I: pbuilder: network access will be disabled during build I: Current time: Tue Feb 18 23:07:10 +14 2025 I: pbuilder-time-stamp: 1739869630 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [twopaco_1.0.0+dfsg-1.dsc] I: copying [./twopaco_1.0.0+dfsg.orig.tar.xz] I: copying [./twopaco_1.0.0+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Sep 29 05:53:28 2022 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./twopaco_1.0.0+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting twopaco in twopaco-1.0.0+dfsg dpkg-source: info: unpacking twopaco_1.0.0+dfsg.orig.tar.xz dpkg-source: info: unpacking twopaco_1.0.0+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/10707/tmp/hooks/D01_modify_environment starting debug: Running on ionos16-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Feb 18 09:07 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/10707/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/10707/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=00524aa0e90a4a36b6e441fd7535d0af LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=10707 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iRbgkh38/pbuilderrc_PttJ --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iRbgkh38/b2 --logfile b2/build.log twopaco_1.0.0+dfsg-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 23 2023 bash -rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp -rwxr-xr-x 1 root root 136916 Jan 5 2023 dash -rwxr-xr-x 1 root root 137160 Sep 20 2022 date -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd -rwxr-xr-x 1 root root 108940 Sep 20 2022 df -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir -rwxr-xr-x 1 root root 87760 Mar 23 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 84272 Mar 23 2023 findmnt -rwsr-xr-x 1 root root 30240 Mar 23 2023 fusermount -rwxr-xr-x 1 root root 218680 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 19 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln -rwxr-xr-x 1 root root 55600 Mar 23 2023 login -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls -rwxr-xr-x 1 root root 214568 Mar 23 2023 lsblk -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 23 2023 more -rwsr-xr-x 1 root root 58912 Mar 23 2023 mount -rwxr-xr-x 1 root root 13856 Mar 23 2023 mountpoint -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 22308 Jul 28 2023 run-parts -rwxr-xr-x 1 root root 133224 Jan 5 2023 sed lrwxrwxrwx 1 root root 9 Feb 18 09:07 sh -> /bin/bash -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty -rwsr-xr-x 1 root root 83492 Mar 23 2023 su -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync -rwxr-xr-x 1 root root 598456 Apr 6 2023 tar -rwxr-xr-x 1 root root 13860 Jul 28 2023 tempfile -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch -rwxr-xr-x 1 root root 34664 Sep 20 2022 true -rwxr-xr-x 1 root root 17892 Mar 23 2023 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 23 2023 umount -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 23 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/10707/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libtbb-dev, libtclap-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18156 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libtbb-dev; however: Package libtbb-dev is not installed. pbuilder-satisfydepends-dummy depends on libtclap-dev; however: Package libtclap-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libhwloc15{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtbb-dev{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtclap-dev{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libhwloc-plugins libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 54 newly installed, 0 to remove and 0 not upgraded. Need to get 37.7 MB of archives. After unpacking 141 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 libproc2-0 i386 2:4.0.2-3 [63.7 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 procps i386 2:4.0.2-3 [706 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.3~deb12u1 [720 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libarchive13 i386 3.6.2-1 [385 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1+deb12u1 [80.7 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-10+deb12u4 [424 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libjsoncpp25 i386 1.9.5-4 [86.2 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 librhash0 i386 1.4.3-3 [149 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 libuv1 i386 1.44.2-1 [147 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 cmake i386 3.25.1-1 [9767 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 libhwloc15 i386 2.9.0-1 [168 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libtbbmalloc2 i386 2021.8.0-2 [45.1 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 libtbbbind-2-5 i386 2021.8.0-2 [13.7 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 libtbb12 i386 2021.8.0-2 [81.3 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 libtbb-dev i386 2021.8.0-2 [192 kB] Get: 54 http://deb.debian.org/debian bookworm/main i386 libtclap-dev i386 1.2.5-1+b1 [3360 kB] Fetched 37.7 MB in 1s (49.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18156 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_i386.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../04-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_i386.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../17-libicu72_72.1-3_i386.deb ... Unpacking libicu72:i386 (72.1-3) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.3~deb12u1_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3~deb12u1) ... Selecting previously unselected package libarchive13:i386. Preparing to unpack .../19-libarchive13_3.6.2-1_i386.deb ... Unpacking libarchive13:i386 (3.6.2-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../20-libbrotli1_1.0.9-2+b6_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../21-libsasl2-modules-db_2.1.28+dfsg-10_i386.deb ... 