I: pbuilder: network access will be disabled during build I: Current time: Mon Jun 24 07:19:44 +14 2024 I: pbuilder-time-stamp: 1719163184 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libtrexio_2.2.3-3.dsc] I: copying [./libtrexio_2.2.3.orig.tar.gz] I: copying [./libtrexio_2.2.3-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Oct 8 02:14:49 2022 +14 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libtrexio_2.2.3-3.dsc: no acceptable signature found dpkg-source: info: extracting libtrexio in libtrexio-2.2.3 dpkg-source: info: unpacking libtrexio_2.2.3.orig.tar.gz dpkg-source: info: unpacking libtrexio_2.2.3-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixParallelTests.diff dpkg-source: info: applying fix32bitBuilds.diff I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/54593/tmp/hooks/D01_modify_environment starting debug: Running on ionos6-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 24 07:19 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/54593/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/54593/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=099b7563821f4447940f0ae6fbcc122f LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=54593 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VtLL9s0X/pbuilderrc_vV2d --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VtLL9s0X/b2 --logfile b2/build.log --extrapackages usrmerge libtrexio_2.2.3-3.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 24 2023 bash -rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 21 2022 cat -rwxr-xr-x 1 root root 79816 Sep 21 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 21 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 21 2022 chown -rwxr-xr-x 1 root root 162024 Sep 21 2022 cp -rwxr-xr-x 1 root root 136916 Jan 6 2023 dash -rwxr-xr-x 1 root root 137160 Sep 21 2022 date -rwxr-xr-x 1 root root 100364 Sep 21 2022 dd -rwxr-xr-x 1 root root 108940 Sep 21 2022 df -rwxr-xr-x 1 root root 162152 Sep 21 2022 dir -rwxr-xr-x 1 root root 87760 Mar 24 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 21 2022 echo -rwxr-xr-x 1 root root 41 Jan 25 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 21 2022 false -rwxr-xr-x 1 root root 41 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 84272 Mar 24 2023 findmnt -rwsr-xr-x 1 root root 30240 Mar 23 2023 fusermount -rwxr-xr-x 1 root root 218680 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 20 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 21 2022 ln -rwxr-xr-x 1 root root 55600 Mar 24 2023 login -rwxr-xr-x 1 root root 162152 Sep 21 2022 ls -rwxr-xr-x 1 root root 214568 Mar 24 2023 lsblk -rwxr-xr-x 1 root root 96328 Sep 21 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 21 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 21 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 24 2023 more -rwsr-xr-x 1 root root 58912 Mar 24 2023 mount -rwxr-xr-x 1 root root 13856 Mar 24 2023 mountpoint -rwxr-xr-x 1 root root 157932 Sep 21 2022 mv lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 21 2022 pwd lrwxrwxrwx 1 root root 4 Apr 24 2023 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 21 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 21 2022 rm -rwxr-xr-x 1 root root 51080 Sep 21 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 3 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 6 2023 sed lrwxrwxrwx 1 root root 9 Jun 24 07:19 sh -> /bin/bash -rwxr-xr-x 1 root root 38760 Sep 21 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 21 2022 stty -rwsr-xr-x 1 root root 83492 Mar 24 2023 su -rwxr-xr-x 1 root root 38792 Sep 21 2022 sync -rwxr-xr-x 1 root root 598456 Apr 7 2023 tar -rwxr-xr-x 1 root root 13860 Nov 3 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 21 2022 touch -rwxr-xr-x 1 root root 34664 Sep 21 2022 true -rwxr-xr-x 1 root root 17892 Mar 23 2023 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 24 2023 umount -rwxr-xr-x 1 root root 38760 Sep 21 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 21 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 24 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/54593/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), gfortran, pkg-config, libhdf5-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbrotli1{a} libcurl4{a} libcurl4-openssl-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 41.4 MB of archives. After unpacking 156 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 libgfortran-12-dev i386 12.2.0-14 [761 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 gfortran-12 i386 12.2.0-14 [10.5 MB] Get: 34 http://deb.debian.org/debian bookworm/main i386 gfortran i386 4:12.2.0-3 [1432 B] Get: 35 http://deb.debian.org/debian bookworm/main i386 hdf5-helpers i386 1.10.8+repack1-1 [27.9 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libaec0 i386 1.0.6-1+b1 [22.4 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libsz2 i386 1.0.6-1+b1 [7884 B] Get: 38 http://deb.debian.org/debian bookworm/main i386 libaec-dev i386 1.0.6-1+b1 [21.5 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 43 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-9 [420 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 libcurl4-openssl-dev