://deb.debian.org/debian bullseye/main arm64 libibverbs-dev arm64 33.2-1 [480 kB] Get: 142 http://deb.debian.org/debian bullseye/main arm64 libnuma-dev arm64 2.0.12-1+b1 [40.2 kB] Get: 143 http://deb.debian.org/debian bullseye/main arm64 libltdl7 arm64 2.4.6-15 [390 kB] Get: 144 http://deb.debian.org/debian bullseye/main arm64 libltdl-dev arm64 2.4.6-15 [162 kB] Get: 145 http://deb.debian.org/debian bullseye/main arm64 libhwloc-dev arm64 2.4.1+dfsg-1 [217 kB] Get: 146 http://deb.debian.org/debian bullseye/main arm64 libevent-2.1-7 arm64 2.1.12-stable-1 [176 kB] Get: 147 http://deb.debian.org/debian bullseye/main arm64 libevent-extra-2.1-7 arm64 2.1.12-stable-1 [105 kB] Get: 148 http://deb.debian.org/debian bullseye/main arm64 libevent-openssl-2.1-7 arm64 2.1.12-stable-1 [63.1 kB] Get: 149 http://deb.debian.org/debian bullseye/main arm64 libevent-dev arm64 2.1.12-stable-1 [309 kB] Get: 150 http://deb.debian.org/debian bullseye/main arm64 libpmix-dev arm64 4.0.0-4 [667 kB] Get: 151 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 152 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 153 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 154 http://deb.debian.org/debian bullseye/main arm64 openmpi-bin arm64 4.1.0-10 [237 kB] Get: 155 http://deb.debian.org/debian bullseye/main arm64 libopenmpi-dev arm64 4.1.0-10 [1192 kB] Get: 156 http://deb.debian.org/debian bullseye/main arm64 mpi-default-dev arm64 1.13 [5476 B] Get: 157 http://deb.debian.org/debian bullseye/main arm64 libboost-mpi1.74-dev arm64 1.74.0-9 [303 kB] Get: 158 http://deb.debian.org/debian bullseye/main arm64 libboost-mpi-dev arm64 1.74.0.3 [4420 B] Get: 159 http://deb.debian.org/debian bullseye/main arm64 libboost-program-options1.74.0 arm64 1.74.0-9 [344 kB] Get: 160 http://deb.debian.org/debian bullseye/main arm64 libboost-program-options1.74-dev arm64 1.74.0-9 [382 kB] Get: 161 http://deb.debian.org/debian bullseye/main arm64 libboost-program-options-dev arm64 1.74.0.3 [4340 B] Get: 162 http://deb.debian.org/debian bullseye/main arm64 libboost-serialization-dev arm64 1.74.0.3 [4560 B] Get: 163 http://deb.debian.org/debian bullseye/main arm64 libboost-thread1.74.0 arm64 1.74.0-9 [276 kB] Get: 164 http://deb.debian.org/debian bullseye/main arm64 libboost-thread1.74-dev arm64 1.74.0-9 [291 kB] Get: 165 http://deb.debian.org/debian bullseye/main arm64 libboost-thread-dev arm64 1.74.0.3 [4356 B] Get: 166 http://deb.debian.org/debian bullseye/main arm64 libboost-timer1.74.0 arm64 1.74.0-9 [250 kB] Get: 167 http://deb.debian.org/debian bullseye/main arm64 libboost-timer1.74-dev arm64 1.74.0-9 [254 kB] Get: 168 http://deb.debian.org/debian bullseye/main arm64 libboost-timer-dev arm64 1.74.0.3 [4456 B] Get: 169 http://deb.debian.org/debian bullseye/main arm64 libbtf1 arm64 1:5.8.1+dfsg-2 [24.4 kB] Get: 170 http://deb.debian.org/debian bullseye/main arm64 libcamd2 arm64 1:5.8.1+dfsg-2 [33.9 kB] Get: 171 http://deb.debian.org/debian bullseye/main arm64 libccolamd2 arm64 1:5.8.1+dfsg-2 [36.6 kB] Get: 172 http://deb.debian.org/debian bullseye/main arm64 libcolamd2 arm64 1:5.8.1+dfsg-2 [31.0 kB] Get: 173 http://deb.debian.org/debian bullseye/main arm64 libmetis5 arm64 5.1.0.dfsg-7 [154 kB] Get: 174 http://deb.debian.org/debian bullseye/main arm64 libcholmod3 arm64 1:5.8.1+dfsg-2 [290 kB] Get: 175 http://deb.debian.org/debian bullseye/main arm64 libcombblas1.16.0 arm64 1.6.2-6 [276 kB] Get: 176 http://deb.debian.org/debian bullseye/main arm64 libcxsparse3 arm64 1:5.8.1+dfsg-2 [72.4 kB] Get: 177 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-103-1 arm64 1.10.6+repack-4 [1067 kB] Get: 178 http://deb.debian.org/debian bullseye/main arm64 libfftw3-double3 arm64 3.3.8-2 [385 kB] Get: 179 http://deb.debian.org/debian bullseye/main arm64 libfftw3-long3 arm64 3.3.8-2 [526 kB] Get: 180 http://deb.debian.org/debian bullseye/main arm64 libfftw3-single3 arm64 3.3.8-2 [630 kB] Get: 181 http://deb.debian.org/debian bullseye/main arm64 libfftw3-mpi3 arm64 3.3.8-2 [60.8 kB] Get: 182 http://deb.debian.org/debian bullseye/main arm64 libsuperlu-dist6 arm64 6.2.0+dfsg1-3 [361 kB] Get: 183 http://deb.debian.org/debian bullseye/main arm64 libhypre arm64 2.18.2-1 [1242 kB] Get: 184 http://deb.debian.org/debian bullseye/main arm64 libklu1 arm64 1:5.8.1+dfsg-2 [75.4 kB] Get: 185 http://deb.debian.org/debian bullseye/main arm64 mpi-default-bin arm64 1.13 [4672 B] Get: 186 http://deb.debian.org/debian bullseye/main arm64 libscalapack-openmpi2.1 arm64 2.1.0-4 [1156 kB] Get: 187 http://deb.debian.org/debian bullseye/main arm64 libmumps-5.3 arm64 5.3.5-2 [1391 kB] Get: 188 http://deb.debian.org/debian bullseye/main arm64 libptscotch-6.1 arm64 6.1.0-2 [559 kB] Get: 189 http://deb.debian.org/debian bullseye/main arm64 libsuperlu5 arm64 5.2.2+dfsg1-2 [133 kB] Get: 190 http://deb.debian.org/debian bullseye/main arm64 libumfpack5 arm64 1:5.8.1+dfsg-2 [201 kB] Get: 191 http://deb.debian.org/debian bullseye/main arm64 libpetsc-real3.14 arm64 3.14.5+dfsg1-4 [4338 kB] Get: 192 http://deb.debian.org/debian bullseye/main arm64 libparpack2 arm64 3.8.0-1 [79.0 kB] Get: 193 http://deb.debian.org/debian bullseye/main arm64 libslepc-real3.14 arm64 3.14.2+dfsg1-1 [786 kB] Get: 194 http://deb.debian.org/debian bullseye/main arm64 libdolfinx-real2019.2 arm64 2019.2.0~git20210130.c14cb0a-5 [571 kB] Get: 195 http://deb.debian.org/debian bullseye/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 196 http://deb.debian.org/debian bullseye/main arm64 libpetsc3.14-dev-common all 3.14.5+dfsg1-4 [206 kB] Get: 197 http://deb.debian.org/debian bullseye/main arm64 libgraphblas3 arm64 1:5.8.1+dfsg-2 [3762 kB] Get: 198 http://deb.debian.org/debian bullseye/main arm64 libldl2 arm64 1:5.8.1+dfsg-2 [24.0 kB] Get: 199 http://deb.debian.org/debian bullseye/main arm64 libmongoose2 arm64 1:5.8.1+dfsg-2 [43.5 kB] Get: 200 http://deb.debian.org/debian bullseye/main arm64 librbio2 arm64 1:5.8.1+dfsg-2 [37.8 kB] Get: 201 http://deb.debian.org/debian bullseye/main arm64 libspqr2 arm64 1:5.8.1+dfsg-2 [74.3 kB] Get: 202 http://deb.debian.org/debian bullseye/main arm64 libsliplu1 arm64 1:5.8.1+dfsg-2 [45.6 kB] Get: 203 http://deb.debian.org/debian bullseye/main arm64 libsuitesparse-dev arm64 1:5.8.1+dfsg-2 [4032 kB] Get: 204 http://deb.debian.org/debian bullseye/main arm64 libsuperlu-dev arm64 5.2.2+dfsg1-2 [21.4 kB] Get: 205 http://deb.debian.org/debian bullseye/main arm64 libhypre-dev arm64 2.18.2-1 [154 kB] Get: 206 http://deb.debian.org/debian bullseye/main arm64 libscotch-6.1 arm64 6.1.0-2 [337 kB] Get: 207 http://deb.debian.org/debian bullseye/main arm64 libscotch-dev arm64 6.1.0-2 [1351 kB] Get: 208 http://deb.debian.org/debian bullseye/main arm64 libptscotch-dev arm64 6.1.0-2 [1180 kB] Get: 209 http://deb.debian.org/debian bullseye/main arm64 libscalapack-openmpi-dev arm64 2.1.0-4 [13.7 kB] Get: 210 http://deb.debian.org/debian bullseye/main arm64 libscalapack-mpi-dev arm64 2.1.0-4 [9732 B] Get: 211 http://deb.debian.org/debian bullseye/main arm64 libmumps-headers-dev all 5.3.5-2 [34.1 kB] Get: 212 http://deb.debian.org/debian bullseye/main arm64 libmumps-dev arm64 5.3.5-2 [1383 kB] Get: 213 http://deb.debian.org/debian bullseye/main arm64 libfftw3-bin arm64 3.3.8-2 [47.4 kB] Get: 214 http://deb.debian.org/debian bullseye/main arm64 libfftw3-dev arm64 3.3.8-2 [1455 kB] Get: 215 http://deb.debian.org/debian bullseye/main arm64 libfftw3-mpi-dev arm64 3.3.8-2 [62.1 kB] Get: 216 http://deb.debian.org/debian bullseye/main arm64 libssl-dev arm64 1.1.1k-1 [1689 kB] Get: 217 http://deb.debian.org/debian bullseye/main arm64 opencl-c-headers all 3.0~2020.12.18-1 [41.8 kB] Get: 218 http://deb.debian.org/debian bullseye/main arm64 opencl-clhpp-headers all 3.0~2.0.13-1 [41.5 kB] Get: 219 http://deb.debian.org/debian bullseye/main arm64 ocl-icd-opencl-dev arm64 2.2.14-2 [11.3 kB] Get: 220 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-fortran-102 arm64 1.10.6+repack-4 [104 kB] Get: 221 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-hl-100 arm64 1.10.6+repack-4 [78.5 kB] Get: 222 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-hl-fortran-100 arm64 1.10.6+repack-4 [55.1 kB] Get: 223 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-cpp-103-1 arm64 1.10.6+repack-4 [131 kB] Get: 224 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-hl-cpp-100 arm64 1.10.6+repack-4 [37.6 kB] Get: 225 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 226 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo-dev arm64 1:2.0.6-4 [255 kB] Get: 227 http://deb.debian.org/debian bullseye/main arm64 libjpeg-dev arm64 1:2.0.6-4 [67.8 kB] Get: 228 http://deb.debian.org/debian bullseye/main arm64 libhdf5-openmpi-dev arm64 1.10.6+repack-4 [2607 kB] Get: 229 http://deb.debian.org/debian bullseye/main arm64 libhdf5-mpi-dev arm64 1.10.6+repack-4 [32.5 kB] Get: 230 http://deb.debian.org/debian bullseye/main arm64 libsuperlu-dist-dev arm64 6.2.0+dfsg1-3 [249 kB] Get: 231 http://deb.debian.org/debian bullseye/main arm64 libpetsc-real3.14-dev arm64 3.14.5+dfsg1-4 [6317 kB] Get: 232 http://deb.debian.org/debian bullseye/main arm64 libparpack2-dev arm64 3.8.0-1 [92.9 kB] Get: 233 http://deb.debian.org/debian bullseye/main arm64 libslepc-real3.14-dev arm64 3.14.2+dfsg1-1 [4443 kB] Get: 234 http://deb.debian.org/debian bullseye/main arm64 libdolfinx-real-dev arm64 2019.2.0~git20210130.c14cb0a-5 [49.5 kB] Get: 235 http://deb.debian.org/debian bullseye/main arm64 libxml2-dev arm64 2.9.10+dfsg-6.7 [754 kB] Get: 236 http://deb.debian.org/debian bullseye/main arm64 python3-cffi-backend arm64 1.14.5-1 [86.0 kB] Get: 237 http://deb.debian.org/debian bullseye/main arm64 python3-ply all 3.11-4 [65.5 kB] Get: 238 http://deb.debian.org/debian bullseye/main arm64 python3-pycparser all 2.20-3 [74.5 kB] Get: 239 http://deb.debian.org/debian bullseye/main arm64 python3-cffi all 1.14.5-1 [87.9 kB] Get: 240 http://deb.debian.org/debian bullseye/main arm64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 241 http://deb.debian.org/debian bullseye/main arm64 python3-numpy arm64 1:1.19.5-1 [3196 kB] Get: 242 http://deb.debian.org/debian bullseye/main arm64 python3-mpmath all 1.2.1-1 [418 kB] Get: 243 http://deb.debian.org/debian bullseye/main arm64 python3-sympy all 1.7.1-3 [4031 kB] Get: 244 http://deb.debian.org/debian bullseye/main arm64 python3-fiat all 2019.2.0~git20210116.0439689-2 [70.6 kB] Get: 245 http://deb.debian.org/debian bullseye/main arm64 python3-ufl all 2019.2.0~git20210211.d60cd09-1 [156 kB] Get: 246 http://deb.debian.org/debian bullseye/main arm64 python3-basix arm64 0.0.1~git20210122.4f10ef2-2 [74.8 kB] Get: 247 http://deb.debian.org/debian bullseye/main arm64 python3-ffcx all 2019.2.0~git20210122.22ca4c0-2 [106 kB] Get: 248 http://deb.debian.org/debian bullseye/main arm64 libdolfinx-dev all 2019.2.0~git20210130.c14cb0a-5 [149 kB] Fetched 150 MB in 3s (51.