I: pbuilder: network access will be disabled during build I: Current time: Sun Jan 7 11:55:24 +14 2024 I: pbuilder-time-stamp: 1704578124 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [amp_0.6.1-1.dsc] I: copying [./amp_0.6.1.orig.tar.gz] I: copying [./amp_0.6.1-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.GkS6sqaI/trustedkeys.kbx': General error gpgv: Signature made Sun Oct 28 15:09:16 2018 gpgv: using RSA key 8B7868786C33E5C64C4D0A480816B9E18C762BAD gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./amp_0.6.1-1.dsc dpkg-source: info: extracting amp in amp-0.6.1 dpkg-source: info: unpacking amp_0.6.1.orig.tar.gz dpkg-source: info: unpacking amp_0.6.1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_Makefile.patch dpkg-source: info: applying 03_tools.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/D01_modify_environment starting debug: Running on codethink02-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 6 21:55 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.1.4(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' DIRSTACK=() DISTRIBUTION=bullseye EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=80e4560187f54e74bb1d865d5073c277 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1770174 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.mO1zWMZo/pbuilderrc_brZG --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.mO1zWMZo/b2 --logfile b2/build.log amp_0.6.1-1.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.104:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Mar 27 2022 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 7 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 7 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 64856 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 182496 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 93744 Apr 10 2022 gzip -rwxr-xr-x 1 root root 18440 Nov 7 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 157864 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Jan 20 2022 more -rwsr-xr-x 1 root root 51360 Jan 20 2022 mount -rwxr-xr-x 1 root root 14496 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 7 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 9 Jan 6 21:55 sh -> /bin/bash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jan 20 2022 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 17 2021 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30880 Jan 20 2022 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 7 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 11), dh-python, gfortran, python3-all-dev, python3-ase (>= 3.9.0~), python3-matplotlib, python3-nose, python3-numpy, python3-scipy, python3-setuptools, python3-pexpect, python3-zmq, openssh-server dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 17734 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 11); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ase (>= 3.9.0~); however: Package python3-ase is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-nose; however: Package python3-nose is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pexpect; however: Package python3-pexpect is not installed. pbuilder-satisfydepends-dummy depends on python3-zmq; however: Package python3-zmq is not installed. pbuilder-satisfydepends-dummy depends on openssh-server; however: Package openssh-server is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcbor0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfreetype6{a} libgfortran-10-dev{a} libgfortran5{a} libicu67{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmpdec3{a} libncurses6{a} libnorm1{a} libpgm-5.3-0{a} libpipeline1{a} libpng16-16{a} libprocps8{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsodium23{a} libsub-override-perl{a} libtiff5{a} libtool{a} libuchardet0{a} libwebp6{a} libwebpdemux2{a} libwebpmux3{a} libwrap0{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} libzmq5{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} openssh-client{a} openssh-server{a} openssh-sftp-server{a} po-debconf{a} procps{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-ase{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-kiwisolver{a} python3-lib2to3{a} python3-matplotlib{a} python3-minimal{a} python3-nose{a} python3-numpy{a} python3-pexpect{a} python3-pil{a} python3-pkg-resources{a} python3-ptyprocess{a} python3-pyparsing{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-spglib{a} python3-zmq{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} runit-helper{a} sensible-utils{a} ttf-bitstream-vera{a} tzdata{a} ucf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libgpm2 libltdl-dev libmail-sendmail-perl libpam-elogind libpam-systemd lynx ncurses-term psmisc python3-olefile python3-tk wget xauth 0 packages upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 74.8 MB of archives. After unpacking 282 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-8+deb11u1 [142 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-minimal arm64 3.9.2-1 [797 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2+deb11u5 [84.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 python3.9-minimal arm64 3.9.2-1 [1884 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 python3-minimal arm64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 mailcap all 3.69 [31.7 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 mime-support all 3.66 [10.9 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 tzdata all 2021a-1+deb11u10 [286 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libmpdec3 arm64 2.5.1-1 [84.4 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-stdlib arm64 3.9.2-1 [1658 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 python3.9 arm64 3.9.2-1 [466 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 libpython3-stdlib arm64 3.9.2-3 [21.4 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 python3 arm64 3.9.2-3 [37.9 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2+deb11u2 [93.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 libprocps8 arm64 2:3.3.17-5 [61.9 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 procps arm64 2:3.3.17-5 [497 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3+deb11u1 [273 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3+deb11u1 [123 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3+deb11u1 [69.2 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libmd0 arm64 1.0.3-3 [27.9 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 libbsd0 arm64 0.11.3-1+deb11u1 [106 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 libedit2 arm64 3.1-20191231-2+b1 [92.1 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libcbor0 arm64 0.5.0+dfsg-2 [20.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libfido2-1 arm64 1.6.0-2 [50.2 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 openssh-client arm64 1:8.4p1-5+deb11u2 [895 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 ucf all 3.0043 [74.0 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7+deb11u4 [629 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 python3-distutils all 3.9.2-1 [143 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-2 [164 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 fonts-lyx all 2.3.6-1 [205 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 gfortran arm64 4:10.2.1-1 [1424 B] Get: 67 http://deb.debian.org/debian bullseye/main arm64 libblas3 arm64 3.9.0-3+deb11u1 [100 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 libdeflate0 arm64 1.7-1 [47.7 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 libexpat1-dev arm64 2.2.10-2+deb11u5 [128 kB] Get: 71 http://deb.debian.org/debian bullseye/main arm64 libpng16-16 arm64 1.6.37-3 [289 kB] Get: 72 http://deb.debian.org/debian bullseye/main arm64 libfreetype6 arm64 2.10.4+dfsg-1+deb11u1 [393 kB] Get: 73 http://deb.debian.org/debian bullseye/main arm64 libimagequant0 arm64 2.12.2-1.1 [30.3 kB] Get: 74 http://deb.debian.org/debian bullseye/main arm64 libjbig0 arm64 2.1-3.1+b2 [27.8 kB] Get: 75 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 76 http://deb.debian.org/debian bullseye/main arm64 libjs-bootstrap all 3.4.1+dfsg-2 [173 kB] Get: 77 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 78 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u1 [232 kB] Get: 79 http://deb.debian.org/debian bullseye/main arm64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 80 http://deb.debian.org/debian bullseye/main arm64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 81 http://deb.debian.org/debian bullseye/main arm64 liblapack3 arm64 3.9.0-3+deb11u1 [1538 kB] Get: 82 http://deb.debian.org/debian bullseye/main arm64 liblbfgsb0 arm64 3.0+dfsg.3-9 [24.5 kB] Get: 83 http://deb.debian.org/debian bullseye/main arm64 liblcms2-2 arm64 2.12~rc1-2 [140 kB] Get: 84 http://deb.debian.org/debian bullseye/main arm64 libnorm1 arm64 1.5.9+dfsg-2 [202 kB] Get: 85 http://deb.debian.org/debian bullseye/main arm64 libpgm-5.3-0 arm64 5.3.128~dfsg-2 [152 kB] Get: 86 http://deb.debian.org/debian bullseye/main arm64 libpython3.9 arm64 3.9.2-1 [1556 kB] Get: 87 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-dev arm64 3.9.2-1 [3835 kB] Get: 88 http://deb.debian.org/debian bullseye/main arm64 libpython3-dev arm64 3.9.2-3 [21.7 kB] Get: 89 http://deb.debian.org/debian bullseye/main arm64 libpython3-all-dev arm64 3.9.2-3 [1068 B] Get: 90 http://deb.debian.org/debian bullseye/main arm64 libsodium23 arm64 1.0.18-1 [119 kB] Get: 91 http://deb.debian.org/debian bullseye/main arm64 libwebp6 arm64 0.6.1-2.1+deb11u2 [244 kB] Get: 92 http://deb.debian.org/debian bullseye/main arm64 libtiff5 arm64 4.2.0-1+deb11u4 [278 kB] Get: 93 http://deb.debian.org/debian bullseye/main arm64 libwebpdemux2 arm64 0.6.1-2.1+deb11u2 [87.6 