I: pbuilder: network access will be disabled during build I: Current time: Sun May 26 01:36:50 +14 2024 I: pbuilder-time-stamp: 1716637010 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-cran-glmmtmb_1.1.5+dfsg-4.dsc] I: copying [./r-cran-glmmtmb_1.1.5+dfsg.orig.tar.xz] I: copying [./r-cran-glmmtmb_1.1.5+dfsg-4.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Feb 9 00:39:13 2023 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./r-cran-glmmtmb_1.1.5+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting r-cran-glmmtmb in r-cran-glmmtmb-1.1.5+dfsg dpkg-source: info: unpacking r-cran-glmmtmb_1.1.5+dfsg.orig.tar.xz dpkg-source: info: unpacking r-cran-glmmtmb_1.1.5+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-autopkgtest.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/768810/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 May 26 01:37 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/768810/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/768810/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=0346755f4ddd41f28823841afd026eda LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=768810 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kifHLvFa/pbuilderrc_eqc1 --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kifHLvFa/b2 --logfile b2/build.log --extrapackages usrmerge r-cran-glmmtmb_1.1.5+dfsg-4.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Feb 13 2023 bash -rwxr-xr-x 3 root root 39224 Sep 19 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 19 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 21 2022 cat -rwxr-xr-x 1 root root 68656 Sep 21 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 21 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 21 2022 chown -rwxr-xr-x 1 root root 151152 Sep 21 2022 cp -rwxr-xr-x 1 root root 125640 Jan 6 2023 dash -rwxr-xr-x 1 root root 121904 Sep 21 2022 date -rwxr-xr-x 1 root root 89240 Sep 21 2022 dd -rwxr-xr-x 1 root root 102200 Sep 21 2022 df -rwxr-xr-x 1 root root 151344 Sep 21 2022 dir -rwxr-xr-x 1 root root 88656 Mar 24 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 21 2022 echo -rwxr-xr-x 1 root root 41 Jan 25 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 21 2022 false -rwxr-xr-x 1 root root 41 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 24 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 23 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 10 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 20 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 21 2022 ln -rwxr-xr-x 1 root root 53024 Mar 24 2023 login -rwxr-xr-x 1 root root 151344 Sep 21 2022 ls -rwxr-xr-x 1 root root 207168 Mar 24 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 21 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 21 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 21 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 24 2023 more -rwsr-xr-x 1 root root 59704 Mar 24 2023 mount -rwxr-xr-x 1 root root 18744 Mar 24 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 21 2022 mv lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 21 2022 pwd lrwxrwxrwx 1 root root 4 Feb 13 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 21 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 21 2022 rm -rwxr-xr-x 1 root root 56240 Sep 21 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 3 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 6 2023 sed lrwxrwxrwx 1 root root 9 May 26 01:37 sh -> /bin/bash -rwxr-xr-x 1 root root 43888 Sep 21 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 21 2022 stty -rwsr-xr-x 1 root root 72000 Mar 24 2023 su -rwxr-xr-x 1 root root 39824 Sep 21 2022 sync -rwxr-xr-x 1 root root 531984 Apr 7 2023 tar -rwxr-xr-x 1 root root 14520 Nov 3 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 21 2022 touch -rwxr-xr-x 1 root root 35664 Sep 21 2022 true -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 24 2023 umount -rwxr-xr-x 1 root root 43888 Sep 21 2022 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 21 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 24 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/768810/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-tmb (>= 1.9.0), r-cran-lme4, r-cran-matrix, r-cran-nlme, r-cran-numderiv, r-cran-rcppeigen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-cran-tmb (>= 1.9.0); however: Package r-cran-tmb is not installed. pbuilder-satisfydepends-dummy depends on r-cran-lme4; however: Package r-cran-lme4 is not installed. pbuilder-satisfydepends-dummy depends on r-cran-matrix; however: Package r-cran-matrix is not installed. pbuilder-satisfydepends-dummy depends on r-cran-nlme; however: Package r-cran-nlme is not installed. pbuilder-satisfydepends-dummy depends on r-cran-numderiv; however: Package r-cran-numderiv is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppeigen; however: Package r-cran-rcppeigen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcurl3-gnutls{a} libcurl4{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-12-dev{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnghttp2-14{a} libnlopt0{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpcre3{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libreadline-dev{a} libreadline8{a} libregexp-ipv6-perl{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsm6{a} libssh2-1{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6{a} littler{a} m4{a} man-db{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-cran-boot{a} r-cran-brio{a} r-cran-callr{a} r-cran-cli{a} r-cran-crayon{a} r-cran-desc{a} r-cran-diffobj{a} r-cran-digest{a} r-cran-ellipsis{a} r-cran-evaluate{a} r-cran-fansi{a} r-cran-fs{a} r-cran-glue{a} r-cran-jsonlite{a} r-cran-lattice{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-lme4{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-minqa{a} r-cran-nlme{a} r-cran-nloptr{a} r-cran-numderiv{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-pkgload{a} r-cran-praise{a} r-cran-processx{a} r-cran-ps{a} r-cran-r6{a} r-cran-rcpp{a} r-cran-rcppeigen{a} r-cran-rematch2{a} r-cran-rlang{a} r-cran-rprojroot{a} r-cran-statmod{a} r-cran-testthat{a} r-cran-tibble{a} r-cran-tmb{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-waldo{a} r-cran-withr{a} readline-common{a} sensible-utils{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx publicsuffix r-cran-bit64 r-cran-bitops r-cran-cliapp r-cran-codetools r-cran-covr r-cran-curl r-cran-data.table r-cran-dbi r-cran-dplyr r-cran-formattable r-cran-generics r-cran-gh r-cran-httr r-cran-knitr r-cran-lubridate r-cran-mockery r-cran-mockr r-cran-pkgbuild r-cran-rmarkdown r-cran-rsqlite r-cran-sp r-cran-xml2 r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 226 newly installed, 0 to remove and 0 not upgraded. Need to get 130 MB of archives. After unpacking 373 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.8-1 [1407 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 26 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 28 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 zip amd64 3.0-13 [230 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 unzip amd64 6.0-28 [166 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libpaper1 amd64 1.1.29 [12.5 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libpaper-utils amd64 1.1.29 [8868 B] Get: 40 http://deb.debian.org/debian bookworm/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-4 [399 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-8 [386 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-4 [449 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2+b1 [43.3 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.12+ds-1 [212 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.12+ds-1 [47.4 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.12+ds-1 [34.2 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get: 87 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.1 [285 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-5 [316 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 96 http://deb.debian.org/debian bookworm/main amd64 libxt6 amd64 1:1.2.1-1.1 [186 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 r-base-core amd64 4.2.2.20221110-2 [26.0 MB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 libgfortran-12-dev amd64 12.2.0-14 [834 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 gfortran-12 amd64 12.2.0-14 [10.2 MB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 gfortran amd64 4:12.2.0-3 [1428 B] Get: 101 http://deb.debian.org/debian bookworm/main amd64 libblas-dev amd64 3.11.0-2 [158 kB] Get: 102 http://deb.debian.org/debian bookworm/main amd64 liblapack-dev amd64 3.11.0-2 [4631 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libncurses6 amd64 6.4-2 [103 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 libncurses-dev amd64 6.4-2 [348 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libncurses5-dev amd64 6.4-2 [932 B] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libreadline-dev amd64 8.2-1.3 [151 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2 [290 kB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 libjpeg-dev amd64 1:2.1.5-2 [71.8 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 libpcre2-16-0 amd64 10.42-1 [245 kB] Get: 110 http://deb.debian.org/debian bookworm/main amd64 libpcre2-32-0 amd64 10.42-1 [234 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 libpcre2-posix3 amd64 10.42-1 [55.4 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 libpcre2-dev amd64 10.42-1 [753 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 libpcre3 amd64 2:8.39-15 [341 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 libpcre16-3 amd64 2:8.39-15 [257 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 libpcre32-3 amd64 2:8.39-15 [248 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libpcrecpp0v5 amd64 2:8.39-15 [143 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libpcre3-dev amd64 2:8.39-15 [653 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libpng-dev amd64 1.6.39-2 [359 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libbz2-dev amd64 1.0.8-5+b1 [30.9 kB] Get: 121 http://deb.debian.org/debian bookworm/main amd64 liblzma-dev amd64 5.4.1-0.2 [260 kB] Get: 122 http://deb.debian.org/debian bookworm/main amd64 icu-devtools amd64 72.1-3 [206 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 libicu-dev amd64 72.1-3 [10.3 MB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libxmuu1 amd64 2:1.1.3-3 [23.9 kB] Get: 125 http://deb.debian.org/debian bookworm/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get: 127 http://deb.debian.org/debian bookworm/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 pkgconf amd64 1.8.1-1 [25.9 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 pkg-config amd64 1.8.1-1 [13.7 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 r-base-dev all 4.2.2.20221110-2 [4492 B] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libswitch-perl all 2.17-3 [20.3 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 136 http://deb.debian.org/debian bookworm/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 139 http://deb.debian.org/debian bookworm/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get: 140 http://deb.debian.org/debian bookworm/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get: 142 http://deb.debian.org/debian bookworm/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get: 143 http://deb.debian.org/debian bookworm/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 151 http://deb.debian.org/debian bookworm/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get: 152 http://deb.debian.org/debian bookworm/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 libclass-load-xs-perl amd64 0.10-2+b1 [14.0 kB] Get: 155 http://deb.debian.org/debian bookworm/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get: 156 http://deb.debian.org/debian bookworm/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Get: 157 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Get: 160 http://deb.debian.org/debian bookworm/main amd64 libdevel-overloadinfo-perl all 0.007-1 [7896 B] Get: 161 http://deb.debian.org/debian bookworm/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get: 163 http://deb.debian.org/debian bookworm/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] Get: 164 http://deb.debian.org/debian bookworm/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Get: 