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../1-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_arm64.deb ... 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Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20934 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_arm64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../001-libncurses6_6.2+20201114-2_arm64.deb ... Unpacking libncurses6:arm64 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:arm64. 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Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:arm64. Preparing to unpack .../009-libmd0_1.0.3-3_arm64.deb ... Unpacking libmd0:arm64 (1.0.3-3) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../010-libbsd0_0.11.3-1_arm64.deb ... Unpacking libbsd0:arm64 (0.11.3-1) ... Selecting previously unselected package libedit2:arm64. Preparing to unpack .../011-libedit2_3.1-20191231-2+b1_arm64.deb ... Unpacking libedit2:arm64 (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:arm64. Preparing to unpack .../012-libcbor0_0.5.0+dfsg-2_arm64.deb ... Unpacking libcbor0:arm64 (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:arm64. Preparing to unpack .../013-libfido2-1_1.6.0-2_arm64.deb ... Unpacking libfido2-1:arm64 (1.6.0-2) ... Selecting previously unselected package openssh-client. Preparing to unpack .../014-openssh-client_1%3a8.4p1-5_arm64.deb ... 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Preparing to unpack .../032-libssh2-1_1.9.0-2_arm64.deb ... Unpacking libssh2-1:arm64 (1.9.0-2) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../033-libcurl4_7.74.0-1.3+b1_arm64.deb ... Unpacking libcurl4:arm64 (7.74.0-1.3+b1) ... Selecting previously unselected package libjsoncpp24:arm64. Preparing to unpack .../034-libjsoncpp24_1.9.4-4_arm64.deb ... Unpacking libjsoncpp24:arm64 (1.9.4-4) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../035-librhash0_1.4.1-2_arm64.deb ... Unpacking librhash0:arm64 (1.4.1-2) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../036-libuv1_1.40.0-2_arm64.deb ... Unpacking libuv1:arm64 (1.40.0-2) ... Selecting previously unselected package cmake. Preparing to unpack .../037-cmake_3.18.4-2_arm64.deb ... Unpacking cmake (3.18.4-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../038-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../039-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../040-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../041-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../042-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../043-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../044-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../045-libelf1_0.183-1_arm64.deb ... Unpacking libelf1:arm64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../046-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package gettext. Preparing to unpack .../047-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../048-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../049-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../050-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package fonts-mathjax. Preparing to unpack .../051-fonts-mathjax_2.7.9+dfsg-1_all.deb ... Unpacking fonts-mathjax (2.7.9+dfsg-1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../052-libgfortran5_10.2.1-6_arm64.deb ... Unpacking libgfortran5:arm64 (10.2.1-6) ... Selecting previously unselected package libgfortran-10-dev:arm64. Preparing to unpack .../053-libgfortran-10-dev_10.2.1-6_arm64.deb ... Unpacking libgfortran-10-dev:arm64 (10.2.1-6) ... Selecting previously unselected package gfortran-10. Preparing to unpack .../054-gfortran-10_10.2.1-6_arm64.deb ... Unpacking gfortran-10 (10.2.1-6) ... Selecting previously unselected package gfortran. Preparing to unpack .../055-gfortran_4%3a10.2.1-1_arm64.deb ... Unpacking gfortran (4:10.2.1-1) ... Selecting previously unselected package libnl-3-200:arm64. Preparing to unpack .../056-libnl-3-200_3.4.0-1+b1_arm64.deb ... 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Setting up libblas3:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libuv1:arm64 (1.40.0-2) ... Setting up libjpeg62-turbo:arm64 (1:2.0.6-4) ... Setting up libboost-program-options-dev:arm64 (1.74.0.3) ... Setting up libx11-data (2:1.7.1-1) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.0.6-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libboost-system1.74-dev:arm64 (1.74.0-9) ... Setting up libncurses6:arm64 (6.2+20201114-2) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up libboost-regex1.74.0:arm64 (1.74.0-9) ... Setting up opencl-clhpp-headers (3.0~2.0.13-1) ... Setting up libssl-dev:arm64 (1.1.1k-1) ... Setting up libhwloc15:arm64 (2.4.1+dfsg-1) ... Setting up libevent-core-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libevent-2.1-7:arm64 (2.1.12-stable-1) ... 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Setting up openmpi-common (4.1.0-10) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgfortran-10-dev:arm64 (10.2.1-6) ... Setting up libssh2-1:arm64 (1.9.0-2) ... Setting up libcxsparse3:arm64 (1:5.8.1+dfsg-2) ... Setting up cmake-data (3.18.4-2) ... Setting up libboost-dev:arm64 (1.74.0.3) ... Setting up libboost-math1.74-dev:arm64 (1.74.0-9) ... Setting up libboost-filesystem1.74-dev:arm64 (1.74.0-9) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libboost-date-time1.74.0:arm64 (1.74.0-9) ... Setting up libscotch-6.1:arm64 (6.1.0-2) ... Setting up libfido2-1:arm64 (1.6.0-2) ... Setting up libbsd0:arm64 (0.11.3-1) ... Setting up libelf1:arm64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libboost-timer1.74.0:arm64 (1.74.0-9) ... Setting up libicu-dev:arm64 (67.1-7) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up libsuitesparseconfig5:arm64 (1:5.8.1+dfsg-2) ... Setting up libboost-filesystem-dev:arm64 (1.74.0.3) ... Setting up libprocps8:arm64 (2:3.3.17-5) ... Setting up libblas-dev:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up libsz2:arm64 (1.0.4-1) ... Setting up librbio2:arm64 (1:5.8.1+dfsg-2) ... Setting up libboost-thread1.74.0:arm64 (1.74.0-9) ... Setting up libevent-pthreads-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libamd2:arm64 (1:5.8.1+dfsg-2) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libevent-extra-2.1-7:arm64 (2.1.12-stable-1) ... Setting up liblapack3:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libcolamd2:arm64 (1:5.8.1+dfsg-2) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:arm64 (3.4.3-2+b1) ... Setting up libboost-chrono-dev:arm64 (1.74.0.3) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libboost-math-dev:arm64 (1.74.0.3) ... Setting up libedit2:arm64 (3.1-20191231-2+b1) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libarpack2:arm64 (3.8.0-1) ... Setting up libjpeg-dev:arm64 (1:2.0.6-4) ... Setting up libsuperlu5:arm64 (5.2.2+dfsg1-2) ... Setting up libevent-openssl-2.1-7:arm64 (2.1.12-stable-1) ... Setting up libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnuma-dev:arm64 (2.0.12-1+b1) ... Setting up libnl-route-3-200:arm64 (3.4.0-1+b1) ... Setting up libsliplu1:arm64 (1:5.8.1+dfsg-2) ... Setting up libcamd2:arm64 (1:5.8.1+dfsg-2) ... Setting up libmongoose2:arm64 (1:5.8.1+dfsg-2) ... Setting up libxml2-dev:arm64 (2.9.10+dfsg-6.7) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libevent-dev (2.1.12-stable-1) ... Setting up liblapack-dev:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up libeigen3-dev (3.3.9-2) ... Setting up gfortran-10 (10.2.1-6) ... Setting up libboost-timer1.74-dev:arm64 (1.74.0-9) ... Setting up ocl-icd-opencl-dev:arm64 (2.2.14-2) ... Setting up autoconf (2.69-14) ... Setting up libboost-serialization1.74-dev:arm64 (1.74.0-9) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up libboost-regex1.74-dev:arm64 (1.74.0-9) ... Setting up libnl-3-dev:arm64 (3.4.0-1+b1) ... Setting up groff-base (1.22.4-6) ... Setting up libklu1:arm64 (1:5.8.1+dfsg-2) ... Setting up libccolamd2:arm64 (1:5.8.1+dfsg-2) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:arm64 (7.74.0-1.3+b1) ... Setting up libx11-6:arm64 (2:1.7.1-1) ... Setting up libsuperlu-dev:arm64 (5.2.2+dfsg1-2) ... Setting up libbasix-dev:arm64 (0.0.1~git20210122.4f10ef2-2) ... Setting up libfftw3-dev:arm64 (3.3.8-2) ... Setting up libcholmod3:arm64 (1:5.8.1+dfsg-2) ... Setting up libboost-timer-dev:arm64 (1.74.0.3) ... Setting up libpython3.9-stdlib:arm64 (3.9.2-1) ... Setting up libpython3-stdlib:arm64 (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libspqr2:arm64 (1:5.8.1+dfsg-2) ... Setting up libibverbs1:arm64 (33.2-1) ... Setting up libarpack2-dev:arm64 (3.8.0-1) ... Setting up ibverbs-providers:arm64 (33.2-1) ... Setting up openssh-client (1:8.4p1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:arm64 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:arm64 (460.73.01-1) ... Setting up libboost-iostreams1.74-dev:arm64 (1.74.0-9) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1+b1) ... Setting up libboost-date-time1.74-dev:arm64 (1.74.0-9) ... Setting up libltdl-dev:arm64 (2.4.6-15) ... Setting up libumfpack5:arm64 (1:5.8.1+dfsg-2) ... Setting up libboost-serialization-dev:arm64 (1.74.0.3) ... Setting up cmake (3.18.4-2) ... Setting up libboost-thread1.74-dev:arm64 (1.74.0-9) ... Setting up libhwloc-dev:arm64 (2.4.1+dfsg-1) ... Setting up python3.9 (3.9.2-1) ... Setting up libboost-thread-dev:arm64 (1.74.0.3) ... Setting up librdmacm1:arm64 (33.2-1) ... Setting up libucx0:arm64 (1.10.1~rc1+really.1.10.0-1) ... Setting up libsuitesparse-dev:arm64 (1:5.8.1+dfsg-2) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up libboost-iostreams-dev:arm64 (1.74.0.3) ... Setting up libibverbs-dev:arm64 (33.2-1) ... Setting up libhwloc-plugins:arm64 (2.4.1+dfsg-1) ... Setting up libpetsc3.14-dev-common (3.14.5+dfsg1-4) ... Setting up python3-mpmath (1.2.1-1) ... Setting up python3-cffi-backend:arm64 (1.14.5-1) ... Setting up python3-basix (0.0.1~git20210122.4f10ef2-2) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up libfabric1 (1.11.0-2) ... Setting up python3-sympy (1.7.1-3) ... Setting up libpmix2:arm64 (4.0.0-4) ... Setting up libopenmpi3:arm64 (4.1.0-10) ... Setting up python3-ply (3.11-4) ... Setting up libboost-mpi1.74.0 (1.74.0-9) ... Setting up libptscotch-6.1:arm64 (6.1.0-2) ... Setting up libfftw3-mpi3:arm64 (3.3.8-2) ... Setting up python3-pycparser (2.20-3) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up libpmix-dev:arm64 (4.0.0-4) ... Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1:arm64 (1.10.6+repack-4) ... Setting up python3-fiat (2019.2.0~git20210116.0439689-2) ... Setting up libparpack2:arm64 (3.8.0-1) ... Setting up libcombblas1.16.0:arm64 (1.6.2-6) ... Setting up python3-ufl (2019.2.0~git20210211.d60cd09-1) ... Setting up python3-cffi (1.14.5-1) ... Setting up libfftw3-mpi-dev:arm64 (3.3.8-2) ... Setting up mpi-default-bin (1.13) ... Setting up python3-ffcx (2019.2.0~git20210122.22ca4c0-2) ... Setting up libhdf5-openmpi-fortran-102:arm64 (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-100:arm64 (1.10.6+repack-4) ... Setting up libsuperlu-dist6:arm64 (6.2.0+dfsg1-3) ... Setting up libopenmpi-dev:arm64 (4.1.0-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up libhdf5-openmpi-cpp-103-1:arm64 (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-cpp-100:arm64 (1.10.6+repack-4) ... Setting up libhdf5-openmpi-hl-fortran-100:arm64 (1.10.6+repack-4) ... Setting up libscalapack-openmpi2.1:arm64 (2.1.0-4) ... Setting up libhypre:arm64 (2.18.2-1) ... Setting up libsuperlu-dist-dev:arm64 (6.2.0+dfsg1-3) ... Setting up libscalapack-openmpi-dev:arm64 (2.1.0-4) ... Setting up libmumps-5.3:arm64 (5.3.5-2) ... Setting up mpi-default-dev (1.13) ... Setting up libscalapack-mpi-dev:arm64 (2.1.0-4) ... Setting up libhdf5-openmpi-dev (1.10.6+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libmumps-dev:arm64 (5.3.5-2) ... Setting up libscotch-dev (6.1.0-2) ... Setting up libboost-mpi1.74-dev (1.74.0-9) ... Setting up libparpack2-dev:arm64 (3.8.0-1) ... Setting up libpetsc-real3.14:arm64 (3.14.5+dfsg1-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/libpetsc_real.so.3.14.5 to provide /usr/lib/aarch64-linux-gnu/libpetsc.so.3.14 (libpetsc.so.3.14) in auto mode Setting up libhypre-dev:arm64 (2.18.2-1) ... Setting up libptscotch-dev (6.1.0-2) ... Setting up libboost-mpi-dev (1.74.0.3) ... Setting up libhdf5-mpi-dev (1.10.6+repack-4) ... Setting up libslepc-real3.14 (3.14.2+dfsg1-1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/libslepc_real.so.3.14.2 to provide /usr/lib/aarch64-linux-gnu/libslepc.so.3.14 (libslepc.so.3.14) in auto mode Setting up libdolfinx-real2019.2:arm64 (2019.2.0~git20210130.c14cb0a-5) ... Setting up libpetsc-real3.14-dev:arm64 (3.14.5+dfsg1-4) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/libpetsc_real.so.3.14.5 to provide /usr/lib/aarch64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real to provide /usr/lib/petscdir/3.14 (petsc3.14) in auto mode Setting up libslepc-real3.14-dev (3.14.2+dfsg1-1) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.14/aarch64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/libslepc_real.so.3.14.2 to provide /usr/lib/aarch64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.14/aarch64-linux-gnu-real to provide /usr/lib/slepcdir/3.14 (slepc3.14) in auto mode Setting up libdolfinx-real-dev:arm64 (2019.2.0~git20210130.c14cb0a-5) ... Setting up libdolfinx-dev (2019.2.0~git20210130.c14cb0a-5) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl The following NEW packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 59.5 kB of archives. After this operation, 157 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main arm64 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:2 http://deb.debian.org/debian bullseye/main arm64 libtext-glob-perl all 0.11-1 [8888 B] Get:3 http://deb.debian.org/debian bullseye/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:4 http://deb.debian.org/debian bullseye/main arm64 usrmerge all 25 [13.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.5 kB in 0s (1231 kB/s) Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 54776 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... Unpacking libnumber-compare-perl (0.03-1.1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package usrmerge. Preparing to unpack .../archives/usrmerge_25_all.deb ... Unpacking usrmerge (25) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up usrmerge (25) ... The system has been successfully converted. Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. I: Building the package hostname: Temporary failure in name resolution I: Running cd /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.0~git20210119.80e82ac-1_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.0~git20210119.80e82ac-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=cmake --sourcedirectory=src dh_auto_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_clean -O--buildsystem=cmake -O--sourcedirectory=src debian/rules binary dh binary --buildsystem=cmake --sourcedirectory=src dh_update_autotools_config -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_configure -O--buildsystem=cmake -O--sourcedirectory=src cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu ../src -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found Boost 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/Boost-1.74.0 -- Requested configuration: QUIET REQUIRED COMPONENTS timer;filesystem -- Found boost_headers 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/boost_headers-1.74.0 -- Found boost_timer 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/boost_timer-1.74.0 -- [x] libboost_timer.so.1.74.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: chrono;headers -- Found boost_chrono 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/boost_chrono-1.74.0 -- [x] libboost_chrono.so.1.74.0 -- [ ] libboost_chrono.a -- Adding boost_chrono dependencies: headers -- Found boost_filesystem 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/boost_filesystem-1.74.0 -- [x] libboost_filesystem.so.1.74.0 -- [ ] libboost_filesystem.a -- Adding boost_filesystem dependencies: headers -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.70") found components: timer filesystem -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for one of the modules 'craypetsc_real;petsc;PETSc' -- Looking for sys/types.h CMake Warning (dev) at /usr/share/cmake-3.18/Modules/CheckIncludeFile.cmake:80 (message): Policy CMP0075 is not set: Include file check macros honor CMAKE_REQUIRED_LIBRARIES. Run "cmake --help-policy CMP0075" for policy details. Use the cmake_policy command to set the policy and suppress this warning. CMAKE_REQUIRED_LIBRARIES is set to: /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so For compatibility with CMake 3.11 and below this check is ignoring it. Call Stack (most recent call first): /usr/share/cmake-3.18/Modules/CheckTypeSize.cmake:230 (check_include_file) /usr/share/dolfinx/cmake/FindPETSc.cmake:222 (check_type_size) /usr/share/cmake-3.18/Modules/CMakeFindDependencyMacro.cmake:47 (find_package) /usr/share/dolfinx/cmake/DOLFINXConfig.cmake:61 (find_dependency) CMakeLists.txt:13 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'crayslepc_real;slepc;SLEPc' -- Found Boost 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/Boost-1.74.0 -- Requested configuration: QUIET REQUIRED COMPONENTS program_options -- Found boost_program_options 1.74.0 at /usr/lib/aarch64-linux-gnu/cmake/boost_program_options-1.74.0 -- [x] libboost_program_options.so.1.74.0 -- [ ] libboost_program_options.a -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.70") found components: program_options -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' /usr/bin/cmake -S"/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/src" -B"/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu" --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/CMakeFiles" "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu//CMakeFiles/progress.marks" make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' [ 11%] Generating Poisson.c ffcx /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/src/Poisson.ufl [ 22%] Generating Elasticity.c ffcx /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/src/Elasticity.ufl cd "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/src" "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/src" "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu" "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu" "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake" --color= Dependee "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake" is newer than depender "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/CMakeFiles/dolfinx-scaling-test.dir/depend.internal". 