i386 7.88.1-9 [534 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 libhdf5-103-1 i386 1.10.8+repack1-1 [1175 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libhdf5-cpp-103-1 i386 1.10.8+repack1-1 [136 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 libhdf5-fortran-102 i386 1.10.8+repack1-1 [101 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-100 i386 1.10.8+repack1-1 [79.3 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-fortran-100 i386 1.10.8+repack1-1 [46.2 kB] Get: 54 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-cpp-100 i386 1.10.8+repack1-1 [26.0 kB] Get: 55 http://deb.debian.org/debian bookworm/main i386 zlib1g-dev i386 1:1.2.13.dfsg-1 [913 kB] Get: 56 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo i386 1:2.1.5-2 [169 kB] Get: 57 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo-dev i386 1:2.1.5-2 [304 kB] Get: 58 http://deb.debian.org/debian bookworm/main i386 libjpeg-dev i386 1:2.1.5-2 [71.8 kB] Get: 59 http://deb.debian.org/debian bookworm/main i386 libssl-dev i386 3.0.8-1 [2487 kB] Get: 60 http://deb.debian.org/debian bookworm/main i386 libhdf5-dev i386 1.10.8+repack1-1 [2754 kB] Get: 61 http://deb.debian.org/debian bookworm/main i386 libpkgconf3 i386 1.8.1-1 [38.3 kB] Get: 62 http://deb.debian.org/debian bookworm/main i386 pkgconf-bin i386 1.8.1-1 [29.8 kB] Get: 63 http://deb.debian.org/debian bookworm/main i386 pkgconf i386 1.8.1-1 [25.9 kB] Get: 64 http://deb.debian.org/debian bookworm/main i386 pkg-config i386 1.8.1-1 [13.7 kB] Fetched 41.4 MB in 1s (51.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../02-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_i386.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libaec-dev:i386 (1.0.6-1+b1) ... Setting up libjpeg-dev:i386 (1:2.1.5-2) ... Setting up libgfortran-12-dev:i386 (12.2.0-14) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up pkgconf:i386 (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up gfortran-12 (12.2.0-14) ... Setting up pkg-config:i386 (1.8.1-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:i386 (7.88.1-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcurl4-openssl-dev:i386 (7.88.1-9) ... Setting up libhdf5-103-1:i386 (1.10.8+repack1-1) ... Setting up libhdf5-cpp-103-1:i386 (1.10.8+repack1-1) ... Setting up libhdf5-hl-100:i386 (1.10.8+repack1-1) ... Setting up debhelper (13.11.4) ... Setting up libhdf5-hl-cpp-100:i386 (1.10.8+repack1-1) ... Setting up libhdf5-fortran-102:i386 (1.10.8+repack1-1) ... Setting up libhdf5-hl-fortran-100:i386 (1.10.8+repack1-1) ... Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... usrmerge is already the newest version (35). fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/54593/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... removed '/etc/unsupported-skip-usrmerge-conversion' The system has been successfully converted. I: user script /srv/workspace/pbuilder/54593/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/libtrexio-2.2.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libtrexio_2.2.3-3_source.changes dpkg-buildpackage: info: source package libtrexio dpkg-buildpackage: info: source version 2.2.3-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-config'. libtoolize: copying file 'build-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:14: installing 'build-config/compile' configure.ac:12: installing 'build-config/missing' Makefile.am: installing 'build-config/depcomp' dh_auto_configure ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking whether gcc and cc understand -c and -o together... yes checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for Fortran flag needed to accept free-form source... -ffree-form checking for Fortran flag to compile .f90 files... none checking whether gfortran understands -c and -o together... yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/i686-linux-gnu/12 -L/usr/lib/gcc/i686-linux-gnu/12/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/12/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/12/../../.. -lgfortran -lm -lquadmath checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether ln -s works... yes checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for fcntl.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for stdbool.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for h5cc... /usr/bin/h5cc checking for HDF5 type... serial checking for HDF5 libraries... yes (version 1.10.8) checking for hdf5.h... yes checking for H5Fcreate in -lhdf5... yes checking for main in -lhdf5_hl... yes checking for matching HDF5 Fortran wrapper... /usr/bin/h5fc checking for hdf5 >= 1.8... yes ./configure: line 18943: -I/usr/include/hdf5/serial : No such file or directory checking for int32_t... yes checking for int64_t... yes checking for size_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for memset... yes checking for mkdir... yes checking for strerror... yes checking for library containing sqrt... none required checking for math.h... yes checking for library containing pthread_create... none required checking for pthread.