I: pbuilder: network access will be disabled during build
I: Current time: Tue Jul 16 17:57:48 +14 2024
I: pbuilder-time-stamp: 1721102268
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
/usr/bin/tar: ./build: time stamp 2025-08-15 13:09:47 is 34110718.033152561 s in the future
/usr/bin/tar: ./dev/null: time stamp 2025-08-15 13:09:27 is 34110698.032979379 s in the future
/usr/bin/tar: ./dev/pts: time stamp 2025-08-15 13:09:27 is 34110698.032887857 s in the future
/usr/bin/tar: ./dev/full: time stamp 2025-08-15 13:09:27 is 34110698.032825342 s in the future
/usr/bin/tar: ./dev/tty: time stamp 2025-08-15 13:09:27 is 34110698.03276866 s in the future
/usr/bin/tar: ./dev/zero: time stamp 2025-08-15 13:09:27 is 34110698.032701888 s in the future
/usr/bin/tar: ./dev/console: time stamp 2025-08-15 13:09:27 is 34110698.032544621 s in the future
/usr/bin/tar: ./dev/urandom: time stamp 2025-08-15 13:09:27 is 34110698.032461692 s in the future
/usr/bin/tar: ./dev/random: time stamp 2025-08-15 13:09:27 is 34110698.03240423 s in the future
/usr/bin/tar: ./dev/ptmx: time stamp 2025-08-15 13:09:27 is 34110698.032297376 s in the future
/usr/bin/tar: ./etc/shells: time stamp 2025-08-15 13:09:37 is 34110708.032178268 s in the future
/usr/bin/tar: ./etc/init.d: time stamp 2025-08-15 13:09:37 is 34110708.031987104 s in the future
/usr/bin/tar: ./etc/gshadow: time stamp 2025-08-15 13:09:38 is 34110709.031816424 s in the future
/usr/bin/tar: ./etc/shadow: time stamp 2025-08-15 13:09:38 is 34110709.031772713 s in the future
/usr/bin/tar: ./etc/subuid: time stamp 2025-08-15 13:09:39 is 34110710.031650313 s in the future
/usr/bin/tar: ./etc/perl/Net: time stamp 2025-08-15 13:09:39 is 34110710.031460582 s in the future
/usr/bin/tar: ./etc/group: time stamp 2025-08-15 13:09:38 is 34110709.031386195 s in the future
/usr/bin/tar: ./etc/pam.d/common-session-noninteractive: time stamp 2025-08-15 13:09:39 is 34110710.031054787 s in the future
/usr/bin/tar: ./etc/pam.d/common-account: time stamp 2025-08-15 13:09:39 is 34110710.030848517 s in the future
/usr/bin/tar: ./etc/pam.d/common-session: time stamp 2025-08-15 13:09:39 is 34110710.030737854 s in the future
/usr/bin/tar: ./etc/pam.d/common-password: time stamp 2025-08-15 13:09:39 is 34110710.030675351 s in the future
/usr/bin/tar: ./etc/pam.d/common-auth: time stamp 2025-08-15 13:09:39 is 34110710.030502017 s in the future
/usr/bin/tar: ./etc/pam.d: time stamp 2025-08-15 13:09:39 is 34110710.030470484 s in the future
/usr/bin/tar: ./etc/cron.d: time stamp 2025-08-15 13:09:37 is 34110708.0303105 s in the future
/usr/bin/tar: ./etc/fstab: time stamp 2025-08-15 13:09:27 is 34110698.030082649 s in the future
/usr/bin/tar: ./etc/group-: time stamp 2025-08-15 13:09:27 is 34110698.029938515 s in the future
/usr/bin/tar: ./etc/security/opasswd: time stamp 2025-08-15 13:09:38 is 34110709.029394553 s in the future
/usr/bin/tar: ./etc/security: time stamp 2025-08-15 13:09:38 is 34110709.029170857 s in the future
/usr/bin/tar: ./etc/update-motd.d: time stamp 2025-08-15 13:09:37 is 34110708.028859532 s in the future
/usr/bin/tar: ./etc/subgid: time stamp 2025-08-15 13:09:39 is 34110710.028809296 s in the future
/usr/bin/tar: ./etc/default: time stamp 2025-08-15 13:09:38 is 34110709.028664401 s in the future
/usr/bin/tar: ./etc/passwd: time stamp 2025-08-15 13:09:38 is 34110709.028497155 s in the future
/usr/bin/tar: ./etc/gss: time stamp 2025-08-15 13:09:45 is 34110716.028352374 s in the future
/usr/bin/tar: ./etc/.pwd.lock: time stamp 2025-08-15 13:09:38 is 34110709.028293542 s in the future
/usr/bin/tar: ./etc/selinux: time stamp 2025-08-15 13:09:36 is 34110707.027964659 s in the future
/usr/bin/tar: ./etc/terminfo: time stamp 2025-08-15 13:09:37 is 34110708.027783514 s in the future
/usr/bin/tar: ./etc/unsupported-skip-usrmerge-conversion: time stamp 2025-08-15 13:09:22 is 34110693.027729332 s in the future
/usr/bin/tar: ./etc/ld.so.cache: time stamp 2025-08-15 13:09:52 is 34110723.02765774 s in the future
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/usr/bin/tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time stamp 2025-08-15 13:10:05 is 34110736.027292263 s in the future
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/usr/bin/tar: ./etc/dpkg: time stamp 2025-08-15 13:09:46 is 34110717.027190285 s in the future
/usr/bin/tar: ./etc/environment: time stamp 2025-08-15 13:09:38 is 34110709.027121412 s in the future
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/usr/bin/tar: ./etc/passwd-: time stamp 2025-08-15 13:09:27 is 34110698.026791111 s in the future
/usr/bin/tar: ./etc/ld.so.conf.d: time stamp 2025-08-15 13:09:52 is 34110723.026609932 s in the future
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/usr/bin/tar: ./etc/apt/apt.conf.d/80proxy: time stamp 2025-08-15 13:10:05 is 34110736.025138671 s in the future
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/usr/bin/tar: ./etc/apt/trusted.gpg.d: time stamp 2025-08-15 13:09:36 is 34110707.024633479 s in the future
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/usr/bin/tar: ./etc/logrotate.d: time stamp 2025-08-15 13:09:52 is 34110723.023719938 s in the future
/usr/bin/tar: ./lib/udev/rules.d: time stamp 2025-08-15 13:09:31 is 34110702.023489959 s in the future
/usr/bin/tar: ./lib/init: time stamp 2025-08-15 13:09:35 is 34110706.023296891 s in the future
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/usr/bin/tar: ./lib/systemd/system: time stamp 2025-08-15 13:09:36 is 34110706.916975428 s in the future
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/usr/bin/tar: ./usr/lib/locale/gv_GB.utf8: time stamp 2025-08-15 13:09:52 is 34110715.978690223 s in the future
/usr/bin/tar: ./usr/lib/locale/gl_ES.utf8: time stamp 2025-08-15 13:09:52 is 34110715.978656798 s in the future
/usr/bin/tar: ./usr/lib/locale/hu_HU: time stamp 2025-08-15 13:09:52 is 34110715.978622128 s in the future
/usr/bin/tar: ./usr/lib/locale/nb_NO.utf8: time stamp 2025-08-15 13:09:52 is 34110715.978586858 s in the future
/usr/bin/tar: ./usr/lib/locale/lv_LV.utf8: time stamp 2025-08-15 13:09:52 is 34110715.978552291 s in the future
/usr/bin/tar: ./usr/lib/locale/ln_CD: time stamp 2025-08-15 13:09:52 is 34110715.978517438 s in the future
/usr/bin/tar: ./usr/lib/locale/mfe_MU: time stamp 2025-08-15 13:09:52 is 34110715.9784828 s in the future
/usr/bin/tar: ./usr/lib/locale/es_CL.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.97844917 s in the future
/usr/bin/tar: ./usr/lib/locale/es_CL.utf8: time stamp 2025-08-15 13:09:52 is 34110715.97841579 s in the future
/usr/bin/tar: ./usr/lib/locale/ca_ES@euro/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.978381862 s in the future
/usr/bin/tar: ./usr/lib/locale/ca_ES@euro: time stamp 2025-08-15 13:09:52 is 34110715.978348643 s in the future
/usr/bin/tar: ./usr/lib/locale/tl_PH: time stamp 2025-08-15 13:09:52 is 34110715.978315043 s in the future
/usr/bin/tar: ./usr/lib/locale/en_ZW/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.978280806 s in the future
/usr/bin/tar: ./usr/lib/locale/en_ZW: time stamp 2025-08-15 13:09:52 is 34110715.978247262 s in the future
/usr/bin/tar: ./usr/lib/locale/en_SG.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.978212691 s in the future
/usr/bin/tar: ./usr/lib/locale/en_SG.utf8: time stamp 2025-08-15 13:09:52 is 34110715.978179011 s in the future
/usr/bin/tar: ./usr/lib/locale/tk_TM: time stamp 2025-08-15 13:09:52 is 34110715.978144814 s in the future
/usr/bin/tar: ./usr/lib/locale/hne_IN: time stamp 2025-08-15 13:09:52 is 34110715.978109761 s in the future
/usr/bin/tar: ./usr/lib/locale/kl_GL.utf8: time stamp 2025-08-15 13:09:52 is 34110715.978076406 s in the future
/usr/bin/tar: ./usr/lib/locale/yue_HK: time stamp 2025-08-15 13:09:52 is 34110715.97804688 s in the future
/usr/bin/tar: ./usr/lib/locale/fi_FI.utf8: time stamp 2025-08-15 13:09:52 is 34110715.97801161 s in the future
/usr/bin/tar: ./usr/lib/locale/so_SO.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977975678 s in the future
/usr/bin/tar: ./usr/lib/locale/so_SO.utf8: time stamp 2025-08-15 13:09:52 is 34110715.97794267 s in the future
/usr/bin/tar: ./usr/lib/locale/nr_ZA/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977907587 s in the future
/usr/bin/tar: ./usr/lib/locale/nr_ZA: time stamp 2025-08-15 13:09:52 is 34110715.97787372 s in the future
/usr/bin/tar: ./usr/lib/locale/de_DE.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977839555 s in the future
/usr/bin/tar: ./usr/lib/locale/de_DE.utf8: time stamp 2025-08-15 13:09:52 is 34110715.97780544 s in the future
/usr/bin/tar: ./usr/lib/locale/gez_ET@abegede/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.97777281 s in the future
/usr/bin/tar: ./usr/lib/locale/gez_ET@abegede: time stamp 2025-08-15 13:09:52 is 34110715.977739089 s in the future
/usr/bin/tar: ./usr/lib/locale/cv_RU/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977704284 s in the future
/usr/bin/tar: ./usr/lib/locale/cv_RU: time stamp 2025-08-15 13:09:52 is 34110715.97767029 s in the future
