I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 8 00:50:45 +14 2024 I: pbuilder-time-stamp: 1717757445 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [lambda-align_1.0.3-6.dsc] I: copying [./lambda-align_1.0.3.orig.tar.gz] I: copying [./lambda-align_1.0.3-6.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 9 05:33:49 2020 +14 gpgv: using RSA key 8451F9178172E7E2DC73F79551F84A8FECCA7E09 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lambda-align_1.0.3-6.dsc: no acceptable signature found dpkg-source: info: extracting lambda-align in lambda-align-1.0.3 dpkg-source: info: unpacking lambda-align_1.0.3.orig.tar.gz dpkg-source: info: unpacking lambda-align_1.0.3-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying set-seqan-cmake-dir.patch dpkg-source: info: applying force-link-rt-pthread.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/128847/tmp/hooks/D01_modify_environment starting debug: Running on ionos6-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 8 00:50 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/128847/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/128847/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=ae1cad79c8384861801b68caa1867d78 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=128847 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.w7QU7kMk/pbuilderrc_q3To --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.w7QU7kMk/b2 --logfile b2/build.log --extrapackages usrmerge lambda-align_1.0.3-6.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 24 2023 bash -rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 21 2022 cat -rwxr-xr-x 1 root root 79816 Sep 21 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 21 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 21 2022 chown -rwxr-xr-x 1 root root 162024 Sep 21 2022 cp -rwxr-xr-x 1 root root 136916 Jan 6 2023 dash -rwxr-xr-x 1 root root 137160 Sep 21 2022 date -rwxr-xr-x 1 root root 100364 Sep 21 2022 dd -rwxr-xr-x 1 root root 108940 Sep 21 2022 df -rwxr-xr-x 1 root root 162152 Sep 21 2022 dir -rwxr-xr-x 1 root root 87760 Mar 24 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 21 2022 echo -rwxr-xr-x 1 root root 41 Jan 25 2023 egrep -rwxr-xr-x 1 root root 34664 Sep 21 2022 false -rwxr-xr-x 1 root root 41 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 84272 Mar 24 2023 findmnt -rwsr-xr-x 1 root root 30240 Mar 23 2023 fusermount -rwxr-xr-x 1 root root 218680 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 20 2022 hostname -rwxr-xr-x 1 root root 75756 Sep 21 2022 ln -rwxr-xr-x 1 root root 55600 Mar 24 2023 login -rwxr-xr-x 1 root root 162152 Sep 21 2022 ls -rwxr-xr-x 1 root root 214568 Mar 24 2023 lsblk -rwxr-xr-x 1 root root 96328 Sep 21 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 21 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 21 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 24 2023 more -rwsr-xr-x 1 root root 58912 Mar 24 2023 mount -rwxr-xr-x 1 root root 13856 Mar 24 2023 mountpoint -rwxr-xr-x 1 root root 157932 Sep 21 2022 mv lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 21 2022 pwd lrwxrwxrwx 1 root root 4 Apr 24 2023 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 21 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 21 2022 rm -rwxr-xr-x 1 root root 51080 Sep 21 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 3 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 6 2023 sed lrwxrwxrwx 1 root root 9 Jun 8 00:50 sh -> /bin/bash -rwxr-xr-x 1 root root 38760 Sep 21 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 21 2022 stty -rwsr-xr-x 1 root root 83492 Mar 24 2023 su -rwxr-xr-x 1 root root 38792 Sep 21 2022 sync -rwxr-xr-x 1 root root 598456 Apr 7 2023 tar -rwxr-xr-x 1 root root 13860 Nov 3 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 21 2022 touch -rwxr-xr-x 1 root root 34664 Sep 21 2022 true -rwxr-xr-x 1 root root 17892 Mar 23 2023 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 24 2023 umount -rwxr-xr-x 1 root root 38760 Sep 21 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 21 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 24 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/128847/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), libseqan2-dev, cmake, zlib1g-dev, libbz2-dev, openssl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libseqan2-dev; however: Package libseqan2-dev is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on openssl; however: Package openssl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libbz2-dev{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libseqan2-dev{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} openssl{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 37.4 MB of archives. After unpacking 141 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 libproc2-0 i386 2:4.0.2-3 [63.7 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 procps i386 2:4.0.2-3 [706 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libarchive13 i386 3.6.2-1 [385 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-9 [420 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libjsoncpp25 i386 1.9.5-4 [86.2 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 librhash0 i386 1.4.3-3 [149 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 libuv1 i386 1.44.2-1 [147 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 cmake i386 3.25.1-1 [9767 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 libbz2-dev i386 1.0.8-5+b1 [31.5 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libseqan2-dev all 2.4.0+dfsg-15 [1215 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 openssl i386 3.0.8-1 [1412 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 zlib1g-dev i386 1:1.2.13.dfsg-1 [913 kB] Fetched 37.4 MB in 0s (91.