166 http://deb.debian.org/debian bookworm/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Get: 167 http://deb.debian.org/debian bookworm/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b1 [19.8 kB] Get: 168 http://deb.debian.org/debian bookworm/main amd64 libmoose-perl amd64 2.2203-1 [794 kB] Get: 169 http://deb.debian.org/debian bookworm/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get: 170 http://deb.debian.org/debian bookworm/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get: 171 http://deb.debian.org/debian bookworm/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get: 172 http://deb.debian.org/debian bookworm/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get: 173 http://deb.debian.org/debian bookworm/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get: 174 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.88.1-8 [380 kB] Get: 175 http://deb.debian.org/debian bookworm/main amd64 libwww-curl-perl amd64 4.17-10 [58.3 kB] Get: 176 http://deb.debian.org/debian bookworm/main amd64 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] Get: 177 http://deb.debian.org/debian bookworm/main amd64 dh-r all 20230121 [37.9 kB] Get: 178 http://deb.debian.org/debian bookworm/main amd64 libnlopt0 amd64 2.7.1-4+b4 [174 kB] Get: 179 http://deb.debian.org/debian bookworm/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get: 180 http://deb.debian.org/debian bookworm/main amd64 r-cran-littler amd64 0.3.17-1 [96.3 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 littler all 0.3.17-1 [14.4 kB] Get: 182 http://deb.debian.org/debian bookworm/main amd64 r-cran-boot all 1.3-28.1-1 [620 kB] Get: 183 http://deb.debian.org/debian bookworm/main amd64 r-cran-brio amd64 1.1.3-1+b1 [35.5 kB] Get: 184 http://deb.debian.org/debian bookworm/main amd64 r-cran-ps amd64 1.7.2-1 [308 kB] Get: 185 http://deb.debian.org/debian bookworm/main amd64 r-cran-r6 all 2.5.1-1 [105 kB] Get: 186 http://deb.debian.org/debian bookworm/main amd64 r-cran-processx amd64 3.8.0-1 [339 kB] Get: 187 http://deb.debian.org/debian bookworm/main amd64 r-cran-callr all 3.7.3-2 [426 kB] Get: 188 http://deb.debian.org/debian bookworm/main amd64 r-cran-cli amd64 3.6.0-1 [1287 kB] Get: 189 http://deb.debian.org/debian bookworm/main amd64 r-cran-crayon all 1.5.2-1 [165 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 r-cran-rprojroot all 2.0.3-1 [119 kB] Get: 191 http://deb.debian.org/debian bookworm/main amd64 r-cran-desc all 1.4.2-1 [348 kB] Get: 192 http://deb.debian.org/debian bookworm/main amd64 r-cran-diffobj amd64 0.3.5-1+b1 [1122 kB] Get: 193 http://deb.debian.org/debian bookworm/main amd64 r-cran-digest amd64 0.6.31-1 [184 kB] Get: 194 http://deb.debian.org/debian bookworm/main amd64 r-cran-rlang amd64 1.0.6-1 [1618 kB] Get: 195 http://deb.debian.org/debian bookworm/main amd64 r-cran-ellipsis amd64 0.3.2-2 [35.1 kB] Get: 196 http://deb.debian.org/debian bookworm/main amd64 r-cran-evaluate all 0.20-1 [85.9 kB] Get: 197 http://deb.debian.org/debian bookworm/main amd64 r-cran-fansi amd64 1.0.4-1 [619 kB] Get: 198 http://deb.debian.org/debian bookworm/main amd64 r-cran-fs amd64 1.6.1+dfsg-1 [226 kB] Get: 199 http://deb.debian.org/debian bookworm/main amd64 r-cran-glue amd64 1.6.2-1 [152 kB] Get: 200 http://deb.debian.org/debian bookworm/main amd64 r-cran-jsonlite amd64 1.8.4+dfsg-1 [442 kB] Get: 201 http://deb.debian.org/debian bookworm/main amd64 r-cran-lattice amd64 0.20-45-3 [1177 kB] Get: 202 http://deb.debian.org/debian bookworm/main amd64 r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB] Get: 203 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrix amd64 1.5-3-1 [3822 kB] Get: 204 http://deb.debian.org/debian bookworm/main amd64 r-cran-mass amd64 7.3-58.2-1 [1121 kB] Get: 205 http://deb.debian.org/debian bookworm/main amd64 r-cran-nlme amd64 3.1.162-1 [2260 kB] Get: 206 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgkitten all 0.2.2-2 [27.0 kB] Get: 207 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpp amd64 1.0.10-1 [2059 kB] Get: 208 http://deb.debian.org/debian bookworm/main amd64 r-cran-minqa amd64 1.2.5-1 [113 kB] Get: 209 http://deb.debian.org/debian bookworm/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] Get: 210 http://deb.debian.org/debian bookworm/main amd64 r-cran-withr all 2.5.0-1 [236 kB] Get: 211 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgload all 1.3.2-1 [206 kB] Get: 212 http://deb.debian.org/debian bookworm/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get: 213 http://deb.debian.org/debian bookworm/main amd64 r-cran-utf8 amd64 1.2.3-1 [133 kB] Get: 214 http://deb.debian.org/debian bookworm/main amd64 r-cran-vctrs amd64 0.5.2-1 [1371 kB] Get: 215 http://deb.debian.org/debian bookworm/main amd64 r-cran-pillar all 1.8.1+dfsg-1 [463 kB] Get: 216 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get: 217 http://deb.debian.org/debian bookworm/main amd64 r-cran-tibble amd64 3.1.8+dfsg-1 [513 kB] Get: 218 http://deb.debian.org/debian bookworm/main amd64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get: 219 http://deb.debian.org/debian bookworm/main amd64 r-cran-waldo all 0.4.0-1 [116 kB] Get: 220 http://deb.debian.org/debian bookworm/main amd64 r-cran-testthat amd64 3.1.6-1 [1545 kB] Get: 221 http://deb.debian.org/debian bookworm/main amd64 r-cran-nloptr amd64 2.0.3-1 [375 kB] Get: 222 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppeigen amd64 0.3.3.9.3-1 [1191 kB] Get: 223 http://deb.debian.org/debian bookworm/main amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] Get: 224 http://deb.debian.org/debian bookworm/main amd64 r-cran-lme4 amd64 1.1-31-1 [4087 kB] Get: 225 http://deb.debian.org/debian bookworm/main amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] Get: 226 http://deb.debian.org/debian bookworm/main amd64 r-cran-tmb amd64 1.9.2-1 [1029 kB] Fetched 130 MB in 2s (73.