/usr/bin/tar: ./usr/lib/locale/gez_ER/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977636814 s in the future
/usr/bin/tar: ./usr/lib/locale/gez_ER: time stamp 2025-08-15 13:09:52 is 34110715.97760319 s in the future
/usr/bin/tar: ./usr/lib/locale/hy_AM: time stamp 2025-08-15 13:09:52 is 34110715.97756852 s in the future
/usr/bin/tar: ./usr/lib/locale/zu_ZA.utf8: time stamp 2025-08-15 13:09:52 is 34110715.977534174 s in the future
/usr/bin/tar: ./usr/lib/locale/dsb_DE: time stamp 2025-08-15 13:09:52 is 34110715.977500052 s in the future
/usr/bin/tar: ./usr/lib/locale/ca_ES: time stamp 2025-08-15 13:09:52 is 34110715.977465814 s in the future
/usr/bin/tar: ./usr/lib/locale/zh_CN.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977432454 s in the future
/usr/bin/tar: ./usr/lib/locale/zh_CN.utf8: time stamp 2025-08-15 13:09:52 is 34110715.977397984 s in the future
/usr/bin/tar: ./usr/lib/locale/lg_UG.utf8: time stamp 2025-08-15 13:09:52 is 34110715.977364114 s in the future
/usr/bin/tar: ./usr/lib/locale/ps_AF: time stamp 2025-08-15 13:09:52 is 34110715.977333756 s in the future
/usr/bin/tar: ./usr/lib/locale/crh_UA: time stamp 2025-08-15 13:09:52 is 34110715.977300666 s in the future
/usr/bin/tar: ./usr/lib/locale/it_CH.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.97726608 s in the future
/usr/bin/tar: ./usr/lib/locale/it_CH.utf8: time stamp 2025-08-15 13:09:52 is 34110715.977233555 s in the future
/usr/bin/tar: ./usr/lib/locale/de_AT: time stamp 2025-08-15 13:09:52 is 34110715.977199282 s in the future
/usr/bin/tar: ./usr/lib/locale/ta_IN: time stamp 2025-08-15 13:09:52 is 34110715.977164974 s in the future
/usr/bin/tar: ./usr/lib/locale/es_GT/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.977132305 s in the future
/usr/bin/tar: ./usr/lib/locale/es_GT: time stamp 2025-08-15 13:09:52 is 34110715.977098627 s in the future
/usr/bin/tar: ./usr/lib/locale/om_ET: time stamp 2025-08-15 13:09:52 is 34110715.977063903 s in the future
/usr/bin/tar: ./usr/lib/locale/niu_NU: time stamp 2025-08-15 13:09:52 is 34110715.97703082 s in the future
/usr/bin/tar: ./usr/lib/locale/ca_FR/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.976997273 s in the future
/usr/bin/tar: ./usr/lib/locale/ca_FR: time stamp 2025-08-15 13:09:52 is 34110715.976964688 s in the future
/usr/bin/tar: ./usr/lib/locale/es_BO.utf8/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.976930953 s in the future
/usr/bin/tar: ./usr/lib/locale/es_BO.utf8: time stamp 2025-08-15 13:09:52 is 34110715.976898264 s in the future
/usr/bin/tar: ./usr/lib/locale/ber_MA: time stamp 2025-08-15 13:09:52 is 34110715.976863389 s in the future
/usr/bin/tar: ./usr/lib/locale/es_ES/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.976828855 s in the future
/usr/bin/tar: ./usr/lib/locale/es_ES: time stamp 2025-08-15 13:09:52 is 34110715.976795487 s in the future
/usr/bin/tar: ./usr/lib/locale/de_BE/LC_MESSAGES: time stamp 2025-08-15 13:09:52 is 34110715.976763661 s in the future
/usr/bin/tar: ./usr/lib/locale/de_BE: time stamp 2025-08-15 13:09:52 is 34110715.976727443 s in the future
/usr/bin/tar: ./usr/lib/locale/sgs_LT: time stamp 2025-08-15 13:09:52 is 34110715.976694021 s in the future
/usr/bin/tar: ./usr/lib/locale/fi_FI: time stamp 2025-08-15 13:09:52 is 34110715.97665947 s in the future
/usr/bin/tar: ./usr/lib/locale/gl_ES: time stamp 2025-08-15 13:09:52 is 34110715.976627186 s in the future
/usr/bin/tar: ./usr/lib/locale: time stamp 2025-08-15 13:09:52 is 34110715.976592526 s in the future
/usr/bin/tar: ./usr/lib/bfd-plugins: time stamp 2025-08-15 13:09:45 is 34110708.976558728 s in the future
/usr/bin/tar: ./usr/lib/apt/planners: time stamp 2025-08-15 13:09:29 is 34110692.976525337 s in the future
/usr/bin/tar: ./usr/lib/apt: time stamp 2025-08-15 13:09:29 is 34110692.976491412 s in the future
/usr/bin/tar: ./usr/lib/i386-linux-gnu/perl/cross-config-5.36.0: time stamp 2025-08-15 13:09:34 is 34110697.976455241 s in the future
/usr/bin/tar: ./usr/lib/i386-linux-gnu/perl: time stamp 2025-08-15 13:09:26 is 34110689.97642147 s in the future
/usr/bin/tar: ./usr/lib/i386-linux-gnu: time stamp 2025-08-15 13:09:50 is 34110713.97638683 s in the future
/usr/bin/tar: ./usr/lib/compat-ld: time stamp 2025-08-15 13:09:40 is 34110703.976352865 s in the future
/usr/bin/tar: ./usr/lib/gcc/i686-linux-gnu/12: time stamp 2025-08-15 13:09:44 is 34110707.976318691 s in the future
/usr/bin/tar: ./usr/lib/gcc/i686-linux-gnu: time stamp 2025-08-15 13:09:41 is 34110704.976284046 s in the future
/usr/bin/tar: ./usr/lib/gcc: time stamp 2025-08-15 13:09:41 is 34110704.976251723 s in the future
/usr/bin/tar: ./usr/lib/gold-ld: time stamp 2025-08-15 13:09:40 is 34110703.976217707 s in the future
/usr/bin/tar: ./usr/lib: time stamp 2025-08-15 13:09:45 is 34110708.976185067 s in the future
/usr/bin/tar: ./usr/bin: time stamp 2025-08-15 13:09:52 is 34110715.976153651 s in the future
/usr/bin/tar: ./usr: time stamp 2025-08-15 13:09:27 is 34110690.976120825 s in the future
/usr/bin/tar: ./lib: time stamp 2025-08-15 13:09:46 is 34110709.976066481 s in the future
/usr/bin/tar: ./etc/rc6.d: time stamp 2025-08-15 13:09:37 is 34110700.976031883 s in the future
/usr/bin/tar: ./etc/systemd/system/multi-user.target.wants: time stamp 2025-08-15 13:09:38 is 34110701.975997995 s in the future
/usr/bin/tar: ./etc/systemd/system/timers.target.wants: time stamp 2025-08-15 13:09:39 is 34110702.975963633 s in the future
/usr/bin/tar: ./etc/systemd/system: time stamp 2025-08-15 13:09:38 is 34110701.975931368 s in the future
/usr/bin/tar: ./etc/rcS.d: time stamp 2025-08-15 13:09:37 is 34110700.975876672 s in the future
/usr/bin/tar: ./etc/alternatives: time stamp 2025-08-15 13:09:52 is 34110715.975842015 s in the future
/usr/bin/tar: ./etc/rc0.d: time stamp 2025-08-15 13:09:37 is 34110700.975808462 s in the future
/usr/bin/tar: ./bin: time stamp 2025-08-15 13:09:50 is 34110713.97572881 s in the future
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [r-cran-wgcna_1.72-1-1.dsc]
I: copying [./r-cran-wgcna_1.72-1.orig.tar.gz]
I: copying [./r-cran-wgcna_1.72-1-1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sun Jan 22 06:39:44 2023 +14
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./r-cran-wgcna_1.72-1-1.dsc: no acceptable signature found
dpkg-source: info: extracting r-cran-wgcna in r-cran-wgcna-1.72-1
dpkg-source: info: unpacking r-cran-wgcna_1.72-1.orig.tar.gz
dpkg-source: info: unpacking r-cran-wgcna_1.72-1-1.debian.tar.xz
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/D01_modify_environment starting
debug: Running on ionos16-i386.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 Jul 16 17:57 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu")
  BASH_VERSION='5.2.15(1)-release'
  BUILDDIR=/build
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=i386
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 '
  DIRSTACK=()
  DISTRIBUTION=bookworm
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=i686
  HOST_ARCH=i386
  IFS=' 	
  '
  INVOCATION_ID=a34f5dec287e4e47b8ecea7e61f40cf6
  LANG=C
  LANGUAGE=de_CH:de
  LC_ALL=C
  LD_LIBRARY_PATH=/usr/lib/libeatmydata
  LD_PRELOAD=libeatmydata.so
  MACHTYPE=i686-pc-linux-gnu
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnu
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=106440
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6gu4ZY5F/pbuilderrc_dTF1 --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6gu4ZY5F/b2 --logfile b2/build.log --extrapackages usrmerge r-cran-wgcna_1.72-1-1.dsc'
  SUDO_GID=112
  SUDO_UID=107
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://85.184.249.68:3128
I: uname -a
  Linux i-capture-the-hostname 6.1.0-9-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) x86_64 GNU/Linux
I: ls -l /bin
  total 6036
  -rwxr-xr-x 1 root root 1408088 Apr 24  2023 bash
  -rwxr-xr-x 3 root root   38404 Sep 19  2022 bunzip2
  -rwxr-xr-x 3 root root   38404 Sep 19  2022 bzcat
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzcmp -> bzdiff
  -rwxr-xr-x 1 root root    2225 Sep 19  2022 bzdiff
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzegrep -> bzgrep
  -rwxr-xr-x 1 root root    4893 Nov 28  2021 bzexe
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzfgrep -> bzgrep
  -rwxr-xr-x 1 root root    3775 Sep 19  2022 bzgrep
  -rwxr-xr-x 3 root root   38404 Sep 19  2022 bzip2
  -rwxr-xr-x 1 root root   17892 Sep 19  2022 bzip2recover
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzless -> bzmore
  -rwxr-xr-x 1 root root    1297 Sep 19  2022 bzmore
  -rwxr-xr-x 1 root root   42920 Sep 21  2022 cat
  -rwxr-xr-x 1 root root   79816 Sep 21  2022 chgrp
  -rwxr-xr-x 1 root root   67496 Sep 21  2022 chmod
  -rwxr-xr-x 1 root root   79816 Sep 21  2022 chown
  -rwxr-xr-x 1 root root  162024 Sep 21  2022 cp
  -rwxr-xr-x 1 root root  136916 Jan  6  2023 dash
  -rwxr-xr-x 1 root root  137160 Sep 21  2022 date
  -rwxr-xr-x 1 root root  100364 Sep 21  2022 dd
  -rwxr-xr-x 1 root root  108940 Sep 21  2022 df