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating pkgconfig/trexio.pc config.status: creating include/config.h config.status: executing depfiles commands config.status: executing libtool commands ------------------------------------------------- trexio Version 2.2.3 8cc4f848f5419534388b33840d4374653a5d8ead Prefix ........: /usr CC ............: gcc CPPFLAGS ......: -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 CFLAGS ........: -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC FC ............: gfortran FCFLAGS .......: -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC LDFLAGS .......: -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro LIBS ..........: -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm Package features: Compilation with HDF5 ..: yes HDF5 version ...........: 1.10.8 Now type 'make []' where the optional is: all - build C library and Fortran binding check - run unit tests install - install the library -------------------------------------------------- dh_auto_build make -j15 make[1]: Entering directory '/build/libtrexio-2.2.3' gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -c -o tests/trexio_f.o tests/trexio_f.f90 make all-recursive make[2]: Entering directory '/build/libtrexio-2.2.3' make[3]: Entering directory '/build/libtrexio-2.2.3' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o src/trexio.lo src/trexio.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o src/trexio_text.lo src/trexio_text.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o src/trexio_hdf5.lo src/trexio_hdf5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio.c -fPIC -DPIC -o src/.libs/trexio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_text.c -fPIC -DPIC -o src/.libs/trexio_text.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_hdf5.c -fPIC -DPIC -o src/.libs/trexio_hdf5.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_hdf5.c -o src/trexio_hdf5.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_text.c -o src/trexio_text.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio.c -o src/trexio.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o src/libtrexio.la -rpath /usr/lib/i386-linux-gnu src/trexio.lo src/trexio_text.lo src/trexio_hdf5.lo -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -shared -fPIC -DPIC src/.libs/trexio.o src/.libs/trexio_text.o src/.libs/trexio_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libtrexio.so.0 -o src/.libs/libtrexio.so.0.0.0 libtool: link: (cd "src/.libs" && rm -f "libtrexio.so.0" && ln -s "libtrexio.so.0.0.0" "libtrexio.so.0") libtool: link: (cd "src/.libs" && rm -f "libtrexio.so" && ln -s "libtrexio.so.0.0.0" "libtrexio.so") libtool: link: ar cr src/.libs/libtrexio.a src/trexio.o src/trexio_text.o src/trexio_hdf5.o libtool: link: ranlib src/.libs/libtrexio.a libtool: link: ( cd "src/.libs" && rm -f "libtrexio.la" && ln -s "../libtrexio.la" "libtrexio.la" ) make[3]: Leaving directory '/build/libtrexio-2.2.3' make[2]: Leaving directory '/build/libtrexio-2.2.3' make[1]: Leaving directory '/build/libtrexio-2.2.3' dh_auto_test make -j15 check "TESTSUITEFLAGS=-j15 --verbose" VERBOSE=1 make[1]: Entering directory '/build/libtrexio-2.2.3' make check-recursive make[2]: Entering directory '/build/libtrexio-2.2.3' make[3]: Entering directory '/build/libtrexio-2.2.3' make tests/open_text tests/io_num_text tests/io_dset_float_text tests/io_dset_int_text tests/io_dset_sparse_text tests/io_determinant_text tests/io_safe_dset_float_text tests/io_str_text tests/io_dset_str_text tests/delete_group_text tests/overwrite_all_text tests/io_all tests/pre_close tests/open_hdf5 tests/io_num_hdf5 tests/io_dset_float_hdf5 tests/io_dset_int_hdf5 tests/io_dset_sparse_hdf5 tests/io_determinant_hdf5 tests/io_safe_dset_float_hdf5 tests/io_str_hdf5 tests/io_dset_str_hdf5 tests/delete_group_hdf5 tests/overwrite_all_hdf5 tests/test_f make[4]: Entering directory '/build/libtrexio-2.2.3' gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/open_text.o tests/open_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_num_text.o tests/io_num_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_float_text.o tests/io_dset_float_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_int_text.o tests/io_dset_int_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_sparse_text.o tests/io_dset_sparse_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_determinant_text.o tests/io_determinant_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_safe_dset_float_text.o tests/io_safe_dset_float_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_str_text.o tests/io_str_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_str_text.o tests/io_dset_str_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/delete_group_text.o tests/delete_group_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/overwrite_all_text.o tests/overwrite_all_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_all.o tests/io_all.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/pre_close.o tests/pre_close.