kB] Get: 94 http://deb.debian.org/debian bullseye/main arm64 libwebpmux3 arm64 0.6.1-2.1+deb11u2 [96.7 kB] Get: 95 http://deb.debian.org/debian bullseye/main arm64 libwrap0 arm64 7.6.q-31 [58.7 kB] Get: 96 http://deb.debian.org/debian bullseye/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB] Get: 97 http://deb.debian.org/debian bullseye/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 98 http://deb.debian.org/debian bullseye/main arm64 libxcb1 arm64 1.14-3 [138 kB] Get: 99 http://deb.debian.org/debian bullseye/main arm64 libzmq5 arm64 4.3.4-1 [247 kB] Get: 100 http://deb.debian.org/debian bullseye/main arm64 openssh-sftp-server arm64 1:8.4p1-5+deb11u2 [50.0 kB] Get: 101 http://deb.debian.org/debian bullseye/main arm64 runit-helper all 2.10.3 [7808 B] Get: 102 http://deb.debian.org/debian bullseye/main arm64 openssh-server arm64 1:8.4p1-5+deb11u2 [361 kB] Get: 103 http://deb.debian.org/debian bullseye/main arm64 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get: 104 http://deb.debian.org/debian bullseye/main arm64 python-matplotlib-data all 3.3.4-1 [4153 kB] Get: 105 http://deb.debian.org/debian bullseye/main arm64 python3-all arm64 3.9.2-3 [1056 B] Get: 106 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2+deb11u2 [189 kB] Get: 107 http://deb.debian.org/debian bullseye/main arm64 python3.9-dev arm64 3.9.2-1 [515 kB] Get: 108 http://deb.debian.org/debian bullseye/main arm64 python3-dev arm64 3.9.2-3 [24.8 kB] Get: 109 http://deb.debian.org/debian bullseye/main arm64 python3-all-dev arm64 3.9.2-3 [1064 B] Get: 110 http://deb.debian.org/debian bullseye/main arm64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 111 http://deb.debian.org/debian bullseye/main arm64 python3-numpy arm64 1:1.19.5-1 [3196 kB] Get: 112 http://deb.debian.org/debian bullseye/main arm64 python3-decorator all 4.4.2-2 [15.8 kB] Get: 113 http://deb.debian.org/debian bullseye/main arm64 python3-scipy arm64 1.6.0-2 [11.6 MB] Get: 114 http://deb.debian.org/debian bullseye/main arm64 python3-spglib arm64 1.16.1-1 [99.2 kB] Get: 115 http://deb.debian.org/debian bullseye/main arm64 python3-six all 1.16.0-2 [17.5 kB] Get: 116 http://deb.debian.org/debian bullseye/main arm64 python3-dateutil all 2.8.1-6 [79.2 kB] Get: 117 http://deb.debian.org/debian bullseye/main arm64 python3-pyparsing all 2.4.7-1 [109 kB] Get: 118 http://deb.debian.org/debian bullseye/main arm64 python3-cycler all 0.10.0-3 [8084 B] Get: 119 http://deb.debian.org/debian bullseye/main arm64 python3-kiwisolver arm64 1.3.1-1+b1 [51.6 kB] Get: 120 http://deb.debian.org/debian bullseye/main arm64 python3-pil arm64 8.1.2+dfsg-0.3+deb11u1 [429 kB] Get: 121 http://deb.debian.org/debian bullseye/main arm64 python3-matplotlib arm64 3.3.4-1 [4109 kB] Get: 122 http://deb.debian.org/debian bullseye/main arm64 python3-ase all 3.21.1-2 [1331 kB] Get: 123 http://deb.debian.org/debian bullseye/main arm64 python3-nose all 1.3.7-7 [133 kB] Get: 124 http://deb.debian.org/debian bullseye/main arm64 python3-ptyprocess all 0.7.0-1 [13.6 kB] Get: 125 http://deb.debian.org/debian bullseye/main arm64 python3-pexpect all 4.8.0-2 [54.9 kB] Get: 126 http://deb.debian.org/debian bullseye/main arm64 python3-setuptools all 52.0.0-4 [366 kB] Get: 127 http://deb.debian.org/debian bullseye/main arm64 python3-zmq arm64 20.0.0-1+b1 [250 kB] Fetched 74.8 MB in 1s (96.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17734 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8+deb11u1_arm64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../1-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. 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Setting up libexpat1:arm64 (2.2.10-2+deb11u5) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18601 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.9.2-3_arm64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../02-mailcap_3.69_all.deb ... Unpacking mailcap (3.69) ... Selecting previously unselected package mime-support. Preparing to unpack .../03-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package tzdata. Preparing to unpack .../04-tzdata_2021a-1+deb11u10_all.deb ... Unpacking tzdata (2021a-1+deb11u10) ... Selecting previously unselected package libmpdec3:arm64. Preparing to unpack .../05-libmpdec3_2.5.1-1_arm64.deb ... Unpacking libmpdec3:arm64 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../07-libreadline8_8.1-1_arm64.deb ... Unpacking libreadline8:arm64 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:arm64. Preparing to unpack .../08-libpython3.9-stdlib_3.9.2-1_arm64.deb ... Unpacking libpython3.9-stdlib:arm64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../09-python3.9_3.9.2-1_arm64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../10-libpython3-stdlib_3.9.2-3_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20908 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_arm64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../001-libncurses6_6.2+20201114-2+deb11u2_arm64.deb ... Unpacking libncurses6:arm64 (6.2+20201114-2+deb11u2) ... Selecting previously unselected package libprocps8:arm64. Preparing to unpack .../002-libprocps8_2%3a3.3.17-5_arm64.deb ... Unpacking libprocps8:arm64 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a3.3.17-5_arm64.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../006-libmagic1_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.39-3+deb11u1_arm64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libmd0:arm64. Preparing to unpack .../009-libmd0_1.0.3-3_arm64.deb ... Unpacking libmd0:arm64 (1.0.3-3) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../010-libbsd0_0.11.3-1+deb11u1_arm64.deb ... Unpacking libbsd0:arm64 (0.11.3-1+deb11u1) ... Selecting previously unselected package libedit2:arm64. Preparing to unpack .../011-libedit2_3.1-20191231-2+b1_arm64.deb ... Unpacking libedit2:arm64 (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:arm64. Preparing to unpack .../012-libcbor0_0.5.0+dfsg-2_arm64.deb ... Unpacking libcbor0:arm64 (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:arm64. Preparing to unpack .../013-libfido2-1_1.6.0-2_arm64.deb ... Unpacking libfido2-1:arm64 (1.6.0-2) ... Selecting previously unselected package openssh-client. Preparing to unpack .../014-openssh-client_1%3a8.4p1-5+deb11u2_arm64.deb ... Unpacking openssh-client (1:8.4p1-5+deb11u2) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../016-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../017-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../018-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../019-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../020-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../021-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../022-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../023-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../024-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../025-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../026-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../027-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../028-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../029-libelf1_0.183-1_arm64.deb ... Unpacking libelf1:arm64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../030-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:arm64. Preparing to unpack .../031-libicu67_67.1-7_arm64.deb ... Unpacking libicu67:arm64 (67.1-7) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../032-libxml2_2.9.10+dfsg-6.7+deb11u4_arm64.deb ... Unpacking libxml2:arm64 (2.9.10+dfsg-6.7+deb11u4) ... Selecting previously unselected package gettext. Preparing to unpack .../033-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../034-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../035-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../036-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../037-python3-lib2to3_3.9.2-1_all.deb ... Unpacking python3-lib2to3 (3.9.2-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../038-python3-distutils_3.9.2-1_all.deb ... Unpacking python3-distutils (3.9.2-1) ... Selecting previously unselected package dh-python. Preparing to unpack .../039-dh-python_4.20201102+nmu1_all.deb ... Unpacking dh-python (4.20201102+nmu1) ... Selecting previously unselected package fonts-font-awesome. Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Selecting previously unselected package fonts-glyphicons-halflings. Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-2_all.deb ... Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../042-fonts-lyx_2.3.6-1_all.deb ... Unpacking fonts-lyx (2.3.6-1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../043-libgfortran5_10.2.1-6_arm64.deb ... Unpacking libgfortran5:arm64 (10.2.1-6) ... Selecting previously unselected package libgfortran-10-dev:arm64. Preparing to unpack .../044-libgfortran-10-dev_10.2.1-6_arm64.deb ... Unpacking libgfortran-10-dev:arm64 (10.2.1-6) ... Selecting previously unselected package gfortran-10. Preparing to unpack .../045-gfortran-10_10.2.1-6_arm64.deb ... Unpacking gfortran-10 (10.2.1-6) ... Selecting previously unselected package gfortran. Preparing to unpack .../046-gfortran_4%3a10.2.1-1_arm64.deb ... Unpacking gfortran (4:10.2.1-1) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../047-libblas3_3.9.0-3+deb11u1_arm64.deb ... Unpacking libblas3:arm64 (3.9.0-3+deb11u1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../048-libbrotli1_1.0.9-2+b2_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b2) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../049-libdeflate0_1.7-1_arm64.deb ... Unpacking libdeflate0:arm64 (1.7-1) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../050-libexpat1-dev_2.2.10-2+deb11u5_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.2.10-2+deb11u5) ... Selecting previously unselected package libpng16-16:arm64. Preparing to unpack .../051-libpng16-16_1.6.37-3_arm64.deb ... Unpacking libpng16-16:arm64 (1.6.37-3) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../052-libfreetype6_2.10.4+dfsg-1+deb11u1_arm64.deb ... Unpacking libfreetype6:arm64 (2.10.4+dfsg-1+deb11u1) ... Selecting previously unselected package libimagequant0:arm64. Preparing to unpack .../053-libimagequant0_2.12.2-1.1_arm64.deb ... Unpacking libimagequant0:arm64 (2.12.2-1.1) ... Selecting previously unselected package libjbig0:arm64. Preparing to unpack .../054-libjbig0_2.1-3.1+b2_arm64.deb ... Unpacking libjbig0:arm64 (2.1-3.1+b2) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../055-libjpeg62-turbo_1%3a2.0.6-4_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:2.0.6-4) ... Selecting previously unselected package libjs-bootstrap. 