  -rwxr-xr-x 1 root root  162152 Sep 21  2022 dir
  -rwxr-xr-x 1 root root   87760 Mar 24  2023 dmesg
  lrwxrwxrwx 1 root root       8 Dec 20  2022 dnsdomainname -> hostname
  lrwxrwxrwx 1 root root       8 Dec 20  2022 domainname -> hostname
  -rwxr-xr-x 1 root root   38760 Sep 21  2022 echo
  -rwxr-xr-x 1 root root      41 Jan 25  2023 egrep
  -rwxr-xr-x 1 root root   34664 Sep 21  2022 false
  -rwxr-xr-x 1 root root      41 Jan 25  2023 fgrep
  -rwxr-xr-x 1 root root   84272 Mar 24  2023 findmnt
  -rwsr-xr-x 1 root root   30240 Mar 23  2023 fusermount
  -rwxr-xr-x 1 root root  218680 Jan 25  2023 grep
  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
  -rwxr-xr-x 1 root root  100952 Apr 10  2022 gzip
  -rwxr-xr-x 1 root root   21916 Dec 20  2022 hostname
  -rwxr-xr-x 1 root root   75756 Sep 21  2022 ln
  -rwxr-xr-x 1 root root   55600 Mar 24  2023 login
  -rwxr-xr-x 1 root root  162152 Sep 21  2022 ls
  -rwxr-xr-x 1 root root  214568 Mar 24  2023 lsblk
  -rwxr-xr-x 1 root root   96328 Sep 21  2022 mkdir
  -rwxr-xr-x 1 root root   84008 Sep 21  2022 mknod
  -rwxr-xr-x 1 root root   38792 Sep 21  2022 mktemp
  -rwxr-xr-x 1 root root   63016 Mar 24  2023 more
  -rwsr-xr-x 1 root root   58912 Mar 24  2023 mount
  -rwxr-xr-x 1 root root   13856 Mar 24  2023 mountpoint
  -rwxr-xr-x 1 root root  157932 Sep 21  2022 mv
  lrwxrwxrwx 1 root root       8 Dec 20  2022 nisdomainname -> hostname
  lrwxrwxrwx 1 root root      14 Apr  3  2023 pidof -> /sbin/killall5
  -rwxr-xr-x 1 root root   38792 Sep 21  2022 pwd
  lrwxrwxrwx 1 root root       4 Apr 24  2023 rbash -> bash
  -rwxr-xr-x 1 root root   51080 Sep 21  2022 readlink
  -rwxr-xr-x 1 root root   75720 Sep 21  2022 rm
  -rwxr-xr-x 1 root root   51080 Sep 21  2022 rmdir
  -rwxr-xr-x 1 root root   22308 Nov  3  2022 run-parts
  -rwxr-xr-x 1 root root  133224 Jan  6  2023 sed
  lrwxrwxrwx 1 root root       9 Jul 16 17:57 sh -> /bin/bash
  -rwxr-xr-x 1 root root   38760 Sep 21  2022 sleep
  -rwxr-xr-x 1 root root   87976 Sep 21  2022 stty
  -rwsr-xr-x 1 root root   83492 Mar 24  2023 su
  -rwxr-xr-x 1 root root   38792 Sep 21  2022 sync
  -rwxr-xr-x 1 root root  598456 Apr  7  2023 tar
  -rwxr-xr-x 1 root root   13860 Nov  3  2022 tempfile
  -rwxr-xr-x 1 root root  120776 Sep 21  2022 touch
  -rwxr-xr-x 1 root root   34664 Sep 21  2022 true
  -rwxr-xr-x 1 root root   17892 Mar 23  2023 ulockmgr_server
  -rwsr-xr-x 1 root root   30236 Mar 24  2023 umount
  -rwxr-xr-x 1 root root   38760 Sep 21  2022 uname
  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
  -rwxr-xr-x 1 root root  162152 Sep 21  2022 vdir
  -rwxr-xr-x 1 root root   71216 Mar 24  2023 wdctl
  lrwxrwxrwx 1 root root       8 Dec 20  2022 ypdomainname -> hostname
  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
  -rwxr-xr-x 1 root root    6460 Apr 10  2022 zdiff
  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
  -rwxr-xr-x 1 root root    8103 Apr 10  2022 zgrep
  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-dynamictreecut, r-cran-fastcluster, r-cran-matrixstats, r-cran-hmisc, r-bioc-impute, r-cran-foreach, r-cran-doparallel, r-bioc-preprocesscore, r-cran-survival, r-bioc-go.db, r-bioc-annotationdbi, r-cran-rcpp
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19599 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-r; however:
  Package dh-r is not installed.
 pbuilder-satisfydepends-dummy depends on r-base-dev; however:
  Package r-base-dev is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-dynamictreecut; however:
  Package r-cran-dynamictreecut is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-fastcluster; however:
  Package r-cran-fastcluster is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-matrixstats; however:
  Package r-cran-matrixstats is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-hmisc; however:
  Package r-cran-hmisc is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-impute; however:
  Package r-bioc-impute is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-foreach; however:
  Package r-cran-foreach is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-doparallel; however:
  Package r-cran-doparallel is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-preprocesscore; however:
  Package r-bioc-preprocesscore is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-survival; however:
  Package r-cran-survival is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-go.db; however:
  Package r-bioc-go.db is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-annotationdbi; however:
  Package r-bioc-annotationdbi is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-rcpp; however:
  Package r-cran-rcpp is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} icu-devtools{a} intltool-debian{a} javascript-common{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcurl3-gnutls{a} libcurl4{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-12-dev{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-bootstrap{a} libjs-bootstrap4{a} libjs-d3{a} libjs-es5-shim{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-jquery-selectize.js{a} libjs-jquery-ui{a} libjs-json{a} libjs-mathjax{a} libjs-microplugin.js{a} libjs-modernizr{a} libjs-popper.js{a} libjs-prettify{a} libjs-sifter.js{a} libjs-twitter-bootstrap-datepicker{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblua5.3-0{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnghttp2-14{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpcre3{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libreadline-dev{a} libreadline8{a} libregexp-ipv6-perl{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsm6{a} libssh2-1{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6{a} libyaml-0-2{a} littler{a} m4{a} man-db{a} node-bootstrap-sass{a} node-html5shiv{a} node-normalize.css{a} openssl{a} pandoc{a} pandoc-data{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-biobase{a} r-bioc-biocgenerics{a} r-bioc-biostrings{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-go.db{a} r-bioc-impute{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-preprocesscore{a} r-bioc-s4vectors{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-acepack{a} r-cran-askpass{a} r-cran-backports{a} r-cran-base64enc{a} r-cran-bit{a} r-cran-bit64{a} r-cran-bitops{a} r-cran-blob{a} r-cran-bslib{a} r-cran-cachem{a} r-cran-checkmate{a} r-cran-chron{a} r-cran-cli{a} r-cran-cluster{a} r-cran-codetools{a} r-cran-colorspace{a} r-cran-commonmark{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-data.table{a} r-cran-dbi{a} r-cran-deldir{a} r-cran-digest{a} r-cran-doparallel{a} r-cran-dplyr{a} r-cran-dynamictreecut{a} r-cran-ellipsis{a} r-cran-evaluate{a} r-cran-fansi{a} r-cran-farver{a} r-cran-fastcluster{a} r-cran-fastmap{a} r-cran-fontawesome{a} r-cran-foreach{a} r-cran-foreign{a} r-cran-formula{a} r-cran-fs{a} r-cran-generics{a} r-cran-ggplot2{a} r-cran-glue{a} r-cran-gridextra{a} r-cran-gtable{a} r-cran-highr{a} r-cran-hmisc{a} r-cran-htmltable{a} r-cran-htmltools{a} r-cran-htmlwidgets{a} r-cran-httpuv{a} r-cran-httr{a} r-cran-interp{a} r-cran-isoband{a} r-cran-iterators{a} r-cran-jpeg{a} r-cran-jquerylib{a} r-cran-jsonlite{a} r-cran-knitr{a} r-cran-labeling{a} r-cran-later{a} r-cran-lattice{a} r-cran-latticeextra{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-memoise{a} r-cran-mgcv{a} r-cran-mime{a} r-cran-munsell{a} r-cran-nlme{a} r-cran-nnet{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-promises{a} r-cran-purrr{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppeigen{a} r-cran-rcurl{a} r-cran-rlang{a} r-cran-rmarkdown{a} r-cran-rpart{a} r-cran-rsqlite{a} r-cran-rstudioapi{a} r-cran-sass{a} r-cran-scales{a} r-cran-shiny{a} r-cran-sourcetools{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-survival{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-tinytex{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-viridis{a} r-cran-viridislite{a} r-cran-withr{a} r-cran-xfun{a} r-cran-xtable{a} r-cran-yaml{a} readline-common{a} sensible-utils{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bzip2-doc cme curl devscripts git-buildpackage libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx node-highlight.js node-jquery publicsuffix r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-caret r-cran-covr r-cran-dbitest r-cran-dbplyr r-cran-decor r-cran-dygraphs r-cran-fastmatch r-cran-formattable r-cran-future r-cran-hexbin r-cran-hms r-cran-lobstr r-cran-lubridate r-cran-mapproj r-cran-maps r-cran-maptools r-cran-markdown r-cran-mlbench r-cran-mockery r-cran-mockr r-cran-multcomp r-cran-pkgload r-cran-progress r-cran-quantreg r-cran-ragg r-cran-rmysql r-cran-rpostgresql r-cran-rsconnect r-cran-rsvg r-cran-runit r-cran-sf r-cran-sodium r-cran-sp r-cran-svglite r-cran-testit r-cran-testthat r-cran-thematic r-cran-tikzdevice r-cran-tufte r-cran-vdiffr r-cran-waldo r-cran-webutils r-cran-xml2 r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 
0 packages upgraded, 333 newly installed, 0 to remove and 0 not upgraded.
