I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 23 06:05:07 +14 2023 I: pbuilder-time-stamp: 1687449907 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libdata-stag-perl_0.14-3.dsc] I: copying [./libdata-stag-perl_0.14.orig.tar.gz] I: copying [./libdata-stag-perl_0.14-3.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Jun 13 12:18:31 2022 +14 gpgv: using RSA key B23862C415D6565A4E86CBD7579C160D4C9E23E8 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libdata-stag-perl_0.14-3.dsc: no acceptable signature found dpkg-source: info: extracting libdata-stag-perl in libdata-stag-perl-0.14 dpkg-source: info: unpacking libdata-stag-perl_0.14.orig.tar.gz dpkg-source: info: unpacking libdata-stag-perl_0.14-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_manpage_names.patch dpkg-source: info: applying no-sf-logo.patch dpkg-source: info: applying fix_pod_errors.patch dpkg-source: info: applying more_pod_errors.patch dpkg-source: info: applying more_spelling_fixes.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/24765/tmp/hooks/D01_modify_environment starting debug: Running on ionos12-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 23 06:05 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/24765/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/24765/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=7 ' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=f4e057591d674e5781db1a31af6ccf5f LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=24765 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.FJBaC0GY/pbuilderrc_Ks5v --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.FJBaC0GY/b2 --logfile b2/build.log libdata-stag-perl_0.14-3.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-9-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) i686 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 24 11:24 bash -rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 21 2022 cat -rwxr-xr-x 1 root root 79816 Sep 21 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 21 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 21 2022 chown -rwxr-xr-x 1 root root 162024 Sep 21 2022 cp -rwxr-xr-x 1 root root 136916 Jan 6 03:20 dash -rwxr-xr-x 1 root root 137160 Sep 21 2022 date -rwxr-xr-x 1 root root 100364 Sep 21 2022 dd -rwxr-xr-x 1 root root 108940 Sep 21 2022 df -rwxr-xr-x 1 root root 162152 Sep 21 2022 dir -rwxr-xr-x 1 root root 87760 Mar 24 00:20 dmesg lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 21 2022 echo -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep -rwxr-xr-x 1 root root 34664 Sep 21 2022 false -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep -rwxr-xr-x 1 root root 84272 Mar 24 00:20 findmnt -rwsr-xr-x 1 root root 30240 Mar 23 22:38 fusermount -rwxr-xr-x 1 root root 218680 Jan 25 04:43 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 20 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 21 2022 ln -rwxr-xr-x 1 root root 55600 Mar 24 01:43 login -rwxr-xr-x 1 root root 162152 Sep 21 2022 ls -rwxr-xr-x 1 root root 214568 Mar 24 00:20 lsblk -rwxr-xr-x 1 root root 96328 Sep 21 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 21 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 21 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 24 00:20 more -rwsr-xr-x 1 root root 58912 Mar 24 00:20 mount -rwxr-xr-x 1 root root 13856 Mar 24 00:20 mountpoint -rwxr-xr-x 1 root root 157932 Sep 21 2022 mv lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 21 2022 pwd lrwxrwxrwx 1 root root 4 Apr 24 11:24 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 21 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 21 2022 rm -rwxr-xr-x 1 root root 51080 Sep 21 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 3 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 6 09:55 sed lrwxrwxrwx 1 root root 9 Jun 23 06:05 sh -> /bin/bash -rwxr-xr-x 1 root root 38760 Sep 21 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 21 2022 stty -rwsr-xr-x 1 root root 83492 Mar 24 00:20 su -rwxr-xr-x 1 root root 38792 Sep 21 2022 sync -rwxr-xr-x 1 root root 598456 Apr 7 04:25 tar -rwxr-xr-x 1 root root 13860 Nov 3 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 21 2022 touch -rwxr-xr-x 1 root root 34664 Sep 21 2022 true -rwxr-xr-x 1 root root 17892 Mar 23 22:38 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 24 00:20 umount -rwxr-xr-x 1 root root 38760 Sep 21 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 21 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 24 00:20 wdctl lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/24765/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), perl, libio-string-perl, libxml-perl, rename dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libio-string-perl; however: Package libio-string-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-perl; however: Package libxml-perl is not installed. pbuilder-satisfydepends-dummy depends on rename; however: Package rename is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libclone-perl{a} libdebhelper-perl{a} libelf1{a} libencode-locale-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libregexp-ipv6-perl{a} libsub-override-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml-parser-perl{a} libxml-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} rename{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libdata-dump-perl libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libltdl-dev libmail-sendmail-perl libmailtools-perl lynx wget 0 packages upgraded, 61 newly installed, 0 to remove and 0 not upgraded. Need to get 22.5 MB of archives. After unpacking 81.2 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 openssl i386 3.0.9-1 [1420 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 ca-certificates all 20230311 [153 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 24 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 26 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 libclone-perl i386 0.46-1 [13.8 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 libhttp-date-perl all 6.05-2 [10.5 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 libfile-listing-perl all 6.15-1 [12.6 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 libregexp-ipv6-perl all 0.03-3 [5212 B] Get: 42 http://deb.debian.org/debian bookworm/main i386 liburi-perl all 5.17-1 [90.4 kB] Get: 43 http://deb.debian.org/debian bookworm/main i386 libhtml-parser-perl i386 3.81-1 [102 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 libhtml-tree-perl all 5.07-3 [211 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 libio-html-perl all 1.004-3 [16.2 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 libhttp-message-perl all 6.44-1 [81.7 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 perl-openssl-defaults i386 7+b1 [7920 B] Get: 51 http://deb.debian.org/debian bookworm/main i386 libnet-ssleay-perl i386 1.92-2+b1 [318 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 libio-socket-ssl-perl all 2.081-2 [219 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 libio-string-perl all 1.08-4 [12.1 kB] Get: 54 http://deb.debian.org/debian bookworm/main i386 libnet-http-perl all 6.22-1 [25.3 kB] Get: 55 http://deb.debian.org/debian bookworm/main i386 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 56 http://deb.debian.org/debian bookworm/main i386 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 57 http://deb.debian.org/debian bookworm/main i386 libwww-perl all 6.68-1 [186 kB] Get: 58 http://deb.debian.org/debian bookworm/main i386 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get: 59 http://deb.debian.org/debian bookworm/main i386 libxml-parser-perl i386 2.46-4 [202 kB] Get: 60 http://deb.debian.org/debian bookworm/main i386 libxml-perl all 0.08-4 [93.0 kB] Get: 61 http://deb.debian.org/debian bookworm/main i386 rename all 2.01-1 [21.0 kB] Fetched 22.5 MB in 0s (54.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.0.9-1_i386.deb ... Unpacking openssl (3.0.9-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../03-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../05-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../08-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../10-bsdextrautils_2.38.1-5+b1_i386.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../11-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../12-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../18-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../19-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../20-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../21-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. 