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/usr/lib/slepcdir/slepc3.14/aarch64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/build/fenicsx-performance-tests-0.0~git20210119.80e82ac=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -pthread -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/Poisson.c" [100%] Linking CXX executable dolfinx-scaling-test /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/fenicsx-performance-tests-0.0~git20210119.80e82ac=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -pthread CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o 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/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib/libpetsc_real.so make[3]: Leaving directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' [100%] Built target dolfinx-scaling-test make[2]: Leaving directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/CMakeFiles" 0 make[1]: Leaving directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac' debian/tests/run-dolfinx-scaling-test -p /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu ==== elasticity weak scaling (8 processes with ndofs=10000) ==== UnitCube (29x26x32) to be refined 0 times ---------------------------------------------------------------- Test problem summary dolfinx version: 2019.2.9.99 dolfinx hash: unknown ufl hash: ac78d56bf5c7fcc5585cc7f0654188e75f1c73b1 petsc version: Petsc Release Version 3.14.5, Mar 03, 2021 Problem type: elasticity Scaling type: weak Num processes: 8 Num cells 144768 Total degrees of freedom: 80190 Average degrees of freedom per process: 10023 ---------------------------------------------------------------- KSP Object: 8 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 8 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = 0. Threshold scaling factor for each level not specified = 1. AGG specific options Symmetric graph false Number of levels to square graph 1 Number smoothing steps 1 Complexity: grid = 1.3984 Coarse grid solver -- level ------------------------------- KSP Object: (mg_coarse_) 8 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 8 MPI processes type: bjacobi number of blocks = 8 Local solver is the same for all blocks, as in the following KSP and PC objects on rank 0: KSP Object: (mg_coarse_sub_) 1 MPI processes type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI processes type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.50356 Factored matrix follows: Mat Object: 1 MPI processes type: seqaij rows=546, cols=546, bs=6 package used to perform factorization: petsc total: nonzeros=235836, allocated nonzeros=235836 using I-node routines: found 160 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 1 MPI processes type: seqaij rows=546, cols=546, bs=6 total: nonzeros=156852, allocated nonzeros=156852 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 182 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=546, cols=546, bs=6 total: nonzeros=156852, allocated nonzeros=156852 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 182 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 8 MPI processes type: chebyshev eigenvalue estimates used: min = 0.170903, max = 1.87994 eigenvalues estimate via cg min 0.025989, max 1.70903 eigenvalues estimated using cg with translations [0. 0.1; 0. 1.1] KSP Object: (mg_levels_1_esteig_) 8 MPI processes type: cg maximum iterations=10, initial guess is zero tolerances: relative=1e-12, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test estimating eigenvalues using noisy right hand side maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 8 MPI processes type: jacobi linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=6414, cols=6414, bs=6 total: nonzeros=1204884, allocated nonzeros=1204884 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 206 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 8 MPI processes type: chebyshev eigenvalue estimates used: min = 0.261731, max = 2.87904 eigenvalues estimate via cg min 0.0505966, max 2.61731 eigenvalues estimated using cg with translations [0. 0.1; 0. 1.1] KSP Object: (mg_levels_2_esteig_) 8 MPI processes type: cg maximum iterations=10, initial guess is zero tolerances: relative=1e-12, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test estimating eigenvalues using noisy right hand side maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 8 MPI processes type: jacobi linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=80190, cols=80190, bs=3 total: nonzeros=3418020, allocated nonzeros=3418020 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3400 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=80190, cols=80190, bs=3 total: nonzeros=3418020, allocated nonzeros=3418020 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3400 nodes, limit used is 5 [MPI_AVG] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------- Build BoxMesh | 1 14.149770 14.149770 Build dofmap data | 2 0.412828 0.825656 Build sparsity | 1 0.118623 0.118623 Compute SCOTCH graph re-ordering | 2 0.004988 0.009976 Compute dof reordering map | 2 0.035761 0.071522 Compute entities of dim = 1 | 1 1.088115 1.088115 Compute entities of dim = 2 | 1 0.825281 0.825281 Compute graph partition (SCOTCH) | 1 12.313922 12.313922 Compute local part of mesh dual graph | 1 0.078031 0.078031 Compute local-to-local map | 1 0.001289 0.001289 Compute non-local part of mesh dual graph | 1 0.131104 0.131104 Compute-local-to-global links for global/local adjacency list | 1 0.000620 0.000620 Distribute in graph creation AdjacencyList | 1 0.037365 0.037365 Extract partition boundaries from SCOTCH graph | 1 0.001558 0.001558 Fetch float data from remote processes | 1 0.077875 0.077875 Get SCOTCH graph data | 1 0.000018 0.000018 Init dofmap from element dofmap | 2 0.013831 0.027663 PETSc Krylov solver | 1 19.055692 19.055692 SCOTCH: call SCOTCH_dgraphBuild | 1 0.030957 0.030957 SCOTCH: call SCOTCH_dgraphHalo | 1 0.031868 0.031868 SCOTCH: call SCOTCH_dgraphPart | 1 12.245046 12.245046 SCOTCH: call SCOTCH_graphBuild | 2 0.000016 0.000031 SCOTCH: call SCOTCH_graphOrder | 2 0.003798 0.007595 SparsityPattern::assemble | 1 0.405807 0.405807 TOPOLOGY: Create sets | 1 0.065194 0.065194 ZZZ Assemble matrix | 1 1.022935 1.022935 ZZZ Assemble vector | 1 0.038854 0.038854 ZZZ Create Mesh | 1 14.150593 14.150593 ZZZ Create RHS function | 1 0.168553 0.168553 ZZZ Create boundary conditions | 1 0.102532 0.102532 ZZZ Create forms | 1 0.000093 0.000093 ZZZ Create mesh entity permutations | 1 1.954588 1.954588 ZZZ Create near-nullspace | 1 1.156032 1.156032 ZZZ FunctionSpace | 1 0.386088 0.386088 ZZZ Solve | 1 19.341763 19.341763 *** Number of Krylov iterations: 16 *** Solution norm: 6.02584e-05 ************************************************************************************************************************ *** WIDEN YOUR WINDOW TO 120 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** ************************************************************************************************************************ ---------------------------------------------- PETSc Performance Summary: ---------------------------------------------- /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 8 processors, by pbuilder2 Sat Aug 27 15:34:42 2022 Using Petsc Release Version 3.14.5, Mar 03, 2021 Max Max/Min Avg Total Time (sec): 3.952e+01 1.001 3.950e+01 Objects: 3.780e+02 1.005 3.762e+02 Flop: 2.629e+08 1.263 2.237e+08 1.790e+09 Flop/sec: 6.657e+06 1.264 5.663e+06 4.530e+07 MPI Messages: 2.596e+03 1.726 1.858e+03 1.487e+04 MPI Message Lengths: 1.304e+07 1.668 5.277e+03 7.845e+07 MPI Reductions: 6.490e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flop and VecAXPY() for complex vectors of length N --> 8N flop Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 3.9504e+01 100.0% 1.7897e+09 100.0% 1.487e+04 100.0% 5.277e+03 100.0% 6.420e+02 98.9% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 95 1.0 2.6982e+00 1.4 0.00e+00 0.0 8.4e+02 4.0e+00 9.5e+01 6 0 6 0 15 6 0 6 0 15 0 BuildTwoSidedF 76 1.0 2.0314e+00 1.4 0.00e+00 0.0 4.1e+02 5.6e+04 7.6e+01 4 0 3 29 12 4 0 3 29 12 0 MatMult 192 1.0 3.2320e+00 1.1 1.25e+08 1.2 7.4e+03 3.6e+03 0.0e+00 8 51 50 34 0 8 51 50 34 0 283 MatMultAdd 34 1.0 9.2634e-01 2.1 8.93e+06 1.2 7.8e+02 1.1e+03 0.0e+00 2 4 5 1 0 2 4 5 1 0 72 MatMultTranspose 34 1.0 5.6483e-01 1.9 8.94e+06 1.2 7.8e+02 1.1e+03 0.0e+00 1 4 5 1 0 1 4 5 1 0 118 MatSolve 17 0.0 8.6754e-03 0.0 8.01e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 923 MatLUFactorSym 1 1.0 7.3157e-022490.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 3.4845e-01130995.8 6.34e+07 0.0 0.0e+00 0.0e+00 0.0e+00 0 4 0 0 0 0 4 0 0 0 182 MatScale 6 1.0 4.1063e-02 1.4 6.33e+05 1.1 7.8e+01 1.0e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 116 MatResidual 34 1.0 5.7653e-01 1.1 2.17e+07 1.2 1.3e+03 3.4e+03 0.0e+00 1 9 9 6 0 1 9 9 6 0 273 MatAssemblyBegin 41 1.0 1.0605e+00 1.7 0.00e+00 0.0 4.1e+02 5.6e+04 1.6e+01 2 0 3 29 2 2 0 3 29 2 0 MatAssemblyEnd 41 1.0 1.9416e+00 1.1 1.78e+05 3.4 9.4e+02 3.5e+02 7.0e+01 5 0 6 0 11 5 0 6 0 11 0 MatGetRowIJ 1 0.0 3.4702e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 6.9591e-01 1.1 0.00e+00 0.0 4.9e+01 3.5e+04 3.0e+01 2 0 0 2 5 2 0 0 2 5 0 MatGetOrdering 1 0.0 7.7790e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 4.7532e-01 1.1 0.00e+00 0.0 6.3e+02 6.4e+02 9.0e+00 1 0 4 1 1 1 0 4 1 1 0 MatZeroEntries 2 1.0 3.8926e-04 3.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 1.3595e-01 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 2 1.0 6.7919e-02 1.5 6.79e+04 1.2 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 0 0 0 0 0 0 7 MatTranspose 4 1.0 2.3593e-02 2.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatMatMultSym 6 1.0 7.9249e-01 1.1 0.00e+00 0.0 4.0e+02 6.3e+03 2.0e+01 2 0 3 3 3 2 0 3 3 3 0 MatMatMultNum 2 1.0 1.5177e-01 1.3 7.67e+06 1.3 7.8e+01 2.0e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 358 MatPtAPSymbolic 2 1.0 1.2875e+00 1.0 0.00e+00 0.0 4.8e+02 3.2e+04 1.4e+01 3 0 3 19 2 3 0 3 19 2 0 MatPtAPNumeric 2 1.0 1.4847e+00 1.0 7.14e+07 1.4 3.6e+02 3.8e+04 1.2e+01 4 28 2 17 2 4 28 2 17 2 335 MatTrnMatMultSym 1 1.0 6.7174e-01 1.1 0.00e+00 0.0 2.6e+02 1.9e+04 1.3e+01 2 0 2 6 2 2 0 2 6 2 0 MatGetLocalMat 7 1.0 1.3679e-02 2.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 6 1.0 2.3028e-01 1.2 0.00e+00 0.0 5.5e+02 2.9e+04 0.0e+00 1 0 4 20 0 1 0 4 20 0 0 VecDot 36 1.0 8.3920e-01 1.1 7.46e+05 1.1 0.0e+00 0.0e+00 3.6e+01 2 0 0 0 6 2 0 0 0 6 7 VecMDot 20 1.0 4.3840e-01 1.7 1.24e+06 1.1 0.0e+00 0.0e+00 2.0e+01 1 1 0 0 3 1 1 0 0 3 22 VecTDot 74 1.0 1.4527e+00 1.3 1.14e+06 1.1 0.0e+00 0.0e+00 7.4e+01 3 0 0 0 11 3 0 0 0 12 6 VecNorm 68 1.0 1.4087e+00 1.4 9.94e+05 1.1 0.0e+00 0.0e+00 6.8e+01 3 0 0 0 10 3 0 0 0 11 5 VecScale 28 1.0 5.2784e-04 1.1 1.86e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2716 VecCopy 116 1.0 1.1514e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 179 1.0 5.6012e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 83 1.0 3.3803e-03 1.2 1.32e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 3021 VecAYPX 237 1.0 7.2506e-03 1.3 2.05e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2171 VecAXPBYCZ 68 1.0 3.8121e-03 1.5 1.92e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 3862 VecMAXPY 22 1.0 3.2737e-03 1.2 1.47e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 3439 VecAssemblyBegin 61 1.0 1.1416e+00 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 3 0 0 0 9 3 0 0 0 9 0 VecAssemblyEnd 61 1.0 5.9408e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 180 1.0 5.2873e-03 1.4 1.02e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1474 VecScatterBegin 327 1.0 2.3359e-02 1.4 0.00e+00 0.0 1.2e+04 2.7e+03 0.0e+00 0 0 79 41 0 0 0 79 41 0 0 VecScatterEnd 327 1.0 5.2192e+00 1.2 3.19e+04 3.0 0.0e+00 0.0e+00 0.0e+00 12 0 0 0 0 12 0 0 0 0 0 VecSetRandom 2 1.0 8.8262e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecNormalize 28 1.0 5.5964e-01 1.5 5.59e+05 1.1 0.0e+00 0.0e+00 2.8e+01 1 0 0 0 4 1 0 0 0 4 8 SFSetGraph 19 1.0 1.1308e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 19 1.0 9.3723e-01 1.3 0.00e+00 0.0 1.3e+03 3.4e+02 1.9e+01 2 0 9 1 3 2 0 9 1 3 0 SFBcastOpBegin 303 1.0 2.0768e-02 1.5 0.00e+00 0.0 1.1e+04 2.8e+03 0.0e+00 0 0 77 40 0 0 0 77 40 0 0 SFBcastOpEnd 303 1.0 4.9887e+00 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 12 0 0 0 0 12 0 0 0 0 0 SFReduceBegin 35 1.0 1.2294e-03 1.2 0.00e+00 0.0 8.2e+02 1.2e+03 0.0e+00 0 0 6 1 0 0 0 6 1 0 0 SFReduceEnd 35 1.0 5.4242e-01 1.9 3.19e+04 3.