Need to get 277 MB of archives. After unpacking 908 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main i386 readline-common all 8.2-1.3 [69.0 kB]
Get: 2 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 3 http://deb.debian.org/debian bookworm/main i386 openssl i386 3.0.9-1 [1420 kB]
Get: 4 http://deb.debian.org/debian bookworm/main i386 ca-certificates all 20230311 [153 kB]
Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB]
Get: 6 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB]
Get: 7 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB]
Get: 8 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB]
Get: 9 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB]
Get: 10 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB]
Get: 11 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB]
Get: 12 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB]
Get: 13 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB]
Get: 14 http://deb.debian.org/debian bookworm/main i386 ucf all 3.0043+nmu1 [55.2 kB]
Get: 15 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB]
Get: 16 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB]
Get: 17 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB]
Get: 18 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB]
Get: 19 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB]
Get: 20 http://deb.debian.org/debian bookworm/main i386 dctrl-tools i386 2.24-3 [105 kB]
Get: 21 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 22 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB]
Get: 23 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 24 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 25 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B]
Get: 26 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 27 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 28 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB]
Get: 29 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB]
Get: 30 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB]
Get: 31 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB]
Get: 32 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB]
Get: 33 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 34 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 35 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB]
Get: 36 http://deb.debian.org/debian bookworm/main i386 zip i386 3.0-13 [236 kB]
Get: 37 http://deb.debian.org/debian bookworm/main i386 unzip i386 6.0-28 [166 kB]
Get: 38 http://deb.debian.org/debian bookworm/main i386 libpaper1 i386 1.1.29 [12.7 kB]
Get: 39 http://deb.debian.org/debian bookworm/main i386 libpaper-utils i386 1.1.29 [8972 B]
Get: 40 http://deb.debian.org/debian bookworm/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB]
Get: 41 http://deb.debian.org/debian bookworm/main i386 libblas3 i386 3.11.0-2 [139 kB]
Get: 42 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB]
Get: 43 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB]
Get: 44 http://deb.debian.org/debian bookworm/main i386 libpng16-16 i386 1.6.39-2 [283 kB]
Get: 45 http://deb.debian.org/debian bookworm/main i386 libfreetype6 i386 2.12.1+dfsg-5 [410 kB]
Get: 46 http://deb.debian.org/debian bookworm/main i386 fonts-dejavu-core all 2.37-6 [1068 kB]
Get: 47 http://deb.debian.org/debian bookworm/main i386 fontconfig-config i386 2.14.1-4 [315 kB]
Get: 48 http://deb.debian.org/debian bookworm/main i386 libfontconfig1 i386 2.14.1-4 [398 kB]
Get: 49 http://deb.debian.org/debian bookworm/main i386 libpixman-1-0 i386 0.42.2-1 [548 kB]
Get: 50 http://deb.debian.org/debian bookworm/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB]
Get: 51 http://deb.debian.org/debian bookworm/main i386 libbsd0 i386 0.11.7-2 [121 kB]
Get: 52 http://deb.debian.org/debian bookworm/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB]
Get: 53 http://deb.debian.org/debian bookworm/main i386 libxcb1 i386 1.15-1 [148 kB]
Get: 54 http://deb.debian.org/debian bookworm/main i386 libx11-data all 2:1.8.4-2 [292 kB]
Get: 55 http://deb.debian.org/debian bookworm/main i386 libx11-6 i386 2:1.8.4-2 [782 kB]
Get: 56 http://deb.debian.org/debian bookworm/main i386 libxcb-render0 i386 1.15-1 [116 kB]
Get: 57 http://deb.debian.org/debian bookworm/main i386 libxcb-shm0 i386 1.15-1 [106 kB]
Get: 58 http://deb.debian.org/debian bookworm/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB]
Get: 59 http://deb.debian.org/debian bookworm/main i386 libxrender1 i386 1:0.9.10-1.1 [34.1 kB]
Get: 60 http://deb.debian.org/debian bookworm/main i386 libcairo2 i386 1.16.0-7 [627 kB]
Get: 61 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB]
Get: 62 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB]
Get: 63 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB]
Get: 64 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB]
Get: 65 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB]
Get: 66 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB]
Get: 67 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB]
Get: 68 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-10 [420 kB]
Get: 69 http://deb.debian.org/debian bookworm/main i386 libglib2.0-0 i386 2.74.6-2 [1467 kB]
Get: 70 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo i386 1:2.1.5-2 [169 kB]
Get: 71 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB]
Get: 72 http://deb.debian.org/debian bookworm/main i386 liblapack3 i386 3.11.0-2 [2092 kB]
Get: 73 http://deb.debian.org/debian bookworm/main i386 fontconfig i386 2.14.1-4 [450 kB]
Get: 74 http://deb.debian.org/debian bookworm/main i386 libfribidi0 i386 1.0.8-2.1 [65.6 kB]
Get: 75 http://deb.debian.org/debian bookworm/main i386 libgraphite2-3 i386 1.3.14-1 [84.0 kB]
Get: 76 http://deb.debian.org/debian bookworm/main i386 libharfbuzz0b i386 6.0.0+dfsg-3 [1966 kB]
Get: 77 http://deb.debian.org/debian bookworm/main i386 libthai-data all 0.1.29-1 [176 kB]
Get: 78 http://deb.debian.org/debian bookworm/main i386 libdatrie1 i386 0.2.13-2+b1 [45.0 kB]
Get: 79 http://deb.debian.org/debian bookworm/main i386 libthai0 i386 0.1.29-1 [58.6 kB]
Get: 80 http://deb.debian.org/debian bookworm/main i386 libpango-1.0-0 i386 1.50.12+ds-1 [220 kB]
Get: 81 http://deb.debian.org/debian bookworm/main i386 libpangoft2-1.0-0 i386 1.50.12+ds-1 [50.5 kB]
Get: 82 http://deb.debian.org/debian bookworm/main i386 libpangocairo-1.0-0 i386 1.50.12+ds-1 [35.4 kB]
Get: 83 http://deb.debian.org/debian bookworm/main i386 libreadline8 i386 8.2-1.3 [171 kB]
Get: 84 http://deb.debian.org/debian bookworm/main i386 libtcl8.6 i386 8.6.13+dfsg-2 [1095 kB]
Get: 85 http://deb.debian.org/debian bookworm/main i386 libdeflate0 i386 1.14-1 [57.5 kB]
Get: 86 http://deb.debian.org/debian bookworm/main i386 libjbig0 i386 2.1-6.1 [31.6 kB]
Get: 87 http://deb.debian.org/debian bookworm/main i386 liblerc4 i386 4.0.0+ds-2 [181 kB]
Get: 88 http://deb.debian.org/debian bookworm/main i386 libwebp7 i386 1.2.4-0.2 [293 kB]
Get: 89 http://deb.debian.org/debian bookworm/main i386 libtiff6 i386 4.5.0-6 [332 kB]
Get: 90 http://deb.debian.org/debian bookworm/main i386 libxft2 i386 2.3.6-1 [62.8 kB]
Get: 91 http://deb.debian.org/debian bookworm/main i386 x11-common all 1:7.7+23 [252 kB]
Get: 92 http://deb.debian.org/debian bookworm/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB]
Get: 93 http://deb.debian.org/debian bookworm/main i386 libtk8.6 i386 8.6.13-2 [824 kB]
Get: 94 http://deb.debian.org/debian bookworm/main i386 libice6 i386 2:1.0.10-1 [60.8 kB]
Get: 95 http://deb.debian.org/debian bookworm/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB]
Get: 96 http://deb.debian.org/debian bookworm/main i386 libxt6 i386 1:1.2.1-1.1 [192 kB]
Get: 97 http://deb.debian.org/debian bookworm/main i386 r-base-core i386 4.2.2.20221110-2 [26.1 MB]
Get: 98 http://deb.debian.org/debian bookworm/main i386 libgfortran-12-dev i386 12.2.0-14 [761 kB]
Get: 99 http://deb.debian.org/debian bookworm/main i386 gfortran-12 i386 12.2.0-14 [10.5 MB]
Get: 100 http://deb.debian.org/debian bookworm/main i386 gfortran i386 4:12.2.0-3 [1432 B]
Get: 101 http://deb.debian.org/debian bookworm/main i386 libblas-dev i386 3.11.0-2 [151 kB]
Get: 102 http://deb.debian.org/debian bookworm/main i386 liblapack-dev i386 3.11.0-2 [4187 kB]
Get: 103 http://deb.debian.org/debian bookworm/main i386 libncurses6 i386 6.4-4 [111 kB]
Get: 104 http://deb.debian.org/debian bookworm/main i386 libncurses-dev i386 6.4-4 [379 kB]
Get: 105 http://deb.debian.org/debian bookworm/main i386 libncurses5-dev i386 6.4-4 [932 B]
Get: 106 http://deb.debian.org/debian bookworm/main i386 libreadline-dev i386 8.2-1.3 [164 kB]
Get: 107 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo-dev i386 1:2.1.5-2 [304 kB]
Get: 108 http://deb.debian.org/debian bookworm/main i386 libjpeg-dev i386 1:2.1.5-2 [71.8 kB]
Get: 109 http://deb.debian.org/debian bookworm/main i386 libpcre2-16-0 i386 10.42-1 [243 kB]
Get: 110 http://deb.debian.org/debian bookworm/main i386 libpcre2-32-0 i386 10.42-1 [232 kB]
Get: 111 http://deb.debian.org/debian bookworm/main i386 libpcre2-posix3 i386 10.42-1 [55.4 kB]