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Preparing to unpack .../57-liblwp-protocol-https-perl_6.10-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.10-1) ... Selecting previously unselected package libxml-parser-perl. Preparing to unpack .../58-libxml-parser-perl_2.46-4_i386.deb ... Unpacking libxml-parser-perl (2.46-4) ... Selecting previously unselected package libxml-perl. Preparing to unpack .../59-libxml-perl_0.08-4_all.deb ... Unpacking libxml-perl (0.08-4) ... Selecting previously unselected package rename. Preparing to unpack .../60-rename_2.01-1_all.deb ... Unpacking rename (2.01-1) ... Setting up libexpat1:i386 (2.5.0-1) ... Setting up libpipeline1:i386 (1.5.7-1) ... Setting up libicu72:i386 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libclone-perl:i386 (0.46-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdebhelper-perl (13.11.4) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libmagic1:i386 (1:5.44-3) ... Setting up perl-openssl-defaults:i386 (7+b1) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libencode-locale-perl (1.05-3) ... Setting up rename (2.01-1) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up file (1:5.44-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up netbase (6.4) ... Setting up openssl (3.0.9-1) ... Setting up libelf1:i386 (0.188-2.1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.2) ... Setting up liburi-perl (5.17-1) ... Setting up libnet-ssleay-perl:i386 (1.92-2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up gettext (0.21-12) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libtool (2.4.7-5) ... Setting up libnet-http-perl (6.22-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libhtml-parser-perl:i386 (3.81-1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.11.4) ... Setting up libwww-perl (6.68-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up libxml-parser-perl (2.46-4) ... Setting up libxml-perl (0.08-4) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/24765/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for bookworm I: user script /srv/workspace/pbuilder/24765/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/libdata-stag-perl-0.14/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libdata-stag-perl_0.14-3_source.changes dpkg-buildpackage: info: source package libdata-stag-perl dpkg-buildpackage: info: source version 0.14-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Jelmer Vernooij dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -ffile-prefix-map=/build/libdata-stag-perl-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libdata-stag-perl-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro" External Module Graph::Directed, Generic Graph data stucture and algorithms, is not installed on this computer. Data::Stag::GraphHandler in Data::Stag needs it for transforming stag trees to graphs External Module JSON, JSON parser and writer, is not installed on this computer. Data::Stag::JSONWriter in Data::Stag needs it for Writing JSON External Module Tk, Tk, is not installed on this computer. stag-view.pl in Data::Stag needs it for tree viewer External Module MLDBM, multilevel hash store, is not installed on this computer. Data::Stag::StagDB in Data::Stag needs it for indexing stag nodes External Module XML::LibXSLT, XSLT, is not installed on this computer. Data::Stag::XSLTHandler in Data::Stag needs it for XSLT Transformations External Module GD, Graphical Drawing Toolkit, is not installed on this computer. stag-drawtree.pl in Data::Stag needs it for drawing trees Information: There are some external packages and perl modules, listed above, which stag uses. This only effects the functionality which is listed above: the rest of stag will work fine, which includes nearly all of the core functionality. Enjoy the rest of stag, which you can use after going 'make install' Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Data Writing MYMETA.yml and MYMETA.json dh_auto_build make -j7 make[1]: Entering directory '/build/libdata-stag-perl-0.14' cp Data/Stag/XSLTHandler.pm blib/lib/Data/Stag/XSLTHandler.pm cp Data/Stag/StagImpl.pm blib/lib/Data/Stag/StagImpl.pm cp Data/Stag/SAX2Stag.pm blib/lib/Data/Stag/SAX2Stag.pm cp Data/Stag/SxprParser.pm blib/lib/Data/Stag/SxprParser.pm cp Data/Stag/ITextParser.pm blib/lib/Data/Stag/ITextParser.pm cp Data/Stag/BaseHandler.pm blib/lib/Data/Stag/BaseHandler.pm cp Data/Stag/PodParser.pm blib/lib/Data/Stag/PodParser.pm cp Data/Stag/ChainHandler.pm blib/lib/Data/Stag/ChainHandler.pm cp Data/Stag/BaseGenerator.pm blib/lib/Data/Stag/BaseGenerator.pm cp Data/Stag/Writer.pm blib/lib/Data/Stag/Writer.pm cp Data/Stag/PerlWriter.pm blib/lib/Data/Stag/PerlWriter.pm cp Data/Stag/Simple.pm blib/lib/Data/Stag/Simple.pm cp Data/Stag/Util.pm blib/lib/Data/Stag/Util.pm cp Data/Stag/XMLWriter.pm blib/lib/Data/Stag/XMLWriter.pm cp Data/Stag/XMLParser.pm blib/lib/Data/Stag/XMLParser.pm cp Data/Stag/ITextWriter.pm blib/lib/Data/Stag/ITextWriter.pm cp Data/Stag/StagDB.pm