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Setting up autotools-dev (20220109.1) ... Setting up libuv1:i386 (1.44.2-1) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libproc2-0:i386 (2:4.0.2-3) ... Setting up libhwloc15:i386 (2.9.0-1) ... Setting up autopoint (0.21-12) ... Setting up libjsoncpp25:i386 (1.9.5-4) ... Setting up libsasl2-2:i386 (2.1.28+dfsg-10) ... Setting up autoconf (2.71-3) ... Setting up libtclap-dev (1.2.5-1+b1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up librhash0:i386 (1.4.3-3) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:i386 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libelf1:i386 (0.188-2.1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3~deb12u1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:i386 (3.6.2-1) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up libtbbbind-2-5:i386 (2021.8.0-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:i386 (7.88.1-10+deb12u4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtbb12:i386 (2021.8.0-2) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up cmake (3.25.1-1) ... Setting up libtbb-dev:i386 (2021.8.0-2) ... Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9+deb12u3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/10707/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bookworm I: user script /srv/workspace/pbuilder/10707/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/twopaco-1.0.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../twopaco_1.0.0+dfsg-1_source.changes dpkg-buildpackage: info: source package twopaco dpkg-buildpackage: info: source version 1.0.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --sourcedir=src dh_auto_clean -O--sourcedir=src dh_autoreconf_clean -O--sourcedir=src dh_clean -O--sourcedir=src debian/rules binary dh binary --sourcedir=src dh_update_autotools_config -O--sourcedir=src dh_autoreconf -O--sourcedir=src dh_auto_configure -O--sourcedir=src cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu ../src -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu dh_auto_build -O--sourcedir=src cd obj-i686-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten /usr/bin/cmake -S/build/reproducible-path/twopaco-1.0.0+dfsg/src -B/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten make -f graphdump/CMakeFiles/graphdump.dir/build.make graphdump/CMakeFiles/graphdump.dir/depend make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten make -f graphconstructor/CMakeFiles/twopaco.dir/build.make graphconstructor/CMakeFiles/twopaco.dir/depend cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/twopaco-1.0.0+dfsg/src /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump/CMakeFiles/graphdump.dir/DependInfo.cmake --color= make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/twopaco-1.0.0+dfsg/src /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor/CMakeFiles/twopaco.dir/DependInfo.cmake --color= make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen make -f graphdump/CMakeFiles/graphdump.dir/build.make graphdump/CMakeFiles/graphdump.dir/build make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen make -f graphconstructor/CMakeFiles/twopaco.dir/build.make graphconstructor/CMakeFiles/twopaco.dir/build [ 7%] Building CXX object graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o -MF CMakeFiles/graphdump.dir/graphdump.cpp.o.d -o CMakeFiles/graphdump.dir/graphdump.cpp.o -c 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/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -MF CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o.d -o CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/streamfastaparser.cpp [ 28%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 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-D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/constructor.cpp.o -MF CMakeFiles/twopaco.dir/constructor.cpp.o.d -o CMakeFiles/twopaco.dir/constructor.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/constructor.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o -MF CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o.d -o CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/concurrentbitvector.cpp [ 50%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/compressedstring.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/compressedstring.cpp.o -MF CMakeFiles/twopaco.dir/compressedstring.cpp.o.d -o CMakeFiles/twopaco.dir/compressedstring.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/compressedstring.cpp [ 57%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o -MF CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/streamfastaparser.cpp [ 64%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/test.cpp.o [ 71%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/vertexenumerator.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/test.cpp.o -MF CMakeFiles/twopaco.dir/test.cpp.o.d -o CMakeFiles/twopaco.dir/test.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/test.cpp [ 78%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/vertexenumerator.cpp.o -MF CMakeFiles/twopaco.dir/vertexenumerator.cpp.o.d -o CMakeFiles/twopaco.dir/vertexenumerator.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/vertexenumerator.cpp [ 85%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/common.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o -MF CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/spooky/SpookyV2.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/common.cpp.o -MF CMakeFiles/twopaco.dir/common.cpp.o.d -o CMakeFiles/twopaco.dir/common.