Get: 112 http://deb.debian.org/debian bookworm/main i386 libpcre2-dev i386 10.42-1 [761 kB]
Get: 113 http://deb.debian.org/debian bookworm/main i386 libpcre3 i386 2:8.39-15 [340 kB]
Get: 114 http://deb.debian.org/debian bookworm/main i386 libpcre16-3 i386 2:8.39-15 [258 kB]
Get: 115 http://deb.debian.org/debian bookworm/main i386 libpcre32-3 i386 2:8.39-15 [248 kB]
Get: 116 http://deb.debian.org/debian bookworm/main i386 libpcrecpp0v5 i386 2:8.39-15 [144 kB]
Get: 117 http://deb.debian.org/debian bookworm/main i386 libpcre3-dev i386 2:8.39-15 [669 kB]
Get: 118 http://deb.debian.org/debian bookworm/main i386 zlib1g-dev i386 1:1.2.13.dfsg-1 [913 kB]
Get: 119 http://deb.debian.org/debian bookworm/main i386 libpng-dev i386 1.6.39-2 [367 kB]
Get: 120 http://deb.debian.org/debian bookworm/main i386 libbz2-dev i386 1.0.8-5+b1 [31.5 kB]
Get: 121 http://deb.debian.org/debian bookworm/main i386 liblzma-dev i386 5.4.1-0.2 [272 kB]
Get: 122 http://deb.debian.org/debian bookworm/main i386 icu-devtools i386 72.1-3 [214 kB]
Get: 123 http://deb.debian.org/debian bookworm/main i386 libicu-dev i386 72.1-3 [10.6 MB]
Get: 124 http://deb.debian.org/debian bookworm/main i386 libxmuu1 i386 2:1.1.3-3 [24.1 kB]
Get: 125 http://deb.debian.org/debian bookworm/main i386 xauth i386 1:1.1.2-1 [36.7 kB]
Get: 126 http://deb.debian.org/debian bookworm/main i386 libpkgconf3 i386 1.8.1-1 [38.3 kB]
Get: 127 http://deb.debian.org/debian bookworm/main i386 pkgconf-bin i386 1.8.1-1 [29.8 kB]
Get: 128 http://deb.debian.org/debian bookworm/main i386 pkgconf i386 1.8.1-1 [25.9 kB]
Get: 129 http://deb.debian.org/debian bookworm/main i386 pkg-config i386 1.8.1-1 [13.7 kB]
Get: 130 http://deb.debian.org/debian bookworm/main i386 r-base-dev all 4.2.2.20221110-2 [4492 B]
Get: 131 http://deb.debian.org/debian bookworm/main i386 libfile-which-perl all 1.27-2 [15.1 kB]
Get: 132 http://deb.debian.org/debian bookworm/main i386 libswitch-perl all 2.17-3 [20.3 kB]
Get: 133 http://deb.debian.org/debian bookworm/main i386 libclone-perl i386 0.46-1 [13.8 kB]
Get: 134 http://deb.debian.org/debian bookworm/main i386 libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 135 http://deb.debian.org/debian bookworm/main i386 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 136 http://deb.debian.org/debian bookworm/main i386 libhttp-date-perl all 6.05-2 [10.5 kB]
Get: 137 http://deb.debian.org/debian bookworm/main i386 libio-html-perl all 1.004-3 [16.2 kB]
Get: 138 http://deb.debian.org/debian bookworm/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 139 http://deb.debian.org/debian bookworm/main i386 libregexp-ipv6-perl all 0.03-3 [5212 B]
Get: 140 http://deb.debian.org/debian bookworm/main i386 liburi-perl all 5.17-1 [90.4 kB]
Get: 141 http://deb.debian.org/debian bookworm/main i386 libhttp-message-perl all 6.44-1 [81.7 kB]
Get: 142 http://deb.debian.org/debian bookworm/main i386 libparams-util-perl i386 1.102-2+b1 [25.0 kB]
Get: 143 http://deb.debian.org/debian bookworm/main i386 libsub-install-perl all 0.929-1 [10.5 kB]
Get: 144 http://deb.debian.org/debian bookworm/main i386 libdata-optlist-perl all 0.113-1 [10.6 kB]
Get: 145 http://deb.debian.org/debian bookworm/main i386 libb-hooks-op-check-perl i386 0.22-2+b1 [10.6 kB]
Get: 146 http://deb.debian.org/debian bookworm/main i386 libdynaloader-functions-perl all 0.003-3 [12.7 kB]
Get: 147 http://deb.debian.org/debian bookworm/main i386 libdevel-callchecker-perl i386 0.008-2 [15.8 kB]
Get: 148 http://deb.debian.org/debian bookworm/main i386 libparams-classify-perl i386 0.015-2+b1 [23.7 kB]
Get: 149 http://deb.debian.org/debian bookworm/main i386 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get: 150 http://deb.debian.org/debian bookworm/main i386 libtry-tiny-perl all 0.31-2 [22.6 kB]
Get: 151 http://deb.debian.org/debian bookworm/main i386 libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get: 152 http://deb.debian.org/debian bookworm/main i386 libpackage-stash-perl all 0.40-1 [22.0 kB]
Get: 153 http://deb.debian.org/debian bookworm/main i386 libclass-load-perl all 0.25-2 [15.3 kB]
Get: 154 http://deb.debian.org/debian bookworm/main i386 libclass-load-xs-perl i386 0.10-2+b1 [14.1 kB]
Get: 155 http://deb.debian.org/debian bookworm/main i386 libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get: 156 http://deb.debian.org/debian bookworm/main i386 libdevel-globaldestruction-perl all 0.14-4 [7144 B]
Get: 157 http://deb.debian.org/debian bookworm/main i386 libalgorithm-c3-perl all 0.11-2 [10.8 kB]
Get: 158 http://deb.debian.org/debian bookworm/main i386 libclass-c3-perl all 0.35-2 [21.0 kB]
Get: 159 http://deb.debian.org/debian bookworm/main i386 libmro-compat-perl all 0.15-2 [11.8 kB]
Get: 160 http://deb.debian.org/debian bookworm/main i386 libdevel-overloadinfo-perl all 0.007-1 [7896 B]
Get: 161 http://deb.debian.org/debian bookworm/main i386 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB]
Get: 162 http://deb.debian.org/debian bookworm/main i386 libsub-exporter-perl all 0.989-1 [50.5 kB]
Get: 163 http://deb.debian.org/debian bookworm/main i386 libeval-closure-perl all 0.14-3 [11.2 kB]
Get: 164 http://deb.debian.org/debian bookworm/main i386 libdist-checkconflicts-perl all 0.11-2 [10.5 kB]
Get: 165 http://deb.debian.org/debian bookworm/main i386 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B]
Get: 166 http://deb.debian.org/debian bookworm/main i386 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB]
Get: 167 http://deb.debian.org/debian bookworm/main i386 libpackage-stash-xs-perl i386 0.30-1+b1 [20.2 kB]
Get: 168 http://deb.debian.org/debian bookworm/main i386 libmoose-perl i386 2.2203-1 [795 kB]
Get: 169 http://deb.debian.org/debian bookworm/main i386 libvariable-magic-perl i386 0.63-1+b1 [44.5 kB]
Get: 170 http://deb.debian.org/debian bookworm/main i386 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB]
Get: 171 http://deb.debian.org/debian bookworm/main i386 libsub-identify-perl i386 0.14-3 [10.9 kB]
Get: 172 http://deb.debian.org/debian bookworm/main i386 libsub-name-perl i386 0.26-2+b1 [12.7 kB]
Get: 173 http://deb.debian.org/debian bookworm/main i386 libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get: 174 http://deb.debian.org/debian bookworm/main i386 libcurl3-gnutls i386 7.88.1-10 [413 kB]
Get: 175 http://deb.debian.org/debian bookworm/main i386 libwww-curl-perl i386 4.17-10 [62.0 kB]
Get: 176 http://deb.debian.org/debian bookworm/main i386 libwww-curl-simple-perl all 0.100191-3 [12.6 kB]
Get: 177 http://deb.debian.org/debian bookworm/main i386 dh-r all 20230121 [37.9 kB]
Get: 178 http://deb.debian.org/debian bookworm/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB]
Get: 179 http://deb.debian.org/debian bookworm/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB]
Get: 180 http://deb.debian.org/debian bookworm/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB]
Get: 181 http://deb.debian.org/debian bookworm/main i386 javascript-common all 11+nmu1 [6260 B]
Get: 182 http://deb.debian.org/debian bookworm/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB]
Get: 183 http://deb.debian.org/debian bookworm/main i386 libjs-popper.js all 1.16.1+ds-6 [52.4 kB]
Get: 184 http://deb.debian.org/debian bookworm/main i386 libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB]
Get: 185 http://deb.debian.org/debian bookworm/main i386 libjs-d3 all 3.5.17-4 [132 kB]
Get: 186 http://deb.debian.org/debian bookworm/main i386 libjs-es5-shim all 4.6.7-2 [47.4 kB]
Get: 187 http://deb.debian.org/debian bookworm/main i386 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB]
Get: 188 http://deb.debian.org/debian bookworm/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 189 http://deb.debian.org/debian bookworm/main i386 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB]
Get: 190 http://deb.debian.org/debian bookworm/main i386 libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB]
Get: 191 http://deb.debian.org/debian bookworm/main i386 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B]
Get: 192 http://deb.debian.org/debian bookworm/main i386 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB]
Get: 193 http://deb.debian.org/debian bookworm/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 194 http://deb.debian.org/debian bookworm/main i386 libjs-json all 0~20221030+~1.0.8-1 [20.0 kB]
Get: 195 http://deb.debian.org/debian bookworm/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB]
Get: 196 http://deb.debian.org/debian bookworm/main i386 libjs-modernizr all 2.6.2+ds1-5 [47.1 kB]
Get: 197 http://deb.debian.org/debian bookworm/main i386 libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB]
Get: 198 http://deb.debian.org/debian bookworm/main i386 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB]
Get: 199 http://deb.debian.org/debian bookworm/main i386 liblua5.3-0 i386 5.3.6-2 [144 kB]
Get: 200 http://deb.debian.org/debian bookworm/main i386 libuv1 i386 1.44.2-1 [147 kB]
Get: 201 http://deb.debian.org/debian bookworm/main i386 libyaml-0-2 i386 0.2.5-1 [55.9 kB]