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_i386.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../04-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_i386.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... 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I: Building the package I: user script /srv/workspace/pbuilder/128847/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... removed '/etc/unsupported-skip-usrmerge-conversion' The system has been successfully converted. I: user script /srv/workspace/pbuilder/128847/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/lambda-align-1.0.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lambda-align_1.0.3-6_source.changes dpkg-buildpackage: info: source package lambda-align dpkg-buildpackage: info: source version 1.0.3-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --builddirectory=build debian/rules override_dh_auto_clean make[1]: Entering directory '/build/lambda-align-1.0.3' rm -f *.1 dh_auto_clean -- make[1]: Leaving directory '/build/lambda-align-1.0.3' dh_autoreconf_clean -O--builddirectory=build dh_clean -O--builddirectory=build debian/rules build dh build --builddirectory=build dh_update_autotools_config -O--builddirectory=build dh_autoreconf -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/build/lambda-align-1.0.3' dh_auto_configure -- -DLAMBDA_NATIVE_BUILD=OFF -DLAMBDA_MMAPPED_DB=ON -DCMAKE_BUILD_TYPE=Release cd build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DLAMBDA_NATIVE_BUILD=OFF -DLAMBDA_MMAPPED_DB=ON -DCMAKE_BUILD_TYPE=Release .. Compiler Detection -- The CXX compiler identification is GNU 12.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Dependency detection -- These dependencies where found: OPENMP TRUE -fopenmp ZLIB TRUE 1.2.13 BZIP2 TRUE 1.0.8 SEQAN TRUE 2.4.0 -- The requirements where met. Build configuration -- LAMBDA version is: 1.0.2 -- The following options are selected for the build: LAMBDA_FASTBUILD OFF LAMBDA_LINGAPS_OPT OFF LAMBDA_MMAPPED_DB ON LAMBDA_NATIVE_BUILD OFF LAMBDA_STATIC_BUILD OFF -- Run 'cmake -LH' to get a comment on each option. -- Remove CMakeCache.txt and re-run cmake with -DOPTIONNAME=ON|OFF to change an option. Setting up unit tests -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/lambda-align-1.0.3/build make[1]: Leaving directory '/build/lambda-align-1.0.3' dh_auto_build -O--builddirectory=build cd build && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/lambda-align-1.0.3/build' /usr/bin/cmake -S/build/lambda-align-1.0.3 -B/build/lambda-align-1.0.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/lambda-align-1.0.3/build/CMakeFiles /build/lambda-align-1.0.3/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/build/lambda-align-1.0.3/build' cd /build/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lambda-align-1.0.3 /build/lambda-align-1.0.3/src /build/lambda-align-1.0.3/build /build/lambda-align-1.0.3/build/src /build/lambda-align-1.0.3/build/src/CMakeFiles/lambda.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/lambda-align-1.0.3/build' cd /build/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lambda-align-1.0.3 /build/lambda-align-1.0.3/src /build/lambda-align-1.0.3/build /build/lambda-align-1.0.3/build/src /build/lambda-align-1.0.3/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Leaving directory '/build/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/build/lambda-align-1.0.3/build' make[3]: Entering directory '/build/lambda-align-1.0.3/build' [ 25%] Building CXX object src/CMakeFiles/lambda.dir/lambda.cpp.o cd /build/lambda-align-1.0.3/build/src && /usr/bin/c++ -DCMAKE_BUILD_TYPE=\"Release\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -ffile-prefix-map=/build/lambda-align-1.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=18 -O3 -DNDEBUG -s -MD -MT src/CMakeFiles/lambda.dir/lambda.cpp.o -MF CMakeFiles/lambda.dir/lambda.cpp.o.d -o CMakeFiles/lambda.dir/lambda.cpp.o -c /build/lambda-align-1.0.3/src/lambda.cpp [ 50%] Building CXX object src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o cd /build/lambda-align-1.0.3/build/src && /usr/bin/c++ -DCMAKE_BUILD_TYPE=\"Release\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -ffile-prefix-map=/build/lambda-align-1.