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/common.cpp /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp: In function ‘void GenerateFastaOutput(const std::string&, const std::vector >&, size_t)’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:519:32: warning: unsigned conversion from ‘int64_t’ {aka ‘long long int’} to ‘std::vector::size_type’ {aka ‘unsigned int’} changes value from ‘34359738368’ to ‘0’ [-Woverflow] 519 | std::vector seen(MAX_SEGMENT_NUMBER, 0); | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp: In instantiation of ‘void GenerateGfaOutput(const std::string&, const std::vector >&, size_t, bool, G) [with G = Gfa1Generator; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:676:21: required from here /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:401:32: warning: unsigned conversion from ‘int64_t’ {aka ‘long long int’} to ‘std::vector::size_type’ {aka ‘unsigned int’} changes value from ‘34359738368’ to ‘0’ [-Woverflow] 401 | std::vector seen(MAX_SEGMENT_NUMBER, 0); | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp: In instantiation of ‘void GenerateGfaOutput(const std::string&, const std::vector >&, size_t, bool, G) [with G = Gfa2Generator; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:685:21: required from here /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:401:32: warning: unsigned conversion from ‘int64_t’ {aka ‘long long int’} to ‘std::vector::size_type’ {aka ‘unsigned int’} changes value from ‘34359738368’ to ‘0’ [-Woverflow] /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/constructor.cpp: In function ‘int main(int, char**)’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/constructor.cpp:112:25: warning: conversion from ‘long long unsigned int’ to ‘unsigned int’ changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 112 | UINT64_MAX, | ^~~~~~~~~~ [ 92%] Linking CXX executable graphdump cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphdump.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro CMakeFiles/graphdump.dir/graphdump.cpp.o CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -o graphdump -ltbb -lpthread make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen [ 92%] Built target graphdump [100%] Linking CXX executable twopaco cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/cmake -E cmake_link_script CMakeFiles/twopaco.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o CMakeFiles/twopaco.dir/constructor.cpp.o CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o CMakeFiles/twopaco.dir/compressedstring.cpp.o CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o CMakeFiles/twopaco.dir/test.cpp.o CMakeFiles/twopaco.dir/vertexenumerator.cpp.o CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o CMakeFiles/twopaco.dir/common.cpp.o -o twopaco -ltbb -ltbbmalloc -ltbbmalloc_proxy -lpthread make[3]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen [100%] Built target twopaco make[2]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen debian/rules override_dh_auto_test make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird betreten obj-*/graphconstructor/twopaco --test -f 34 example/example.fa ERROR at chr 0 pos 10, 1 != 0 ERROR at chr 0 pos 55, 1 != 0 ERROR at chr 0 pos 149, 1 != 0 ERROR at chr 0 pos 158, 1 != 0 ERROR at chr 0 pos 184, 1 != 0 ERROR at chr 0 pos 263, 1 != 0 ERROR at chr 0 pos 346, 1 != 0 ERROR at chr 0 pos 465, 1 != 0 ERROR at chr 0 pos 476, 1 != 0 ERROR at chr 0 pos 511, 1 != 0 ERROR at chr 0 pos 590, 1 != 0 ERROR at chr 0 pos 621, 1 != 0 ERROR at chr 0 pos 622, 1 != 0 ERROR at chr 0 pos 708, 1 != 0 ERROR at chr 0 pos 722, 1 != 0 ERROR at chr 0 pos 734, 1 != 0 ERROR at chr 0 pos 738, 1 != 0 ERROR at chr 0 pos 744, 1 != 0 ERROR at chr 0 pos 844, 1 != 0 ERROR at chr 0 pos 885, 1 != 0 ERROR at chr 0 pos 904, 1 != 0 ERROR at chr 0 pos 1113, 1 != 0 ERROR at chr 0 pos 1125, 1 != 0 ERROR at chr 0 pos 1190, 1 != 0 ERROR at chr 0 pos 1197, 1 != 0 ERROR at chr 0 pos 1342, 1 != 0 ERROR at chr 0 pos 1468, 1 != 0 ERROR at chr 0 pos 1547, 1 != 0 ERROR at chr 0 pos 1556, 1 != 0 ERROR at chr 0 pos 1612, 1 != 0 ERROR at chr 0 pos 1827, 1 != 0 ERROR at chr 0 pos 1831, 1 != 0 ERROR at chr 0 pos 1877, 1 != 0 ERROR at chr 0 pos 1917, 1 != 0 ERROR at chr 0 pos 1987, 1 != 0 ERROR at chr 0 pos 2074, 1 != 0 ERROR at chr 0 pos 2076, 1 != 0 ERROR at chr 0 pos 2094, 1 != 0 ERROR at chr 0 pos 2134, 1 != 0 ERROR at chr 0 pos 2442, 1 != 0 ERROR at chr 0 pos 2472, 1 != 0 ERROR at chr 0 pos 2515, 1 != 0 ERROR at chr 0 pos 2535, 1 != 0 ERROR at chr 0 pos 2621, 1 != 0 ERROR at chr 0 pos 2650, 1 != 0 ERROR at chr 0 pos 2655, 1 != 0 ERROR at chr 0 pos 2668, 1 != 0 ERROR at chr 0 pos 2672, 1 != 0 ERROR at chr 0 pos 2689, 1 != 0 ERROR at chr 0 pos 2705, 1 != 0 ERROR at chr 0 pos 2746, 1 != 0 ERROR at chr 0 pos 2906, 1 != 0 ERROR at chr 0 pos 2924, 1 != 0 ERROR at chr 0 pos 3021, 1 != 0 ERROR at chr 0 pos 3024, 1 != 0 ERROR at chr 0 pos 3043, 1 != 0 ERROR at chr 0 pos 3133, 1 != 0 ERROR at chr 0 pos 3160, 1 != 0 ERROR at chr 0 pos 3172, 1 != 0 ERROR at chr 0 pos 3341, 1 != 0 ERROR at chr 0 pos 3684, 1 != 0 ERROR at chr 0 pos 3704, 1 != 0 ERROR at chr 0 pos 3825, 1 != 0 ERROR at chr 0 pos 3852, 1 != 0 ERROR at chr 0 pos 3922, 1 != 0 ERROR at chr 0 pos 3923, 1 != 0 ERROR at chr 0 pos 4041, 1 != 0 ERROR at chr 0 pos 4095, 1 != 0 ERROR at chr 0 pos 4100, 1 != 0 ERROR at chr 0 pos 4131, 1 != 0 ERROR at chr 0 pos 4291, 1 != 0 ERROR at chr 0 pos 4376, 1 != 0 ERROR at chr 0 pos 4530, 1 != 0 ERROR at chr 0 pos 4620, 1 != 0 ERROR at chr 0 pos 4816, 1 != 0 ERROR at chr 0 pos 4887, 1 != 0 ERROR at chr 0 pos 4898, 1 != 0 ERROR at chr 0 pos 4954, 1 != 0 ERROR at chr 0 pos 4990, 1 != 0 ERROR at chr 0 pos 5053, 1 != 0 ERROR at chr 0 pos 5090, 1 != 0 ERROR at chr 0 pos 5122, 1 != 0 ERROR at chr 0 pos 5187, 1 != 0 ERROR at chr 0 pos 5329, 1 != 0 ERROR at chr 0 pos 5397, 1 != 0 ERROR at chr 0 pos 5521, 1 != 0 ERROR at chr 0 pos 5586, 1 != 0 ERROR at chr 0 pos 5713, 1 != 0 ERROR at chr 0 pos 5726, 1 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ERROR at chr 0 pos 8435, 1 != 0 ERROR at chr 0 pos 8486, 1 != 0 ERROR at chr 0 pos 8517, 1 != 0 ERROR at chr 0 pos 8521, 1 != 0 ERROR at chr 0 pos 8567, 1 != 0 ERROR at chr 0 pos 8599, 1 != 0 ERROR at chr 0 pos 8742, 1 != 0 ERROR at chr 0 pos 8841, 1 != 0 ERROR at chr 1 pos 7, 1 != 0 ERROR at chr 1 pos 56, 1 != 