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/open_hdf5.o tests/open_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_num_hdf5.o tests/io_num_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_float_hdf5.o tests/io_dset_float_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_int_hdf5.o tests/io_dset_int_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_sparse_hdf5.o tests/io_dset_sparse_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_determinant_hdf5.o tests/io_determinant_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_safe_dset_float_hdf5.o tests/io_safe_dset_float_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_str_hdf5.o tests/io_str_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_str_hdf5.o tests/io_dset_str_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/delete_group_hdf5.o tests/delete_group_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/overwrite_all_hdf5.o tests/overwrite_all_hdf5.c gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -c -o tests/test_f.o tests/test_f.f90 /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/open_text tests/open_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_num_text tests/io_num_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_float_text tests/io_dset_float_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_int_text tests/io_dset_int_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_sparse_text tests/io_dset_sparse_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_safe_dset_float_text tests/io_safe_dset_float_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_str_text tests/io_str_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_str_text tests/io_dset_str_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/delete_group_text tests/delete_group_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/overwrite_all_text tests/overwrite_all_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_all tests/io_all.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/pre_close tests/pre_close.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/open_text tests/open_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/open_hdf5 tests/open_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_num_text tests/io_num_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_sparse_text tests/io_dset_sparse_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_float_text tests/io_dset_float_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_int_text tests/io_dset_int_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_safe_dset_float_text tests/io_safe_dset_float_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_str_text tests/io_str_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_str_text tests/io_dset_str_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/delete_group_text tests/delete_group_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/overwrite_all_text tests/overwrite_all_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_num_hdf5 tests/io_num_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_all tests/io_all.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/pre_close tests/pre_close.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/open_hdf5 tests/open_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_float_hdf5 tests/io_dset_float_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_int_hdf5 tests/io_dset_int_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_num_hdf5 tests/io_num_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_sparse_hdf5 tests/io_dset_sparse_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_determinant_hdf5 tests/io_determinant_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_safe_dset_float_hdf5 tests/io_safe_dset_float_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_str_hdf5 tests/io_str_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_str_hdf5 tests/io_dset_str_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/delete_group_hdf5 tests/delete_group_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/overwrite_all_hdf5 tests/overwrite_all_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_determinant_text tests/io_determinant_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_float_hdf5 tests/io_dset_float_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_int_hdf5 tests/io_dset_int_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_sparse_hdf5 tests/io_dset_sparse_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_determinant_hdf5 tests/io_determinant_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_safe_dset_float_hdf5 tests/io_safe_dset_float_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_str_hdf5 tests/io_dset_str_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_str_hdf5 tests/io_str_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/delete_group_hdf5 tests/delete_group_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/overwrite_all_hdf5 tests/overwrite_all_hdf5.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_determinant_text tests/io_determinant_text.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=FC --mode=link gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/test_f tests/trexio_f.o tests/test_f.