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../000-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.8-1_amd64.deb ... Unpacking openssl (3.0.8-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../008-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.22.4-10_amd64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.38.1-5+b1_amd64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../011-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.11.2-2_amd64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package ucf. Preparing to unpack .../013-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../014-m4_1.4.19-3_amd64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../015-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../016-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../017-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../018-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../019-dctrl-tools_2.24-3+b1_amd64.deb ... Unpacking dctrl-tools (2.24-3+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../020-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../021-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../022-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../023-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../024-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../025-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../026-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../027-libelf1_0.188-2.1_amd64.deb ... Unpacking libelf1:amd64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../028-dwz_0.15-1_amd64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../029-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../030-libxml2_2.9.14+dfsg-1.1+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.1+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../031-gettext_0.21-12_amd64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../032-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../033-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../034-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package zip. Preparing to unpack .../035-zip_3.0-13_amd64.deb ... Unpacking zip (3.0-13) ... Selecting previously unselected package unzip. Preparing to unpack .../036-unzip_6.0-28_amd64.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../037-libpaper1_1.1.29_amd64.deb ... Unpacking libpaper1:amd64 (1.1.29) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../038-libpaper-utils_1.1.29_amd64.deb ... Unpacking libpaper-utils (1.1.29) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../039-xdg-utils_1.1.3-4.1_all.deb ... Unpacking xdg-utils (1.1.3-4.1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../040-libblas3_3.11.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.11.0-2) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../041-libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../042-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../043-libpng16-16_1.6.39-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.39-2) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../044-libfreetype6_2.12.1+dfsg-4_amd64.deb ... Unpacking libfreetype6:amd64 (2.12.1+dfsg-4) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../045-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../046-fontconfig-config_2.14.1-4_amd64.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../047-libfontconfig1_2.14.1-4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.14.1-4) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../048-libpixman-1-0_0.42.2-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.42.2-1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../049-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../050-libbsd0_0.11.7-2_amd64.deb ... Unpacking libbsd0:amd64 (0.11.7-2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../051-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../052-libxcb1_1.15-1_amd64.deb ... Unpacking libxcb1:amd64 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../053-libx11-data_2%3a1.8.4-2_all.deb ... Unpacking libx11-data (2:1.8.4-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../054-libx11-6_2%3a1.8.4-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.4-2) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../055-libxcb-render0_1.15-1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.15-1) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../056-libxcb-shm0_1.15-1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.15-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../057-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../058-libxrender1_1%3a0.9.10-1.1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../059-libcairo2_1.16.0-7_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-7) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../060-libsasl2-modules-db_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../061-libsasl2-2_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../062-libldap-2.5-0_2.5.13+dfsg-5_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../063-libnghttp2-14_1.52.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.52.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../064-libpsl5_0.21.2-1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.2-1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../065-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../066-libssh2-1_1.10.0-3+b1_amd64.deb ... Unpacking libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../067-libcurl4_7.88.1-8_amd64.deb ... Unpacking libcurl4:amd64 (7.88.1-8) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../068-libglib2.0-0_2.74.6-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.74.6-2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../069-libjpeg62-turbo_1%3a2.1.5-2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-2) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../070-libgfortran5_12.2.0-14_amd64.deb ... Unpacking libgfortran5:amd64 (12.2.0-14) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../071-liblapack3_3.11.