0 ERROR at chr 1 pos 81, 1 != 0 ERROR at chr 1 pos 86, 1 != 0 ERROR at chr 1 pos 153, 1 != 0 ERROR at chr 1 pos 248, 1 != 0 ERROR at chr 1 pos 266, 1 != 0 ERROR at chr 1 pos 347, 1 != 0 ERROR at chr 1 pos 478, 1 != 0 ERROR at chr 1 pos 513, 1 != 0 ERROR at chr 1 pos 575, 1 != 0 ERROR at chr 1 pos 593, 1 != 0 ERROR at chr 1 pos 693, 1 != 0 ERROR at chr 1 pos 739, 1 != 0 ERROR at chr 1 pos 743, 1 != 0 ERROR at chr 1 pos 848, 1 != 0 ERROR at chr 1 pos 866, 1 != 0 ERROR at chr 1 pos 871, 1 != 0 ERROR at chr 1 pos 910, 1 != 0 ERROR at chr 1 pos 1115, 1 != 0 ERROR at chr 1 pos 1127, 1 != 0 ERROR at chr 1 pos 1192, 1 != 0 ERROR at chr 1 pos 1199, 1 != 0 ERROR at chr 1 pos 1254, 1 != 0 ERROR at chr 1 pos 1281, 1 != 0 ERROR at chr 1 pos 1464, 1 != 0 ERROR at chr 1 pos 1544, 1 != 0 ERROR at chr 1 pos 1553, 1 != 0 ERROR at chr 1 pos 1609, 1 != 0 ERROR at chr 1 pos 1713, 1 != 0 ERROR at chr 1 pos 1829, 1 != 0 ERROR at chr 1 pos 1917, 1 != 0 ERROR at chr 1 pos 1955, 1 != 0 ERROR at chr 1 pos 1974, 1 != 0 ERROR at chr 1 pos 2006, 1 != 0 ERROR at chr 1 pos 2072, 1 != 0 ERROR at chr 1 pos 2074, 1 != 0 ERROR at chr 1 pos 2134, 1 != 0 ERROR at chr 1 pos 2388, 1 != 0 ERROR at chr 1 pos 2444, 1 != 0 ERROR at chr 1 pos 2516, 1 != 0 ERROR at chr 1 pos 2536, 1 != 0 ERROR at chr 1 pos 2649, 1 != 0 ERROR at chr 1 pos 2654, 1 != 0 ERROR at chr 1 pos 2667, 1 != 0 ERROR at chr 1 pos 2671, 1 != 0 ERROR at chr 1 pos 2704, 1 != 0 ERROR at chr 1 pos 2743, 1 != 0 ERROR at chr 1 pos 2755, 1 != 0 ERROR at chr 1 pos 2874, 1 != 0 ERROR at chr 1 pos 3018, 1 != 0 ERROR at chr 1 pos 3021, 1 != 0 ERROR at chr 1 pos 3041, 1 != 0 ERROR at chr 1 pos 3128, 1 != 0 ERROR at chr 1 pos 3154, 1 != 0 ERROR at chr 1 pos 3166, 1 != 0 ERROR at chr 1 pos 3226, 1 != 0 ERROR at chr 1 pos 3337, 1 != 0 ERROR at chr 1 pos 3588, 1 != 0 ERROR at chr 1 pos 3678, 1 != 0 ERROR at chr 1 pos 3771, 1 != 0 ERROR at chr 1 pos 3822, 1 != 0 ERROR at chr 1 pos 3825, 1 != 0 ERROR at chr 1 pos 3876, 1 != 0 ERROR at chr 1 pos 3914, 1 != 0 ERROR at chr 1 pos 3915, 1 != 0 ERROR at chr 1 pos 4037, 1 != 0 ERROR at chr 1 pos 4366, 1 != 0 ERROR at chr 1 pos 4492, 1 != 0 ERROR at chr 1 pos 4526, 1 != 0 ERROR at chr 1 pos 4606, 1 != 0 ERROR at chr 1 pos 4713, 1 != 0 ERROR at chr 1 pos 4877, 1 != 0 ERROR at chr 1 pos 4977, 1 != 0 ERROR at chr 1 pos 5037, 1 != 0 ERROR at chr 1 pos 5075, 1 != 0 ERROR at chr 1 pos 5106, 1 != 0 ERROR at chr 1 pos 5312, 1 != 0 ERROR at chr 1 pos 5319, 1 != 0 ERROR at chr 1 pos 5379, 1 != 0 ERROR at chr 1 pos 5420, 1 != 0 ERROR at chr 1 pos 5469, 1 != 0 ERROR at chr 1 pos 5501, 1 != 0 ERROR at chr 1 pos 5549, 1 != 0 ERROR at chr 1 pos 5561, 1 != 0 ERROR at chr 1 pos 5651, 1 != 0 ERROR at chr 1 pos 5696, 1 != 0 ERROR at chr 1 pos 5716, 1 != 0 ERROR at chr 1 pos 5756, 1 != 0 ERROR at chr 1 pos 5790, 1 != 0 ERROR at chr 1 pos 5817, 1 != 0 ERROR at chr 1 pos 5936, 1 != 0 ERROR at chr 1 pos 5948, 1 != 0 ERROR at chr 1 pos 6054, 1 != 0 ERROR at chr 1 pos 6133, 1 != 0 ERROR at chr 1 pos 6140, 1 != 0 ERROR at chr 1 pos 6288, 1 != 0 ERROR at chr 1 pos 6301, 1 != 0 ERROR at chr 1 pos 6436, 1 != 0 ERROR at chr 1 pos 6551, 1 != 0 ERROR at chr 1 pos 6694, 1 != 0 ERROR at chr 1 pos 6768, 1 != 0 ERROR at chr 1 pos 6769, 1 != 0 ERROR at chr 1 pos 6920, 1 != 0 ERROR at chr 1 pos 6944, 1 != 0 ERROR at chr 1 pos 7031, 1 != 0 ERROR at chr 1 pos 7039, 1 != 0 ERROR at chr 1 pos 7113, 1 != 0 ERROR at chr 1 pos 7118, 1 != 0 ERROR at chr 1 pos 7150, 1 != 0 ERROR at chr 1 pos 7225, 1 != 0 ERROR at chr 1 pos 7246, 1 != 0 ERROR at chr 1 pos 7251, 1 != 0 ERROR at chr 1 pos 7594, 1 != 0 ERROR at chr 1 pos 7740, 1 != 0 ERROR at chr 1 pos 7757, 1 != 0 ERROR at chr 1 pos 7915, 1 != 0 ERROR at chr 1 pos 7947, 1 != 0 ERROR at chr 1 pos 7991, 1 != 0 ERROR at chr 1 pos 8011, 1 != 0 ERROR at chr 1 pos 8039, 1 != 0 ERROR at chr 1 pos 8059, 1 != 0 ERROR at chr 1 pos 8092, 1 != 0 ERROR at chr 1 pos 8101, 1 != 0 ERROR at chr 1 pos 8132, 1 != 0 ERROR at chr 1 pos 8216, 1 != 0 ERROR at chr 1 pos 8217, 1 != 0 ERROR at chr 1 pos 8223, 1 != 0 ERROR at chr 1 pos 8303, 1 != 0 ERROR at chr 1 pos 8385, 1 != 0 ERROR at chr 1 pos 8424, 1 != 0 ERROR at chr 1 pos 8443, 1 != 0 ERROR at chr 1 pos 8504, 1 != 0 ERROR at chr 1 pos 8553, 1 != 0 ERROR at chr 1 pos 8585, 1 != 0 ERROR at chr 1 pos 8626, 1 != 0 ERROR at chr 1 pos 8726, 1 != 0 ERROR at chr 1 pos 8829, 1 != 0 ERROR at chr 1 pos 8855, 1 != 0 ERROR at chr 1 pos 8857, 1 != 0 ERROR at chr 2 pos 148, 1 != 0 ERROR at chr 2 pos 157, 1 != 0 ERROR at chr 2 pos 184, 1 != 0 ERROR at chr 2 pos 214, 1 != 0 ERROR at chr 2 pos 263, 1 != 0 ERROR at chr 2 pos 348, 1 != 0 ERROR at chr 2 pos 449, 1 != 0 ERROR at chr 2 pos 477, 1 != 0 ERROR at chr 2 pos 512, 1 != 0 ERROR at chr 2 pos 566, 1 != 0 ERROR at chr 2 pos 598, 1 != 0 ERROR at chr 2 pos 619, 1 != 0 ERROR at chr 2 pos 622, 1 != 0 ERROR at chr 2 pos 623, 1 != 0 ERROR at chr 2 pos 725, 1 != 0 ERROR at chr 2 pos 737, 1 != 0 ERROR at chr 2 pos 741, 1 != 0 ERROR at chr 2 pos 747, 1 != 0 ERROR at chr 2 pos 912, 1 != 0 ERROR at chr 2 pos 953, 1 != 0 ERROR at chr 2 pos 1118, 1 != 0 ERROR at chr 2 pos 1130, 1 != 0 ERROR at chr 2 pos 1195, 1 != 0 ERROR at chr 2 pos 1331, 1 != 0 ERROR at chr 2 pos 1425, 1 != 0 ERROR at chr 2 pos 1447, 1 != 0 ERROR at chr 2 pos 1553, 1 != 0 ERROR at chr 2 pos 1562, 1 != 0 ERROR at chr 2 pos 1628, 1 != 0 ERROR at chr 2 pos 1691, 1 != 0 ERROR at chr 2 pos 1693, 1 != 0 ERROR at chr 2 pos 1770, 1 != 0 ERROR at chr 2 pos 1831, 1 != 0 ERROR at chr 2 pos 1835, 1 != 0 ERROR at chr 2 pos 1863, 1 != 0 ERROR at chr 2 pos 1883, 1 != 0 ERROR at chr 2 pos 1991, 1 != 0 ERROR at chr 2 pos 1997, 1 != 0 ERROR at chr 2 pos 2015, 1 != 0 ERROR at chr 2 pos 2077, 1 != 0 ERROR at chr 2 pos 2079, 1 != 0 ERROR at chr 2 pos 2096, 1 != 0 ERROR at chr 2 pos 2136, 1 != 0 ERROR at chr 2 pos 2164, 1 != 0 ERROR at chr 2 pos 2167, 1 != 0 ERROR at chr 2 pos 2382, 1 != 0 ERROR at chr 2 pos 2447, 1 != 0 ERROR at chr 2 pos 2478, 1 != 0 ERROR at chr 2 pos 2522, 1 != 0 ERROR at chr 2 pos 2542, 1 != 0 ERROR at