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 SFPack 338 1.0 4.5807e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 338 1.0 1.0694e-03 1.2 3.19e+04 3.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 111 KSPSetUp 7 1.0 1.5123e+00 1.0 1.42e+07 1.2 7.8e+02 3.4e+03 7.2e+01 4 6 5 3 11 4 6 5 3 11 68 KSPSolve 1 1.0 1.8868e+01 1.0 2.60e+08 1.3 1.4e+04 5.0e+03 5.5e+02 48 99 97 93 85 48 99 97 93 86 94 KSPGMRESOrthog 20 1.0 4.4105e-01 1.7 2.49e+06 1.1 0.0e+00 0.0e+00 2.0e+01 1 1 0 0 3 1 1 0 0 3 43 PCGAMGGraph_AGG 2 1.0 1.3962e+00 1.0 6.94e+05 1.2 3.9e+02 4.0e+02 3.8e+01 3 0 3 0 6 3 0 3 0 6 4 PCGAMGCoarse_AGG 2 1.0 1.3919e+00 1.0 0.00e+00 0.0 1.1e+03 5.5e+03 3.0e+01 3 0 7 8 5 3 0 7 8 5 0 PCGAMGProl_AGG 2 1.0 3.8753e+00 1.0 0.00e+00 0.0 2.6e+03 1.4e+03 1.9e+02 10 0 17 5 29 10 0 17 5 29 0 PCGAMGPOpt_AGG 2 1.0 2.0760e+00 1.0 2.42e+07 1.2 1.3e+03 5.4e+03 8.2e+01 5 10 8 9 13 5 10 8 9 13 84 GAMG: createProl 2 1.0 8.6927e+00 1.0 2.49e+07 1.2 5.3e+03 3.1e+03 3.4e+02 22 10 36 21 52 22 10 36 21 53 21 Graph 4 1.0 1.3959e+00 1.0 6.94e+05 1.2 3.9e+02 4.0e+02 3.8e+01 3 0 3 0 6 3 0 3 0 6 4 MIS/Agg 2 1.0 4.7544e-01 1.1 0.00e+00 0.0 6.3e+02 6.4e+02 9.0e+00 1 0 4 1 1 1 0 4 1 1 0 SA: col data 2 1.0 3.4797e+00 1.0 0.00e+00 0.0 2.4e+03 1.2e+03 1.7e+02 9 0 16 3 26 9 0 16 3 26 0 SA: frmProl0 2 1.0 2.8786e-01 1.1 0.00e+00 0.0 2.0e+02 4.3e+03 1.2e+01 1 0 1 1 2 1 0 1 1 2 0 SA: smooth 2 1.0 8.9896e-01 1.0 8.27e+06 1.3 4.8e+02 8.6e+03 2.8e+01 2 3 3 5 4 2 3 3 5 4 65 GAMG: partLevel 2 1.0 3.9773e+00 1.0 7.14e+07 1.4 9.3e+02 3.3e+04 8.1e+01 10 28 6 39 12 10 28 6 39 13 125 repartition 1 1.0 1.2341e+00 1.0 0.00e+00 0.0 9.4e+01 1.9e+04 5.5e+01 3 0 1 2 8 3 0 1 2 9 0 Invert-Sort 1 1.0 1.6789e-01 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+00 0 0 0 0 1 0 0 0 0 1 0 Move A 1 1.0 3.9625e-01 1.1 0.00e+00 0.0 3.5e+01 4.9e+04 1.6e+01 1 0 0 2 2 1 0 0 2 2 0 Move P 1 1.0 3.5963e-01 1.0 0.00e+00 0.0 1.4e+01 4.6e+02 1.7e+01 1 0 0 0 3 1 0 0 0 3 0 PCSetUp 2 1.0 1.4754e+01 1.0 1.45e+08 1.5 7.0e+03 7.1e+03 5.0e+02 36 47 47 63 77 36 47 47 63 78 57 PCSetUpOnBlocks 17 1.0 4.2261e-011549.3 6.34e+07 0.0 0.0e+00 0.0e+00 0.0e+00 0 4 0 0 0 0 4 0 0 0 150 PCApply 39 1.0 3.6591e+00 1.1 1.62e+08 1.7 6.9e+03 2.9e+03 4.0e+00 9 48 46 25 1 9 48 46 25 1 235 ------------------------------------------------------------------------------------------------------------------------ Memory usage is given in bytes: Object Type Creations Destructions Memory Descendants' Mem. Reports information only for process 0. --- Event Stage 0: Main Stage Matrix 68 68 24616052 0. Matrix Coarsen 2 2 1264 0. Matrix Null Space 1 1 704 0. Index Set 55 55 107948 0. IS L to G Mapping 6 6 84824 0. Vec Scatter 17 17 13872 0. Vector 185 185 4446968 0. Star Forest Graph 19 19 21888 0. Krylov Solver 9 9 72064 0. Preconditioner 9 9 9148 0. Viewer 3 2 1696 0. PetscRandom 4 4 2616 0. ======================================================================================================================== Average time to get PetscTime(): 8.4e-08 Average time for MPI_Barrier(): 0.0223997 Average time for zero size MPI_Send(): 0.00799874 #PETSc Option Table entries: --ndofs 10000 --problem_type elasticity --scaling_type weak -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -matptap_via scalable -mg_levels_esteig_ksp_type cg -mg_levels_ksp_type chebyshev -mg_levels_pc_type jacobi -options_left -pc_gamg_coarse_eq_limit 1000 -pc_type gamg #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE_core --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --prefix=/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2021-05-01 12:26:37 on reproducible Machine characteristics: Linux-4.19.0-16-arm64-aarch64-with-glibc2.31 Using PETSc directory: /usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/aarch64-linux-gnu/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/aarch64-linux-gnu -L/lib/aarch64-linux-gnu -lHYPRE_core -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lumfpack -lamd -lcholmod -lklu -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lutil -lgfortran -lm -lrt -lz -lgfortran -lm -lgfortran -lgcc_s -lpthread -lstdc++ -ldl ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 --problem_type elasticity --scaling_type weak -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -matptap_via scalable -mg_levels_esteig_ksp_type cg -mg_levels_ksp_type chebyshev -mg_levels_pc_type jacobi -options_left -pc_gamg_coarse_eq_limit 1000 -pc_type gamg #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 10000 Option left: name:--problem_type value: elasticity Option left: name:--scaling_type value: weak ==== elasticity strong scaling (8 processes with ndofs=80000) ==== UnitCube (29x26x32) to be refined 0 times ---------------------------------------------------------------- Test problem summary dolfinx version: 2019.2.9.99 dolfinx hash: unknown ufl hash: ac78d56bf5c7fcc5585cc7f0654188e75f1c73b1 petsc version: Petsc Release Version 3.14.5, Mar 03, 2021 Problem type: elasticity Scaling type: strong Num processes: 8 Num cells 144768 Total degrees of freedom: 80190 Average degrees of freedom per process: 10023 ---------------------------------------------------------------- KSP Object: 8 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 8 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = 0. Threshold scaling factor for each level not specified = 1. AGG specific options Symmetric graph false Number of levels to square graph 1 Number smoothing steps 1 Complexity: grid = 1.4074 Coarse grid solver -- level ------------------------------- KSP Object: (mg_coarse_) 8 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 8 MPI processes type: bjacobi number of blocks = 8 Local solver is the same for all blocks, as in the following KSP and PC objects on rank 0: KSP Object: (mg_coarse_sub_) 1 MPI processes type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI processes type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.51635 Factored matrix follows: Mat Object: 1 MPI processes type: seqaij rows=570, cols=570, bs=6 package used to perform factorization: petsc total: nonzeros=265356, allocated nonzeros=265356 using I-node routines: found 164 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 1 MPI processes type: seqaij rows=570, cols=570, bs=6 total: nonzeros=174996, allocated nonzeros=174996 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 189 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=570, cols=570, bs=6 total: nonzeros=174996, allocated nonzeros=174996 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 189 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 8 MPI processes type: chebyshev eigenvalue estimates used: min = 0.172525, max = 1.89777 eigenvalues estimate via cg min 0.0249434, max 1.72525 eigenvalues estimated using cg with translations [0. 0.1; 0. 1.1] KSP Object: (mg_levels_1_esteig_) 8 MPI processes type: cg maximum iterations=10, initial guess is zero tolerances: relative=1e-12, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test estimating eigenvalues using noisy right hand side maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 8 MPI processes type: jacobi linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=6456, cols=6456, bs=6 total: nonzeros=1217520, allocated nonzeros=1217520 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 236 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 8 MPI processes type: chebyshev eigenvalue estimates used: min = 0.261574, max = 2.87732 eigenvalues estimate via cg min 0.0463952, max 2.61574 eigenvalues estimated using cg with translations [0. 0.1; 0. 1.1] KSP Object: (mg_levels_2_esteig_) 8 MPI processes type: cg maximum iterations=10, initial guess is zero tolerances: relative=1e-12, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test estimating eigenvalues using noisy right hand side maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 8 MPI processes type: jacobi linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=80190, cols=80190, bs=3 total: nonzeros=3418020, allocated nonzeros=3418020 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3309 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=80190, cols=80190, bs=3 total: nonzeros=3418020, allocated nonzeros=3418020 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3309 nodes, limit used is 5 [MPI_AVG] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------- Build BoxMesh | 1 20.578062 20.578062 Build dofmap data | 2 0.675591 1.351182 Build sparsity | 1 0.243246 0.243246 Compute SCOTCH graph re-ordering | 2 0.001819 0.003638 Compute dof reordering map | 2 0.039898 0.079797 Compute entities of dim = 1 | 1 1.228577 1.228577 Compute entities of dim = 2 | 1 1.330675 1.330675 Compute graph partition (SCOTCH) | 1 18.210915 18.210915 Compute local part of mesh dual graph | 1 0.092970 0.092970 Compute local-to-local map | 1 0.003091 0.003091 Compute non-local part of mesh dual graph | 1 0.155365 0.155365 Compute-local-to-global links for global/local adjacency list | 1 0.000610 0.000610 Distribute in graph creation AdjacencyList | 1 0.073084 0.073084 Extract partition boundaries from SCOTCH graph | 1 0.002132 0.002132 Fetch float data from remote processes | 1 0.088370 0.088370 Get SCOTCH graph data | 1 0.000020 0.000020 Init dofmap from element dofmap | 2 0.021519 0.043037 PETSc Krylov solver | 1 27.549562 27.549562 SCOTCH: call SCOTCH_dgraphBuild | 1 0.036945 0.036945 SCOTCH: call SCOTCH_dgraphHalo | 1 0.047737 0.047737 SCOTCH: call SCOTCH_dgraphPart | 1 18.118961 18.118961 SCOTCH: call SCOTCH_graphBuild | 2 0.000016 0.000031 SCOTCH: call SCOTCH_graphOrder | 2 0.001628 0.003256 SparsityPattern::assemble | 1 0.459951 0.459951 TOPOLOGY: Create sets | 1 0.114739 0.114739 ZZZ Assemble matrix | 1 1.441963 1.441963 ZZZ Assemble vector | 1 0.060645 0.060645 ZZZ Create Mesh | 1 20.578885 20.578885 ZZZ Create RHS function | 1 0.243058 0.243058 ZZZ Create boundary conditions | 1 0.166814 0.166814 ZZZ Create forms | 1 0.001606 0.001606 ZZZ Create mesh entity permutations | 1 2.609239 2.609239 ZZZ Create near-nullspace | 1 1.616527 1.616527 ZZZ FunctionSpace | 1 0.721176 0.721176 ZZZ Solve | 1 27.837496 27.837496 *** Number of Krylov iterations: 16 *** Solution norm: 6.02584e-05 ************************************************************************************************************************ *** WIDEN YOUR WINDOW TO 120 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** ************************************************************************************************************************ ---------------------------------------------- PETSc Performance Summary: ---------------------------------------------- /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 8 processors, by pbuilder2 Sat Aug 27 15:36:45 2022 Using Petsc Release Version 3.14.5, Mar 03, 2021 Max Max/Min Avg Total Time (sec): 5.680e+01 1.001 5.679e+01 Objects: 3.780e+02 1.005 3.762e+02 Flop: 2.925e+08 1.411 2.282e+08 1.826e+09 Flop/sec: 5.150e+06 1.411 4.018e+06 3.214e+07 MPI Messages: 2.554e+03 2.233 1.822e+03 1.458e+04 MPI Message Lengths: 1.342e+07 1.734 5.533e+03 8.066e+07 MPI Reductions: 6.480e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flop and VecAXPY() for complex vectors of length N --> 8N flop Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 5.6795e+01 100.0% 1.8255e+09 100.0% 1.458e+04 100.0% 5.533e+03 100.0% 6.410e+02 98.9% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 95 1.0 4.1859e+00 1.5 0.00e+00 0.0 8.3e+02 4.0e+00 9.5e+01 6 0 6 0 15 6 0 6 0 15 0 BuildTwoSidedF 76 1.0 3.3632e+00 1.7 0.00e+00 0.0 4.1e+02 5.8e+04 7.6e+01 5 0 3 29 12 5 0 3 29 12 0 MatMult 192 1.0 4.3154e+00 1.1 1.25e+08 1.2 7.5e+03 3.7e+03 0.0e+00 7 50 51 34 0 7 50 51 34 0 212 MatMultAdd 34 1.0 1.4512e+00 2.0 9.12e+06 1.1 7.5e+02 1.2e+03 0.0e+00 2 4 5 1 0 2 4 5 1 0 46 MatMultTranspose 34 1.0 6.5522e-01 1.2 9.13e+06 1.1 7.5e+02 1.2e+03 0.0e+00 1 4 5 1 0 1 4 5 1 0 103 MatSolve 17 0.0 9.5701e-03 0.0 9.01e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 942 MatLUFactorSym 1 1.0 9.4926e-023906.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 6.1799e-01259659.6 7.91e+07 0.0 0.0e+00 0.0e+00 0.0e+00 0 4 0 0 0 0 4 0 0 0 128 MatScale 6 1.0 9.0881e-02 2.4 6.44e+05 1.1 7.8e+01 1.0e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 53 MatResidual 34 1.0 6.9049e-01 1.0 2.16e+07 1.2 1.3e+03 3.5e+03 0.0e+00 1 9 9 6 0 1 9 9 6 0 228 MatAssemblyBegin 41 1.0 2.0509e+00 2.6 0.00e+00 0.0 4.1e+02 5.8e+04 1.6e+01 3 0 3 29 2 3 0 3 29 2 0 MatAssemblyEnd 41 1.0 2.6257e+00 1.1 1.62e+05 2.0 9.3e+02 3.6e+02 7.0e+01 5 0 6 0 11 5 0 6 0 11 0 MatGetRowIJ 1 0.0 4.1812e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 8.3142e-01 1.1 0.00e+00 0.0 4.9e+01 4.0e+04 3.0e+01 1 0 0 2 5 1 0 0 2 5 0 MatGetOrdering 1 0.0 9.0100e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 4.6411e-01 1.1 0.00e+00 0.0 5.5e+02 7.5e+02 8.0e+00 1 0 4 1 1 1 0 4 1 1 0 MatZeroEntries 2 1.0 1.2320e-02158.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 2.4388e-01 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 2 1.0 1.1154e-01 1.9 6.91e+04 1.2 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 0 0 0 0 0 0 5 MatTranspose 4 1.0 4.7066e-02 2.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatMatMultSym 6 1.0 1.2530e+00 1.1 0.00e+00 0.0 4.0e+02 6.5e+03 2.0e+01 2 0 3 3 3 2 0 3 3 3 0 MatMatMultNum 2 1.0 2.7604e-01 1.2 7.63e+06 1.2 7.8e+01 2.1e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 197 MatPtAPSymbolic 2 1.0 1.9820e+00 1.0 0.00e+00 0.0 4.8e+02 3.3e+04 1.4e+01 3 0 3 19 2 3 0 3 19 2 0 MatPtAPNumeric 2 1.0 2.4175e+00 1.0 7.44e+07 1.3 3.6e+02 4.0e+04 1.2e+01 4 28 2 18 2 4 28 2 18 2 212 MatTrnMatMultSym 1 1.0 5.9224e-01 1.0 0.00e+00 0.0 2.7e+02 1.9e+04 1.3e+01 1 0 2 6 2 1 0 2 6 2 0 MatGetLocalMat 7 1.0 1.9364e-02 3.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 6 1.0 3.4651e-01 1.4 0.00e+00 0.0 5.5e+02 3.0e+04 0.0e+00 1 0 4 20 0 1 0 4 20 0 0 VecDot 36 1.0 1.1391e+00 1.1 7.62e+05 1.1 0.0e+00 0.0e+00 3.6e+01 2 0 0 0 6 2 0 0 0 6 5 VecMDot 20 1.0 6.8289e-01 1.7 1.27e+06 1.2 0.0e+00 0.0e+00 2.0e+01 1 1 0 0 3 1 1 0 0 3 14 VecTDot 74 1.0 1.7820e+00 1.2 1.16e+06 1.1 0.0e+00 0.0e+00 7.4e+01 3 0 0 0 11 3 0 0 0 12 5 VecNorm 68 1.0 1.9626e+00 1.3 1.01e+06 1.1 0.0e+00 0.0e+00 6.8e+01 3 0 0 0 10 3 0 0 0 11 4 VecScale 28 1.0 5.3310e-04 1.1 1.90e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2690 VecCopy 116 1.0 1.2895e-03 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 179 1.0 5.4996e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 83 1.0 8.7602e-03 3.2 1.35e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1166 VecAYPX 237 1.0 1.2368e-02 2.3 2.09e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1273 VecAXPBYCZ 68 1.0 3.1860e-03 1.4 1.96e+06 1.2 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4623 VecMAXPY 22 1.0 4.9980e-03 1.8 1.50e+06 1.2 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2254 VecAssemblyBegin 61 1.0 1.4837e+00 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 2 0 0 0 9 2 0 0 0 9 0 VecAssemblyEnd 61 1.0 7.0656e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 180 1.0 6.1746e-03 1.6 1.04e+06 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1263 VecScatterBegin 327 1.0 4.6938e-02 2.6 0.00e+00 0.0 1.2e+04 2.8e+03 0.0e+00 0 0 79 41 0 0 0 79 41 0 0 VecScatterEnd 327 1.0 7.2999e+00 1.2 3.67e+04 4.2 0.0e+00 0.0e+00 0.0e+00 12 0 0 0 0 12 0 0 0 0 0 VecSetRandom 2 1.0 8.7896e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecNormalize 28 1.0 8.3304e-01 1.4 5.71e+05 1.1 0.0e+00 0.0e+00 2.8e+01 1 0 0 0 4 1 0 0 0 4 5 SFSetGraph 19 1.0 1.4938e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 19 1.0 1.1462e+00 1.2 0.00e+00 0.0 1.2e+03 3.5e+02 1.9e+01 2 0 9 1 3 2 0 9 1 3 0 SFBcastOpBegin 302 1.0 4.4234e-02 2.9 0.00e+00 0.0 1.1e+04 2.9e+03 0.0e+00 0 0 77 40 0 0 0 77 40 0 0 SFBcastOpEnd 302 1.0 6.9413e+00 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 11 0 0 0 0 11 0 0 0 0 0 SFReduceBegin 35 1.0 1.3252e-0213.9 0.00e+00 0.0 7.8e+02 1.2e+03 0.0e+00 0 0 5 1 0 0 0 5 1 0 0 SFReduceEnd 35 1.0 6.5582e-01 1.3 3.67e+04 4.2 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 SFPack 337 1.0 4.6368e-03 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 337 1.0 1.0536e-0211.6 3.67e+04 4.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 11 KSPSetUp 7 1.0 1.8282e+00 1.0 1.41e+07 1.2 7.8e+02 3.5e+03 7.2e+01 3 6 5 3 11 3 6 5 3 11 57 KSPSolve 1 1.0 2.7168e+01 1.0 2.89e+08 1.4 1.4e+04 5.3e+03 5.5e+02 48 99 97 93 85 48 99 97 93 85 66 KSPGMRESOrthog 20 1.0 6.8554e-01 1.7 2.53e+06 1.2 0.0e+00 0.0e+00 2.0e+01 1 1 0 0 3 1 1 0 0 3 28 PCGAMGGraph_AGG 2 1.0 2.1372e+00 1.0 6.90e+05 1.2 3.9e+02 4.1e+02 3.8e+01 4 0 3 0 6 4 0 3 0 6 2 PCGAMGCoarse_AGG 2 1.0 1.3542e+00 1.1 0.00e+00 0.0 1.0e+03 6.1e+03 2.9e+01 2 0 7 8 4 2 0 7 8 5 0 PCGAMGProl_AGG 2 1.0 5.9113e+00 1.0 0.00e+00 0.0 2.4e+03 1.5e+03 1.9e+02 10 0 16 5 29 10 0 16 5 29 0 PCGAMGPOpt_AGG 2 1.0 3.3770e+00 1.0 2.41e+07 1.2 1.3e+03 5.5e+03 8.2e+01 6 10 9 9 13 6 10 9 9 13 52 GAMG: createProl 2 1.0 1.2669e+01 1.0 2.48e+07 1.2 5.0e+03 3.3e+03 3.4e+02 22 10 35 21 52 22 10 35 21 53 14 Graph 4 1.0 2.1369e+00 1.0 6.90e+05 1.2 3.9e+02 4.1e+02 3.8e+01 4 0 3 0 6 4 0 3 0 6 2 MIS/Agg 2 1.0 4.6423e-01 1.1 0.00e+00 0.0 5.5e+02 7.5e+02 8.0e+00 1 0 4 1 1 1 0 4 1 1 0 SA: col data 2 1.0 5.1979e+00 1.0 0.00e+00 0.0 2.2e+03 1.3e+03 1.7e+02 9 0 15 3 26 9 0 15 3 26 0 SA: frmProl0 2 1.0 4.5084e-01 1.1 0.00e+00 0.0 2.0e+02 4.7e+03 1.2e+01 1 0 1 1 2 1 0 1 1 2 0 SA: smooth 2 1.0 1.4314e+00 1.0 8.24e+06 1.2 4.8e+02 8.8e+03 2.8e+01 2 3 3 5 4 2 3 3 5 4 41 GAMG: partLevel 2 1.0 6.0011e+00 1.0 7.44e+07 1.3 9.3e+02 3.4e+04 8.1e+01 11 28 6 40 12 11 28 6 40 13 85 repartition 1 1.0 1.6266e+00 1.0 0.00e+00 0.0 9.4e+01 2.2e+04 5.5e+01 3 0 1 3 8 3 0 1 3 9 0 Invert-Sort 1 1.0 2.0003e-01 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+00 0 0 0 0 1 0 0 0 0 1 0 Move A 1 1.0 5.2812e-01 1.1 0.00e+00 0.0 3.5e+01 5.6e+04 1.6e+01 1 0 0 2 2 1 0 0 2 2 0 Move P 1 1.0 3.7939e-01 1.1 0.00e+00 0.0 1.4e+01 4.8e+02 1.7e+01 1 0 0 0 3 1 0 0 0 3 0 PCSetUp 2 1.0 2.1335e+01 1.0 1.71e+08 1.8 6.8e+03 7.6e+03 5.0e+02 36 48 46 64 77 36 48 46 64 78 41 PCSetUpOnBlocks 17 1.0 7.1405e-012989.9 7.91e+07 0.0 0.0e+00 0.0e+00 0.0e+00 0 4 0 0 0 0 4 0 0 0 111 PCApply 39 1.0 5.0841e+00 1.1 1.83e+08 2.0 6.8e+03 3.0e+03 4.0e+00 9 48 47 25 1 9 48 47 25 1 173 ------------------------------------------------------------------------------------------------------------------------ Memory usage is given in bytes: Object Type Creations Destructions Memory Descendants' Mem. Reports information only for process 0. --- Event Stage 0: Main Stage Matrix 68 68 26320224 0. Matrix Coarsen 2 2 1264 0. Matrix Null Space 1 1 704 0. Index Set 55 55 119712 0. IS L to G Mapping 6 6 89364 0. Vec Scatter 17 17 13872 0. Vector 185 185 4413304 0. Star Forest Graph 19 19 21888 0. Krylov Solver 9 9 72064 0. Preconditioner 9 9 9148 0. Viewer 3 2 1696 0. PetscRandom 4 4 2616 0. ======================================================================================================================== Average time to get PetscTime(): 8e-08 Average time for MPI_Barrier(): 0.0215095 Average time for zero size MPI_Send(): 0.00299554 #PETSc Option Table entries: --ndofs 80000 --problem_type elasticity --scaling_type strong -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -matptap_via scalable -mg_levels_esteig_ksp_type cg -mg_levels_ksp_type chebyshev -mg_levels_pc_type jacobi -options_left -pc_gamg_coarse_eq_limit 1000 -pc_type gamg #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE_core --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --prefix=/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2021-05-01 12:26:37 on reproducible Machine characteristics: Linux-4.19.0-16-arm64-aarch64-with-glibc2.31 Using PETSc directory: /usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/aarch64-linux-gnu/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/aarch64-linux-gnu -L/lib/aarch64-linux-gnu -lHYPRE_core -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lumfpack -lamd -lcholmod -lklu -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lutil -lgfortran -lm -lrt -lz -lgfortran -lm -lgfortran -lgcc_s -lpthread -lstdc++ -ldl ----------------------------------------- #PETSc Option Table entries: --ndofs 80000 --problem_type elasticity --scaling_type strong -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -matptap_via scalable -mg_levels_esteig_ksp_type cg -mg_levels_ksp_type chebyshev -mg_levels_pc_type jacobi -options_left -pc_gamg_coarse_eq_limit 1000 -pc_type gamg #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 80000 Option left: name:--problem_type value: elasticity Option left: name:--scaling_type value: strong ==== poisson weak scaling (8 processes with ndofs=10000) ==== UnitCube (42x42x42) to be refined 0 times ---------------------------------------------------------------- Test problem summary dolfinx version: 2019.2.9.99 dolfinx hash: unknown ufl hash: ac78d56bf5c7fcc5585cc7f0654188e75f1c73b1 petsc version: Petsc Release Version 3.14.5, Mar 03, 2021 Problem type: poisson Scaling type: weak Num processes: 8 Num cells 444528 Total degrees of freedom: 79507 Average degrees of freedom per process: 9938 ---------------------------------------------------------------- KSP Object: 8 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 8 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=79507, cols=79507 total: nonzeros=1148743, allocated nonzeros=1148743 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_AVG] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------- Build BoxMesh | 1 27.656128 27.656128 Build dofmap data | 2 0.890244 1.780487 Build sparsity | 1 0.498553 0.498553 Compute SCOTCH graph re-ordering | 2 0.025674 0.051348 Compute connectivity 2-3 | 1 0.026013 0.026013 Compute dof reordering map | 2 0.137486 0.274973 Compute entities of dim = 1 | 1 2.655607 2.655607 Compute entities of dim = 2 | 1 2.714975 2.714975 Compute graph partition (SCOTCH) | 1 24.245441 24.245441 Compute local part of mesh dual graph | 1 0.269759 0.269759 Compute local-to-local map | 1 0.012953 0.012953 Compute non-local part of mesh dual graph | 1 0.148952 0.148952 Compute-local-to-global links for global/local adjacency list | 1 0.001715 0.001715 Distribute in graph creation AdjacencyList | 1 0.127775 0.127775 Extract partition boundaries from SCOTCH graph | 1 0.013901 0.013901 Fetch float data from remote processes | 1 0.125574 0.125574 Get SCOTCH graph data | 1 0.000020 0.000020 Init dofmap from element dofmap | 2 0.081247 0.162495 PETSc Krylov solver | 1 33.595803 33.595803 SCOTCH: call SCOTCH_dgraphBuild | 1 0.038271 0.038271 SCOTCH: call SCOTCH_dgraphHalo | 1 0.035368 0.035368 SCOTCH: call SCOTCH_dgraphPart | 1 24.134741 24.134741 SCOTCH: call SCOTCH_graphBuild | 2 0.000037 0.000074 SCOTCH: call SCOTCH_graphOrder | 2 0.024316 0.048631 SparsityPattern::assemble | 1 0.773049 0.773049 TOPOLOGY: Create sets | 1 0.172460 0.172460 ZZZ Assemble | 1 4.431418 4.431418 ZZZ Assemble matrix | 1 0.648133 0.648133 ZZZ Assemble vector | 1 0.122056 0.122056 ZZZ Create Mesh | 1 27.657099 27.657099 ZZZ Create mesh entity permutations | 1 5.552085 5.552085 ZZZ FunctionSpace | 1 0.881358 0.881358 ZZZ Solve | 1 33.726850 33.726850 *** Number of Krylov iterations: 7 *** Solution norm: 14540.9 ************************************************************************************************************************ *** WIDEN YOUR WINDOW TO 120 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** ************************************************************************************************************************ ---------------------------------------------- PETSc Performance Summary: ---------------------------------------------- /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 8 processors, by pbuilder2 Sat Aug 27 15:39:04 2022 Using Petsc Release Version 3.14.5, Mar 03, 2021 Max Max/Min Avg Total Time (sec): 7.256e+01 1.000 7.256e+01 Objects: 3.800e+01 1.000 3.800e+01 Flop: 3.564e+06 1.041 3.514e+06 2.811e+07 Flop/sec: 4.912e+04 1.041 4.843e+04 3.874e+05 MPI Messages: 1.260e+02 1.750 9.900e+01 7.920e+02 MPI Message Lengths: 5.788e+05 1.458 4.809e+03 3.809e+06 MPI Reductions: 6.600e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flop and VecAXPY() for complex vectors of length N --> 8N flop Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 7.2557e+01 100.0% 2.8111e+07 100.0% 7.920e+02 100.0% 4.809e+03 100.0% 5.900e+01 89.4% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 4 1.0 4.8661e-01 3.0 0.00e+00 0.0 1.8e+02 4.0e+00 4.0e+00 0 0 22 0 6 0 0 22 0 7 0 BuildTwoSidedF 1 1.0 3.7940e-0113.1 0.00e+00 0.0 8.8e+01 1.3e+04 1.0e+00 0 0 11 30 2 0 0 11 30 2 0 MatMult 7 1.0 1.9352e-01 1.4 1.97e+06 1.0 3.1e+02 3.3e+03 0.0e+00 0 55 39 27 0 0 55 39 27 0 80 MatConvert 1 1.0 3.8647e-01 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 6 0 0 0 0 7 0 MatAssemblyBegin 2 1.0 3.8959e-01 6.7 0.00e+00 0.0 8.8e+01 1.3e+04 1.0e+00 0 0 11 30 2 0 0 11 30 2 0 MatAssemblyEnd 2 1.0 4.4664e-01 1.2 7.42e+03 1.7 8.8e+01 8.3e+02 9.0e+00 1 0 11 2 14 1 0 11 2 15 0 MatGetRowIJ 2 1.0 4.8600e-06 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatZeroEntries 1 1.0 1.4972e-04 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 7.7162e-021543.2 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 2 0 0 0 0 2 0 VecTDot 14 1.0 4.0240e-01 1.2 2.83e+05 1.1 0.0e+00 0.0e+00 1.4e+01 0 8 0 0 21 0 8 0 0 24 6 VecNorm 9 1.0 2.7137e-01 1.4 1.82e+05 1.1 0.0e+00 0.0e+00 9.0e+00 0 5 0 0 14 0 5 0 0 15 5 VecCopy 2 1.0 6.5160e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 11 1.0 8.9180e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 7.9638e-04 1.4 2.83e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 2795 VecAYPX 6 1.0 3.2116e-04 1.3 1.21e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 2971 VecScatterBegin 10 1.0 1.2762e-0215.9 0.00e+00 0.0 4.4e+02 2.7e+03 0.0e+00 0 0 56 31 0 0 0 56 31 0 0 VecScatterEnd 10 1.0 2.9601e-01 1.7 1.10e+03 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 2.8300e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 1.9959e-01 1.3 0.00e+00 0.0 2.6e+02 4.8e+02 3.0e+00 0 0 33 3 5 0 0 33 3 5 0 SFBcastOpBegin 9 1.0 8.5346e-04 1.5 0.00e+00 0.0 4.0e+02 2.8e+03 0.0e+00 0 0 50 29 0 0 0 50 29 0 0 SFBcastOpEnd 9 1.0 2.5093e-01 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 1 1.0 1.2093e-02296.7 0.00e+00 0.0 4.4e+01 1.2e+03 0.0e+00 0 0 6 1 0 0 0 6 1 0 0 SFReduceEnd 1 1.0 7.1522e-02 4.5 1.10e+03 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 10 1.0 1.8962e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 10 1.0 6.9800e-05 1.3 1.10e+03 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 96 KSPSetUp 1 1.0 1.1132e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 3.3560e+01 1.0 2.82e+06 1.0 3.1e+02 3.3e+03 2.6e+01 46 79 39 27 39 46 79 39 27 44 1 PCSetUp 1 1.0 1.9110e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 26 0 0 0 6 26 0 0 0 7 0 PCApply 8 1.0 1.3734e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 19 0 0 0 0 19 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Memory usage is given in bytes: Object Type Creations Destructions Memory Descendants' Mem. Reports information only for process 0. --- Event Stage 0: Main Stage Matrix 4 4 2119088 0. Index Set 6 6 17368 0. IS L to G Mapping 4 4 175988 0. Vec Scatter 3 3 2448 0. Vector 14 14 374624 0. Star Forest Graph 3 3 3456 0. Krylov Solver 1 1 1488 0. Preconditioner 1 1 1456 0. Viewer 2 1 848 0. ======================================================================================================================== Average time to get PetscTime(): 9e-08 Average time for MPI_Barrier(): 0.0320015 Average time for zero size MPI_Send(): 0.0119993 #PETSc Option Table entries: --ndofs 10000 --problem_type poisson --scaling_type weak -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -options_left -pc_hypre_boomeramg_strong_threshold 0.5 -pc_hypre_type boomeramg -pc_type hypre #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE_core --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --prefix=/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2021-05-01 12:26:37 on reproducible Machine characteristics: Linux-4.19.0-16-arm64-aarch64-with-glibc2.31 Using PETSc directory: /usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/aarch64-linux-gnu/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/aarch64-linux-gnu -L/lib/aarch64-linux-gnu -lHYPRE_core -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lumfpack -lamd -lcholmod -lklu -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lutil -lgfortran -lm -lrt -lz -lgfortran -lm -lgfortran -lgcc_s -lpthread -lstdc++ -ldl ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 --problem_type poisson --scaling_type weak -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -options_left -pc_hypre_boomeramg_strong_threshold 0.5 -pc_hypre_type boomeramg -pc_type hypre #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 10000 Option left: name:--problem_type value: poisson Option left: name:--scaling_type value: weak ==== poisson strong scaling (8 processes with ndofs=80000) ==== UnitCube (42x42x42) to be refined 0 times ---------------------------------------------------------------- Test problem summary dolfinx version: 2019.2.9.99 dolfinx hash: unknown ufl hash: ac78d56bf5c7fcc5585cc7f0654188e75f1c73b1 petsc version: Petsc Release Version 3.14.5, Mar 03, 2021 Problem type: poisson Scaling type: strong Num processes: 8 Num cells 444528 Total degrees of freedom: 79507 Average degrees of freedom per process: 9938 ---------------------------------------------------------------- KSP Object: 8 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 8 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical linear system matrix = precond matrix: Mat Object: 8 MPI processes type: mpiaij rows=79507, cols=79507 total: nonzeros=1148743, allocated nonzeros=1148743 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_AVG] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------- Build