blib/lib/Data/Stag/StagDB.pm cp Data/Stag/StagI.pm blib/lib/Data/Stag/StagI.pm cp Data/Stag.pm blib/lib/Data/Stag.pm cp Data/Stag/IndentParser.pm blib/lib/Data/Stag/IndentParser.pm cp Data/Stag/Arr2HTML.pm blib/lib/Data/Stag/Arr2HTML.pm cp Data/Stag/null.pm blib/lib/Data/Stag/null.pm cp Data/Stag/Base.pm blib/lib/Data/Stag/Base.pm cp Data/Stag/IndentWriter.pm blib/lib/Data/Stag/IndentWriter.pm cp Data/Stag/XSLHandler.pm blib/lib/Data/Stag/XSLHandler.pm cp Data/Stag/GraphHandler.pm blib/lib/Data/Stag/GraphHandler.pm cp Data/Stag/DTDWriter.pm blib/lib/Data/Stag/DTDWriter.pm cp Data/Stag/HashDB.pm blib/lib/Data/Stag/HashDB.pm cp Data/Stag/SxprWriter.pm blib/lib/Data/Stag/SxprWriter.pm cp Data/Stag/JSONWriter.pm blib/lib/Data/Stag/JSONWriter.pm cp scripts/stag-autoschema.pl blib/script/stag-autoschema.pl cp scripts/stag-db.pl blib/script/stag-db.pl cp scripts/stag-diff.pl blib/script/stag-diff.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-autoschema.pl cp scripts/stag-drawtree.pl blib/script/stag-drawtree.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-db.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-diff.pl cp scripts/stag-filter.pl blib/script/stag-filter.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-drawtree.pl cp scripts/stag-findsubtree.pl blib/script/stag-findsubtree.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-filter.pl cp scripts/stag-flatten.pl blib/script/stag-flatten.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-findsubtree.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-flatten.pl cp scripts/stag-grep.pl blib/script/stag-grep.pl cp scripts/stag-handle.pl blib/script/stag-handle.pl cp scripts/stag-itext2simple.pl blib/script/stag-itext2simple.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-grep.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-handle.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-itext2simple.pl cp scripts/stag-itext2sxpr.pl blib/script/stag-itext2sxpr.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-itext2sxpr.pl cp scripts/stag-itext2xml.pl blib/script/stag-itext2xml.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-itext2xml.pl cp scripts/stag-join.pl blib/script/stag-join.pl cp scripts/stag-merge.pl blib/script/stag-merge.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-join.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-merge.pl cp scripts/stag-mogrify.pl blib/script/stag-mogrify.pl cp scripts/stag-parse.pl blib/script/stag-parse.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-mogrify.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-parse.pl cp scripts/stag-query.pl blib/script/stag-query.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-query.pl cp scripts/stag-splitter.pl blib/script/stag-splitter.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-splitter.pl cp scripts/stag-view.pl blib/script/stag-view.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-view.pl cp scripts/stag-xml2itext.pl blib/script/stag-xml2itext.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/stag-xml2itext.pl Manifying 20 pod documents Manifying 27 pod documents make[1]: Leaving directory '/build/libdata-stag-perl-0.14' dh_auto_test make -j7 test TEST_VERBOSE=1 make[1]: Entering directory '/build/libdata-stag-perl-0.14' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/autoschema.t ....... 1..3 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 '(db (species_set (species+ (common_name "VARCHAR\(31\)") (binomial "VARCHAR\(31\)") (tax_id "INT"))) (gene_set (gene+ (symbol "VARCHAR\(15\)") (tax_id "INT") (phenotype* "VARCHAR\(31\)") (GO_term "VARCHAR\(63\)") (map? (cytological (chromosome "INT") (band "VARCHAR\(15\)"))) (synonym "VARCHAR\(7\)"))) (similarity_set (pair+ (symbol+ "VARCHAR\(15\)")))) ok 1 ok 2 ok 3 ok t/chainhandler.t ..... 1..2 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 chainhandler... checking.. ok 1 ok 2 ok t/db.t ............... 