I: pbuilder: network access will be disabled during build I: Current time: Wed May 15 23:02:25 +14 2024 I: pbuilder-time-stamp: 1715763745 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libwfa2_2.3.3-1.dsc] I: copying [./libwfa2_2.3.3.orig.tar.gz] I: copying [./libwfa2_2.3.3-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Feb 27 06:34:11 2023 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libwfa2_2.3.3-1.dsc: no acceptable signature found dpkg-source: info: extracting libwfa2 in libwfa2-2.3.3 dpkg-source: info: unpacking libwfa2_2.3.3.orig.tar.gz dpkg-source: info: unpacking libwfa2_2.3.3-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16044/tmp/hooks/D01_modify_environment starting debug: Running on codethink11-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash lrwxrwxrwx 1 root root 4 Jan 6 2023 /bin/sh -> dash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/16044/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/16044/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME='pbuilder2' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='nl_BE:nl' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16044' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ClDvLzOu/pbuilderrc_pTus --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ClDvLzOu/b2 --logfile b2/build.log --extrapackages usrmerge libwfa2_2.3.3-1.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT-14' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux i-capture-the-hostname 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 13 06:50 /bin -> usr/bin I: user script /srv/workspace/pbuilder/16044/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), d-shlibs, cmake, pkg-config dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 53 newly installed, 0 to remove and 0 not upgraded. Need to get 30.0 MB of archives. After unpacking 120 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libproc2-0 arm64 2:4.0.2-3 [60.1 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 procps arm64 2:4.0.2-3 [698 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.1+b3 [619 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libarchive13 arm64 3.6.2-1 [316 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-7 [361 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libjsoncpp25 arm64 1.9.5-4 [72.3 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 librhash0 arm64 1.4.3-3 [131 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 libuv1 arm64 1.44.2-1 [133 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 cmake arm64 3.25.1-1 [6806 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 d-shlibs all 0.104 [18.6 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 42 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 44 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 libpkgconf3 arm64 1.8.1-1 [35.3 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 pkgconf-bin arm64 1.8.1-1 [28.9 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 pkgconf arm64 1.8.1-1 [25.9 kB] Get: 53 http://deb.debian.org/debian bookworm/main arm64 pkg-config arm64 1.8.1-1 [13.7 kB] Fetched 30.0 MB in 4s (7599 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_arm64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../04-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../10-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../17-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.1+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.1+b3) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../19-libarchive13_3.6.2-1_arm64.deb ... Unpacking libarchive13:arm64 (3.6.2-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../20-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../21-libsasl2-modules-db_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../22-libsasl2-2_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../23-libldap-2.5-0_2.5.13+dfsg-5_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../24-libnghttp2-14_1.52.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.52.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../25-libpsl5_0.21.2-1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.2-1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../26-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../27-libssh2-1_1.10.0-3+b1_arm64.deb ... Unpacking libssh2-1:arm64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../28-libcurl4_7.88.1-7_arm64.deb ... Unpacking libcurl4:arm64 (7.88.1-7) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../29-libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package libjsoncpp25:arm64. Preparing to unpack .../30-libjsoncpp25_1.9.5-4_arm64.deb ... Unpacking libjsoncpp25:arm64 (1.9.5-4) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../31-librhash0_1.4.3-3_arm64.deb ... Unpacking librhash0:arm64 (1.4.3-3) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../32-libuv1_1.44.2-1_arm64.deb ... Unpacking libuv1:arm64 (1.44.2-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../33-cmake-data_3.25.1-1_all.deb ... Unpacking cmake-data (3.25.