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.11.0-2) ... Selecting previously unselected package fontconfig. Preparing to unpack .../072-fontconfig_2.14.1-4_amd64.deb ... Unpacking fontconfig (2.14.1-4) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../073-libfribidi0_1.0.8-2.1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.8-2.1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../074-libgraphite2-3_1.3.14-1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../075-libharfbuzz0b_6.0.0+dfsg-3_amd64.deb ... Unpacking libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Selecting previously unselected package libthai-data. Preparing to unpack .../076-libthai-data_0.1.29-1_all.deb ... Unpacking libthai-data (0.1.29-1) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../077-libdatrie1_0.2.13-2+b1_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.13-2+b1) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../078-libthai0_0.1.29-1_amd64.deb ... Unpacking libthai0:amd64 (0.1.29-1) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../079-libpango-1.0-0_1.50.12+ds-1_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.50.12+ds-1) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../080-libpangoft2-1.0-0_1.50.12+ds-1_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../081-libpangocairo-1.0-0_1.50.12+ds-1_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../082-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../083-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../084-libdeflate0_1.14-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.14-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../085-libjbig0_2.1-6.1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1) ... Selecting previously unselected package liblerc4:amd64. 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Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.16.0-7) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libxt6:amd64 (1:1.2.1-1.1) ... Setting up xauth (1:1.1.2-1) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up libwww-curl-perl:amd64 (4.17-10) ... Setting up debhelper (13.11.4) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... 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Building dependency tree... Reading state information... usrmerge is already the newest version (35). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/768810/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... removed '/etc/unsupported-skip-usrmerge-conversion' The system has been successfully converted. I: user script /srv/workspace/pbuilder/768810/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/r-cran-glmmtmb-1.1.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../r-cran-glmmtmb_1.1.5+dfsg-4_source.changes dpkg-buildpackage: info: source package r-cran-glmmtmb dpkg-buildpackage: info: source version 1.1.5+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R dh_auto_test -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R dh_auto_install --destdir=debian/r-cran-glmmtmb/ -O--buildsystem=R I: R packages needed for DEP8: glmmtmb I: R Package: glmmTMB Version: 1.1.5 I: Building using R version 4.2.2.20221110-2 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Wed, 08 Feb 2023 11:32:12 +0100 mkdir -p /build/r-cran-glmmtmb-1.1.5\+dfsg/debian/r-cran-glmmtmb/usr/lib/R/site-library R CMD INSTALL -l /build/r-cran-glmmtmb-1.1.5\+dfsg/debian/r-cran-glmmtmb/usr/lib/R/site-library --clean . "--built-timestamp='Wed, 08 Feb 2023 11:32:12 +0100'" * installing *source* package 'glmmTMB' ... files 'inst/doc/covstruct.html', 'inst/doc/hacking.html', 'inst/doc/mcmc.html', 'inst/doc/miscEx.html', 'inst/doc/parallel.html', 'inst/doc/sim.html', 'inst/doc/troubleshooting.html' are missing file 'DESCRIPTION' has the wrong MD5 checksum ** using staged installation ** libs make[1]: Entering directory '/build/r-cran-glmmtmb-1.1.5+dfsg/src' g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -DTMBAD_FRAMEWORK -I'/usr/lib/R/site-library/TMB/include' -I'/usr/lib/R/site-library/RcppEigen/include' -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/r-base-wZDgjM/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c glmmTMB.cpp -o glmmTMB.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:78, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:23:29: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from 'struct Eigen::internal::traits > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from 'class Eigen::Map >' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:92:71: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from 'struct Eigen::internal::traits > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from 'class Eigen::Map >' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:92:71: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:92:71: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:92:71: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:94:69: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase > >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase > >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:104:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Transpose > >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Transpose > >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Transpose > >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Transpose > >, 0>' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:104:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose > >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Transpose > >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Transpose > >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Transpose > >, 0>' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:105:59: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Map >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Map >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Map >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Map >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Map >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Map >, 0>' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:106:59: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Map >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Map >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Map >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Map >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Map >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Map >, 0>' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:108:48: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:65: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from 