1..1 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 lucas george star wars sci-fi ford harrison han solo fisher carrie princess leia hamill mark luke skywalker earl-jones james darth vader prowse david darth vader guiness alec obi-wan kenobi attack of the clones sci-fi mcgregor ewan obi-wan kenobi portman natalie princess amigdala jackson peter braindead horror - - - lord of the rings fantasy lee christopher saruman kellan ian gandalf kurosawa akira seven samurai samurai mifune toshiro Kikuchiyo cameron john terminator sci-fi schwarzenegger arnold terminator terminator2 sci-fi schwarzenegger arnold terminator coen joel barton fink odd turturro john barton fink goodman john charlie meadows coen ethan barton fink odd turturro john barton fink goodman john charlie meadows star wars sci-fi lucas george US han solo ford harrison princess leia fisher carrie luke skywalker hamill mark darth vader earl-jones james prowse david obi-wan kenobi guiness alec attack of the clones sci-fi lucas george US obi-wan kenobi mcgregor ewan princess amigdala portman natalie braindead horror jackson peter new zealand - - - lord of the rings fantasy jackson peter new zealand saruman lee christopher gandalf kellan ian seven samurai samurai kurosawa akira japan Kikuchiyo mifune toshiro terminator sci-fi cameron john US terminator schwarzenegger arnold terminator2 sci-fi cameron john US terminator schwarzenegger arnold barton fink odd coen joel US coen ethan US barton fink turturro john charlie meadows goodman john isa dog mammal isa cat mammal isa mammal animal isa zebra horse isa horse mammal isa unicorn horse isa unicorn imaginary-animal instance-of rover dog instance-of whiskers cat instance-of spot dog parent-of spot rover ok 1 ok t/emptytag.t ......... 1..3 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 foo 0 0 '(a (b "foo") (c "") (d "0") (e "0") (f "")) ok 1 ok 2 4 1 1 4 ok 3 ok t/get.t .............. 1..17 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 ok 1 ok 2 house mouse Mus musculus 10090 fruitfly Drosophila melanogaster 7227 human Homo sapiens 9606 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 HGNC 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 Hfe MR2 10090 integral membrane protein S:HGNC Hfe HGNC Hfe WNT3A Wnt3a ok 12 ok 13 ok 14 ok 15 ok 16 ok 17 ok t/handlers.t ......... 1..9 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 CACHING HGNC CACHING Hfe house mouse Mus musculus 10090 fruitfly Drosophila melanogaster 7227 human Homo sapiens 9606 HGNC 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 1 human Homo sapiens 9606 Hfe MR2 10090 integral membrane protein house mouse Mus musculus 10090 HGNC Hfe HGNC 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 1 human Homo sapiens 9606 Hfe MR2 10090 integral membrane protein house mouse Mus musculus 10090 WNT3A Wnt3a Dunno what symbol WNT3A is Dunno what symbol Wnt3a is remaining tree: '(db (species_set (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090")) (species (common_name "fruitfly") (binomial "Drosophila melanogaster") (tax_id "7227")) (species (common_name "human") (binomial "Homo sapiens") (tax_id "9606"))) (gene_set (gene (symbol "HGNC") (tax_id "9606") (phenotype "Hemochromatosis") (phenotype "Porphyria variegata") (GO_term "iron homeostasis") (map (cytological (chromosome "6") (band "p21.3")) (foo "1")) (species (common_name "human") (binomial "Homo sapiens") (tax_id "9606"))) (gene (symbol "Hfe") (synonym "MR2") (tax_id "10090") (GO_term "integral membrane protein") (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090")))) (similarity_set (pair (symbol "HGNC") (symbol "Hfe") (gene (symbol "HGNC") (tax_id "9606") (phenotype "Hemochromatosis") (phenotype "Porphyria variegata") (GO_term "iron homeostasis") (map (cytological (chromosome "6") (band "p21.3")) (foo "1")) (species (common_name "human") (binomial "Homo sapiens") (tax_id "9606"))) (gene (symbol "Hfe") (synonym "MR2") (tax_id "10090") (GO_term "integral membrane protein") (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090")))) (pair (symbol "WNT3A") (symbol "Wnt3a") (comment "Dunno what symbol WNT3A is") (comment "Dunno what symbol Wnt3a is")))) HGNC Hfe HGNC 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 1 human Homo sapiens 9606 Hfe MR2 10090 integral membrane protein house mouse Mus musculus 10090 WNT3A Wnt3a Dunno what symbol WNT3A is Dunno what symbol Wnt3a is HGNC 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 1 human Homo sapiens 9606 Hfe MR2 10090 integral membrane protein house mouse Mus musculus 10090 ok 1 ok 2 ok 3 ok 4 '(gene (symbol "Hfe") (synonym "MR2") (tax_id "10090") (GO_term "integral membrane protein") (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090"))) ok 5 ok 6 ok 7 ok 8 ok 9 names=gene_set gene symbol tax_id phenotype phenotype GO_term map cytological chromosome band foo species common_name binomial tax_id gene symbol synonym tax_id GO_term species common_name binomial tax_id =>gene_set gene_set=>gene gene=>symbol gene=>tax_id gene=>phenotype gene=>phenotype gene=>GO_term gene=>map map=>cytological cytological=>chromosome cytological=>band map=>foo gene=>species species=>common_name species=>binomial species=>tax_id gene_set=>gene gene=>symbol gene=>synonym gene=>tax_id gene=>GO_term gene=>species species=>common_name species=>binomial species=>tax_id ok t/handlers2.t ........ 