chr 2 pos 2628, 1 != 0 ERROR at chr 2 pos 2663, 1 != 0 ERROR at chr 2 pos 2676, 1 != 0 ERROR at chr 2 pos 2680, 1 != 0 ERROR at chr 2 pos 2692, 1 != 0 ERROR at chr 2 pos 2696, 1 != 0 ERROR at chr 2 pos 2712, 1 != 0 ERROR at chr 2 pos 2753, 1 != 0 ERROR at chr 2 pos 2799, 1 != 0 ERROR at chr 2 pos 2871, 1 != 0 ERROR at chr 2 pos 2915, 1 != 0 ERROR at chr 2 pos 3034, 1 != 0 ERROR at chr 2 pos 3114, 1 != 0 ERROR at chr 2 pos 3141, 1 != 0 ERROR at chr 2 pos 3168, 1 != 0 ERROR at chr 2 pos 3697, 1 != 0 ERROR at chr 2 pos 3837, 1 != 0 ERROR at chr 2 pos 3864, 1 != 0 ERROR at chr 2 pos 4061, 1 != 0 ERROR at chr 2 pos 4152, 1 != 0 ERROR at chr 2 pos 4392, 1 != 0 ERROR at chr 2 pos 4548, 1 != 0 ERROR at chr 2 pos 4614, 1 != 0 ERROR at chr 2 pos 4794, 1 != 0 ERROR at chr 2 pos 4838, 1 != 0 ERROR at chr 2 pos 4910, 1 != 0 ERROR at chr 2 pos 4921, 1 != 0 ERROR at chr 2 pos 4978, 1 != 0 ERROR at chr 2 pos 5012, 1 != 0 ERROR at chr 2 pos 5073, 1 != 0 ERROR at chr 2 pos 5110, 1 != 0 ERROR at chr 2 pos 5140, 1 != 0 ERROR at chr 2 pos 5177, 1 != 0 ERROR at chr 2 pos 5204, 1 != 0 ERROR at chr 2 pos 5224, 1 != 0 ERROR at chr 2 pos 5334, 1 != 0 ERROR at chr 2 pos 5348, 1 != 0 ERROR at chr 2 pos 5355, 1 != 0 ERROR at chr 2 pos 5412, 1 != 0 ERROR at chr 2 pos 5602, 1 != 0 ERROR at chr 2 pos 5744, 1 != 0 ERROR at chr 2 pos 5749, 1 != 0 ERROR at chr 2 pos 5787, 1 != 0 ERROR at chr 2 pos 5819, 1 != 0 ERROR at chr 2 pos 5888, 1 != 0 ERROR at chr 2 pos 5933, 1 != 0 ERROR at chr 2 pos 5963, 1 != 0 ERROR at chr 2 pos 5980, 1 != 0 ERROR at chr 2 pos 6068, 1 != 0 ERROR at chr 2 pos 6108, 1 != 0 ERROR at chr 2 pos 6195, 1 != 0 ERROR at chr 2 pos 6315, 1 != 0 ERROR at chr 2 pos 6382, 1 != 0 ERROR at chr 2 pos 6446, 1 != 0 ERROR at chr 2 pos 6566, 1 != 0 ERROR at chr 2 pos 6721, 1 != 0 ERROR at chr 2 pos 7040, 1 != 0 ERROR at chr 2 pos 7048, 1 != 0 ERROR at chr 2 pos 7075, 1 != 0 ERROR at chr 2 pos 7162, 1 != 0 ERROR at chr 2 pos 7196, 1 != 0 ERROR at chr 2 pos 7292, 1 != 0 ERROR at chr 2 pos 7293, 1 != 0 ERROR at chr 2 pos 7519, 1 != 0 ERROR at chr 2 pos 7614, 1 != 0 ERROR at chr 2 pos 7667, 1 != 0 ERROR at chr 2 pos 7780, 1 != 0 ERROR at chr 2 pos 7967, 1 != 0 ERROR at chr 2 pos 8013, 1 != 0 ERROR at chr 2 pos 8033, 1 != 0 ERROR at chr 2 pos 8062, 1 != 0 ERROR at chr 2 pos 8082, 1 != 0 ERROR at chr 2 pos 8115, 1 != 0 ERROR at chr 2 pos 8158, 1 != 0 ERROR at chr 2 pos 8246, 1 != 0 ERROR at chr 2 pos 8337, 1 != 0 ERROR at chr 2 pos 8456, 1 != 0 ERROR at chr 2 pos 8506, 1 != 0 ERROR at chr 2 pos 8537, 1 != 0 ERROR at chr 2 pos 8588, 1 != 0 ERROR at chr 2 pos 8620, 1 != 0 ERROR at chr 2 pos 8747, 1 != 0 ERROR at chr 2 pos 8757, 1 != 0 ERROR at chr 2 pos 8797, 1 != 0 ERROR at chr 3 pos 11, 1 != 0 ERROR at chr 3 pos 57, 1 != 0 ERROR at chr 3 pos 103, 1 != 0 ERROR at chr 3 pos 151, 1 != 0 ERROR at chr 3 pos 160, 1 != 0 ERROR at chr 3 pos 186, 1 != 0 ERROR at chr 3 pos 196, 1 != 0 ERROR at chr 3 pos 216, 1 != 0 ERROR at chr 3 pos 349, 1 != 0 ERROR at chr 3 pos 469, 1 != 0 ERROR at chr 3 pos 480, 1 != 0 ERROR at chr 3 pos 516, 1 != 0 ERROR at chr 3 pos 594, 1 != 0 ERROR at chr 3 pos 624, 1 != 0 ERROR at chr 3 pos 625, 1 != 0 ERROR at chr 3 pos 707, 1 != 0 ERROR at chr 3 pos 709, 1 != 0 ERROR at chr 3 pos 724, 1 != 0 ERROR at chr 3 pos 736, 1 != 0 ERROR at chr 3 pos 740, 1 != 0 ERROR at chr 3 pos 849, 1 != 0 ERROR at chr 3 pos 881, 1 != 0 ERROR at chr 3 pos 890, 1 != 0 ERROR at chr 3 pos 909, 1 != 0 ERROR at chr 3 pos 942, 1 != 0 ERROR at chr 3 pos 1088, 1 != 0 ERROR at chr 3 pos 1120, 1 != 0 ERROR at chr 3 pos 1132, 1 != 0 ERROR at chr 3 pos 1180, 1 != 0 ERROR at chr 3 pos 1199, 1 != 0 ERROR at chr 3 pos 1206, 1 != 0 ERROR at chr 3 pos 1350, 1 != 0 ERROR at chr 3 pos 1372, 1 != 0 ERROR at chr 3 pos 1419, 1 != 0 ERROR at chr 3 pos 1443, 1 != 0 ERROR at chr 3 pos 1476, 1 != 0 ERROR at chr 3 pos 1531, 1 != 0 ERROR at chr 3 pos 1552, 1 != 0 ERROR at chr 3 pos 1617, 1 != 0 ERROR at chr 3 pos 1692, 1 != 0 ERROR at chr 3 pos 1884, 1 != 0 ERROR at chr 3 pos 1995, 1 != 0 ERROR at chr 3 pos 2086, 1 != 0 ERROR at chr 3 pos 2104, 1 != 0 ERROR at chr 3 pos 2146, 1 != 0 ERROR at chr 3 pos 2189, 1 != 0 ERROR at chr 3 pos 2308, 1 != 0 ERROR at chr 3 pos 2451, 1 != 0 ERROR at chr 3 pos 2481, 1 != 0 ERROR at chr 3 pos 2523, 1 != 0 ERROR at chr 3 pos 2543, 1 != 0 ERROR at chr 3 pos 2659, 1 != 0 ERROR at chr 3 pos 2664, 1 != 0 ERROR at chr 3 pos 2678, 1 != 0 ERROR at chr 3 pos 2682, 1 != 0 ERROR at chr 3 pos 2714, 1 != 0 ERROR at chr 3 pos 2754, 1 != 0 ERROR at chr 3 pos 2830, 1 != 0 ERROR at chr 3 pos 2914, 1 != 0 ERROR at chr 3 pos 2924, 1 != 0 ERROR at chr 3 pos 2931, 1 != 0 ERROR at chr 3 pos 3027, 1 != 0 ERROR at chr 3 pos 3030, 1 != 0 ERROR at chr 3 pos 3048, 1 != 0 ERROR at chr 3 pos 3138, 1 != 0 ERROR at chr 3 pos 3165, 1 != 0 ERROR at chr 3 pos 3177, 1 != 0 ERROR at chr 3 pos 3226, 1 != 0 ERROR at chr 3 pos 3237, 1 != 0 ERROR at chr 3 pos 3346, 1 != 0 ERROR at chr 3 pos 3433, 1 != 0 ERROR at chr 3 pos 3751, 1 != 0 ERROR at chr 3 pos 3752, 1 != 0 ERROR at chr 3 pos 3765, 1 != 0 ERROR at chr 3 pos 3818, 1 != 0 ERROR at chr 3 pos 3821, 1 != 0 ERROR at chr 3 pos 3844, 1 != 0 ERROR at chr 3 pos 3917, 1 != 0 ERROR at chr 3 pos 3930, 1 != 0 ERROR at chr 3 pos 4027, 1 != 0 ERROR at chr 3 pos 4080, 1 != 0 ERROR at chr 3 pos 4085, 1 != 0 ERROR at chr 3 pos 4129, 1 != 0 ERROR at chr 3 pos 4278, 1 != 0 ERROR at chr 3 pos 4285, 1 != 0 ERROR at chr 3 pos 4363, 1 != 0 ERROR at chr 3 pos 4442, 1 != 0 ERROR at chr 3 pos 4516, 1 != 0 ERROR at chr 3 pos 4803, 1 != 0 ERROR at chr 3 pos 4862, 1 != 0 ERROR at chr 3 pos 4875, 1 != 0 ERROR at chr 3 pos 4886, 1 != 0 ERROR at chr 3 pos 4942, 1 != 0 ERROR at chr 3 pos 4976, 1 != 0 ERROR at chr 3 pos 5040, 1 != 0 ERROR at chr 3 pos 5077, 1 != 0 ERROR at chr 3 pos 5110, 1 != 0 ERROR at chr 3 pos 5298, 1 != 0 ERROR at chr 3 pos 5379, 1 != 0 ERROR at chr 3 pos 5473, 1 != 0 ERROR at chr 3 pos 5507, 1 != 0 ERROR at chr 3 pos 5571, 1 != 0 ERROR at chr 3 pos 5636, 1 != 0 ERROR at chr 3 pos 5709, 1 != 0 ERROR