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../34-cmake_3.25.1-1_arm64.deb ... Unpacking cmake (3.25.1-1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../35-d-shlibs_0.104_all.deb ... Unpacking d-shlibs (0.104) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../36-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../37-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../38-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../39-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../40-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../41-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../42-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../43-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../44-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package gettext. Preparing to unpack .../45-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../46-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../47-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../48-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package libpkgconf3:arm64. Preparing to unpack .../49-libpkgconf3_1.8.1-1_arm64.deb ... Unpacking libpkgconf3:arm64 (1.8.1-1) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../50-pkgconf-bin_1.8.1-1_arm64.deb ... Unpacking pkgconf-bin (1.8.1-1) ... Selecting previously unselected package pkgconf:arm64. Preparing to unpack .../51-pkgconf_1.8.1-1_arm64.deb ... Unpacking pkgconf:arm64 (1.8.1-1) ... Selecting previously unselected package pkg-config:arm64. Preparing to unpack .../52-pkg-config_1.8.1-1_arm64.deb ... Unpacking pkg-config:arm64 (1.8.1-1) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libpsl5:arm64 (0.21.2-1) ... Setting up libicu72:arm64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b6) ... Setting up libnghttp2-14:arm64 (1.52.0-1) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:arm64 (1.8.1-1) ... Setting up libuv1:arm64 (1.44.2-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libproc2-0:arm64 (2:4.0.2-3) ... Setting up autopoint (0.21-12) ... Setting up libjsoncpp25:arm64 (1.9.5-4) ... Setting up d-shlibs (0.104) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-10) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up librhash0:arm64 (1.4.3-3) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.1+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:arm64 (3.6.2-1) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Setting up pkgconf:arm64 (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up pkg-config:arm64 (1.8.1-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:arm64 (7.88.1-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up cmake (3.25.1-1) ... Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-8) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... usrmerge is already the newest version (35). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/16044/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... I: user script /srv/workspace/pbuilder/16044/tmp/hooks/A99_set_merged_usr finished hostname: Temporary failure in name resolution I: Running cd /build/libwfa2-2.3.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libwfa2_2.3.3-1_source.changes dpkg-buildpackage: info: source package libwfa2 dpkg-buildpackage: info: source version 2.3.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/libwfa2-2.3.3/obj-aarch64-linux-gnu dh_auto_build -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/libwfa2-2.3.3 -B/build/libwfa2-2.3.3/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libwfa2-2.3.3/obj-aarch64-linux-gnu/CMakeFiles /build/libwfa2-2.3.3/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan make -f CMakeFiles/wfa2_static.dir/build.make CMakeFiles/wfa2_static.dir/depend make -f CMakeFiles/wfa2.dir/build.make CMakeFiles/wfa2.dir/depend make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/libwfa2-2.3.3/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 /build/libwfa2-2.3.3/obj-aarch64-linux-gnu /build/libwfa2-2.3.3/obj-aarch64-linux-gnu /build/libwfa2-2.3.3/obj-aarch64-linux-gnu/CMakeFiles/wfa2_static.dir/DependInfo.cmake --color= make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/libwfa2-2.3.3/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 /build/libwfa2-2.3.3/obj-aarch64-linux-gnu /build/libwfa2-2.3.3/obj-aarch64-linux-gnu /build/libwfa2-2.3.3/obj-aarch64-linux-gnu/CMakeFiles/wfa2.dir/DependInfo.cmake --color= make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten make -f CMakeFiles/wfa2.dir/build.make CMakeFiles/wfa2.dir/build make -f CMakeFiles/wfa2_static.dir/build.make CMakeFiles/wfa2_static.dir/build make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan [ 4%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o [ 4%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o [ 4%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_aligner.c.o [ 4%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_align.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_aligner.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_aligner.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_aligner.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_aligner.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_align.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_align.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_align.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_align.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_align.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o -c 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-DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_aligner.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_attributes.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_attributes.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_attributes.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_attributes.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_attributes.c [ 10%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat 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/usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_bialigner.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_bialigner.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_bialigner.