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Setting up runit-helper (2.10.3) ... Setting up libxau6:arm64 (1:1.0.9-1) ... Setting up ttf-bitstream-vera (1.10-8.1) ... Setting up libsodium23:arm64 (1.0.18-1) ... Setting up bsdextrautils (2.36.1-8+deb11u1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3+deb11u1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Setting up libpgm-5.3-0:arm64 (5.3.128~dfsg-2) ... Setting up fonts-lyx (2.3.6-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b2) ... Setting up libcbor0:arm64 (0.5.0+dfsg-2) ... Setting up libnorm1:arm64 (1.5.9+dfsg-2) ... Setting up libmagic1:arm64 (1:5.39-3+deb11u1) ... Setting up libdeflate0:arm64 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3+deb11u1) ... Setting up libjbig0:arm64 (2.1-3.1+b2) ... Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Jan 6 21:55:46 UTC 2024. Universal Time is now: Sat Jan 6 21:55:46 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:arm64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.2.10-2+deb11u5) ... Setting up libjpeg62-turbo:arm64 (1:2.0.6-4) ... Setting up libwrap0:arm64 (7.6.q-31) ... Setting up libncurses6:arm64 (6.2+20201114-2+deb11u2) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up libimagequant0:arm64 (2.12.2-1.1) ... Setting up libpng16-16:arm64 (1.6.37-3) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:arm64 (0.6.1-2.1+deb11u2) ... Setting up libgfortran5:arm64 (10.2.1-6) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2+deb11u2) ... Setting up libmd0:arm64 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libmpdec3:arm64 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgfortran-10-dev:arm64 (10.2.1-6) ... Setting up libtiff5:arm64 (4.2.0-1+deb11u4) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libfido2-1:arm64 (1.6.0-2) ... Setting up python-matplotlib-data (3.3.4-1) ... Setting up libwebpmux3:arm64 (0.6.1-2.1+deb11u2) ... Setting up libbsd0:arm64 (0.11.3-1+deb11u1) ... Setting up mailcap (3.69) ... Setting up libelf1:arm64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7+deb11u4) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up libprocps8:arm64 (2:3.3.17-5) ... Setting up libjs-bootstrap (3.4.1+dfsg-2) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up liblapack3:arm64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libzmq5:arm64 (4.3.4-1) ... Setting up mime-support (3.66) ... Setting up libtool (2.4.6-15) ... Setting up libwebpdemux2:arm64 (0.6.1-2.1+deb11u2) ... Setting up libedit2:arm64 (3.1-20191231-2+b1) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u1) ... Setting up libfreetype6:arm64 (2.10.4+dfsg-1+deb11u1) ... Setting up gfortran-10 (10.2.1-6) ... Setting up ucf (3.0043) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libpython3.9-stdlib:arm64 (3.9.2-1) ... Setting up libpython3-stdlib:arm64 (3.9.2-3) ... Setting up liblbfgsb0:arm64 (3.0+dfsg.3-9) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up openssh-client (1:8.4p1-5+deb11u2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up dh-autoreconf (20) ... Setting up libpython3.9:arm64 (3.9.2-1) ... Setting up python3.9 (3.9.2-1) ... Setting up openssh-sftp-server (1:8.4p1-5+deb11u2) ... Setting up openssh-server (1:8.4p1-5+deb11u2) ... Creating config file /etc/ssh/sshd_config with new version Creating SSH2 RSA key; this may take some time ... 3072 SHA256:Dkup0plBoE9fatorhiN2wGlgBk74jDIl5IVWVdpyJgU root@i-capture-the-hostname (RSA) Creating SSH2 ECDSA key; this may take some time ... 256 SHA256:ueH/zF9GQZFa2InpG3xlwFykNr6y9nbaSnX0set4Z5k root@i-capture-the-hostname (ECDSA) Creating SSH2 ED25519 key; this may take some time ... 256 SHA256:yMASNW4pdbuUUpWIEIkorpYiJHYt3b6lUd5vB18IEvM root@i-capture-the-hostname (ED25519) invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libpython3.9-dev:arm64 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3-six (1.16.0-2) ... Setting up python3-pil:arm64 (8.1.2+dfsg-0.3+deb11u1) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-zmq (20.0.0-1+b1) ... Setting up python3-cycler (0.10.0-3) ... Setting up python3-kiwisolver (1.3.1-1+b1) ... Setting up python3.9-dev (3.9.2-1) ... Setting up python3-dateutil (2.8.1-6) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-ptyprocess (0.7.0-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up libpython3-dev:arm64 (3.9.2-3) ... Setting up python3-setuptools (52.0.0-4) ... Setting up python3-all (3.9.2-3) ... Setting up python3-nose (1.3.7-7) ... Setting up libpython3-all-dev:arm64 (3.9.2-3) ... Setting up python3-pexpect (4.8.0-2) ... Setting up python3-dev (3.9.2-3) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-spglib (1.16.1-1) ... Setting up python3-all-dev (3.9.2-3) ... Setting up python3-matplotlib (3.3.4-1) ... Setting up python3-scipy (1.6.0-2) ... Setting up python3-ase (3.21.1-2) ... Processing triggers for libc-bin (2.31-13+deb11u6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bullseye I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/amp-0.6.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../amp_0.6.1-1_source.changes dpkg-buildpackage: info: source package amp dpkg-buildpackage: info: source version 0.6.1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Mattia Rizzolo dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/amp-0.6.1' dh_auto_clean I: pybuild base:232: python3.9 setup.py clean /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) running clean removing '/build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts.linux-arm64-3.9' does not exist -- can't clean it rm -rf amp.egg-info/ find . -name "*.json" -delete find . -name "*-train-log.txt" -delete find . -name "*.pyc" -delete find . -name "*.o" -delete find . -name "*.mod" -delete find . -name "*.so" -delete make[1]: Leaving directory '/build/reproducible-path/amp-0.6.1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules build dh build --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) running config dh_auto_build -O--buildsystem=pybuild I: pybuild pybuild:284: make -C amp python3.9 make[1]: Entering directory '/build/reproducible-path/amp-0.6.1/amp' Building for python3.9 (3.9) make -C model make[2]: Entering directory '/build/reproducible-path/amp-0.6.1/amp/model' gfortran -c neuralnetwork.f90 cp neuralnetwork.mod .. make[2]: Leaving directory '/build/reproducible-path/amp-0.6.1/amp/model' make -C descriptor make[2]: Entering directory '/build/reproducible-path/amp-0.6.1/amp/descriptor' gfortran -c cutoffs.f90 cp cutoffs.mod .. make[2]: Leaving directory '/build/reproducible-path/amp-0.6.1/amp/descriptor' f2py3.9 -c -m fmodules model.f90 descriptor/cutoffs.f90 descriptor/gaussian.f90 descriptor/zernike.f90 model/neuralnetwork.f90 running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "fmodules" sources f2py options: [] f2py:> /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c creating /tmp/tmpx6h5kxfp/src.linux-arm64-3.9 rmbadname1: Replacing "index" with "index_bn". Reading fortran codes... Reading file 'model.f90' (format:fix) Line #99 in model.f90:" type:: image_forces " analyzeline: No name/args pattern found for line. Line #104 in model.f90:" type:: integer_one_d_array " analyzeline: No name/args pattern found for line. Line #109 in model.f90:" type:: embedded_real_one_one_d_array " analyzeline: No name/args pattern found for line. Line #114 in model.f90:" type:: embedded_real_one_two_d_array " analyzeline: No name/args pattern found for line. Line #119 in model.f90:" type:: embedded_integer_one_one_d_array " analyzeline: No name/args pattern found for line. Line #124 in model.f90:" type:: embedded_one_one_two_d_array " analyzeline: No name/args pattern found for line. Reading file 'descriptor/cutoffs.f90' (format:fix) Reading file 'descriptor/gaussian.f90' (format:free) Reading file 'descriptor/zernike.f90' (format:free) Reading file 'model/neuralnetwork.f90' (format:fix) Line #17 in model/neuralnetwork.f90:" type:: real_two_d_array " analyzeline: No name/args pattern found for line. Line #22 in model/neuralnetwork.f90:" type:: element_parameters " analyzeline: No name/args pattern found for line. Line #29 in model/neuralnetwork.f90:" type:: real_one_d_array " analyzeline: No name/args pattern found for line. Post-processing... Block: fmodules Block: check_version Block: fingerprint_props Block: model_props Block: images_props {} In: :fmodules:model.f90:calculate_loss:calculate_energy vars2fortran: No typespec for argument "image_no". {} In: :fmodules:model.f90:calculate_loss:calculate_forces vars2fortran: No typespec for argument "image_no". {} In: :fmodules:model.f90:calculate_loss:calculate_denergy_dparameters vars2fortran: No typespec for argument "image_no". {} In: :fmodules:model.f90:calculate_loss:calculate_numerical_denergy_dparameters vars2fortran: No typespec for argument "image_no". {} In: :fmodules:model.f90:calculate_loss:calculate_dforces_dparameters vars2fortran: No typespec for argument "image_no". {} In: :fmodules:model.f90:calculate_loss:calculate_numerical_dforces_dparameters vars2fortran: No typespec for argument "image_no". Block: calculate_loss In: :fmodules:model.f90:calculate_loss get_useparameters: no module neuralnetwork info used by calculate_loss Block: unknown_type In: :fmodules:model.f90:calculate_loss:unknown_type get_useparameters: no module neuralnetwork info used by unknown_type Block: unknown_type In: :fmodules:model.f90:calculate_loss:unknown_type get_useparameters: no module neuralnetwork info used by unknown_type Block: unknown_type In: :fmodules:model.f90:calculate_loss:unknown_type get_useparameters: no module neuralnetwork info used by unknown_type Block: unknown_type In: :fmodules:model.f90:calculate_loss:unknown_type get_useparameters: no module neuralnetwork info used by unknown_type Block: unknown_type In: :fmodules:model.f90:calculate_loss:unknown_type get_useparameters: no module neuralnetwork info used by unknown_type Block: unknown_type In: :fmodules:model.f90:calculate_loss:unknown_type get_useparameters: no module neuralnetwork info used by unknown_type Block: deallocate_variables In: :fmodules:model.f90:deallocate_variables get_useparameters: no module neuralnetwork info used by deallocate_variables Block: cutoffs Block: cutoff_fxn Block: cutoff_fxn_prime Block: calculate_g2 Block: calculate_g4 Block: calculate_g2_prime Block: calculate_g4_prime Block: calculate_zernike_prime Block: calculate_z Block: calculate_z_prime Block: calculate_q Block: binomial Block: neuralnetwork Block: unknown_type Block: unknown_type Block: unknown_type Block: calculate_image_energy Block: calculate_atomic_energy Block: calculate_force_ Block: calculate_force Block: calculate_denergy_dparameters_ Block: calculate_datomicenergy_dparameters Block: calculate_dforce_dparameters_ Block: calculate_dforce_dparameters Post-processing (stage 2)... Block: fmodules Block: unknown_interface Block: check_version Block: fingerprint_props Block: model_props Block: images_props Block: calculate_loss Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: deallocate_variables Block: cutoffs Block: cutoff_fxn Block: cutoff_fxn_prime Block: calculate_g2 Block: calculate_g4 Block: calculate_g2_prime Block: calculate_g4_prime Block: calculate_zernike_prime Block: calculate_z Block: calculate_z_prime Block: calculate_q Block: binomial Block: neuralnetwork Block: unknown_type Block: unknown_type Block: unknown_type Block: calculate_image_energy Block: calculate_atomic_energy Block: calculate_force_ Block: calculate_force Block: calculate_denergy_dparameters_ Block: calculate_datomicenergy_dparameters Block: calculate_dforce_dparameters_ Block: calculate_dforce_dparameters Building modules... Building module "fmodules"... Constructing wrapper function "check_version"... warning = check_version(version) Constructing wrapper function "calculate_loss"... loss,dloss_dparameters,energyloss,forceloss,energy_maxresid,force_maxresid = calculate_loss(parameters,lossprime,[num_parameters]) Constructing wrapper function "deallocate_variables"... deallocate_variables() Constructing wrapper function "calculate_g2"... ridge = calculate_g2(neighbornumbers,neighborpositions,g_number,g_eta,rc,cutofffn,ri,[p_gamma]) Constructing wrapper function "calculate_g4"... ridge = calculate_g4(neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn,ri,[p_gamma]) Constructing wrapper function "calculate_g2_prime"... ridge = calculate_g2_prime(neighborindices,neighbornumbers,neighborpositions,g_number,g_eta,rc,cutofffn,i,ri,m,l,[p_gamma]) Constructing wrapper function "calculate_g4_prime"... ridge = calculate_g4_prime(neighborindices,neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn,i,ri,m,l,[p_gamma]) Constructing wrapper function "calculate_zernike_prime"... norm_prime = calculate_zernike_prime(n,l,n_indices,numbers,rs,g_numbers,cutoff,indexx,home,p,q,factorial,cutofffn,[n_length,fac_length,p_gamma]) Constructing wrapper function "calculate_z"... output = calculate_z(n,l,m,x,y,z,factorial,[length]) Constructing wrapper function "calculate_z_prime"... output = calculate_z_prime(n,l,m,x,y,z,p,factorial,[length]) Constructing wrapper function "calculate_q"... output = calculate_q(nu,k,l,factorial,[length]) Constructing wrapper function "binomial"... output = binomial(n,k,factorial,[length]) Constructing F90 module support for "fingerprint_props"... Variables: num_fingerprints_of_elements raveled_fingerprints raveled_fingerprintprimes getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Constructing F90 module support for "model_props"... Variables: mode_signal train_forces energy_coefficient force_coefficient overfit numericprime d Constructing F90 module support for "images_props"... Variables: num_images num_elements elements_numbers num_images_atoms atomic_numbers num_neighbors raveled_neighborlists actual_energies actual_forces num_atoms atomic_positions getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Constructing F90 module support for "cutoffs"... Creating wrapper for Fortran function "cutoff_fxn"("cutoff_fxn")... Constructing wrapper function "cutoffs.cutoff_fxn"... cutoff_fxn = cutoff_fxn(r,rc,cutofffn,[p_gamma]) Creating wrapper for Fortran function "cutoff_fxn_prime"("cutoff_fxn_prime")... Constructing wrapper function "cutoffs.cutoff_fxn_prime"... cutoff_fxn_prime = cutoff_fxn_prime(r,rc,cutofffn,[p_gamma]) Constructing F90 module support for "neuralnetwork"... Variables: min_fingerprints max_fingerprints no_layers_of_elements no_nodes_of_elements activation_signal getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Skipping type unknown_type Skipping type unknown_type Skipping type unknown_type Creating wrapper for Fortran function "calculate_image_energy"("calculate_image_energy")... Constructing wrapper function "neuralnetwork.calculate_image_energy"... calculate_image_energy = calculate_image_energy(inputs,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_atomic_energy"("calculate_atomic_energy")... Constructing wrapper function "neuralnetwork.calculate_atomic_energy"... calculate_atomic_energy = calculate_atomic_energy(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Creating wrapper for Fortran function "calculate_force_"("calculate_force_")... Constructing wrapper function "neuralnetwork.calculate_force_"... calculate_force_ = calculate_force_(inputs,inputs_,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_force"("calculate_force")... Constructing wrapper function "neuralnetwork.calculate_force"... calculate_force = calculate_force(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Creating wrapper for Fortran function "calculate_denergy_dparameters_"("calculate_denergy_dparameters_")... Constructing wrapper function "neuralnetwork.calculate_denergy_dparameters_"... calculate_denergy_dparameters_ = calculate_denergy_dparameters_(inputs,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_datomicenergy_dparameters"("calculate_datomicenergy_dparameters")... Constructing wrapper function "neuralnetwork.calculate_datomicenergy_dparameters"... calculate_datomicenergy_dparameters = calculate_datomicenergy_dparameters(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Creating wrapper for Fortran function "calculate_dforce_dparameters_"("calculate_dforce_dparameters_")... Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters_"... calculate_dforce_dparameters_ = calculate_dforce_dparameters_(inputs,inputs_,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_dforce_dparameters"("calculate_dforce_dparameters")... Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters"... calculate_dforce_dparameters = calculate_dforce_dparameters(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Wrote C/API module "fmodules" to file "/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c" Fortran 90 wrappers are saved to "/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90" adding '/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fortranobject.c' to sources. adding '/tmp/tmpx6h5kxfp/src.linux-arm64-3.9' to include_dirs. copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.c -> /tmp/tmpx6h5kxfp/src.linux-arm64-3.9 copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.h -> /tmp/tmpx6h5kxfp/src.linux-arm64-3.9 adding '/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90' to sources. build_src: building npy-pkg config files running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']' customize Gnu95FCompiler Found executable /usr/bin/gfortran customize Gnu95FCompiler customize Gnu95FCompiler using build_ext building 'fmodules' extension compiling C sources C compiler: aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-PN012d/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating /tmp/tmpx6h5kxfp/tmp creating /tmp/tmpx6h5kxfp/tmp/tmpx6h5kxfp creating /tmp/tmpx6h5kxfp/tmp/tmpx6h5kxfp/src.linux-arm64-3.9 compile options: '-I/tmp/tmpx6h5kxfp/src.linux-arm64-3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' aarch64-linux-gnu-gcc: /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c aarch64-linux-gnu-gcc: /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fortranobject.