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=18 -O3 -DNDEBUG -s -MD -MT src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -MF CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o.d -o CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -c /build/lambda-align-1.0.3/src/lambda_indexer.cpp In file included from /build/lambda-align-1.0.3/src/lambda.cpp:32: /build/lambda-align-1.0.3/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 323 | setDate(parser, __DATE__); | ^~~~~~~~ In file included from /build/lambda-align-1.0.3/src/misc.hpp:34, from /build/lambda-align-1.0.3/src/lambda_indexer.hpp:35, from /build/lambda-align-1.0.3/src/lambda_indexer.cpp:31: /build/lambda-align-1.0.3/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 323 | setDate(parser, __DATE__); | ^~~~~~~~ In file included from /build/lambda-align-1.0.3/src/lambda_indexer.hpp:37: /build/lambda-align-1.0.3/src/radix_inplace.h:121:17: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 121 | public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/c++/12/ostream:38, from /usr/include/c++/12/iostream:39, from /usr/include/seqan/basic/debug_test_system.h:150, from /usr/include/seqan/basic/basic_debug.h:52, from /usr/include/seqan/basic.h:49, from /build/lambda-align-1.0.3/src/lambda_indexer.cpp:22: /usr/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/radix_inplace.h:145:17: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 145 | public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/lambda-align-1.0.3/src/lambda.cpp:34: /build/lambda-align-1.0.3/src/lambda.hpp:79:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 79 | public ::std::binary_function < TSav, TSav, bool > | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/c++/12/ostream:38, from /usr/include/c++/12/iostream:39, from /build/lambda-align-1.0.3/src/lambda.cpp:22: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score >; BlastProgram p = seqan::BlastProgram::BLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /build/lambda-align-1.0.3/src/output.hpp:25, from /build/lambda-align-1.0.3/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score >; BlastProgram p = seqan::BlastProgram::BLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score >; BlastProgram p = seqan::BlastProgram::BLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score >; BlastProgram p = seqan::BlastProgram::BLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score >; BlastProgram p = seqan::BlastProgram::BLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score >; BlastProgram p = seqan::BlastProgram::BLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:145:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:147:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTP, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTP; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTP]' /build/lambda-align-1.0.3/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTP; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::BLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::BLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTN, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTN]' /build/lambda-align-1.0.3/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTN; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /build/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, seqan::BlastProgram::TBLASTX, seqan::BlastTabularSpec::COMMENTS>, seqan::Tag >]' /build/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS; seqan::BlastProgram p = seqan::BlastProgram::TBLASTX]' /build/lambda-align-1.0.3/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' /build/lambda-align-1.0.3/src/lambda.cpp:149:24: required from here /build/lambda-align-1.0.3/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, BlastIOContext&) [with TBlastMatch = BlastMatch, Alloc<> >, InfixSegment>, Tag >, Gaps, MMap<> >, InfixSegment>, Tag >, unsigned int, Segment >, InfixSegment>, Segment >, InfixSegment>, std::vector >, String > >; TScore = Score, ScoreSpecSelectable> >; BlastProgram p = seqan::BlastProgram::TBLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] 1282 | computeEValue(bm, context(lH.gH.outfile)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here 1176 | computeEValue(TBlastMatch & match, | ^~~~~~~~~~~~~ /build/lambda-align-1.0.3/src/options.hpp: In function 'void getCwd(TString&) [with TString = std::__cxx11::basic_string]': /build/lambda-align-1.0.3/src/options.hpp:173:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | getcwd(cwd, 1000); | ~~~~~~^~~~~~~~~~~ /build/lambda-align-1.0.3/src/options.hpp: In function 'void getCwd(TString&) [with TString = std::__cxx11::basic_string]': /build/lambda-align-1.0.3/src/options.hpp:173:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | getcwd(cwd, 1000); | ~~~~~~^~~~~~~~~~~ [ 75%] Linking CXX executable ../bin/lambda_indexer cd /build/lambda-align-1.0.3/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda_indexer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/lambda-align-1.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=18 -O3 -DNDEBUG -s -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -o ../bin/lambda_indexer -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:18, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:11, inlined from '_toText' at /usr/include/seqan/arg_parse/arg_parse_ctd_support.h:88:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967248' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_toText': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:280:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:290:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function 'append': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign.constprop.isra' at /usr/include/seqan/pipe/pool_base.h:1369:42: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function 'assign.constprop.