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_bialigner.c [ 17%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_bialign.c [ 19%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_bialigner.c [ 20%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront.c [ 21%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront.c [ 22%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_components.c [ 23%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_affine2p.c [ 25%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_affine2p.c [ 26%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_components.c [ 28%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine.c.o [ 28%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. 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-I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_linear.c [ 34%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o.d -o 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-I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_debug.c [ 38%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_debug.c [ 39%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_display.c [ 40%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_display.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security 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-DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_pcigar.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o -c 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/usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_plot.c [ 53%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o -MF 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-DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o -MF CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o.d -o CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o -c /build/libwfa2-2.3.3/utils/sequence_buffer.c [ 73%] Building C object CMakeFiles/wfa2_static.dir/utils/vector.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/vector.c.o -MF CMakeFiles/wfa2_static.dir/utils/vector.c.o.d -o CMakeFiles/wfa2_static.dir/utils/vector.c.o -c 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CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o -MF CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o.d -o CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o -c /build/libwfa2-2.3.3/utils/sequence_buffer.c [ 77%] Building C object CMakeFiles/wfa2.dir/utils/vector.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/vector.c.o -MF CMakeFiles/wfa2.dir/utils/vector.c.o.d -o CMakeFiles/wfa2.dir/utils/vector.c.o -c /build/libwfa2-2.3.3/utils/vector.c [ 78%] Building C object CMakeFiles/wfa2_static.dir/utils/heatmap.c.o [ 79%] Building C object CMakeFiles/wfa2_static.dir/utils/string_padded.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/heatmap.c.o -MF CMakeFiles/wfa2_static.dir/utils/heatmap.c.o.d -o CMakeFiles/wfa2_static.dir/utils/heatmap.c.o -c /build/libwfa2-2.3.3/utils/heatmap.c [ 80%] Building C object CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o -MF CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o.d -o CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o -c /build/libwfa2-2.3.3/alignment/affine2p_penalties.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/string_padded.c.o -MF CMakeFiles/wfa2_static.dir/utils/string_padded.c.o.d -o CMakeFiles/wfa2_static.dir/utils/string_padded.c.o -c /build/libwfa2-2.3.3/utils/string_padded.c [ 82%] Building C object CMakeFiles/wfa2_static.dir/alignment/affine_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/alignment/affine_penalties.c.o -MF 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-ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o -MF CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o.d -o CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o -c /build/libwfa2-2.3.3/alignment/score_matrix.c [ 85%] Building C object CMakeFiles/wfa2.dir/utils/commons.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/commons.c.o -MF CMakeFiles/wfa2.dir/utils/commons.c.o.d -o CMakeFiles/wfa2.dir/utils/commons.c.o -c /build/libwfa2-2.3.3/utils/commons.c [ 86%] Building C object CMakeFiles/wfa2.dir/utils/heatmap.c.o /usr/bin/cc -DVERSION=\"v2.3\" 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-I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/alignment/score_matrix.c.o -MF CMakeFiles/wfa2.dir/alignment/score_matrix.c.o.d -o CMakeFiles/wfa2.dir/alignment/score_matrix.c.o -c /build/libwfa2-2.3.3/alignment/score_matrix.c [ 94%] Linking C static library libwfa2.a /usr/bin/cmake -P CMakeFiles/wfa2_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/wfa2_static.dir/link.txt --verbose=1 /usr/bin/ar qc libwfa2.a CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_attributes.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_buffer.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace.c.o 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CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_unialign.c.o CMakeFiles/wfa2_static.dir/system/mm_stack.c.o CMakeFiles/wfa2_static.dir/system/mm_allocator.c.o CMakeFiles/wfa2_static.dir/system/profiler_counter.c.o CMakeFiles/wfa2_static.dir/system/profiler_timer.c.o CMakeFiles/wfa2_static.dir/utils/bitmap.c.o CMakeFiles/wfa2_static.dir/utils/dna_text.c.o CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o CMakeFiles/wfa2_static.dir/utils/vector.c.o CMakeFiles/wfa2_static.dir/utils/commons.c.o CMakeFiles/wfa2_static.dir/utils/heatmap.c.o CMakeFiles/wfa2_static.dir/utils/string_padded.c.o CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o CMakeFiles/wfa2_static.dir/alignment/affine_penalties.c.o CMakeFiles/wfa2_static.dir/alignment/cigar.c.o CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o /usr/bin/ranlib libwfa2.a make[3]: Map 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CMakeFiles/wfa2.dir/utils/dna_text.c.o CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o CMakeFiles/wfa2.dir/utils/vector.c.o CMakeFiles/wfa2.dir/utils/commons.c.o CMakeFiles/wfa2.dir/utils/heatmap.c.o CMakeFiles/wfa2.dir/utils/string_padded.c.o CMakeFiles/wfa2.dir/alignment/affine2p_penalties.c.o CMakeFiles/wfa2.dir/alignment/affine_penalties.c.o CMakeFiles/wfa2.dir/alignment/cigar.c.o CMakeFiles/wfa2.dir/alignment/score_matrix.c.o /usr/bin/cmake -E cmake_symlink_library libwfa2.so.0 libwfa2.so.0 libwfa2.so make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten [ 95%] Built target wfa2 make -f CMakeFiles/wfa2cpp_static.dir/build.make CMakeFiles/wfa2cpp_static.dir/depend make -f CMakeFiles/wfa2cpp.dir/build.make CMakeFiles/wfa2cpp.dir/depend make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/libwfa2-2.3.3/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 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'/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan [ 96%] Building CXX object CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o /usr/bin/c++ -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2cpp_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=gnu++17 -MD -MT CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o -MF CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o.d -o CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o -c /build/libwfa2-2.3.3/bindings/cpp/WFAligner.cpp [ 97%] Building CXX object CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o /usr/bin/c++ -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong 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CMakeFiles/wfa2cpp_static.dir/link.txt --verbose=1 /usr/bin/ar qc libwfa2cpp.a CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o /usr/bin/ranlib libwfa2cpp.a make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target wfa2cpp_static /usr/bin/cmake -E cmake_symlink_library libwfa2cpp.so.0 libwfa2cpp.so.0 libwfa2cpp.so make[3]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target wfa2cpp make[2]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/cmake -E cmake_progress_start /build/libwfa2-2.3.3/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten dh_auto_test -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 test ARGS\+=--verbose ARGS\+=-j8 make[1]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j8 UpdateCTestConfiguration from :/build/libwfa2-2.3.3/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/libwfa2-2.3.3/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/libwfa2-2.3.3/obj-aarch64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: wfa2lib 1: Test command: /build/libwfa2-2.3.3/tests/wfa.utest.sh 1: Working Directory: /build/libwfa2-2.3.3 1: Test timeout computed to be: 10000000 1: + BIN=./bin/align_benchmark 1: + INPUT=./tests/wfa.utest.seq 1: + OUTPUT=./tests 1: + LOG=./tests/wfa.utest.log 1: + rm './tests/*.alg' './tests/*.log*' 1: rm: kan './tests/*.alg' niet verwijderen: Bestand of map bestaat niet 1: rm: kan './tests/*.log*' niet verwijderen: Bestand of map bestaat niet 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- --check=correct test 1: + IFS=' ' 1: + MODE=--check=correct 1: + PREFIX=test 1: + echo '>>> Testing '\''test'\'' (--check=correct)' 1: >>> Testing 'test' (--check=correct) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.indel.alg -a indel-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.edit.alg -a edit-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.alg -a gap-affine-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine2p.alg -a gap-affine2p-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p0.alg -a gap-affine-wfa --check=correct --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p1.alg -a gap-affine-wfa --check=correct --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p2.alg -a gap-affine-wfa --check=correct --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p3.alg -a gap-affine-wfa --check=correct --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p4.alg -a gap-affine-wfa --check=correct --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p5.alg -a gap-affine-wfa --check=correct --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.wfapt0.alg -a gap-affine-wfa --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.wfapt1.alg -a gap-affine-wfa --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- --wfa-score-only test.score 1: + IFS=' ' 1: + MODE=--wfa-score-only 1: + PREFIX=test.score 1: + echo '>>> Testing '\''test.score'\'' (--wfa-score-only)' 1: >>> Testing 'test.score' (--wfa-score-only) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.indel.alg -a indel-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.edit.alg -a edit-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.alg -a gap-affine-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine2p.alg -a gap-affine2p-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p0.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p1.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p2.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p3.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p4.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p5.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.wfapt0.alg -a gap-affine-wfa --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.wfapt1.alg -a gap-affine-wfa --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- '--wfa-memory-mode=med --check=correct' test.pb 1: + IFS=' ' 1: + MODE='--wfa-memory-mode=med --check=correct' 1: + PREFIX=test.pb 1: + echo '>>> Testing '\''test.pb'\'' (--wfa-memory-mode=med --check=correct)' 1: >>> Testing 'test.pb' (--wfa-memory-mode=med --check=correct) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.indel.alg -a indel-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.edit.alg -a edit-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine2p.alg -a gap-affine2p-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p0.