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fortranobject.h:13, from /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:16: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c: In function 'f2py_setup_fingerprint_props': /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:3998:45: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 3998 | f2py_fingerprint_props_def[i_f2py++].func = num_fingerprints_of_elements; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:3999:45: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 3999 | f2py_fingerprint_props_def[i_f2py++].func = raveled_fingerprints; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4000:45: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4000 | f2py_fingerprint_props_def[i_f2py++].func = raveled_fingerprintprimes; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c: In function 'f2py_setup_images_props': /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4054:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4054 | f2py_images_props_def[i_f2py++].func = elements_numbers; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4055:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4055 | f2py_images_props_def[i_f2py++].func = num_images_atoms; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4056:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4056 | f2py_images_props_def[i_f2py++].func = atomic_numbers; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4057:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4057 | f2py_images_props_def[i_f2py++].func = num_neighbors; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4058:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4058 | f2py_images_props_def[i_f2py++].func = raveled_neighborlists; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4059:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4059 | f2py_images_props_def[i_f2py++].func = actual_energies; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4060:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4060 | f2py_images_props_def[i_f2py++].func = actual_forces; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4062:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4062 | f2py_images_props_def[i_f2py++].func = atomic_positions; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c: In function 'f2py_setup_neuralnetwork': /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4106:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4106 | f2py_neuralnetwork_def[i_f2py++].func = min_fingerprints; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4107:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4107 | f2py_neuralnetwork_def[i_f2py++].func = max_fingerprints; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4108:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4108 | f2py_neuralnetwork_def[i_f2py++].func = no_layers_of_elements; | ^ /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:4109:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4109 | f2py_neuralnetwork_def[i_f2py++].func = no_nodes_of_elements; | ^ At top level: /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.c:144:12: warning: 'f2py_size' defined but not used [-Wunused-function] 144 | static int f2py_size(PyArrayObject* var, ...) | ^~~~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fortranobject.h:13, from /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fortranobject.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ compiling Fortran 90 module sources Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops creating /tmp/tmpx6h5kxfp/descriptor creating /tmp/tmpx6h5kxfp/model compile options: '-I/tmp/tmpx6h5kxfp/src.linux-arm64-3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' extra options: '-J/tmp/tmpx6h5kxfp/ -I/tmp/tmpx6h5kxfp/' gfortran:f90: model.f90 model.f90:219:2: 219 | do j = 1, num_parameters | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:220:2: 220 | denergy_dparameters(j) = 0.0d0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:221:2: 221 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:269:2: 269 | do selfindex = 1, num_atoms | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:270:2: 270 | allocate(dforces_dparameters(& | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:271:2: 271 | selfindex)%twodarray(3, num_parameters)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:272:2: 272 | do i = 1, 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:273:2: 273 | do j = 1, num_parameters | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:274:2: 274 | dforces_dparameters(& | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:275:2: 275 | selfindex)%twodarray(i, j) = 0.0d0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:276:2: 276 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:277:2: 277 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:278:2: 278 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:300:2: 300 | do p = 1, size(dforces_dparameters) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:301:2: 301 | deallocate(dforces_dparameters(p)%twodarray) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:302:2: 302 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:303:2: 303 | deallocate(dforces_dparameters) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:323:2: 323 | doverfitloss_dparameters(j) = & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:646:2: 646 | allocate(fplus(num_atoms, 3)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:647:2: 647 | do selfindex = 1, num_atoms | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:648:2: 648 | do i = 1, 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:649:2: 649 | fplus(selfindex, i) = amp_forces(selfindex, i) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:650:2: 650 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:651:2: 651 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:655:2: 655 | allocate(fminus(num_atoms, 3)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:656:2: 656 | do selfindex = 1, num_atoms | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:657:2: 657 | do i = 1, 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:658:2: 658 | fminus(selfindex, i) = amp_forces(selfindex, i) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:659:2: 659 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model.f90:660:2: 660 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] gfortran:f90: descriptor/cutoffs.f90 gfortran:f90: model/neuralnetwork.f90 model/neuralnetwork.f90:1379:2: 1379 | unraveled_dforce_dweights(layer)%twodarray(p, q) = & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model/neuralnetwork.f90:1380:2: 1380 | -1.0d0 * unraveled_dforce_dweights(layer)%twodarray(p, q) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model/neuralnetwork.f90:1767:2: 1767 | unraveled_dforce_dparameters(element)%slope = & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model/neuralnetwork.f90:1768:2: 1768 | -1.0d0 * unraveled_dforce_dparameters(element)%slope | 1 Warning: Nonconforming tab character at (1) [-Wtabs] model/neuralnetwork.f90:1802:2: 1802 | unraveled_dforce_dparameters(element)%weights(& | 1 Warning: Nonconforming tab character at (1) [-Wtabs] compiling Fortran sources Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops compile options: '-I/tmp/tmpx6h5kxfp/src.linux-arm64-3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' extra options: '-J/tmp/tmpx6h5kxfp/ -I/tmp/tmpx6h5kxfp/' gfortran:f90: descriptor/gaussian.f90 gfortran:f90: descriptor/zernike.f90 gfortran:f90: /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90 /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:102:10: 102 | use fingerprint_props, only : num_fingerprints_of_elements | 1 Warning: Unused module variable 'num_fingerprints_of_elements' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:102:10: 102 | use fingerprint_props, only : num_fingerprints_of_elements | 1 Warning: Unused module variable 'raveled_fingerprintprimes' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:102:10: 102 | use fingerprint_props, only : num_fingerprints_of_elements | 1 Warning: Unused module variable 'raveled_fingerprints' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'actual_energies' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'actual_forces' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'atomic_numbers' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'atomic_positions' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'elements_numbers' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'num_images_atoms' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'num_neighbors' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:379:10: 379 | use images_props, only : num_images | 1 Warning: Unused module variable 'raveled_neighborlists' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:706:10: 706 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'max_fingerprints' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:706:10: 706 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'min_fingerprints' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:706:10: 706 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'no_layers_of_elements' which has been explicitly imported at (1) [-Wunused-variable] /tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.f90:706:10: 706 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'no_nodes_of_elements' which has been explicitly imported at (1) [-Wunused-variable] /usr/bin/gfortran -Wall -g -Wall -g -shared -Wl,-z,relro -Wl,-z,now -shared /tmp/tmpx6h5kxfp/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodulesmodule.o /tmp/tmpx6h5kxfp/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fortranobject.o /tmp/tmpx6h5kxfp/model.o /tmp/tmpx6h5kxfp/descriptor/cutoffs.o /tmp/tmpx6h5kxfp/model/neuralnetwork.o /tmp/tmpx6h5kxfp/descriptor/gaussian.o /tmp/tmpx6h5kxfp/descriptor/zernike.o /tmp/tmpx6h5kxfp/tmp/tmpx6h5kxfp/src.linux-arm64-3.9/fmodules-f2pywrappers2.o -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10 -lgfortran -o ./fmodules.cpython-39-aarch64-linux-gnu.so Removing build directory /tmp/tmpx6h5kxfp make[1]: Leaving directory '/build/reproducible-path/amp-0.6.1/amp' I: pybuild base:232: /usr/bin/python3 setup.py build /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "amp.fmodules" sources f2py options: [] f2py:> build/src.linux-arm64-3.9/amp/fmodulesmodule.c creating build creating build/src.linux-arm64-3.9 creating build/src.linux-arm64-3.9/amp rmbadname1: Replacing "index" with "index_bn". Reading fortran codes... Reading file 'amp/model/neuralnetwork.f90' (format:fix) Line #17 in amp/model/neuralnetwork.f90:" type:: real_two_d_array " analyzeline: No name/args pattern found for line. Line #22 in amp/model/neuralnetwork.f90:" type:: element_parameters " analyzeline: No name/args pattern found for line. Line #29 in amp/model/neuralnetwork.f90:" type:: real_one_d_array " analyzeline: No name/args pattern found for line. Reading file 'amp/descriptor/gaussian.f90' (format:free) Reading file 'amp/descriptor/cutoffs.f90' (format:fix) Reading file 'amp/descriptor/zernike.f90' (format:free) Reading file 'amp/model.f90' (format:fix) Line #99 in amp/model.f90:" type:: image_forces " analyzeline: No name/args pattern found for line. Line #104 in amp/model.f90:" type:: integer_one_d_array " analyzeline: No name/args pattern found for line. Line #109 in amp/model.f90:" type:: embedded_real_one_one_d_array " analyzeline: No name/args pattern found for line. Line #114 in amp/model.f90:" type:: embedded_real_one_two_d_array " analyzeline: No name/args pattern found for line. Line #119 in amp/model.f90:" type:: embedded_integer_one_one_d_array " analyzeline: No name/args pattern found for line. Line #124 in amp/model.f90:" type:: embedded_one_one_two_d_array " analyzeline: No name/args pattern found for line. Post-processing... Block: fmodules Block: neuralnetwork Block: unknown_type Block: unknown_type Block: unknown_type Block: calculate_image_energy Block: calculate_atomic_energy Block: calculate_force_ Block: calculate_force Block: calculate_denergy_dparameters_ Block: calculate_datomicenergy_dparameters Block: calculate_dforce_dparameters_ Block: calculate_dforce_dparameters Block: calculate_g2 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g2 get_useparameters: no module cutoffs info used by calculate_g2 Block: calculate_g4 In: :fmodules:amp/descriptor/gaussian.f90:calculate_g4 get_useparameters: no module cutoffs info used by calculate_g4 Block: calculate_g2_prime In: :fmodules:amp/descriptor/gaussian.f90:calculate_g2_prime get_useparameters: no module cutoffs info used by calculate_g2_prime Block: calculate_g4_prime In: :fmodules:amp/descriptor/gaussian.f90:calculate_g4_prime get_useparameters: no module cutoffs info used by calculate_g4_prime Block: cutoffs Block: cutoff_fxn Block: cutoff_fxn_prime Block: calculate_zernike_prime Block: calculate_z Block: calculate_z_prime Block: calculate_q Block: binomial Block: check_version Block: fingerprint_props Block: model_props Block: images_props {} In: :fmodules:amp/model.f90:calculate_loss:calculate_energy vars2fortran: No typespec for argument "image_no". {} In: :fmodules:amp/model.f90:calculate_loss:calculate_forces vars2fortran: No typespec for argument "image_no". {} In: :fmodules:amp/model.f90:calculate_loss:calculate_denergy_dparameters vars2fortran: No typespec for argument "image_no". {} In: :fmodules:amp/model.f90:calculate_loss:calculate_numerical_denergy_dparameters vars2fortran: No typespec for argument "image_no". {} In: :fmodules:amp/model.f90:calculate_loss:calculate_dforces_dparameters vars2fortran: No typespec for argument "image_no". {} In: :fmodules:amp/model.f90:calculate_loss:calculate_numerical_dforces_dparameters vars2fortran: No typespec for argument "image_no". Block: calculate_loss Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: deallocate_variables Post-processing (stage 2)... Block: fmodules Block: unknown_interface Block: neuralnetwork Block: unknown_type Block: unknown_type Block: unknown_type Block: calculate_image_energy Block: calculate_atomic_energy Block: calculate_force_ Block: calculate_force Block: calculate_denergy_dparameters_ Block: calculate_datomicenergy_dparameters Block: calculate_dforce_dparameters_ Block: calculate_dforce_dparameters Block: calculate_g2 Block: calculate_g4 Block: calculate_g2_prime Block: calculate_g4_prime Block: cutoffs Block: cutoff_fxn Block: cutoff_fxn_prime Block: calculate_zernike_prime Block: calculate_z Block: calculate_z_prime Block: calculate_q Block: binomial Block: check_version Block: fingerprint_props Block: model_props Block: images_props Block: calculate_loss Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: unknown_type Block: deallocate_variables Building modules... Building module "fmodules"... Constructing wrapper function "calculate_g2"... ridge = calculate_g2(neighbornumbers,neighborpositions,g_number,g_eta,rc,cutofffn,ri,[p_gamma]) Constructing wrapper function "calculate_g4"... ridge = calculate_g4(neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn,ri,[p_gamma]) Constructing wrapper function "calculate_g2_prime"... ridge = calculate_g2_prime(neighborindices,neighbornumbers,neighborpositions,g_number,g_eta,rc,cutofffn,i,ri,m,l,[p_gamma]) Constructing wrapper function "calculate_g4_prime"... ridge = calculate_g4_prime(neighborindices,neighbornumbers,neighborpositions,g_numbers,g_gamma,g_zeta,g_eta,rc,cutofffn,i,ri,m,l,[p_gamma]) Constructing wrapper function "calculate_zernike_prime"... norm_prime = calculate_zernike_prime(n,l,n_indices,numbers,rs,g_numbers,cutoff,indexx,home,p,q,factorial,cutofffn,[n_length,fac_length,p_gamma]) Constructing wrapper function "calculate_z"... output = calculate_z(n,l,m,x,y,z,factorial,[length]) Constructing wrapper function "calculate_z_prime"... output = calculate_z_prime(n,l,m,x,y,z,p,factorial,[length]) Constructing wrapper function "calculate_q"... output = calculate_q(nu,k,l,factorial,[length]) Constructing wrapper function "binomial"... output = binomial(n,k,factorial,[length]) Constructing wrapper function "check_version"... warning = check_version(version) Constructing wrapper function "calculate_loss"... loss,dloss_dparameters,energyloss,forceloss,energy_maxresid,force_maxresid = calculate_loss(parameters,lossprime,[num_parameters]) Constructing wrapper function "deallocate_variables"... deallocate_variables() Constructing F90 module support for "neuralnetwork"... Variables: min_fingerprints max_fingerprints no_layers_of_elements no_nodes_of_elements activation_signal getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Skipping type unknown_type Skipping type unknown_type Skipping type unknown_type Creating wrapper for Fortran function "calculate_image_energy"("calculate_image_energy")... Constructing wrapper function "neuralnetwork.calculate_image_energy"... calculate_image_energy = calculate_image_energy(inputs,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_atomic_energy"("calculate_atomic_energy")... Constructing wrapper function "neuralnetwork.calculate_atomic_energy"... calculate_atomic_energy = calculate_atomic_energy(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Creating wrapper for Fortran function "calculate_force_"("calculate_force_")... Constructing wrapper function "neuralnetwork.calculate_force_"... calculate_force_ = calculate_force_(inputs,inputs_,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_force"("calculate_force")... Constructing wrapper function "neuralnetwork.calculate_force"... calculate_force = calculate_force(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Creating wrapper for Fortran function "calculate_denergy_dparameters_"("calculate_denergy_dparameters_")... Constructing wrapper function "neuralnetwork.calculate_denergy_dparameters_"... calculate_denergy_dparameters_ = calculate_denergy_dparameters_(inputs,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_datomicenergy_dparameters"("calculate_datomicenergy_dparameters")... Constructing wrapper function "neuralnetwork.calculate_datomicenergy_dparameters"... calculate_datomicenergy_dparameters = calculate_datomicenergy_dparameters(symbol,fingerprint,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Creating wrapper for Fortran function "calculate_dforce_dparameters_"("calculate_dforce_dparameters_")... Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters_"... calculate_dforce_dparameters_ = calculate_dforce_dparameters_(inputs,inputs_,parameters,[num_inputs,num_parameters]) Creating wrapper for Fortran function "calculate_dforce_dparameters"("calculate_dforce_dparameters")... Constructing wrapper function "neuralnetwork.calculate_dforce_dparameters"... calculate_dforce_dparameters = calculate_dforce_dparameters(symbol,fingerprint,fingerprintprime,elements_numbers,parameters,[len_of_fingerprint,num_elements,num_parameters]) Constructing F90 module support for "cutoffs"... Creating wrapper for Fortran function "cutoff_fxn"("cutoff_fxn")... Constructing wrapper function "cutoffs.cutoff_fxn"... cutoff_fxn = cutoff_fxn(r,rc,cutofffn,[p_gamma]) Creating wrapper for Fortran function "cutoff_fxn_prime"("cutoff_fxn_prime")... Constructing wrapper function "cutoffs.cutoff_fxn_prime"... cutoff_fxn_prime = cutoff_fxn_prime(r,rc,cutofffn,[p_gamma]) Constructing F90 module support for "fingerprint_props"... Variables: num_fingerprints_of_elements raveled_fingerprints raveled_fingerprintprimes getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Constructing F90 module support for "model_props"... Variables: mode_signal train_forces energy_coefficient force_coefficient overfit numericprime d Constructing F90 module support for "images_props"... Variables: num_images num_elements elements_numbers num_images_atoms atomic_numbers num_neighbors raveled_neighborlists actual_energies actual_forces num_atoms atomic_positions getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' getarrdims:warning: assumed shape array, using 0 instead of ':' Wrote C/API module "fmodules" to file "build/src.linux-arm64-3.9/amp/fmodulesmodule.c" Fortran 90 wrappers are saved to "build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90" adding 'build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.c' to sources. adding 'build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp' to include_dirs. creating build/src.linux-arm64-3.9/build creating build/src.linux-arm64-3.9/build/src.linux-arm64-3.9 creating build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp adding 'build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90' to sources. build_src: building npy-pkg config files running build_py creating /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp copying amp/utilities.