Get: 202 http://deb.debian.org/debian bookworm/main i386 r-cran-littler i386 0.3.17-1 [93.1 kB]
Get: 203 http://deb.debian.org/debian bookworm/main i386 littler all 0.3.17-1 [14.4 kB]
Get: 204 http://deb.debian.org/debian bookworm/main i386 node-bootstrap-sass all 3.4.3-2 [186 kB]
Get: 205 http://deb.debian.org/debian bookworm/main i386 node-html5shiv all 3.7.3+dfsg-5 [13.2 kB]
Get: 206 http://deb.debian.org/debian bookworm/main i386 node-normalize.css all 8.0.1-5 [12.7 kB]
Get: 207 http://deb.debian.org/debian bookworm/main i386 pandoc-data all 2.17.1.1-1.1 [417 kB]
Get: 208 http://deb.debian.org/debian bookworm/main i386 pandoc i386 2.17.1.1-1.1 [27.5 MB]
Get: 209 http://deb.debian.org/debian bookworm/main i386 r-bioc-biocgenerics all 0.44.0-2 [600 kB]
Get: 210 http://deb.debian.org/debian bookworm/main i386 r-bioc-biobase i386 2.58.0-2 [2113 kB]
Get: 211 http://deb.debian.org/debian bookworm/main i386 r-bioc-s4vectors i386 0.36.1-1 [2033 kB]
Get: 212 http://deb.debian.org/debian bookworm/main i386 r-bioc-iranges i386 2.32.0-1 [2197 kB]
Get: 213 http://deb.debian.org/debian bookworm/main i386 r-cran-dbi all 1.1.3-1 [687 kB]
Get: 214 http://deb.debian.org/debian bookworm/main i386 r-cran-bit i386 4.0.5-1 [1070 kB]
Get: 215 http://deb.debian.org/debian bookworm/main i386 r-cran-bit64 i386 4.0.5-1 [470 kB]
Get: 216 http://deb.debian.org/debian bookworm/main i386 r-cran-rlang i386 1.0.6-1 [1634 kB]
Get: 217 http://deb.debian.org/debian bookworm/main i386 r-cran-cli i386 3.6.0-1 [1288 kB]
Get: 218 http://deb.debian.org/debian bookworm/main i386 r-cran-glue i386 1.6.2-1 [152 kB]
Get: 219 http://deb.debian.org/debian bookworm/main i386 r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB]
Get: 220 http://deb.debian.org/debian bookworm/main i386 r-cran-vctrs i386 0.5.2-1 [1388 kB]
Get: 221 http://deb.debian.org/debian bookworm/main i386 r-cran-blob all 1.2.3-1 [49.5 kB]
Get: 222 http://deb.debian.org/debian bookworm/main i386 r-cran-fastmap i386 1.1.1-1 [70.3 kB]
Get: 223 http://deb.debian.org/debian bookworm/main i386 r-cran-cachem i386 1.0.7-1 [71.8 kB]
Get: 224 http://deb.debian.org/debian bookworm/main i386 r-cran-memoise all 2.0.1-1 [53.8 kB]
Get: 225 http://deb.debian.org/debian bookworm/main i386 r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get: 226 http://deb.debian.org/debian bookworm/main i386 r-cran-pkgkitten all 0.2.2-2 [27.0 kB]
Get: 227 http://deb.debian.org/debian bookworm/main i386 r-cran-rcpp i386 1.0.10-1 [2071 kB]
Get: 228 http://deb.debian.org/debian bookworm/main i386 r-cran-plogr all 0.2.0-3 [14.9 kB]
Get: 229 http://deb.debian.org/debian bookworm/main i386 r-cran-rsqlite i386 2.2.20-1 [1161 kB]
Get: 230 http://deb.debian.org/debian bookworm/main i386 r-cran-curl i386 5.0.0+dfsg-1 [174 kB]
Get: 231 http://deb.debian.org/debian bookworm/main i386 r-cran-jsonlite i386 1.8.4+dfsg-1 [445 kB]
Get: 232 http://deb.debian.org/debian bookworm/main i386 r-cran-mime i386 0.12-1+b1 [36.1 kB]
Get: 233 http://deb.debian.org/debian bookworm/main i386 r-cran-sys i386 3.4.1-1 [43.1 kB]
Get: 234 http://deb.debian.org/debian bookworm/main i386 r-cran-askpass i386 1.1-2 [22.3 kB]
Get: 235 http://deb.debian.org/debian bookworm/main i386 r-cran-openssl i386 2.0.5+dfsg-1 [394 kB]
Get: 236 http://deb.debian.org/debian bookworm/main i386 r-cran-r6 all 2.5.1-1 [105 kB]
Get: 237 http://deb.debian.org/debian bookworm/main i386 r-cran-httr all 1.4.5+dfsg-1 [465 kB]
Get: 238 http://deb.debian.org/debian bookworm/main i386 r-cran-png i386 0.1-8-1 [41.7 kB]
Get: 239 http://deb.debian.org/debian bookworm/main i386 r-bioc-zlibbioc all 1.44.0+dfsg-1 [9200 B]
Get: 240 http://deb.debian.org/debian bookworm/main i386 r-bioc-xvector i386 0.38.0-1 [621 kB]
Get: 241 http://deb.debian.org/debian bookworm/main i386 r-cran-bitops i386 1.0-7-1 [30.5 kB]
Get: 242 http://deb.debian.org/debian bookworm/main i386 r-cran-rcurl i386 1.98-1.10+dfsg-1 [785 kB]
Get: 243 http://deb.debian.org/debian bookworm/main i386 r-bioc-genomeinfodbdata all 1.2.9-1 [11.7 MB]
Get: 244 http://deb.debian.org/debian bookworm/main i386 r-bioc-genomeinfodb all 1.34.9-1 [3938 kB]
Get: 245 http://deb.debian.org/debian bookworm/main i386 r-cran-crayon all 1.5.2-1 [165 kB]
Get: 246 http://deb.debian.org/debian bookworm/main i386 r-bioc-biostrings i386 2.66.0-1 [13.8 MB]
Get: 247 http://deb.debian.org/debian bookworm/main i386 r-bioc-keggrest all 1.38.0+dfsg-1 [179 kB]
Get: 248 http://deb.debian.org/debian bookworm/main i386 r-bioc-annotationdbi all 1.60.0-1 [4696 kB]
Get: 249 http://deb.debian.org/debian bookworm/main i386 r-bioc-go.db all 3.16.0-1 [12.4 MB]
Get: 250 http://deb.debian.org/debian bookworm/main i386 r-bioc-impute i386 1.72.3-1 [664 kB]
Get: 251 http://deb.debian.org/debian bookworm/main i386 r-bioc-preprocesscore i386 1.60.2+ds-1 [157 kB]
Get: 252 http://deb.debian.org/debian bookworm/main i386 r-cran-acepack i386 1.4.1-2+b5 [59.2 kB]
Get: 253 http://deb.debian.org/debian bookworm/main i386 r-cran-backports i386 1.4.1-1 [101 kB]
Get: 254 http://deb.debian.org/debian bookworm/main i386 r-cran-base64enc i386 0.1-3-3 [28.4 kB]
Get: 255 http://deb.debian.org/debian bookworm/main i386 r-cran-digest i386 0.6.31-1 [179 kB]
Get: 256 http://deb.debian.org/debian bookworm/main i386 r-cran-ellipsis i386 0.3.2-2 [35.3 kB]
Get: 257 http://deb.debian.org/debian bookworm/main i386 r-cran-htmltools i386 0.5.4-1 [365 kB]
Get: 258 http://deb.debian.org/debian bookworm/main i386 r-cran-fs i386 1.6.1+dfsg-1 [228 kB]
Get: 259 http://deb.debian.org/debian bookworm/main i386 r-cran-rappdirs i386 0.3.3-1 [47.5 kB]
Get: 260 http://deb.debian.org/debian bookworm/main i386 r-cran-sass i386 0.4.5+dfsg-1 [990 kB]
Get: 261 http://deb.debian.org/debian bookworm/main i386 r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB]
Get: 262 http://deb.debian.org/debian bookworm/main i386 r-cran-bslib all 0.4.2+dfsg-1 [3773 kB]
Get: 263 http://deb.debian.org/debian bookworm/main i386 r-cran-checkmate i386 2.1.0-1 [616 kB]
Get: 264 http://deb.debian.org/debian bookworm/main i386 r-cran-chron i386 2.3-59-1 [194 kB]
Get: 265 http://deb.debian.org/debian bookworm/main i386 r-cran-cluster i386 2.1.4-1 [566 kB]
Get: 266 http://deb.debian.org/debian bookworm/main i386 r-cran-codetools all 0.2-19-1 [90.9 kB]
Get: 267 http://deb.debian.org/debian bookworm/main i386 r-cran-colorspace i386 2.1-0+dfsg-1 [1695 kB]
Get: 268 http://deb.debian.org/debian bookworm/main i386 r-cran-commonmark i386 1.8.1-1 [120 kB]
Get: 269 http://deb.debian.org/debian bookworm/main i386 r-cran-cpp11 all 0.4.3-1 [223 kB]
Get: 270 http://deb.debian.org/debian bookworm/main i386 r-cran-data.table i386 1.14.8+dfsg-1 [1703 kB]
Get: 271 http://deb.debian.org/debian bookworm/main i386 r-cran-deldir i386 1.0-6-1+b1 [278 kB]
Get: 272 http://deb.debian.org/debian bookworm/main i386 r-cran-iterators all 1.0.14-1 [337 kB]
Get: 273 http://deb.debian.org/debian bookworm/main i386 r-cran-foreach all 1.5.2-1 [122 kB]
Get: 274 http://deb.debian.org/debian bookworm/main i386 r-cran-doparallel all 1.0.17-1 [188 kB]
Get: 275 http://deb.debian.org/debian bookworm/main i386 r-cran-generics all 0.1.3-1 [81.4 kB]
Get: 276 http://deb.debian.org/debian bookworm/main i386 r-cran-magrittr i386 2.0.3-1 [201 kB]
Get: 277 http://deb.debian.org/debian bookworm/main i386 r-cran-fansi i386 1.0.4-1 [624 kB]
Get: 278 http://deb.debian.org/debian bookworm/main i386 r-cran-utf8 i386 1.2.3-1 [135 kB]
Get: 279 http://deb.debian.org/debian bookworm/main i386 r-cran-pillar all 1.8.1+dfsg-1 [463 kB]
Get: 280 http://deb.debian.org/debian bookworm/main i386 r-cran-tibble i386 3.1.8+dfsg-1 [513 kB]
Get: 281 http://deb.debian.org/debian bookworm/main i386 r-cran-withr all 2.5.0-1 [236 kB]
Get: 282 http://deb.debian.org/debian bookworm/main i386 r-cran-tidyselect i386 1.2.0+dfsg-1 [219 kB]
Get: 283 http://deb.debian.org/debian bookworm/main i386 r-cran-dplyr i386 1.0.10-1 [1230 kB]
Get: 284 http://deb.debian.org/debian bookworm/main i386 r-cran-dynamictreecut all 1.63-1-3 [93.5 kB]
Get: 285 http://deb.debian.org/debian bookworm/main i386 r-cran-evaluate all 0.20-1 [85.9 kB]
Get: 286 http://deb.debian.org/debian bookworm/main i386 r-cran-farver i386 2.1.1-1 [1404 kB]
Get: 287 http://deb.debian.org/debian bookworm/main i386 r-cran-fastcluster i386 1.2.3-2 [193 kB]
Get: 288 http://deb.debian.org/debian bookworm/main i386 r-cran-fontawesome all 0.5.0-1 [1304 kB]
Get: 289 http://deb.debian.org/debian bookworm/main i386 r-cran-foreign i386 0.8.84-1 [254 kB]
Get: 290 http://deb.debian.org/debian bookworm/main i386 r-cran-formula all 1.2-4-1 [175 kB]
Get: 291 http://deb.debian.org/debian bookworm/main i386 r-cran-gtable all 0.3.1+dfsg-1 [165 kB]
Get: 292 http://deb.debian.org/debian bookworm/main i386 r-cran-isoband i386 0.2.7-1 [1617 kB]
Get: 293 http://deb.debian.org/debian bookworm/main i386 r-cran-mass i386 7.3-58.2-1 [1123 kB]
Get: 294 http://deb.debian.org/debian bookworm/main i386 r-cran-lattice i386 0.20-45-3 [1172 kB]
Get: 295 http://deb.debian.org/debian bookworm/main i386 r-cran-nlme i386 3.1.162-1 [2250 kB]
Get: 296 http://deb.debian.org/debian bookworm/main i386 r-cran-matrix i386 1.5-3-1 [3821 kB]