at chr 3 pos 5714, 1 != 0 ERROR at chr 3 pos 5753, 1 != 0 ERROR at chr 3 pos 5786, 1 != 0 ERROR at chr 3 pos 5802, 1 != 0 ERROR at chr 3 pos 5805, 1 != 0 ERROR at chr 3 pos 5850, 1 != 0 ERROR at chr 3 pos 5925, 1 != 0 ERROR at chr 3 pos 6037, 1 != 0 ERROR at chr 3 pos 6091, 1 != 0 ERROR at chr 3 pos 6095, 1 != 0 ERROR at chr 3 pos 6104, 1 != 0 ERROR at chr 3 pos 6124, 1 != 0 ERROR at chr 3 pos 6292, 1 != 0 ERROR at chr 3 pos 6369, 1 != 0 ERROR at chr 3 pos 6383, 1 != 0 ERROR at chr 3 pos 6417, 1 != 0 ERROR at chr 3 pos 6548, 1 != 0 ERROR at chr 3 pos 6762, 1 != 0 ERROR at chr 3 pos 6936, 1 != 0 ERROR at chr 3 pos 6960, 1 != 0 ERROR at chr 3 pos 6961, 1 != 0 ERROR at chr 3 pos 7020, 1 != 0 ERROR at chr 3 pos 7056, 1 != 0 ERROR at chr 3 pos 7104, 1 != 0 ERROR at chr 3 pos 7144, 1 != 0 ERROR at chr 3 pos 7342, 1 != 0 ERROR at chr 3 pos 7587, 1 != 0 ERROR at chr 3 pos 7620, 1 != 0 ERROR at chr 3 pos 7641, 1 != 0 ERROR at chr 3 pos 7749, 1 != 0 ERROR at chr 3 pos 7882, 1 != 0 ERROR at chr 3 pos 7907, 1 != 0 ERROR at chr 3 pos 7919, 1 != 0 ERROR at chr 3 pos 7987, 1 != 0 ERROR at chr 3 pos 8007, 1 != 0 ERROR at chr 3 pos 8036, 1 != 0 ERROR at chr 3 pos 8088, 1 != 0 ERROR at chr 3 pos 8130, 1 != 0 ERROR at chr 3 pos 8141, 1 != 0 ERROR at chr 3 pos 8225, 1 != 0 ERROR at chr 3 pos 8428, 1 != 0 ERROR at chr 3 pos 8480, 1 != 0 ERROR at chr 3 pos 8513, 1 != 0 ERROR at chr 3 pos 8517, 1 != 0 ERROR at chr 3 pos 8563, 1 != 0 ERROR at chr 3 pos 8593, 1 != 0 ERROR at chr 3 pos 8621, 1 != 0 ERROR at chr 3 pos 8626, 1 != 0 ERROR at chr 3 pos 8733, 1 != 0 ERROR at chr 3 pos 8774, 1 != 0 ERROR at chr 3 pos 8871, 1 != 0 ERROR at chr 3 pos 8912, 1 != 0 ERROR at chr 3 pos 8947, 1 != 0 ERROR at chr 4 pos 162, 1 != 0 ERROR at chr 4 pos 189, 1 != 0 ERROR at chr 4 pos 267, 1 != 0 ERROR at chr 4 pos 351, 1 != 0 ERROR at chr 4 pos 469, 1 != 0 ERROR at chr 4 pos 481, 1 != 0 ERROR at chr 4 pos 514, 1 != 0 ERROR at chr 4 pos 624, 1 != 0 ERROR at chr 4 pos 625, 1 != 0 ERROR at chr 4 pos 724, 1 != 0 ERROR at chr 4 pos 740, 1 != 0 ERROR at chr 4 pos 746, 1 != 0 ERROR at chr 4 pos 787, 1 != 0 ERROR at chr 4 pos 849, 1 != 0 ERROR at chr 4 pos 889, 1 != 0 ERROR at chr 4 pos 910, 1 != 0 ERROR at chr 4 pos 1117, 1 != 0 ERROR at chr 4 pos 1129, 1 != 0 ERROR at chr 4 pos 1193, 1 != 0 ERROR at chr 4 pos 1200, 1 != 0 ERROR at chr 4 pos 1300, 1 != 0 ERROR at chr 4 pos 1344, 1 != 0 ERROR at chr 4 pos 1555, 1 != 0 ERROR at chr 4 pos 1604, 1 != 0 ERROR at chr 4 pos 1621, 1 != 0 ERROR at chr 4 pos 1647, 1 != 0 ERROR at chr 4 pos 1821, 1 != 0 ERROR at chr 4 pos 1834, 1 != 0 ERROR at chr 4 pos 1838, 1 != 0 ERROR at chr 4 pos 1883, 1 != 0 ERROR at chr 4 pos 1923, 1 != 0 ERROR at chr 4 pos 2083, 1 != 0 ERROR at chr 4 pos 2085, 1 != 0 ERROR at chr 4 pos 2104, 1 != 0 ERROR at chr 4 pos 2145, 1 != 0 ERROR at chr 4 pos 2392, 1 != 0 ERROR at chr 4 pos 2477, 1 != 0 ERROR at chr 4 pos 2521, 1 != 0 ERROR at chr 4 pos 2541, 1 != 0 ERROR at chr 4 pos 2627, 1 != 0 ERROR at chr 4 pos 2659, 1 != 0 ERROR at chr 4 pos 2672, 1 != 0 ERROR at chr 4 pos 2694, 1 != 0 ERROR at chr 4 pos 2710, 1 != 0 ERROR at chr 4 pos 2848, 1 != 0 ERROR at chr 4 pos 2872, 1 != 0 ERROR at chr 4 pos 2873, 1 != 0 ERROR at chr 4 pos 2911, 1 != 0 ERROR at chr 4 pos 2929, 1 != 0 ERROR at chr 4 pos 3026, 1 != 0 ERROR at chr 4 pos 3029, 1 != 0 ERROR at chr 4 pos 3136, 1 != 0 ERROR at chr 4 pos 3163, 1 != 0 ERROR at chr 4 pos 3175, 1 != 0 ERROR at chr 4 pos 3233, 1 != 0 ERROR at chr 4 pos 3345, 1 != 0 ERROR at chr 4 pos 3455, 1 != 0 ERROR at chr 4 pos 3496, 1 != 0 ERROR at chr 4 pos 3524, 1 != 0 ERROR at chr 4 pos 3833, 1 != 0 ERROR at chr 4 pos 3860, 1 != 0 ERROR at chr 4 pos 3923, 1 != 0 ERROR at chr 4 pos 3931, 1 != 0 ERROR at chr 4 pos 3932, 1 != 0 ERROR at chr 4 pos 4041, 1 != 0 ERROR at chr 4 pos 4050, 1 != 0 ERROR at chr 4 pos 4106, 1 != 0 ERROR at chr 4 pos 4111, 1 != 0 ERROR at chr 4 pos 4141, 1 != 0 ERROR at chr 4 pos 4281, 1 != 0 ERROR at chr 4 pos 4388, 1 != 0 ERROR at chr 4 pos 4429, 1 != 0 ERROR at chr 4 pos 4454, 1 != 0 ERROR at chr 4 pos 4543, 1 != 0 ERROR at chr 4 pos 4632, 1 != 0 ERROR at chr 4 pos 4830, 1 != 0 ERROR at chr 4 pos 4901, 1 != 0 ERROR at chr 4 pos 5007, 1 != 0 ERROR at chr 4 pos 5072, 1 != 0 ERROR at chr 4 pos 5109, 1 != 0 ERROR at chr 4 pos 5139, 1 != 0 ERROR at chr 4 pos 5203, 1 != 0 ERROR at chr 4 pos 5237, 1 != 0 ERROR at chr 4 pos 5349, 1 != 0 ERROR at chr 4 pos 5540, 1 != 0 ERROR at chr 4 pos 5607, 1 != 0 ERROR at chr 4 pos 5734, 1 != 0 ERROR at chr 4 pos 5748, 1 != 0 ERROR at chr 4 pos 5753, 1 != 0 ERROR at chr 4 pos 5794, 1 != 0 ERROR at chr 4 pos 5816, 1 != 0 ERROR at chr 4 pos 5892, 1 != 0 ERROR at chr 4 pos 5981, 1 != 0 ERROR at chr 4 pos 6167, 1 != 0 ERROR at chr 4 pos 6340, 1 != 0 ERROR at chr 4 pos 6460, 1 != 0 ERROR at chr 4 pos 6593, 1 != 0 ERROR at chr 4 pos 6632, 1 != 0 ERROR at chr 4 pos 6708, 1 != 0 ERROR at chr 4 pos 6973, 1 != 0 ERROR at chr 4 pos 7057, 1 != 0 ERROR at chr 4 pos 7065, 1 != 0 ERROR at chr 4 pos 7091, 1 != 0 ERROR at chr 4 pos 7129, 1 != 0 ERROR at chr 4 pos 7167, 1 != 0 ERROR at chr 4 pos 7176, 1 != 0 ERROR at chr 4 pos 7341, 1 != 0 ERROR at chr 4 pos 7624, 1 != 0 ERROR at chr 4 pos 7679, 1 != 0 ERROR at chr 4 pos 7694, 1 != 0 ERROR at chr 4 pos 7948, 1 != 0 ERROR at chr 4 pos 7979, 1 != 0 ERROR at chr 4 pos 8001, 1 != 0 ERROR at chr 4 pos 8024, 1 != 0 ERROR at chr 4 pos 8043, 1 != 0 ERROR at chr 4 pos 8071, 1 != 0 ERROR at chr 4 pos 8094, 1 != 0 ERROR at chr 4 pos 8120, 1 != 0 ERROR at chr 4 pos 8144, 1 != 0 ERROR at chr 4 pos 8161, 1 != 0 ERROR at chr 4 pos 8252, 1 != 0 ERROR at chr 4 pos 8338, 1 != 0 ERROR at chr 4 pos 8373, 1 != 0 ERROR at chr 4 pos 8438, 1 != 0 ERROR at chr 4 pos 8524, 1 != 0 ERROR at chr 4 pos 8540, 1 != 0 ERROR at chr 4 pos 8544, 1 != 0 ERROR at chr 4 pos 8591, 1 != 0 ERROR at chr 4 pos 8610, 1 != 0 ERROR at chr 4 pos 8624, 1 != 0 ERROR at chr 4 pos 8657, 1 != 0 ERROR at chr 4 pos 8767, 1 != 0 ERROR at chr 4 pos 8862, 1 != 0 ERROR at chr 4 pos 8878, 1 != 0 ERROR at chr 4 pos 8920, 