1..9 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 original: house mouse Mus musculus 10090 house mouse Mus musculus 10090 fruitfly Drosophila melanogaster 7227 fruitfly Drosophila melanogaster 7227 human Homo sapiens 9606 human Homo sapiens 9606 remaining tree: '(db (species_set (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090")) (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090")) (species (common_name "fruitfly") (binomial "Drosophila melanogaster") (tax_id "7227")) (species (common_name "fruitfly") (binomial "Drosophila melanogaster") (tax_id "7227")) (species (common_name "human") (binomial "Homo sapiens") (tax_id "9606")) (species (common_name "human") (binomial "Homo sapiens") (tax_id "9606")))) ok 1 ok 2 ok 3 '( "") '( "") ok 4 ok 5 ok 6 ok 7 ok 8 '(set) ok 9 ok t/hashdb.t ........... 1..2 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 '(species (common_name "fruitfly") (binomial "Drosophila melanogaster") (tax_id "7227")) ok 1 HASHING HASHED gene: symbol: HGNC tax_id: 9606 phenotype: Hemochromatosis phenotype: Porphyria variegata GO_term: iron homeostasis map: cytological: chromosome: 6 band: p21.3 ok 2 ok t/homol.t ............ 1..9 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 HGNC human Homo sapiens 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 Hfe MR2 house mouse Mus musculus 10090 integral membrane protein ok 1 ok 2 ok 3 ok 4 ok 5 HGNC human Homo sapiens 9606 Hemochromatosis Porphyria variegata iron homeostasis 6 p21.3 Hfe MR2 house mouse Mus musculus 10090 integral membrane protein ok 6 ok 7 ok 8 ok 9 names=gene_set gene symbol species common_name binomial tax_id phenotype phenotype GO_term map cytological chromosome band gene symbol synonym species common_name binomial tax_id GO_term =>gene_set gene_set=>gene gene=>symbol gene=>species species=>common_name species=>binomial species=>tax_id gene=>phenotype gene=>phenotype gene=>GO_term gene=>map map=>cytological cytological=>chromosome cytological=>band gene_set=>gene gene=>symbol gene=>synonym gene=>species species=>common_name species=>binomial species=>tax_id gene=>GO_term ok t/parsestr.t ......... 1..6 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31 bar y ok 1 example of mixedcontent '(yo (paragraph (@ (id "1")) (. "example of") (bold "mixed") (. "content"))) ok 2 ok 3 ok 4 '(yo (paragraph (@ (id "1")) (. "example of") (bold "mixed") (. "content"))) TEXT '(yo (paragraph (@ (id "1")) (. "TEXT"))) ok 5 ok 6 ok t/qmatch.t ........... 1..9 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:38 2023 # Current time GMT: Thu Jun 22 16:05:38 2023 # Using Test.pm version 1.31
foo methyl
big dave shuggy
bar auchtermuchty
ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 1 2 2 ok 7 ok 8 2 ok 9 1 2 ok t/roundtrip-attrs.t .. 1..5 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 '(address (a (@ (href "mailto:cjm@fruitfly.org")) (. "fred"))) ok 4 Stag - Structured Tag Library

Stag - Structured Tag Library

top #000000 images/celtic-stag.gif The Stag project currently consists of two perl modules, both of which are available from http://www.cpan.orgCPANor http://sourceforge.net/projects/stagsourceforge:

Data::Stag

This module is for manipulating data as recursively nested tag/value pairs ( Structured tags or Simple Tree aggreggates). At this time there is only a perl implementation, http://search.cpan.org/perldoc?Data::StagData::Stag, but C and Lisp implementations are planned.



Stags can easily be represented as XML or as lisp-style S-expressions, or using the Stag native indented text format. They can also be represented in perl using nested arrays.

DBIx::DBStag

This module is for conversion between relational representations and hierarchical (Stag) representations. SQL query results are automatically decomposed into the relations and a hierarchical structure is inferred. This modules also allows you to create SQL templates - a powerful way of reusing SQL statements joining multiple tables.

http://search.cpan.org/perldoc?DBIx::DBStagDBIx::DBStag
#FF8888 http://www.godatabase.org/cgi-bin/ubiq/ubiq.cgiUBIQ Query Interface A demo of DBStag for mapping query results to hierarchical tag-value data. This interface provides WWW access to a number of bioinformatics databases (Gene Ontology, Ensembl, Chado, BioSQL, GadFly). Templates can be selected, or you can feed in your own SQL.