Get: 297 http://deb.debian.org/debian bookworm/main i386 r-cran-mgcv i386 1.8-41-1 [3167 kB]
Get: 298 http://deb.debian.org/debian bookworm/main i386 r-cran-labeling all 0.4.2-1 [62.7 kB]
Get: 299 http://deb.debian.org/debian bookworm/main i386 r-cran-munsell all 0.5.0-2 [236 kB]
Get: 300 http://deb.debian.org/debian bookworm/main i386 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB]
Get: 301 http://deb.debian.org/debian bookworm/main i386 r-cran-viridislite all 0.4.1-1 [1299 kB]
Get: 302 http://deb.debian.org/debian bookworm/main i386 r-cran-scales all 1.2.1-1 [614 kB]
Get: 303 http://deb.debian.org/debian bookworm/main i386 r-cran-ggplot2 all 3.4.1+dfsg-1 [3333 kB]
Get: 304 http://deb.debian.org/debian bookworm/main i386 r-cran-gridextra all 2.3-3 [1024 kB]
Get: 305 http://deb.debian.org/debian bookworm/main i386 r-cran-xfun i386 0.37+dfsg-1 [395 kB]
Get: 306 http://deb.debian.org/debian bookworm/main i386 r-cran-highr all 0.10+dfsg-1 [38.1 kB]
Get: 307 http://deb.debian.org/debian bookworm/main i386 r-cran-survival i386 3.5-3-1 [5922 kB]
Get: 308 http://deb.debian.org/debian bookworm/main i386 r-cran-jpeg i386 0.1-10-1 [31.5 kB]
Get: 309 http://deb.debian.org/debian bookworm/main i386 r-cran-rcppeigen i386 0.3.3.9.3-1 [1185 kB]
Get: 310 http://deb.debian.org/debian bookworm/main i386 r-cran-interp i386 1.1-3-1 [1008 kB]
Get: 311 http://deb.debian.org/debian bookworm/main i386 r-cran-latticeextra all 0.6-30-1 [2194 kB]
Get: 312 http://deb.debian.org/debian bookworm/main i386 r-cran-rpart i386 4.1.19-1 [918 kB]
Get: 313 http://deb.debian.org/debian bookworm/main i386 r-cran-nnet i386 7.3-18-1 [112 kB]
Get: 314 http://deb.debian.org/debian bookworm/main i386 r-cran-stringi i386 1.7.12-1 [872 kB]
Get: 315 http://deb.debian.org/debian bookworm/main i386 r-cran-stringr all 1.5.0-1 [295 kB]
Get: 316 http://deb.debian.org/debian bookworm/main i386 r-cran-yaml i386 2.3.7-1 [108 kB]
Get: 317 http://deb.debian.org/debian bookworm/main i386 r-cran-knitr all 1.42+dfsg-1 [901 kB]
Get: 318 http://deb.debian.org/debian bookworm/main i386 r-cran-tinytex all 0.44-1 [138 kB]
Get: 319 http://deb.debian.org/debian bookworm/main i386 r-cran-later i386 1.3.0+dfsg-1+b1 [120 kB]
Get: 320 http://deb.debian.org/debian bookworm/main i386 r-cran-promises i386 1.2.0.1+dfsg-1 [275 kB]
Get: 321 http://deb.debian.org/debian bookworm/main i386 r-cran-httpuv i386 1.6.9+dfsg-1 [491 kB]
Get: 322 http://deb.debian.org/debian bookworm/main i386 r-cran-xtable all 1:1.8-4-2 [689 kB]
Get: 323 http://deb.debian.org/debian bookworm/main i386 r-cran-sourcetools i386 0.1.7-1-1 [47.1 kB]
Get: 324 http://deb.debian.org/debian bookworm/main i386 r-cran-shiny all 1.7.4+dfsg-2+deb12u1 [2751 kB]
Get: 325 http://deb.debian.org/debian bookworm/main i386 r-cran-rmarkdown all 2.20+dfsg-1 [2265 kB]
Get: 326 http://deb.debian.org/debian bookworm/main i386 r-cran-htmlwidgets all 1.6.1+dfsg-1 [120 kB]
Get: 327 http://deb.debian.org/debian bookworm/main i386 r-cran-rstudioapi all 0.14-1 [281 kB]
Get: 328 http://deb.debian.org/debian bookworm/main i386 r-cran-purrr i386 1.0.1-1 [508 kB]
Get: 329 http://deb.debian.org/debian bookworm/main i386 r-cran-tidyr i386 1.3.0-1 [1184 kB]
Get: 330 http://deb.debian.org/debian bookworm/main i386 r-cran-htmltable all 2.4.1-1 [386 kB]
Get: 331 http://deb.debian.org/debian bookworm/main i386 r-cran-viridis all 0.6.2-1 [2976 kB]
Get: 332 http://deb.debian.org/debian bookworm/main i386 r-cran-hmisc i386 4.8-0-1 [3240 kB]
Get: 333 http://deb.debian.org/debian bookworm/main i386 r-cran-matrixstats i386 0.63.0-1 [466 kB]
Fetched 277 MB in 4s (70.6 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package readline-common.
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Unpacking readline-common (8.2-1.3) ...
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Unpacking openssl (3.0.9-1) ...
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Unpacking ca-certificates (20230311) ...
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Unpacking libmagic-mgc (1:5.44-3) ...
Selecting previously unselected package libmagic1:i386.
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Unpacking libmagic1:i386 (1:5.44-3) ...
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Unpacking file (1:5.44-3) ...
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Unpacking gettext-base (0.21-12) ...
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Unpacking libuchardet0:i386 (0.0.7-1) ...
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Unpacking groff-base (1.22.4-10) ...
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Unpacking bsdextrautils (2.38.1-5+b1) ...
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Unpacking libpipeline1:i386 (1.5.7-1) ...
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Unpacking man-db (2.11.2-2) ...
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Moving old data out of the way
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Unpacking m4 (1.4.19-3) ...
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Unpacking autoconf (2.71-3) ...
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Unpacking autotools-dev (20220109.1) ...
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Unpacking automake (1:1.16.5-1.3) ...
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Unpacking autopoint (0.21-12) ...
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Unpacking dctrl-tools (2.24-3) ...
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Unpacking libarchive-zip-perl (1.68-1) ...
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Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
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Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
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Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:i386.
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Unpacking libelf1:i386 (0.188-2.1) ...
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Selecting previously unselected package libicu72:i386.
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Unpacking libicu72:i386 (72.1-3) ...
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Unpacking libxml2:i386 (2.9.14+dfsg-1.2) ...
Selecting previously unselected package gettext.
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Unpacking unzip (6.0-28) ...
Selecting previously unselected package libpaper1:i386.
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Unpacking libpaper1:i386 (1.1.29) ...
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Unpacking libpaper-utils (1.1.29) ...
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Unpacking xdg-utils (1.1.3-4.1) ...
Selecting previously unselected package libblas3:i386.
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Unpacking libblas3:i386 (3.11.0-2) ...
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Unpacking libexpat1:i386 (2.5.0-1) ...
Selecting previously unselected package libbrotli1:i386.
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Selecting previously unselected package libpng16-16:i386.
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Unpacking libpng16-16:i386 (1.6.39-2) ...
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Unpacking libbsd0:i386 (0.11.7-2) ...
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Unpacking libxcb-render0:i386 (1.15-1) ...
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Unpacking libcairo2:i386 (1.16.0-7) ...
Selecting previously unselected package libsasl2-modules-db:i386.
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Selecting previously unselected package libldap-2.5-0:i386.
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Selecting previously unselected package libnghttp2-14:i386.
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Unpacking libnghttp2-14:i386 (1.52.0-1) ...
Selecting previously unselected package libpsl5:i386.
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Unpacking libpsl5:i386 (0.21.2-1) ...
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Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:i386.
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Unpacking libcurl4:i386 (7.88.1-10) ...
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Unpacking libglib2.0-0:i386 (2.74.6-2) ...
Selecting previously unselected package libjpeg62-turbo:i386.
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Unpacking libjpeg62-turbo:i386 (1:2.1.5-2) ...
Selecting previously unselected package libgfortran5:i386.
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Unpacking libgfortran5:i386 (12.2.0-14) ...
Selecting previously unselected package liblapack3:i386.
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Unpacking liblapack3:i386 (3.11.0-2) ...
Selecting previously unselected package fontconfig.
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Unpacking fontconfig (2.14.1-4) ...
Selecting previously unselected package libfribidi0:i386.
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Unpacking libfribidi0:i386 (1.0.8-2.1) ...