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/index/pipe_merger3.h:127:17, inlined from 'operator++' at /usr/include/seqan/index/index_skew3.h:329:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_counter.h:90:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign.constprop.isra' at /usr/include/seqan/pipe/pool_base.h:1369:42: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function 'assign.constprop.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/index/pipe_merger3.h:127:17, inlined from 'operator++' at /usr/include/seqan/index/index_skew3.h:329:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_counter.h:90:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign.constprop.isra' at /usr/include/seqan/pipe/pool_base.h:1369:42: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function 'assign.constprop.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ make[3]: Leaving directory '/build/lambda-align-1.0.3/build' [ 75%] Built target lambda_indexer [100%] Linking CXX executable ../bin/lambda cd /build/lambda-align-1.0.3/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/lambda-align-1.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=18 -O3 -DNDEBUG -s -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda.dir/lambda.cpp.o -o ../bin/lambda -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++.isra' at /usr/include/seqan/pipe/pipe_namer.h:114:13: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'operator++.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators.constprop' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_popIterators.constprop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators.constprop' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_popIterators.constprop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators.constprop' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_popIterators.constprop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators.constprop' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_popIterators.constprop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function 'append': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'pop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:280:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:290:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign.constprop.isra' at /usr/include/seqan/pipe/pool_base.h:1369:42: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function 'assign.constprop.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function 'operator++', inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:317:20: /usr/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 470 | outRef->i2.i[skipped++] = 0; | ^ /usr/include/seqan/basic/tuple_base.h: In member function 'process.isra': /usr/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'i' of size 7 141 | typename StoredTupleValue_::Type i[SIZE]; | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'insertStream': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'process.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingISY_S10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1I_ISW_SL_EES14_EEE_EEvRNS1H_INS1I_IT_S1F_EENS1I_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingISY_S10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1I_ISW_SL_EES14_EEE_EEvRNS1H_INS1I_IT_S1F_EENS1I_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingISY_S10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1I_ISW_SL_EES14_EEE_EEvRNS1H_INS1I_IT_S1F_EENS1I_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingISY_S10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1I_ISW_SL_EES14_EEE_EEvRNS1H_INS1I_IT_S1F_EENS1I_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++.isra' at /usr/include/seqan/index/pipe_merger3.h:127:17: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In member function 'operator++.isra': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingISY_S10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1I_ISW_SL_EES14_EEE_EEvRNS1H_INS1I_IT_S1F_EENS1I_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingISY_S10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1I_ISW_SL_EES14_EEE_EEvRNS1H_INS1I_IT_S1F_EENS1I_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators.constprop' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_popIterators.constprop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators.constprop' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_popIterators.constprop': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingIS11_S13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1L_ISX_SZ_EES17_EEE_EEvRNS1K_INS1L_IT_S1I_EENS1L_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:31, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:30, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:30: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ /usr/include/c++/12/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_12BlastReport_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/12/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ make[3]: Leaving directory '/build/lambda-align-1.0.3/build' [100%] Built target lambda make[2]: Leaving directory '/build/lambda-align-1.0.3/build' /usr/bin/cmake -E cmake_progress_start /build/lambda-align-1.0.3/build/CMakeFiles 0 make[1]: Leaving directory '/build/lambda-align-1.0.3/build' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --builddirectory=build dh_testroot -O--builddirectory=build dh_prep -O--builddirectory=build dh_auto_install --destdir=debian/lambda-align/ -O--builddirectory=build cd build && make -j15 install DESTDIR=/build/lambda-align-1.0.3/debian/lambda-align AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/lambda-align-1.0.3/build' /usr/bin/cmake -S/build/lambda-align-1.0.3 -B/build/lambda-align-1.0.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/lambda-align-1.0.3/build/CMakeFiles /build/lambda-align-1.0.3/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/build/lambda-align-1.0.3/build' cd /build/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lambda-align-1.0.3 /build/lambda-align-1.0.3/src /build/lambda-align-1.0.3/build /build/lambda-align-1.0.3/build/src /build/lambda-align-1.0.3/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/lambda-align-1.0.3/build' cd /build/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lambda-align-1.0.3 /build/lambda-align-1.0.3/src /build/lambda-align-1.0.3/build /build/lambda-align-1.0.3/build/src /build/lambda-align-1.0.3/build/src/CMakeFiles/lambda.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Leaving directory '/build/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/build/lambda-align-1.0.3/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda.dir/build'. make[3]: Leaving directory '/build/lambda-align-1.0.3/build' make[3]: Entering directory '/build/lambda-align-1.0.3/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda_indexer.dir/build'. make[3]: Leaving directory '/build/lambda-align-1.0.3/build' [ 50%] Built target lambda [100%] Built target lambda_indexer make[2]: Leaving directory '/build/lambda-align-1.0.3/build' /usr/bin/cmake -E cmake_progress_start /build/lambda-align-1.0.3/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/lambda-align-1.0.3/build' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/lambda-align-1.0.3/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/lambda-align-1.0.3/debian/lambda-align/usr/bin/lambda -- Installing: /build/lambda-align-1.0.3/debian/lambda-align/usr/bin/lambda_indexer -- Installing: /build/lambda-align-1.0.3/debian/lambda-align/usr/share/doc/lambda/LICENSE.rst -- Installing: /build/lambda-align-1.0.3/debian/lambda-align/usr/share/doc/lambda/LICENSE-BSD.rst -- Installing: /build/lambda-align-1.0.3/debian/lambda-align/usr/share/doc/lambda/LICENSE-GPL3.rst -- Installing: /build/lambda-align-1.0.3/debian/lambda-align/usr/share/doc/lambda/README.rst make[1]: Leaving directory '/build/lambda-align-1.0.3/build' debian/rules override_dh_install make[1]: Entering directory '/build/lambda-align-1.0.3' dh_install find debian -name "LICENSE*.rst" -delete make[1]: Leaving directory '/build/lambda-align-1.0.3' dh_installdocs -O--builddirectory=build dh_installchangelogs -O--builddirectory=build debian/rules override_dh_installman make[1]: Entering directory '/build/lambda-align-1.0.3' ./build/bin/lambda --export-help man \ | sed -r 's/(number of threads.*) Default:.*/\1/g' \ | sed -r 's/\(Git commit +\)//g' > lambda.1 mkdir: cannot create directory '/nonexistent': Permission denied ./build/bin/lambda_indexer --export-help man \ | sed -r 's/(number of threads.*) Default:.*/\1/g' \ | sed -r 's/(defaults to working directory.*) Default:.*/\1/g' \ | sed -r 's/\(Git commit +\)//g' > lambda_indexer.1 mkdir: cannot create directory '/nonexistent': Permission denied dh_installman -- make[1]: Leaving directory '/build/lambda-align-1.0.3' dh_installinit -O--builddirectory=build dh_installsystemduser -O--builddirectory=build dh_perl -O--builddirectory=build dh_link -O--builddirectory=build dh_strip_nondeterminism -O--builddirectory=build dh_compress -O--builddirectory=build dh_fixperms -O--builddirectory=build dh_missing -O--builddirectory=build dh_dwz -O--builddirectory=build dwz: debian/lambda-align/usr/bin/lambda: .debug_info section not present dwz: debian/lambda-align/usr/bin/lambda_indexer: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -O--builddirectory=build dh_makeshlibs -O--builddirectory=build dh_shlibdeps -O--builddirectory=build dh_installdeb -O--builddirectory=build dh_gencontrol -O--builddirectory=build dh_md5sums -O--builddirectory=build dh_builddeb -O--builddirectory=build dpkg-deb: building package 'lambda-align' in '../lambda-align_1.0.3-6_i386.deb'. dpkg-genbuildinfo --build=binary -O../lambda-align_1.0.3-6_i386.buildinfo dpkg-genchanges --build=binary -O../lambda-align_1.0.3-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/128847/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/128847/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/128847 and its subdirectories I: Current time: Sat Jun 8 00:53:27 +14 2024 I: pbuilder-time-stamp: 1717757607