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p1.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p2.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p3.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p4.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p5.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.wfapt0.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.wfapt1.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- '--wfa-memory-mode=ultralow --check=correct' test.biwfa 1: + IFS=' ' 1: + MODE='--wfa-memory-mode=ultralow --check=correct' 1: + PREFIX=test.biwfa 1: + echo '>>> Testing '\''test.biwfa'\'' (--wfa-memory-mode=ultralow --check=correct)' 1: >>> Testing 'test.biwfa' (--wfa-memory-mode=ultralow --check=correct) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.indel.alg -a indel-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.edit.alg -a edit-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine2p.alg -a gap-affine2p-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p2.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p3.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p4.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p5.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.wfapt0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.wfapt1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- '--wfa-memory-mode=ultralow --wfa-score-only' test.biwfa.score 1: + IFS=' ' 1: + MODE='--wfa-memory-mode=ultralow --wfa-score-only' 1: + PREFIX=test.biwfa.score 1: + echo '>>> Testing '\''test.biwfa.score'\'' (--wfa-memory-mode=ultralow --wfa-score-only)' 1: >>> Testing 'test.biwfa.score' (--wfa-memory-mode=ultralow --wfa-score-only) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.indel.alg -a indel-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.edit.alg -a edit-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine2p.alg -a gap-affine2p-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p2.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p3.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p4.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p5.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.wfapt0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.wfapt1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + diff tests/wfa.utest.check/test.edit.alg tests/wfa.utest.check/test.pb.edit.alg 1: + diff tests/wfa.utest.check/test.indel.alg tests/wfa.utest.check/test.pb.indel.alg 1: + diff tests/wfa.utest.check/test.affine.alg tests/wfa.utest.check/test.pb.affine.alg 1: + diff tests/wfa.utest.check/test.affine2p.alg tests/wfa.utest.check/test.pb.affine2p.alg 1: + diff tests/wfa.utest.check/test.affine.p0.alg tests/wfa.utest.check/test.pb.affine.p0.alg 1: + diff tests/wfa.utest.check/test.affine.p1.alg tests/wfa.utest.check/test.pb.affine.p1.alg 1: + diff tests/wfa.utest.check/test.affine.p2.alg tests/wfa.utest.check/test.pb.affine.p2.alg 1: + diff tests/wfa.utest.check/test.affine.p3.alg tests/wfa.utest.check/test.pb.affine.p3.alg 1: + diff tests/wfa.utest.check/test.affine.p4.alg tests/wfa.utest.check/test.pb.affine.p4.alg 1: + diff tests/wfa.utest.check/test.affine.p5.alg tests/wfa.utest.check/test.pb.affine.p5.alg 1: + diff tests/wfa.utest.check/test.affine.wfapt0.alg tests/wfa.utest.check/test.pb.affine.wfapt0.alg 1: + diff tests/wfa.utest.check/test.affine.wfapt1.alg tests/wfa.utest.check/test.pb.affine.wfapt1.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.edit.alg tests/wfa.utest.check/test.biwfa.edit.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.indel.alg tests/wfa.utest.check/test.biwfa.indel.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.alg tests/wfa.utest.check/test.biwfa.affine.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine2p.alg tests/wfa.utest.check/test.biwfa.affine2p.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p0.alg tests/wfa.utest.check/test.biwfa.affine.p0.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p1.alg tests/wfa.utest.check/test.biwfa.affine.p1.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p2.alg tests/wfa.utest.check/test.biwfa.affine.p2.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p3.alg tests/wfa.utest.check/test.biwfa.affine.p3.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p4.alg tests/wfa.utest.check/test.biwfa.affine.p4.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p5.alg tests/wfa.utest.check/test.biwfa.affine.p5.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.wfapt0.alg tests/wfa.utest.check/test.biwfa.affine.wfapt0.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.wfapt1.alg tests/wfa.utest.check/test.biwfa.affine.wfapt1.alg 1: + grep Alignments.Correct ./tests/wfa.utest.log 1: + grep Time.Alignment ./tests/wfa.utest.log 1: + awk '{if ($4 != "ms") print $3" "$4}' 1: + sort -n 1: + grep 'Maximum resident set size' ./tests/wfa.utest.log 1: + awk '{print $6}' 1: + sort -n 1: + echo -n '>>> Correct: ' 1: >>> Correct: + tail -n 4 ./tests/wfa.utest.log.time ./tests/wfa.utest.check/wfa.utest.log.time 1: ==> ./tests/wfa.utest.log.time <== 1: 1: ==> ./tests/wfa.utest.check/wfa.utest.log.time <== 1: 4.01 s 1: 5.01 s 1: 7.65 s 1: 13.33 s 1: + tail -n 4 ./tests/wfa.utest.log.mem ./tests/wfa.utest.check/wfa.utest.log.mem 1: ==> ./tests/wfa.utest.log.mem <== 1: 1: ==> ./tests/wfa.utest.check/wfa.utest.log.mem <== 1: 414740 1: 566220 1: 827568 1: 1783148 1: + ./tests/wfa.utest.cmp.sh ./tests ./tests/wfa.utest.check 1: > Comparing ./tests vs ./tests/wfa.utest.check 1: [UTest::*] ./tests/wfa.utest.check/*.alg doesn't exist. 