BoxMesh | 1 29.833387 29.833387 Build dofmap data | 2 0.742409 1.484818 Build sparsity | 1 0.284206 0.284206 Compute SCOTCH graph re-ordering | 2 0.021235 0.042471 Compute connectivity 2-3 | 1 0.016978 0.016978 Compute dof reordering map | 2 0.139454 0.278908 Compute entities of dim = 1 | 1 2.750982 2.750982 Compute entities of dim = 2 | 1 2.500194 2.500194 Compute graph partition (SCOTCH) | 1 26.664673 26.664673 Compute local part of mesh dual graph | 1 0.306722 0.306722 Compute local-to-local map | 1 0.014390 0.014390 Compute non-local part of mesh dual graph | 1 0.202300 0.202300 Compute-local-to-global links for global/local adjacency list | 1 0.001704 0.001704 Distribute in graph creation AdjacencyList | 1 0.093075 0.093075 Extract partition boundaries from SCOTCH graph | 1 0.008629 0.008629 Fetch float data from remote processes | 1 0.088771 0.088771 Get SCOTCH graph data | 1 0.000021 0.000021 Init dofmap from element dofmap | 2 0.080447 0.160893 PETSc Krylov solver | 1 33.895442 33.895442 SCOTCH: call SCOTCH_dgraphBuild | 1 0.047251 0.047251 SCOTCH: call SCOTCH_dgraphHalo | 1 0.052573 0.052573 SCOTCH: call SCOTCH_dgraphPart | 1 26.531832 26.531832 SCOTCH: call SCOTCH_graphBuild | 2 0.000789 0.001578 SCOTCH: call SCOTCH_graphOrder | 2 0.019384 0.038768 SparsityPattern::assemble | 1 0.677555 0.677555 TOPOLOGY: Create sets | 1 0.212206 0.212206 ZZZ Assemble | 1 3.949711 3.949711 ZZZ Assemble matrix | 1 0.647301 0.647301 ZZZ Assemble vector | 1 0.108553 0.108553 ZZZ Create Mesh | 1 29.834261 29.834261 ZZZ Create mesh entity permutations | 1 5.426393 5.426393 ZZZ FunctionSpace | 1 0.731737 0.731737 ZZZ Solve | 1 34.100214 34.100214 *** Number of Krylov iterations: 8 *** Solution norm: 14540.9 ************************************************************************************************************************ *** WIDEN YOUR WINDOW TO 120 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** ************************************************************************************************************************ ---------------------------------------------- PETSc Performance Summary: ---------------------------------------------- /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 8 processors, by pbuilder2 Sat Aug 27 15:41:43 2022 Using Petsc Release Version 3.14.5, Mar 03, 2021 Max Max/Min Avg Total Time (sec): 7.435e+01 1.000 7.434e+01 Objects: 3.800e+01 1.000 3.800e+01 Flop: 4.008e+06 1.067 3.912e+06 3.130e+07 Flop/sec: 5.392e+04 1.068 5.263e+04 4.210e+05 MPI Messages: 1.330e+02 2.333 8.550e+01 6.840e+02 MPI Message Lengths: 6.132e+05 1.474 5.552e+03 3.798e+06 MPI Reductions: 6.900e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flop and VecAXPY() for complex vectors of length N --> 8N flop Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 7.4338e+01 100.0% 3.1296e+07 100.0% 6.840e+02 100.0% 5.552e+03 100.0% 6.200e+01 89.9% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 4 1.0 3.2846e-01 2.2 0.00e+00 0.0 1.4e+02 4.0e+00 4.0e+00 0 0 21 0 6 0 0 21 0 6 0 BuildTwoSidedF 1 1.0 2.0137e-0111.4 0.00e+00 0.0 7.2e+01 1.5e+04 1.0e+00 0 0 11 28 1 0 0 11 28 2 0 MatMult 8 1.0 1.6926e-01 1.5 2.27e+06 1.1 2.9e+02 3.8e+03 0.0e+00 0 57 42 29 0 0 57 42 29 0 105 MatConvert 1 1.0 4.6779e-01 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 1 0 0 0 6 1 0 0 0 6 0 MatAssemblyBegin 2 1.0 2.2662e-01 4.2 0.00e+00 0.0 7.2e+01 1.5e+04 1.0e+00 0 0 11 28 1 0 0 11 28 2 0 MatAssemblyEnd 2 1.0 4.5675e-01 1.1 7.75e+03 1.8 7.2e+01 9.5e+02 9.0e+00 1 0 11 2 13 1 0 11 2 15 0 MatGetRowIJ 2 1.0 5.0600e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatZeroEntries 1 1.0 1.3048e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 3.2009e-02 2.7 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 VecTDot 16 1.0 3.4876e-01 1.5 3.28e+05 1.1 0.0e+00 0.0e+00 1.6e+01 0 8 0 0 23 0 8 0 0 26 7 VecNorm 10 1.0 2.9700e-01 2.5 2.05e+05 1.1 0.0e+00 0.0e+00 1.0e+01 0 5 0 0 14 0 5 0 0 16 5 VecCopy 2 1.0 6.7820e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 12 1.0 8.7300e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 16 1.0 8.8398e-04 1.4 3.28e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 2878 VecAYPX 7 1.0 4.2066e-04 1.6 1.43e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 4 0 0 0 0 4 0 0 0 2646 VecScatterBegin 11 1.0 1.0953e-03 1.8 0.00e+00 0.0 4.0e+02 3.1e+03 0.0e+00 0 0 58 33 0 0 0 58 33 0 0 VecScatterEnd 11 1.0 2.5244e-01 1.7 1.15e+03 1.8 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 3.0100e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 2.1548e-01 1.2 0.00e+00 0.0 2.2e+02 5.5e+02 3.0e+00 0 0 32 3 4 0 0 32 3 5 0 SFBcastOpBegin 10 1.0 9.2992e-04 1.8 0.00e+00 0.0 3.6e+02 3.3e+03 0.0e+00 0 0 53 31 0 0 0 53 31 0 0 SFBcastOpEnd 10 1.0 2.4002e-01 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 1 1.0 6.7320e-05 2.3 0.00e+00 0.0 3.6e+01 1.4e+03 0.0e+00 0 0 5 1 0 0 0 5 1 0 0 SFReduceEnd 1 1.0 3.4085e-02 2.8 1.15e+03 1.8 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 11 1.0 2.1014e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 11 1.0 6.2620e-05 1.2 1.15e+03 1.8 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 100 KSPSetUp 1 1.0 1.1250e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 3.3864e+01 1.0 3.25e+06 1.1 2.9e+02 3.8e+03 2.9e+01 46 81 42 29 42 46 81 42 29 47 1 PCSetUp 1 1.0 2.0112e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 27 0 0 0 6 27 0 0 0 6 0 PCApply 9 1.0 1.3217e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 18 0 0 0 0 18 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Memory usage is given in bytes: Object Type Creations Destructions Memory Descendants' Mem. Reports information only for process 0. --- Event Stage 0: Main Stage Matrix 4 4 2115620 0. Index Set 6 6 18764 0. IS L to G Mapping 4 4 176904 0. Vec Scatter 3 3 2448 0. Vector 14 14 377080 0. Star Forest Graph 3 3 3456 0. Krylov Solver 1 1 1488 0. Preconditioner 1 1 1456 0. Viewer 2 1 848 0. ======================================================================================================================== Average time to get PetscTime(): 8.4e-08 Average time for MPI_Barrier(): 0.0415532 Average time for zero size MPI_Send(): 0.00744254 #PETSc Option Table entries: --ndofs 80000 --problem_type poisson --scaling_type strong -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -options_left -pc_hypre_boomeramg_strong_threshold 0.5 -pc_hypre_type boomeramg -pc_type hypre #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=aarch64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE_core --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --prefix=/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real --PETSC_ARCH=aarch64-linux-gnu-real CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2021-05-01 12:26:37 on reproducible Machine characteristics: Linux-4.19.0-16-arm64-aarch64-with-glibc2.31 Using PETSc directory: /usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/petsc-jEYJcE/petsc-3.14.5+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.14/aarch64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/aarch64-linux-gnu/hdf5/openmpi -L/usr/lib/aarch64-linux-gnu/openmpi/lib -L/usr/lib/aarch64-linux-gnu/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/aarch64-linux-gnu -L/lib/aarch64-linux-gnu -lHYPRE_core -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lumfpack -lamd -lcholmod -lklu -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lutil -lgfortran -lm -lrt -lz -lgfortran -lm -lgfortran -lgcc_s -lpthread -lstdc++ -ldl ----------------------------------------- #PETSc Option Table entries: --ndofs 80000 --problem_type poisson --scaling_type strong -ksp_rtol 1.0e-8 -ksp_type cg -ksp_view -log_view -options_left -pc_hypre_boomeramg_strong_threshold 0.5 -pc_hypre_type boomeramg -pc_type hypre #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 80000 Option left: name:--problem_type value: poisson Option left: name:--scaling_type value: strong make[1]: Leaving directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/fenicsx-performance-tests-0.0\~git20210119.80e82ac/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' /usr/bin/cmake -S"/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/src" -B"/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu" --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/fenicsx-performance-tests-0.0~git20210119.80e82ac/debian/tmp/usr/bin/dolfinx-scaling-test -- Set runtime path of "/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/debian/tmp/usr/bin/dolfinx-scaling-test" to "" make[1]: Leaving directory '/build/fenicsx-performance-tests-0.0~git20210119.80e82ac/obj-aarch64-linux-gnu' dh_install -O--buildsystem=cmake -O--sourcedirectory=src dh_installdocs -O--buildsystem=cmake -O--sourcedirectory=src dh_installchangelogs -O--buildsystem=cmake -O--sourcedirectory=src dh_installman -O--buildsystem=cmake -O--sourcedirectory=src dh_installsystemduser -O--buildsystem=cmake -O--sourcedirectory=src dh_perl -O--buildsystem=cmake -O--sourcedirectory=src dh_link -O--buildsystem=cmake -O--sourcedirectory=src dh_strip_nondeterminism -O--buildsystem=cmake -O--sourcedirectory=src dh_compress -O--buildsystem=cmake -O--sourcedirectory=src dh_fixperms -O--buildsystem=cmake -O--sourcedirectory=src dh_missing -O--buildsystem=cmake -O--sourcedirectory=src dh_dwz -a -O--buildsystem=cmake -O--sourcedirectory=src dh_strip -a -O--buildsystem=cmake -O--sourcedirectory=src dh_makeshlibs -a -O--buildsystem=cmake -O--sourcedirectory=src dh_shlibdeps -a -O--buildsystem=cmake -O--sourcedirectory=src dh_installdeb -O--buildsystem=cmake -O--sourcedirectory=src dh_gencontrol -O--buildsystem=cmake -O--sourcedirectory=src dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.0~git20210119.80e82ac-1_all.deb'. dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.0~git20210119.80e82ac-1_arm64.deb'. dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.0~git20210119.80e82ac-1_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../fenicsx-performance-tests_0.0~git20210119.80e82ac-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/22285/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/22285/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/22285 and its subdirectories I: Current time: Sat Aug 27 15:43:15 +14 2022 I: pbuilder-time-stamp: 1661564595