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -Wl,-z -Wl,relro -o tests/.libs/test_f tests/trexio_f.o tests/test_f.o -L/usr/lib/i386-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm make[4]: Leaving directory '/build/libtrexio-2.2.3' make check-TESTS make[4]: Entering directory '/build/libtrexio-2.2.3' make[5]: Entering directory '/build/libtrexio-2.2.3' PASS: tests/open_text PASS: tests/io_dset_int_text PASS: tests/io_dset_float_text PASS: tests/io_num_text PASS: tests/io_safe_dset_float_text PASS: tests/io_dset_sparse_text PASS: tests/io_dset_str_text PASS: tests/io_str_text PASS: tests/pre_close PASS: tests/open_hdf5 PASS: tests/io_num_hdf5 PASS: tests/io_dset_float_hdf5 PASS: tests/io_dset_int_hdf5 PASS: tests/io_str_hdf5 PASS: tests/io_safe_dset_float_hdf5 PASS: tests/io_dset_sparse_hdf5 PASS: tests/io_dset_str_hdf5 PASS: tests/io_determinant_hdf5 PASS: tests/delete_group_hdf5 PASS: tests/overwrite_all_hdf5 PASS: tests/delete_group_text PASS: tests/overwrite_all_text PASS: tests/io_determinant_text PASS: tests/io_all PASS: tests/test_f ============================================================================ Testsuite summary for trexio 2.2.3 ============================================================================ # TOTAL: 25 # PASS: 25 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/libtrexio-2.2.3' make[4]: Leaving directory '/build/libtrexio-2.2.3' make[3]: Leaving directory '/build/libtrexio-2.2.3' make[2]: Leaving directory '/build/libtrexio-2.2.3' make[1]: Leaving directory '/build/libtrexio-2.2.3' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j1 install DESTDIR=/build/libtrexio-2.2.3/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/libtrexio-2.2.3' make install-recursive make[2]: Entering directory '/build/libtrexio-2.2.3' make[3]: Entering directory '/build/libtrexio-2.2.3' make[4]: Entering directory '/build/libtrexio-2.2.3' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu' /bin/sh ./libtool --mode=install /usr/bin/install -c src/libtrexio.la '/build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c src/.libs/libtrexio.so.0.0.0 /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/libtrexio.so.0.0.0 libtool: install: (cd /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libtrexio.so.0.0.0 libtrexio.so.0 || { rm -f libtrexio.so.0 && ln -s libtrexio.so.0.0.0 libtrexio.so.0; }; }) libtool: install: (cd /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libtrexio.so.0.0.0 libtrexio.so || { rm -f libtrexio.so && ln -s libtrexio.so.0.0.0 libtrexio.so; }; }) libtool: install: /usr/bin/install -c src/.libs/libtrexio.lai /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/libtrexio.la libtool: install: /usr/bin/install -c src/.libs/libtrexio.a /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/libtrexio.a libtool: install: chmod 644 /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/libtrexio.a libtool: install: ranlib /build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/libtrexio.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/share/doc/trexio' /usr/bin/install -c -m 644 docs/index.html docs/examples.html docs/templator_hdf5.html docs/trex.html docs/README.html docs/templator_front.html docs/templator_text.html docs/trexio.css docs/tutorial_benzene.html docs/.htmlizer '/build/libtrexio-2.2.3/debian/tmp/usr/share/doc/trexio' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/include' /usr/bin/install -c -m 644 include/trexio.h include/trexio_f.f90 '/build/libtrexio-2.2.3/debian/tmp/usr/include' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 pkgconfig/trexio.pc '/build/libtrexio-2.2.3/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' make[4]: Leaving directory '/build/libtrexio-2.2.3' make[3]: Leaving directory '/build/libtrexio-2.2.3' make[2]: Leaving directory '/build/libtrexio-2.2.3' make[1]: Leaving directory '/build/libtrexio-2.2.3' dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/i386-linux-gnu/libtrexio.la exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/.htmlizer exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/README.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/examples.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/index.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/templator_front.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/templator_hdf5.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/templator_text.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/trex.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/trexio.css exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/tutorial_benzene.html exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libtrexio-dev (5), libtrexio0 (2) * dh_installdocs: libtrexio-dev (0), libtrexio0 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "i386-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libtrexio-dev' in '../libtrexio-dev_2.2.3-3_i386.deb'. dpkg-deb: building package 'libtrexio0' in '../libtrexio0_2.2.3-3_i386.deb'. dpkg-deb: building package 'libtrexio0-dbgsym' in '../libtrexio0-dbgsym_2.2.3-3_i386.deb'. dpkg-genbuildinfo --build=binary -O../libtrexio_2.2.3-3_i386.buildinfo dpkg-genchanges --build=binary -O../libtrexio_2.2.3-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/54593/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/54593/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/54593 and its subdirectories I: Current time: Mon Jun 24 07:20:34 +14 2024 I: pbuilder-time-stamp: 1719163234