Selecting previously unselected package libgraphite2-3:i386.
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Unpacking libgraphite2-3:i386 (1.3.14-1) ...
Selecting previously unselected package libharfbuzz0b:i386.
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Unpacking libharfbuzz0b:i386 (6.0.0+dfsg-3) ...
Selecting previously unselected package libthai-data.
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Unpacking libthai-data (0.1.29-1) ...
Selecting previously unselected package libdatrie1:i386.
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Unpacking libdatrie1:i386 (0.2.13-2+b1) ...
Selecting previously unselected package libthai0:i386.
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Unpacking libthai0:i386 (0.1.29-1) ...
Selecting previously unselected package libpango-1.0-0:i386.
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Unpacking libpango-1.0-0:i386 (1.50.12+ds-1) ...
Selecting previously unselected package libpangoft2-1.0-0:i386.
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Selecting previously unselected package libpangocairo-1.0-0:i386.
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Unpacking libpangocairo-1.0-0:i386 (1.50.12+ds-1) ...
Selecting previously unselected package libreadline8:i386.
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Unpacking libreadline8:i386 (8.2-1.3) ...
Selecting previously unselected package libtcl8.6:i386.
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Creating config file /etc/R/Renviron with new version
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Setting up r-cran-openssl (2.0.5+dfsg-1) ...
Setting up r-cran-stringr (1.5.0-1) ...
Setting up libwww-curl-simple-perl (0.100191-3) ...
Setting up r-cran-munsell (0.5.0-2) ...
Setting up r-cran-tibble (3.1.8+dfsg-1) ...
Setting up r-cran-survival (3.5-3-1) ...
Setting up r-cran-tidyselect (1.2.0+dfsg-1) ...
Setting up r-cran-interp (1.1-3-1) ...
Setting up r-bioc-genomeinfodb (1.34.9-1) ...
Setting up r-cran-httr (1.4.5+dfsg-1) ...
Setting up r-cran-scales (1.2.1-1) ...
Setting up r-cran-memoise (2.0.1-1) ...
Setting up r-cran-promises (1.2.0.1+dfsg-1) ...
Setting up r-cran-purrr (1.0.1-1) ...
Setting up r-cran-blob (1.2.3-1) ...
Setting up r-cran-htmltools (0.5.4-1) ...
Setting up r-bioc-xvector (0.38.0-1) ...
Setting up r-cran-sass (0.4.5+dfsg-1) ...
Setting up r-cran-dplyr (1.0.10-1) ...
Setting up dh-r (20230121) ...
Setting up r-cran-rsqlite (2.2.20-1) ...
Setting up r-cran-ggplot2 (3.4.1+dfsg-1) ...
Setting up r-cran-httpuv (1.6.9+dfsg-1) ...
Setting up r-cran-rpart (4.1.19-1) ...
Setting up r-bioc-biostrings (2.66.0-1) ...
Setting up r-cran-fontawesome (0.5.0-1) ...
Setting up r-cran-latticeextra (0.6-30-1) ...
Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
Setting up r-cran-viridis (0.6.2-1) ...
Setting up r-cran-bslib (0.4.2+dfsg-1) ...
Setting up r-cran-tidyr (1.3.0-1) ...
Setting up r-bioc-keggrest (1.38.0+dfsg-1) ...
Setting up r-bioc-annotationdbi (1.60.0-1) ...
Setting up r-bioc-go.db (3.16.0-1) ...
Setting up r-cran-shiny (1.7.4+dfsg-2+deb12u1) ...
Setting up r-cran-rmarkdown (2.20+dfsg-1) ...
Setting up r-cran-htmlwidgets (1.6.1+dfsg-1) ...
Setting up r-cran-htmltable (2.4.1-1) ...
Setting up r-cran-hmisc (4.8-0-1) ...
Processing triggers for libc-bin (2.36-9) ...
Processing triggers for ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
usrmerge is already the newest version (35).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/A99_set_merged_usr starting
Re-configuring usrmerge...
removed '/etc/unsupported-skip-usrmerge-conversion'
The system has been successfully converted.
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/r-cran-wgcna-1.72-1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../r-cran-wgcna_1.72-1-1_source.changes
dpkg-buildpackage: info: source package r-cran-wgcna
dpkg-buildpackage: info: source version 1.72-1-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
 debian/rules clean
dh clean --buildsystem R
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/r-cran-wgcna-1.72-1'
dh_auto_clean
rm -f src/WGCNA.so
make[1]: Leaving directory '/build/r-cran-wgcna-1.72-1'
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-wgcna/ -O--buildsystem=R
I: R Package: WGCNA Version: 1.72-1
I: Building using R version 4.2.2.20221110-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Sat, 21 Jan 2023 17:20:14 +0100
	mkdir -p /build/r-cran-wgcna-1.72-1/debian/r-cran-wgcna/usr/lib/R/site-library
	R CMD INSTALL -l /build/r-cran-wgcna-1.72-1/debian/r-cran-wgcna/usr/lib/R/site-library --clean . "--built-timestamp='Sat, 21 Jan 2023 17:20:14 +0100'"
* installing *source* package 'WGCNA' ...
** package 'WGCNA' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/build/r-cran-wgcna-1.72-1/src'
gcc -I"/usr/share/R/include" -DNDEBUG -DWITH_THREADS -I'/usr/lib/R/site-library/Rcpp/include'    -fpic  -g -O2 -ffile-prefix-map=/build/r-base-DQneTm/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2  -c corFunctions-utils.c -o corFunctions-utils.o
gcc -I"/usr/share/R/include" -DNDEBUG -DWITH_THREADS -I'/usr/lib/R/site-library/Rcpp/include'    -fpic  -g -O2 -ffile-prefix-map=/build/r-base-DQneTm/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2  -c corFunctions.c -o corFunctions.o
gcc -I"/usr/share/R/include" -DNDEBUG -DWITH_THREADS -I'/usr/lib/R/site-library/Rcpp/include'    -fpic  -g -O2 -ffile-prefix-map=/build/r-base-DQneTm/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2  -c myMatrixMultiplication.c -o myMatrixMultiplication.o
gcc -I"/usr/share/R/include" -DNDEBUG -DWITH_THREADS -I'/usr/lib/R/site-library/Rcpp/include'    -fpic  -g -O2 -ffile-prefix-map=/build/r-base-DQneTm/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2  -c networkFunctions.c -o networkFunctions.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -DWITH_THREADS -I'/usr/lib/R/site-library/Rcpp/include'    -fpic  -g -O2 -ffile-prefix-map=/build/r-base-DQneTm/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2  -c parallelQuantile.cc -o parallelQuantile.o
gcc -I"/usr/share/R/include" -DNDEBUG -DWITH_THREADS -I'/usr/lib/R/site-library/Rcpp/include'    -fpic  -g -O2 -ffile-prefix-map=/build/r-base-DQneTm/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -Wdate-time -D_FORTIFY_SOURCE=2  -c pivot.c -o pivot.o
g++ -std=gnu++14 -shared -L/usr/lib/R/lib -Wl,-z,relro -o WGCNA.so corFunctions-utils.o corFunctions.o myMatrixMultiplication.o networkFunctions.o parallelQuantile.o pivot.o -lpthread -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/build/r-cran-wgcna-1.72-1/src'
make[1]: Entering directory '/build/r-cran-wgcna-1.72-1/src'
make[1]: Leaving directory '/build/r-cran-wgcna-1.72-1/src'
installing to /build/r-cran-wgcna-1.72-1/debian/r-cran-wgcna/usr/lib/R/site-library/00LOCK-r-cran-wgcna-1.72-1/00new/WGCNA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (WGCNA)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 302.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 303.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 306.
W: Ignoring specified R dependency: R (>= 3.0)
I: Using r-cran-dynamictreecut for Depends:dynamicTreeCut (>= 1.62)
I: Using r-cran-fastcluster for Depends:fastcluster
I: Using r-bioc-org.hs.eg.db for Suggests:org.Hs.eg.db
W: Cannot find a debian package for Suggests:org.Mm.eg.db
W: Cannot find a debian package for Suggests:infotheo
W: Cannot find a debian package for Suggests:entropy
W: Cannot find a debian package for Suggests:minet
I: Using r-cran-matrixstats for Imports:matrixStats (>= 0.8.1)
I: Using r-cran-hmisc for Imports:Hmisc
I: Using r-bioc-impute for Imports:impute
I: Using r-cran-foreach for Imports:foreach
I: Using r-cran-doparallel for Imports:doParallel
I: Using r-bioc-preprocesscore for Imports:preprocessCore
I: Using r-cran-survival for Imports:survival
I: Using r-bioc-go.db for Imports:GO.db
I: Using r-bioc-annotationdbi for Imports:AnnotationDbi
I: Using r-cran-rcpp for Imports:Rcpp (>= 0.11.0)
I: Using r-cran-rcpp for LinkingTo:Rcpp
I: Use r-cran-wgcna as Debian binary package for variables substitution
   dh_installdocs -O--buildsystem=R
   dh_installchangelogs -O--buildsystem=R
   dh_installsystemduser -O--buildsystem=R
   dh_perl -O--buildsystem=R
   dh_link -O--buildsystem=R
   dh_strip_nondeterminism -O--buildsystem=R
   dh_compress -O--buildsystem=R
   dh_fixperms -O--buildsystem=R
   dh_missing -O--buildsystem=R
   dh_dwz -a -O--buildsystem=R
   dh_strip -a -O--buildsystem=R
   dh_makeshlibs -a -O--buildsystem=R
   dh_shlibdeps -a -O--buildsystem=R
   dh_installdeb -O--buildsystem=R
   dh_gencontrol -O--buildsystem=R
   dh_md5sums -O--buildsystem=R
   dh_builddeb -O--buildsystem=R
dpkg-deb: building package 'r-cran-wgcna' in '../r-cran-wgcna_1.72-1-1_i386.deb'.
dpkg-deb: building package 'r-cran-wgcna-dbgsym' in '../r-cran-wgcna-dbgsym_1.72-1-1_i386.deb'.
 dpkg-genbuildinfo --build=binary -O../r-cran-wgcna_1.72-1-1_i386.buildinfo
 dpkg-genchanges --build=binary -O../r-cran-wgcna_1.72-1-1_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/106440/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/106440 and its subdirectories
I: Current time: Tue Jul 16 17:59:37 +14 2024
I: pbuilder-time-stamp: 1721102377