1 != 0 ERROR at chr 4 pos 8921, 1 != 0 ERROR at chr 5 pos 6, 1 != 0 ERROR at chr 5 pos 55, 1 != 0 ERROR at chr 5 pos 268, 1 != 0 ERROR at chr 5 pos 349, 1 != 0 ERROR at chr 5 pos 440, 1 != 0 ERROR at chr 5 pos 455, 1 != 0 ERROR at chr 5 pos 467, 1 != 0 ERROR at chr 5 pos 478, 1 != 0 ERROR at chr 5 pos 593, 1 != 0 ERROR at chr 5 pos 624, 1 != 0 ERROR at chr 5 pos 625, 1 != 0 ERROR at chr 5 pos 637, 1 != 0 ERROR at chr 5 pos 723, 1 != 0 ERROR at chr 5 pos 735, 1 != 0 ERROR at chr 5 pos 739, 1 != 0 ERROR at chr 5 pos 745, 1 != 0 ERROR at chr 5 pos 844, 1 != 0 ERROR at chr 5 pos 887, 1 != 0 ERROR at chr 5 pos 920, 1 != 0 ERROR at chr 5 pos 968, 1 != 0 ERROR at chr 5 pos 1134, 1 != 0 ERROR at chr 5 pos 1201, 1 != 0 ERROR at chr 5 pos 1208, 1 != 0 ERROR at chr 5 pos 1240, 1 != 0 ERROR at chr 5 pos 1348, 1 != 0 ERROR at chr 5 pos 1473, 1 != 0 ERROR at chr 5 pos 1476, 1 != 0 ERROR at chr 5 pos 1555, 1 != 0 ERROR at chr 5 pos 1564, 1 != 0 ERROR at chr 5 pos 1615, 1 != 0 ERROR at chr 5 pos 1619, 1 != 0 ERROR at chr 5 pos 1649, 1 != 0 ERROR at chr 5 pos 1694, 1 != 0 ERROR at chr 5 pos 1833, 1 != 0 ERROR at chr 5 pos 1837, 1 != 0 ERROR at chr 5 pos 1881, 1 != 0 ERROR at chr 5 pos 1920, 1 != 0 ERROR at chr 5 pos 1990, 1 != 0 ERROR at chr 5 pos 2056, 1 != 0 ERROR at chr 5 pos 2077, 1 != 0 ERROR at chr 5 pos 2079, 1 != 0 ERROR at chr 5 pos 2096, 1 != 0 ERROR at chr 5 pos 2138, 1 != 0 ERROR at chr 5 pos 2405, 1 != 0 ERROR at chr 5 pos 2442, 1 != 0 ERROR at chr 5 pos 2472, 1 != 0 ERROR at chr 5 pos 2536, 1 != 0 ERROR at chr 5 pos 2621, 1 != 0 ERROR at chr 5 pos 2655, 1 != 0 ERROR at chr 5 pos 2668, 1 != 0 ERROR at chr 5 pos 2672, 1 != 0 ERROR at chr 5 pos 2704, 1 != 0 ERROR at chr 5 pos 2744, 1 != 0 ERROR at chr 5 pos 2901, 1 != 0 ERROR at chr 5 pos 2923, 1 != 0 ERROR at chr 5 pos 2998, 1 != 0 ERROR at chr 5 pos 3025, 1 != 0 ERROR at chr 5 pos 3028, 1 != 0 ERROR at chr 5 pos 3106, 1 != 0 ERROR at chr 5 pos 3138, 1 != 0 ERROR at chr 5 pos 3166, 1 != 0 ERROR at chr 5 pos 3178, 1 != 0 ERROR at chr 5 pos 3202, 1 != 0 ERROR at chr 5 pos 3233, 1 != 0 ERROR at chr 5 pos 3262, 1 != 0 ERROR at chr 5 pos 3344, 1 != 0 ERROR at chr 5 pos 3613, 1 != 0 ERROR at chr 5 pos 3676, 1 != 0 ERROR at chr 5 pos 3686, 1 != 0 ERROR at chr 5 pos 3706, 1 != 0 ERROR at chr 5 pos 3718, 1 != 0 ERROR at chr 5 pos 3830, 1 != 0 ERROR at chr 5 pos 3899, 1 != 0 ERROR at chr 5 pos 3912, 1 != 0 ERROR at chr 5 pos 3927, 1 != 0 ERROR at chr 5 pos 3928, 1 != 0 ERROR at chr 5 pos 4019, 1 != 0 ERROR at chr 5 pos 4046, 1 != 0 ERROR at chr 5 pos 4100, 1 != 0 ERROR at chr 5 pos 4105, 1 != 0 ERROR at chr 5 pos 4136, 1 != 0 ERROR at chr 5 pos 4310, 1 != 0 ERROR at chr 5 pos 4332, 1 != 0 ERROR at chr 5 pos 4376, 1 != 0 ERROR at chr 5 pos 4529, 1 != 0 ERROR at chr 5 pos 4542, 1 != 0 ERROR at chr 5 pos 4620, 1 != 0 ERROR at chr 5 pos 4808, 1 != 0 ERROR at chr 5 pos 4879, 1 != 0 ERROR at chr 5 pos 4890, 1 != 0 ERROR at chr 5 pos 4948, 1 != 0 ERROR at chr 5 pos 5083, 1 != 0 ERROR at chr 5 pos 5115, 1 != 0 ERROR at chr 5 pos 5148, 1 != 0 ERROR at chr 5 pos 5155, 1 != 0 ERROR at chr 5 pos 5157, 1 != 0 ERROR at chr 5 pos 5178, 1 != 0 ERROR at chr 5 pos 5280, 1 != 0 ERROR at chr 5 pos 5450, 1 != 0 ERROR at chr 5 pos 5472, 1 != 0 ERROR at chr 5 pos 5473, 1 != 0 ERROR at chr 5 pos 5514, 1 != 0 ERROR at chr 5 pos 5580, 1 != 0 ERROR at chr 5 pos 5704, 1 != 0 ERROR at chr 5 pos 5717, 1 != 0 ERROR at chr 5 pos 5722, 1 != 0 ERROR at chr 5 pos 5762, 1 != 0 ERROR at chr 5 pos 5934, 1 != 0 ERROR at chr 5 pos 6003, 1 != 0 ERROR at chr 5 pos 6044, 1 != 0 ERROR at chr 5 pos 6130, 1 != 0 ERROR at chr 5 pos 6140, 1 != 0 ERROR at chr 5 pos 6188, 1 != 0 ERROR at chr 5 pos 6298, 1 != 0 ERROR at chr 5 pos 6350, 1 != 0 ERROR at chr 5 pos 6474, 1 != 0 ERROR at chr 5 pos 6553, 1 != 0 ERROR at chr 5 pos 6583, 1 != 0 ERROR at chr 5 pos 6746, 1 != 0 ERROR at chr 5 pos 6939, 1 != 0 ERROR at chr 5 pos 7033, 1 != 0 ERROR at chr 5 pos 7059, 1 != 0 ERROR at chr 5 pos 7107, 1 != 0 ERROR at chr 5 pos 7144, 1 != 0 ERROR at chr 5 pos 7251, 1 != 0 ERROR at chr 5 pos 7422, 1 != 0 ERROR at chr 5 pos 7593, 1 != 0 ERROR at chr 5 pos 7758, 1 != 0 ERROR at chr 5 pos 7914, 1 != 0 ERROR at chr 5 pos 7969, 1 != 0 ERROR at chr 5 pos 7991, 1 != 0 ERROR at chr 5 pos 8039, 1 != 0 ERROR at chr 5 pos 8058, 1 != 0 ERROR at chr 5 pos 8090, 1 != 0 ERROR at chr 5 pos 8133, 1 != 0 ERROR at chr 5 pos 8312, 1 != 0 ERROR at chr 5 pos 8430, 1 != 0 ERROR at chr 5 pos 8474, 1 != 0 ERROR at chr 5 pos 8483, 1 != 0 ERROR at chr 5 pos 8520, 1 != 0 ERROR at chr 5 pos 8568, 1 != 0 ERROR at chr 5 pos 8600, 1 != 0 ERROR at chr 5 pos 8631, 1 != 0 ERROR at chr 5 pos 8663, 1 != 0 ERROR at chr 5 pos 8679, 1 != 0 ERROR at chr 5 pos 8838, 1 != 0 Test # 0 FAILED obj-*/graphconstructor/twopaco -f 20 -k 11 example/example.fa -o example/example.dbg Threads = 1 Vertex length = 11 Hash functions = 5 Filter size = 1048576 Capacity = 1 Files: example/example.fa -------------------------------------------------------------------------------- Round 0, 0:1048576 Pass Filling Filtering 1 0 1 2 0 0 True junctions count = 7 False junctions count = 0 Hash table size = 7 Candidate marks count = 16 -------------------------------------------------------------------------------- Reallocating bifurcations time: 0 True marks count: 16 Edges construction time: 0 -------------------------------------------------------------------------------- Distinct junctions = 7 TwoPaCo::buildGraphMain:: allocated with scalable_malloc; freeing. TwoPaCo::buildGraphMain:: Calling scalable_allocation_command(TBBMALLOC_CLEAN_ALL_BUFFERS, 0); obj-*/graphdump/graphdump -f dot example/example.dbg -k 11 > example/example.dot make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird verlassen create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedir=src dh_prep -O--sourcedir=src dh_auto_install --destdir=debian/twopaco/ -O--sourcedir=src cd obj-i686-linux-gnu && make -j15 install DESTDIR=/build/reproducible-path/twopaco-1.0.0\+dfsg/debian/twopaco AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten /usr/bin/cmake -S/build/reproducible-path/twopaco-1.0.0+dfsg/src -B/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird betreten make[2]: Für das Ziel „preinstall“ ist nichts zu tun. make[2]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /build/reproducible-path/twopaco-1.0.0+dfsg/debian/twopaco/usr/bin/graphdump -- Installing: /build/reproducible-path/twopaco-1.0.0+dfsg/debian/twopaco/usr/bin/twopaco make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu“ wird verlassen dh_installdocs -O--sourcedir=src dh_installchangelogs -O--sourcedir=src debian/rules override_dh_installexamples make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird betreten dh_installexamples --sourcedir=/build/reproducible-path/twopaco-1.0.0+dfsg make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird verlassen debian/rules override_dh_installman make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird betreten dh_installman --sourcedir=/build/reproducible-path/twopaco-1.0.0+dfsg make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird verlassen dh_installsystemduser -O--sourcedir=src dh_perl -O--sourcedir=src dh_link -O--sourcedir=src dh_strip_nondeterminism -O--sourcedir=src dh_compress -O--sourcedir=src dh_fixperms -O--sourcedir=src debian/rules override_dh_missing make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird betreten dh_missing --list-missing dh_missing: warning: CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: common/dnachar.cpp exists in src but is not installed to anywhere dh_missing: warning: common/dnachar.h exists in src but is not installed to anywhere dh_missing: warning: common/junctionapi.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/Makefile exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/README.md exists in src but is not installed to anywhere (related file: "/build/reproducible-path/twopaco-1.0.0+dfsg/example/README.md") dh_missing: warning: common/ngramhashing/characterhash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/cyclichash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example2.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example3.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example4.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example64bits.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/generalhash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/mersennetwister.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/rabinkarphash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/speedtesting.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/threewisehash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/unit.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/ztimer.h exists in src but is not installed to anywhere dh_missing: warning: common/spooky/SpookyV2.cpp exists in src but is not installed to anywhere dh_missing: warning: common/spooky/SpookyV2.h exists in src but is not installed to anywhere dh_missing: warning: common/streamfastaparser.cpp exists in src but is not installed to anywhere dh_missing: warning: common/streamfastaparser.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/assemblyedgeconstructor.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/assemblyedgeconstructor.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/bifurcationstorage.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/candidateoccurence.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/common.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/common.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/compressedstring.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/compressedstring.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/concurrentbitvector.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/concurrentbitvector.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/constructor.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/test.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/test.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexenumerator.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexenumerator.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexrollinghash.h exists in src but is not installed to anywhere dh_missing: warning: graphdump/CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: graphdump/glueGfa1.py exists in src but is not installed to anywhere dh_missing: warning: graphdump/glueGfa2.py exists in src but is not installed to anywhere dh_missing: warning: graphdump/graphdump.cpp exists in src but is not installed to anywhere dh_missing: warning: naiveconstructor/naiveconstructor.cpp exists in src but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * /build/reproducible-path/twopaco-1.0.0+dfsg/example/README.md with: * common/ngramhashing/README.md in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_installdocs: twopaco (0) * dh_installexamples: twopaco (10) * dh_installman: twopaco (2) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Verzeichnis „/build/reproducible-path/twopaco-1.0.0+dfsg“ wird verlassen dh_dwz -a -O--sourcedir=src dh_strip -a -O--sourcedir=src dh_makeshlibs -a -O--sourcedir=src dh_shlibdeps -a -O--sourcedir=src dh_installdeb -O--sourcedir=src dh_gencontrol -O--sourcedir=src dh_md5sums -O--sourcedir=src dh_builddeb -O--sourcedir=src dpkg-deb: Paket »twopaco-dbgsym« wird in »../twopaco-dbgsym_1.0.0+dfsg-1_i386.deb« gebaut. dpkg-deb: Paket »twopaco« wird in »../twopaco_1.0.0+dfsg-1_i386.deb« gebaut. dpkg-genbuildinfo --build=binary -O../twopaco_1.0.0+dfsg-1_i386.buildinfo dpkg-genchanges --build=binary -O../twopaco_1.0.0+dfsg-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/10707/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/10707/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/10707 and its subdirectories I: Current time: Tue Feb 18 23:10:30 +14 2025 I: pbuilder-time-stamp: 1739869830