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp copying amp/analysis.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp copying amp/__init__.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp creating /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/zernike.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/gaussian.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/example.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/cutoffs.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/bispectrum.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/analysis.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor copying amp/descriptor/__init__.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor creating /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/regression copying amp/regression/__init__.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/regression creating /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model copying amp/model/tflow.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model copying amp/model/neuralnetwork.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model copying amp/model/__main__.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model copying amp/model/__init__.py -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model copying amp/VERSION -> /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']' customize Gnu95FCompiler Found executable /usr/bin/gfortran customize Gnu95FCompiler customize Gnu95FCompiler using build_ext building 'amp.fmodules' extension compiling C sources C compiler: aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-PN012d/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build/temp.linux-arm64-3.9/build creating build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9 creating build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/amp creating build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/build creating build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/build/src.linux-arm64-3.9 creating build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp compile options: '-Ibuild/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' aarch64-linux-gnu-gcc: build/src.linux-arm64-3.9/amp/fmodulesmodule.c aarch64-linux-gnu-gcc: build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.h:13, from build/src.linux-arm64-3.9/amp/fmodulesmodule.c:16: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.h:13, from build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ build/src.linux-arm64-3.9/amp/fmodulesmodule.c: In function 'f2py_setup_neuralnetwork': build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4008:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4008 | f2py_neuralnetwork_def[i_f2py++].func = min_fingerprints; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4009:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4009 | f2py_neuralnetwork_def[i_f2py++].func = max_fingerprints; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4010:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4010 | f2py_neuralnetwork_def[i_f2py++].func = no_layers_of_elements; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4011:41: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4011 | f2py_neuralnetwork_def[i_f2py++].func = no_nodes_of_elements; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c: In function 'f2py_setup_fingerprint_props': build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4054:45: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4054 | f2py_fingerprint_props_def[i_f2py++].func = num_fingerprints_of_elements; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4055:45: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4055 | f2py_fingerprint_props_def[i_f2py++].func = raveled_fingerprints; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4056:45: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4056 | f2py_fingerprint_props_def[i_f2py++].func = raveled_fingerprintprimes; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c: In function 'f2py_setup_images_props': build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4110:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4110 | f2py_images_props_def[i_f2py++].func = elements_numbers; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4111:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4111 | f2py_images_props_def[i_f2py++].func = num_images_atoms; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4112:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4112 | f2py_images_props_def[i_f2py++].func = atomic_numbers; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4113:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4113 | f2py_images_props_def[i_f2py++].func = num_neighbors; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4114:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4114 | f2py_images_props_def[i_f2py++].func = raveled_neighborlists; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4115:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4115 | f2py_images_props_def[i_f2py++].func = actual_energies; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4116:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4116 | f2py_images_props_def[i_f2py++].func = actual_forces; | ^ build/src.linux-arm64-3.9/amp/fmodulesmodule.c:4118:40: warning: assignment to 'f2py_init_func' {aka 'void (*)(int *, long int *, void (*)(char *, long int *), int *)'} from incompatible pointer type 'void (*)(int *, int *, void (*)(char *, int *), int *)' [-Wincompatible-pointer-types] 4118 | f2py_images_props_def[i_f2py++].func = atomic_positions; | ^ At top level: build/src.linux-arm64-3.9/amp/fmodulesmodule.c:144:12: warning: 'f2py_size' defined but not used [-Wunused-function] 144 | static int f2py_size(PyArrayObject* var, ...) | ^~~~~~~~~ compiling Fortran 90 module sources creating build/temp.linux-arm64-3.9/amp Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops creating build/temp.linux-arm64-3.9/amp/model creating build/temp.linux-arm64-3.9/amp/descriptor compile options: '-Ibuild/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' extra options: '-Jbuild/temp.linux-arm64-3.9/amp -Ibuild/temp.linux-arm64-3.9/amp' gfortran:f90: amp/model/neuralnetwork.f90 amp/model/neuralnetwork.f90:1379:2: 1379 | unraveled_dforce_dweights(layer)%twodarray(p, q) = & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model/neuralnetwork.f90:1380:2: 1380 | -1.0d0 * unraveled_dforce_dweights(layer)%twodarray(p, q) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model/neuralnetwork.f90:1767:2: 1767 | unraveled_dforce_dparameters(element)%slope = & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model/neuralnetwork.f90:1768:2: 1768 | -1.0d0 * unraveled_dforce_dparameters(element)%slope | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model/neuralnetwork.f90:1802:2: 1802 | unraveled_dforce_dparameters(element)%weights(& | 1 Warning: Nonconforming tab character at (1) [-Wtabs] gfortran:f90: amp/descriptor/cutoffs.f90 gfortran:f90: amp/model.f90 amp/model.f90:219:2: 219 | do j = 1, num_parameters | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:220:2: 220 | denergy_dparameters(j) = 0.0d0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:221:2: 221 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:269:2: 269 | do selfindex = 1, num_atoms | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:270:2: 270 | allocate(dforces_dparameters(& | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:271:2: 271 | selfindex)%twodarray(3, num_parameters)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:272:2: 272 | do i = 1, 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:273:2: 273 | do j = 1, num_parameters | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:274:2: 274 | dforces_dparameters(& | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:275:2: 275 | selfindex)%twodarray(i, j) = 0.0d0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:276:2: 276 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:277:2: 277 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:278:2: 278 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:300:2: 300 | do p = 1, size(dforces_dparameters) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:301:2: 301 | deallocate(dforces_dparameters(p)%twodarray) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:302:2: 302 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:303:2: 303 | deallocate(dforces_dparameters) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:323:2: 323 | doverfitloss_dparameters(j) = & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:646:2: 646 | allocate(fplus(num_atoms, 3)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:647:2: 647 | do selfindex = 1, num_atoms | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:648:2: 648 | do i = 1, 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:649:2: 649 | fplus(selfindex, i) = amp_forces(selfindex, i) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:650:2: 650 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:651:2: 651 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:655:2: 655 | allocate(fminus(num_atoms, 3)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:656:2: 656 | do selfindex = 1, num_atoms | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:657:2: 657 | do i = 1, 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:658:2: 658 | fminus(selfindex, i) = amp_forces(selfindex, i) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:659:2: 659 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] amp/model.f90:660:2: 660 | end do | 1 Warning: Nonconforming tab character at (1) [-Wtabs] compiling Fortran sources Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/amp-0.6.1=. -fstack-protector-strong -fPIC -O3 -funroll-loops compile options: '-Ibuild/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c' extra options: '-Jbuild/temp.linux-arm64-3.9/amp -Ibuild/temp.linux-arm64-3.9/amp' gfortran:f90: amp/descriptor/gaussian.f90 gfortran:f90: amp/descriptor/zernike.f90 gfortran:f90: build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90 build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 256 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'max_fingerprints' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 256 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'min_fingerprints' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 256 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'no_layers_of_elements' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:256:10: 256 | use neuralnetwork, only : min_fingerprints | 1 Warning: Unused module variable 'no_nodes_of_elements' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:533:10: 533 | use fingerprint_props, only : num_fingerprints_of_elements | 1 Warning: Unused module variable 'num_fingerprints_of_elements' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:533:10: 533 | use fingerprint_props, only : num_fingerprints_of_elements | 1 Warning: Unused module variable 'raveled_fingerprintprimes' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:533:10: 533 | use fingerprint_props, only : num_fingerprints_of_elements | 1 Warning: Unused module variable 'raveled_fingerprints' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'actual_energies' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'actual_forces' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'atomic_numbers' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'atomic_positions' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'elements_numbers' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'num_images_atoms' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'num_neighbors' which has been explicitly imported at (1) [-Wunused-variable] build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90:810:10: 810 | use images_props, only : num_images | 1 Warning: Unused module variable 'raveled_neighborlists' which has been explicitly imported at (1) [-Wunused-variable] /usr/bin/gfortran -Wall -g -Wall -g -shared -Wl,-z,relro -Wl,-z,now -shared build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fmodulesmodule.o build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.o build/temp.linux-arm64-3.9/amp/model/neuralnetwork.o build/temp.linux-arm64-3.9/amp/descriptor/cutoffs.o build/temp.linux-arm64-3.9/amp/model.o build/temp.linux-arm64-3.9/amp/descriptor/gaussian.o build/temp.linux-arm64-3.9/amp/descriptor/zernike.o build/temp.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.o -L/usr/lib/gcc/aarch64-linux-gnu/10 -L/usr/lib/gcc/aarch64-linux-gnu/10 -lgfortran -o /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/fmodules.cpython-39-aarch64-linux-gnu.so debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/amp-0.6.1' PYBUILD_SYSTEM=custom \ PYBUILD_TEST_ARGS="cd {build_dir}; {interpreter} /usr/bin/nosetests3 tests" \ dh_auto_test make[1]: Leaving directory '/build/reproducible-path/amp-0.6.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/reproducible-path/amp-0.6.1/debian/python3-amp /usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "amp.fmodules" sources f2py options: [] adding 'build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp/fortranobject.c' to sources. adding 'build/src.linux-arm64-3.9/build/src.linux-arm64-3.9/amp' to include_dirs. adding 'build/src.linux-arm64-3.9/amp/fmodules-f2pywrappers2.f90' to sources. build_src: building npy-pkg config files running build_py running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']' customize Gnu95FCompiler Found executable /usr/bin/gfortran customize Gnu95FCompiler customize Gnu95FCompiler using build_ext running install_lib creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9 creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/fmodules.cpython-39-aarch64-linux-gnu.so -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/VERSION -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model/__init__.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model/__main__.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model/neuralnetwork.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/model/tflow.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/regression copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/regression/__init__.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/regression creating /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/__init__.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/analysis.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/bispectrum.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/cutoffs.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/example.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/gaussian.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/descriptor/zernike.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/__init__.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/analysis.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp copying /build/reproducible-path/amp-0.6.1/.pybuild/cpython3_3.9_amp/build/amp/utilities.py -> /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model/__main__.py to __main__.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model/neuralnetwork.py to neuralnetwork.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/model/tflow.py to tflow.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/regression/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/analysis.py to analysis.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/bispectrum.py to bispectrum.cpython-39.pyc /usr/lib/python3.9/dist-packages/amp/descriptor/bispectrum.py:398: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib/python3.9/dist-packages/amp/descriptor/bispectrum.py:400: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/cutoffs.py to cutoffs.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/example.py to example.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/gaussian.py to gaussian.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/descriptor/zernike.py to zernike.cpython-39.pyc /usr/lib/python3.9/dist-packages/amp/descriptor/zernike.py:569: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib/python3.9/dist-packages/amp/descriptor/zernike.py:571: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/analysis.py to analysis.cpython-39.pyc byte-compiling /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp/utilities.py to utilities.cpython-39.pyc running install_egg_info Writing /build/reproducible-path/amp-0.6.1/debian/python3-amp/usr/lib/python3.9/dist-packages/amp_atomistics-0.6.1.egg-info running install_clib customize UnixCCompiler I: pybuild pybuild:310: cp -r '/build/reproducible-path/amp-0.6.1/tests' '/build/reproducible-path/amp-0.6.1/debian/python3-amp//usr/lib/python3.9/dist-packages/amp' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/amp-0.6.1' dh_python3 W: dh_python3 fs:113: Paths differ: debian/python3-amp/usr/lib/python3.9/dist-packages/amp/fmodules.cpython-39-aarch64-linux-gnu.so and debian/python3-amp/usr/lib/python3/dist-packages/amp/fmodules.cpython-39-aarch64-linux-gnu.so I: dh_python3 tools:114: replacing shebang in debian/python3-amp/usr/bin/amp-plotconvergence I: dh_python3 tools:114: replacing shebang in debian/python3-amp/usr/bin/amp-compress dh_numpy3 dh_fixperms make[1]: Leaving directory '/build/reproducible-path/amp-0.6.1' dh_installinit -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_strip -O--buildsystem=pybuild dh_makeshlibs -O--buildsystem=pybuild dh_shlibdeps -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Breaks field of package python3-amp: substitution variable ${python3:Breaks} used, but is not defined dpkg-gencontrol: warning: package python3-amp: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-amp: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: Breaks field of package python3-amp: substitution variable ${python3:Breaks} used, but is not defined dpkg-gencontrol: warning: package python3-amp: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-amp: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-amp-dbgsym' in '../python3-amp-dbgsym_0.6.1-1_arm64.deb'. dpkg-deb: building package 'python3-amp' in '../python3-amp_0.6.1-1_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../amp_0.6.1-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1770174/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1770174 and its subdirectories I: Current time: Sun Jan 7 11:56:57 +14 2024 I: pbuilder-time-stamp: 1704578217