#FF8888 http://sourceforge.net/projects/stagStag project page on Sourceforge Here you can find the Stag CVS repository, mail lists, etc
#FF8888 http://www.fruitfly.org/~cjm/rel-talk/dbistag.htmlDBStag Tutorial Brief tutorial on basic DBStag usage for biological databases. (slightly out of date - some aspects of DBStag may have changed)
#FF8888 http://search.cpan.org/perldoc?DBIx::DBStag::CookbookDBIx::DBStag::Cookbook DBStag cookbook - shows how to generate a normalised relational db from an XML source (the CIA world factbook), create your own SQL templates and build a WWW query interface
#FF8888 http://search.cpan.org/perldoc?DBIx::DBStag::SQLTemplateDBIx::DBStag::SQLTemplate The POD manpage describing SQL templates - a powerful way of reusing complex SQL statements
#FF8888 stag-poster.htmlStag Poster DBStag poster from Genome Informatics 2003 at Cold Spring Harbor Laboratory (large image)
http://sourceforge.net 0 31 http://sourceforge.net/sflogo.php?group_id=68482&type=1 88 SourceForge.net Logo
mailto:cjm@fruitfly.orgfred
Last modified: Mon Apr 12 11:33:36 PDT 2004 mailto:cjm@fruitfly.org ok 5 ok t/set-attrs.t ........ 1..3 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 '(person (name "jim") (phone_no "555-1111") (phone_no "555-2222")) '(person (name "jim") (phone_no "555-1111") (phone_no "555-2222") (phone_no "555-3333") (phone_no "555-4444")) '(dataset (person (name "jim") (phone_no "555-1111") (phone_no "555-2222") (phone_no "555-3333") (phone_no "555-4444")) (person (name "fred") (phone_no "555-5555"))) '(dataset (person (name "jim") (phone_no "555-1111") (phone_no "555-2222") (phone_no "555-3333") (phone_no "555-4444")) (person (name "fred") (phone_no "555-5555")) (person (name "fred") (phone_no "555-5555"))) jim 555-1111 555-2222 555-3333 555-4444 jim 555-1111 555-2222 555-3333 555-4444 ok 1 ok 2 ok 3 ok t/set.t .............. 1..2 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 detective Sherlock Holmes James Bond secret agent detective Sherlock Holmes
Great Britain 221B Baker Street London
James Bond secret agent ok 1 detective Sherlock Holmes
Great Britain 221B Baker Street London
James Bond secret agent ok 2 ok t/sxpr.t ............. 1..2 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 ok 1 ok 2 ok t/unhash.t ........... 1..4 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 James
NY Garden City The Manse 19 Chestnut Ln 11291
Hill 34 Sarah
10578 Hickory Street Katonah NY
James 30 James
NY Garden City The Manse 19 Chestnut Ln 11291
34 Hill
NY 10578 Katonah Hickory Street
Sarah James 30 The Manse 19 Chestnut Ln ok 1 Jill John Gerald blonde blue Fred blonde blue Jill John Gerald Fred Jill John Gerald ok 2 ok 3 ok 4 ok t/unset.t ............ 1..4 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok t/write.t ............ 1..1 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 about to write to t/data/test.sxpr written!! '(db (species_set (species (common_name "house mouse") (binomial "Mus musculus") (tax_id "10090")) (species (common_name "fruitfly") (binomial "Drosophila melanogaster") (tax_id "7227")) (species (common_name "human") (binomial "Homo sapiens") (tax_id "9606"))) (gene_set (gene (symbol "HGNC") (tax_id "9606") (phenotype "Hemochromatosis") (phenotype "Porphyria variegata") (GO_term "iron homeostasis") (map (cytological (chromosome "6") (band "p21.3")))) (gene (symbol "Hfe") (synonym "MR2") (tax_id "10090") (GO_term "integral membrane protein"))) (similarity_set (pair (symbol "HGNC") (symbol "Hfe")) (pair (symbol "WNT3A") (symbol "Wnt3a")))) ok 1 ok t/xml1.t ............. 1..7 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 shuggybus driver55 tamforklift driverchips ok 1 $VAR1 = { 'personset' => { 'person' => [ { 'name' => 'shuggy', 'age' => '55', 'job' => 'bus driver' }, { 'favourite_food' => 'chips', 'name' => 'tam', 'job' => 'forklift driver' } ] } }; shuggy bus driver 55 tam forklift driver chips shuggy bus driver 100 tam forklift driver chips checking.. shuggy bus driver 100 ok 2 ok 3 tam forklift driver chips ok 4 ok 5 ok 6 yyy tam forklift driver chips ok 7 ok t/xml2.t ............. 1..4 # Running under perl version 5.036000 for linux # Current time local: Fri Jun 23 06:05:39 2023 # Current time GMT: Thu Jun 22 16:05:39 2023 # Using Test.pm version 1.31 $VAR1 = bless( [ 'person', [ bless( [ 'name', 'davey' ], 'Data::Stag::StagImpl' ), bless( [ 'address', 'here' ], 'Data::Stag::StagImpl' ), bless( [ 'description', [ bless( [ 'hair', 'green' ], 'Data::Stag::StagImpl' ), bless( [ 'eyes', 'two' ], 'Data::Stag::StagImpl' ), bless( [ 'teeth', 5 ], 'Data::Stag::StagImpl' ) ] ], 'Data::Stag::StagImpl' ), bless( [ 'pets', [ bless( [ 'petname', 'igor' ], 'Data::Stag::StagImpl' ), bless( [ 'petname', 'ginger' ], 'Data::Stag::StagImpl' ) ] ], 'Data::Stag::StagImpl' ) ] ], 'Data::Stag::StagImpl' ); $VAR1 = bless( [ 'person', [ bless( [ 'name', 'shuggy' ], 'Data::Stag::StagImpl' ), bless( [ 'address', 'there' ], 'Data::Stag::StagImpl' ), bless( [ 'description', [ bless( [ 'hair', 'red' ], 'Data::Stag::StagImpl' ), bless( [ 'eyes', 'three' ], 'Data::Stag::StagImpl' ), bless( [ 'teeth', 1 ], 'Data::Stag::StagImpl' ) ] ], 'Data::Stag::StagImpl' ), bless( [ 'pets', [ bless( [ 'petname', 'thud' ], 'Data::Stag::StagImpl' ), bless( [ 'petname', 'spud' ], 'Data::Stag::StagImpl' ) ] ], 'Data::Stag::StagImpl' ) ] ], 'Data::Stag::StagImpl' ); shuggy
there
red three 1 thud spud desc green two 5 red three 1 ok 1 shuggy
there
red three 1 thud spud finding green haired people.. davey
here
green two 5 igor ginger ok 2 shuggy
there