1: + grep 'Exit status:' ./tests/wfa.utest.log 1: + sort 1: + uniq -c 1: + grep 'Command terminated by signal' ./tests/wfa.utest.log 1: + sort 1: + uniq -c 1: + cat ./tests/wfa.utest.log.correct 1: + awk '{print $5$6}' 1: + sort 1: + uniq -c 1/1 Test #1: wfa2lib .......................... Passed 0.20 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.20 sec make[1]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/libwfa2-2.3.3/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/libwfa2-2.3.3 -B/build/libwfa2-2.3.3/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt binnengegaan make[2]: Er hoeft niets gedaan te worden voor 'preinstall'. make[2]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2.a -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2.so.0 -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2.so -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_align.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_aligner.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_attributes.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_backtrace.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_backtrace_buffer.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_backtrace_offload.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_bialign.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_bialigner.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_components.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_affine.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_affine2p.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_edit.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_linear.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_debug.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_display.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_extend.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_heuristic.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_offset.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_pcigar.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_plot.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_slab.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_unialign.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wfa.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wfa.hpp -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/bitmap.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/commons.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/dna_text.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/heatmap.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/sequence_buffer.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/string_padded.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/vector.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/affine2p_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/affine_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/cigar.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/linear_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/score_matrix.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/mm_allocator.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/mm_stack.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/profiler_counter.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/profiler_timer.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2cpp.so.0 -- Set runtime path of "/build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2cpp.so.0" to "" -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2cpp.so -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2cpp.a -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/bindings/cpp/WFAligner.hpp make[1]: Map '/build/libwfa2-2.3.3/obj-aarch64-linux-gnu' wordt verlaten debian/rules override_dh_install make[1]: Map '/build/libwfa2-2.3.3' wordt binnengegaan dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include usr \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libwfa2-dev/usr/lib/aarch64-linux-gnu install -d -m 755 debian/libwfa2-0/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2.a debian/libwfa2-dev/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2.so debian/libwfa2-dev/usr/lib/aarch64-linux-gnu mv /build/libwfa2-2.3.3/debian/tmp/usr/lib/aarch64-linux-gnu/libwfa2.so.0 debian/libwfa2-0/usr/lib/aarch64-linux-gnu PKGDEV=libwfa2-dev PKGSHL=libwfa2-0 install -d -m 755 debian/libwfa2-dev/usr mv debian/tmp/usr/include debian/libwfa2-dev/usr make[1]: Map '/build/libwfa2-2.3.3' wordt verlaten dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dpkg-shlibdeps: warning: symbol sqrt used by debian/libwfa2-0/usr/lib/aarch64-linux-gnu/libwfa2.so.0 found in none of the libraries dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: Depends field of package libwfa2-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: pakket 'libwfa2-0-dbgsym' wordt gebouwd in '../libwfa2-0-dbgsym_2.3.3-1_arm64.deb'. dpkg-deb: pakket 'libwfa2-0' wordt gebouwd in '../libwfa2-0_2.3.3-1_arm64.deb'. dpkg-deb: pakket 'libwfa2-dev' wordt gebouwd in '../libwfa2-dev_2.3.3-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libwfa2_2.3.3-1_arm64.buildinfo dpkg-genchanges --build=binary -O../libwfa2_2.3.3-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/16044/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/16044/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16044 and its subdirectories I: Current time: Wed May 15 23:03:20 +14 2024 I: pbuilder-time-stamp: 1715763800