red three 1 thud spud ok 3 '(a "") '(foo (bar "1")) ok 4 ok All tests successful. Files=20, Tests=102, 2 wallclock secs ( 0.15 usr 0.02 sys + 1.63 cusr 0.20 csys = 2.00 CPU) Result: PASS make[1]: Leaving directory '/build/libdata-stag-perl-0.14' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/libdata-stag-perl-0.14' dh_auto_install make -j7 install DESTDIR=/build/libdata-stag-perl-0.14/debian/libdata-stag-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[2]: Entering directory '/build/libdata-stag-perl-0.14' Manifying 20 pod documents Manifying 27 pod documents Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/XMLWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/XSLHandler.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/GraphHandler.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/BaseGenerator.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/null.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/XSLTHandler.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/PerlWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/ITextParser.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/JSONWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/BaseHandler.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/Writer.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/HashDB.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/StagI.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/IndentParser.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/StagImpl.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/SxprParser.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/XMLParser.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/StagDB.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/SAX2Stag.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/ChainHandler.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/Simple.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/Util.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/DTDWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/PodParser.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/Base.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/Arr2HTML.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/SxprWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/ITextWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/perl5/Data/Stag/IndentWriter.pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-join.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-merge.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-splitter.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-xml2itext.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-parse.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-findsubtree.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-itext2sxpr.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-autoschema.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-itext2xml.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-drawtree.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-handle.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-query.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-diff.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-db.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-filter.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-grep.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-mogrify.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-itext2simple.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-flatten.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/stag-view.pl.1p Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::DTDWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::Arr2HTML.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::HashDB.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::null.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::XSLTHandler.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::IndentWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::ITextParser.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::ITextWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::SxprParser.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::SAX2Stag.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::PerlWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::Writer.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::XSLHandler.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::BaseHandler.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::ChainHandler.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::GraphHandler.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::StagDB.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::Simple.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::JSONWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::XMLWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::SxprWriter.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::StagImpl.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::IndentParser.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::BaseGenerator.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::PodParser.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man3/Data::Stag::XMLParser.3pm Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-drawtree.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-view.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-diff.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-merge.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-mogrify.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-xml2itext.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-itext2simple.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-join.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-autoschema.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-itext2sxpr.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-findsubtree.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-parse.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-grep.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-splitter.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-handle.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-db.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-itext2xml.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-flatten.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-filter.pl Installing /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/stag-query.pl make[2]: Leaving directory '/build/libdata-stag-perl-0.14' file-rename 's/\.pl//' /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/bin/* file-rename 's/\.pl//' /build/libdata-stag-perl-0.14/debian/libdata-stag-perl/usr/share/man/man1/*1p* make[1]: Leaving directory '/build/libdata-stag-perl-0.14' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libdata-stag-perl' in '../libdata-stag-perl_0.14-3_all.deb'. dpkg-genbuildinfo --build=binary -O../libdata-stag-perl_0.14-3_i386.buildinfo dpkg-genchanges --build=binary -O../libdata-stag-perl_0.14-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/24765/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/24765/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/24765 and its subdirectories I: Current time: Fri Jun 23 06:05:47 +14 2023 I: pbuilder-time-stamp: 1687449947