'struct tmbutils::vector' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:45:43: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from 'struct tmbutils::vector' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:45:43: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:248:22: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 2>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 2>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Reverse.h:63:52: required from 'class Eigen::Reverse, 2>' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:257:27: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:520: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Reverse.h: In instantiation of 'class Eigen::Reverse, 2>': /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:257:27: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Reverse.h:85:71: warning: ignoring attributes on template argument 'Eigen::ArrayBase, 2> >::PacketScalar' {aka '__m128i'} [-Wignored-attributes] 85 | typedef internal::reverse_packet_cond reverse_packet; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from 'struct tmbutils::vector' /usr/lib/R/site-library/TMB/include/tmbutils/vectorize.hpp:54:35: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from 'struct Eigen::internal::traits > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from 'class Eigen::Map >' /usr/lib/R/site-library/TMB/include/convert.hpp:114:24: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' /usr/lib/R/site-library/TMB/include/convert.hpp:114:24: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PermutationMatrix.h:65:13: required from 'class Eigen::PermutationBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PermutationMatrix.h:297:7: required from 'class Eigen::PermutationMatrix<-1, -1, int>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:284:21: required from 'class Eigen::PartialPivLU >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:528:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, -1, false>' /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, -1, -1, false> >' /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >' /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:22:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:22:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/TMB/include/TMB.hpp:82: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:7:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 1> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from 'class Eigen::TriangularViewImpl, 1, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:186:58: required from 'class Eigen::TriangularView, 1>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:42:26: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:42:56: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:42:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper, 0> >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:42:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:563:19: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:563:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:566:17: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:77:37: required from 'struct Eigen::SimplicialInverseSubset' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1054:35: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1082:26: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:101:8: required from 'struct tmbutils::matrix' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:528:51: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from 'struct Eigen::internal::cast_return_type, const Eigen::CwiseUnaryOp, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::ArrayBase >::CastXpr' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::ArrayBase >::CastXpr::Type Eigen::ArrayBase >::cast() const [with NewType = int]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:2280:32: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/tmbutils/sparse_matrix_exponential.hpp:225:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/tmbutils/sparse_matrix_exponential.hpp:225:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' distrib.h:40:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' distrib.h:40:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' /usr/lib/R/site-library/TMB/include/expm.hpp:129:36: required from 'atomic::nestedTriangle::nestedTriangle(tmbutils::vector >) [with int n = 1]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' /usr/lib/R/site-library/TMB/include/expm.hpp:129:36: required from 'atomic::nestedTriangle::nestedTriangle(tmbutils::vector >) [with int n = 1]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >' glmmTMB.cpp:559:28: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >' glmmTMB.cpp:834:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >' glmmTMB.cpp:847:17: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/start_parallel.hpp:375:43: required from 'Vector parallelADFun::forward(const Vector&) [with Vector = Eigen::Matrix; Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:2616:24: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper >' /usr/lib/R/site-library/TMB/include/convenience.hpp:49:23: required from 'tmbutils::vector operator*(Eigen::SparseMatrix, tmbutils::vector) [with Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/sparse_matrix_exponential.hpp:225:18: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::MatrixWrapper >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::MatrixWrapper >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::MatrixWrapper >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::MatrixWrapper >, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::MatrixWrapper >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::MatrixWrapper >, 0>' /usr/lib/R/site-library/TMB/include/convenience.hpp:49:13: required from 'tmbutils::vector operator*(Eigen::SparseMatrix, tmbutils::vector) [with Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/sparse_matrix_exponential.hpp:225:18: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::MatrixWrapper >, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::MatrixWrapper >, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::MatrixWrapper >, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, Eigen::MatrixWrapper >, 0> >' /usr/lib/R/site-library/TMB/include/convenience.hpp:49:32: required from 'tmbutils::vector operator*(Eigen::SparseMatrix, tmbutils::vector) [with Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/sparse_matrix_exponential.hpp:225:18: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' /usr/lib/R/site-library/TMB/include/expm.hpp:30:21: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' /usr/lib/R/site-library/TMB/include/expm.hpp:30:27: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::internal::member_sum, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::internal::member_sum, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::internal::member_sum, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>' /usr/lib/R/site-library/TMB/include/expm.hpp:31:47: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/expm.hpp:18:23: required from 'atomic::Block atomic::Block::scale(Type) [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:165:29: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/expm.hpp:25:29: required from 'atomic::Block atomic::Block::addIdentity() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:168:45: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:69:7: required from 'class Eigen::InverseImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from 'class Eigen::Inverse >' /usr/lib/R/site-library/TMB/include/expm.hpp:36:36: required from 'atomic::Block atomic::Block::inverse() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator, -1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1563:41: required from 'struct Eigen::internal::evaluator, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::ArrayWrapper, 0> > >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:42:76: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Map > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Map >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Map > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from 'struct Eigen::internal::cast_return_type >, const Eigen::CwiseUnaryOp, const Eigen::Map > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::MatrixBase > >::CastXpr' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::MatrixBase > >::CastXpr::Type Eigen::MatrixBase > >::cast() const [with NewType = int]' /usr/lib/R/site-library/TMB/include/convert.hpp:114:35: required from 'tmbutils::vector asVector(SEXP) [with Type = int; SEXP = SEXPREC*]' glmmTMB.cpp:547:3: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Array >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:34:67: required from 'Derived& Eigen::ArrayBase::operator-=(const Scalar&) [with Derived = Eigen::Array; Scalar = int]' glmmTMB.cpp:861:16: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Map > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Map >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Map > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from 'struct Eigen::internal::cast_return_type >, const Eigen::CwiseUnaryOp, const Eigen::Map > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::MatrixBase > >::CastXpr' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::MatrixBase > >::CastXpr::Type Eigen::MatrixBase > >::cast() const [with NewType = double]' /usr/lib/R/site-library/TMB/include/convert.hpp:114:35: required from 'tmbutils::vector asVector(SEXP) [with Type = double; SEXP = SEXPREC*]' glmmTMB.cpp:513:3: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1>' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:444:48: required from 'void data_indicator::fill(tmbutils::vector, SEXP) [with VT = tmbutils::vector; Type = double; SEXP = SEXPREC*]' glmmTMB.cpp:549:3: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:22:8: required from 'struct tmbutils::array' glmmTMB.cpp:492:17: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::MatrixWrapper >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::MatrixWrapper >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::MatrixWrapper >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::MatrixWrapper >, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::MatrixWrapper >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::MatrixWrapper >, 0>' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:577:56: required from 'void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector; Type = double]' glmmTMB.cpp:869:4: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >' glmmTMB.cpp:269:23: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >' glmmTMB.cpp:304:36: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >' glmmTMB.cpp:304:25: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >' glmmTMB.cpp:304:19: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >' glmmTMB.cpp:427:23: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, 0, Eigen::Stride<0, 0> >, -1>' glmmTMB.cpp:461:43: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' glmmTMB.cpp:467:44: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>' glmmTMB.cpp:467:26: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 0> > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper, 0> >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper, 0> > >' glmmTMB.cpp:468:50: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase > >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase > >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >' glmmTMB.cpp:469:74: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose > >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Transpose > >, 0, 5>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Transpose > >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Transpose > >, 0>' glmmTMB.cpp:469:46: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose > >, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose > >, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >, Eigen::Transpose > >, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >, Eigen::Transpose > >, 0> >' glmmTMB.cpp:469:83: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Array >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Array; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Array]' glmmTMB.cpp:589:23: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/start_parallel.hpp:374:16: required from 'Vector parallelADFun::forward(const Vector&) [with Vector = Eigen::Matrix; Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:2616:24: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:747:33: required from 'static Derived& Eigen::internal::setIdentity_impl::run(Derived&) [with Derived = Eigen::Matrix; bool Big = false]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:776:50: required from 'Derived& Eigen::MatrixBase::setIdentity() [with Derived = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/expm.hpp:24:20: required from 'atomic::Block atomic::Block::addIdentity() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:168:45: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1>' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:206:25: required from 'tmbutils::array tmbutils::array::col(int) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:251:38: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:926:66: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:24:22: required from 'Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = double; SEXP = SEXPREC*]' glmmTMB.cpp:507:3: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/tmbutils/tmbutils_extra.hpp:10:7: required from 'tmbutils::vector tmbutils::dnorm(vector, T1, T2, int) [with Type = double; T1 = double; T2 = int]' glmmTMB.cpp:437:19: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/tmbutils/tmbutils_extra.hpp:10:13: required from 'tmbutils::vector tmbutils::dnorm(vector, T1, T2, int) [with Type = double; T1 = double; T2 = int]' glmmTMB.cpp:437:19: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/tmbutils/tmbutils_extra.hpp:11:48: required from 'tmbutils::vector tmbutils::dnorm(vector, T1, T2, int) [with Type = double; T1 = double; T2 = int]' glmmTMB.cpp:437:19: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/tmbutils/tmbutils_extra.hpp:11:37: required from 'tmbutils::vector tmbutils::dnorm(vector, T1, T2, int) [with Type = double; T1 = double; T2 = int]' glmmTMB.cpp:437:19: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1176:24: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:255:7: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:21:17: required from 'Eigen::SparseMatrix pattern(const Eigen::SparseMatrix&, std::vector) [with NewType = double; OldType = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1178:64: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:21:17: required from 'Eigen::SparseMatrix pattern(const Eigen::SparseMatrix&, std::vector) [with NewType = double; OldType = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1178:64: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:21:17: required from 'Eigen::SparseMatrix pattern(const Eigen::SparseMatrix&, std::vector) [with NewType = double; OldType = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1178:64: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:12: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = TMBad::global::ad_aug; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = TMBad::global::ad_aug; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:24:22: required from 'Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = TMBad::global::ad_aug; SEXP = SEXPREC*]' glmmTMB.cpp:507:3: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Array; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_product_op; Derived = Eigen::internal::redux_evaluator >; Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_product_op; Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:487:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::prod() const [with Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:598:39: required from 'SEXPREC* report_stack::reportnames() [with Type = TMBad::global::ad_aug; SEXP = SEXPREC*]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1258:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:24:22: required from 'Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = double; SEXP = SEXPREC*]' glmmTMB.cpp:507:3: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1>, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1>, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1>, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, 1>, Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, 1>, Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:21: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from 'class Eigen::Diagonal, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:147:34: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:302:3: required from 'tmbutils::array tmbutils::array::operator/(T) [with T = tmbutils::vector; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:1030:23: required from 'density::VECSCALE_t::scalartype density::VECSCALE_t::operator()(arraytype) [with distribution = density::UNSTRUCTURED_CORR_t; scalartype = double; arraytype = tmbutils::array]' glmmTMB.cpp:267:22: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:302:3: required from 'tmbutils::array tmbutils::array::operator/(T) [with T = double; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:970:23: required from 'density::SCALE_t::scalartype density::SCALE_t::operator()(arraytype) [with distribution = density::MVNORM_t; scalartype = double; arraytype = tmbutils::array]' glmmTMB.cpp:425:22: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Array; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:32:29: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:292:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:683:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:21:17: required from 'Eigen::SparseMatrix pattern(const Eigen::SparseMatrix&, std::vector) [with NewType = double; OldType = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1178:64: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:932:15: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = TMBad::global::ad_aug; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:24:22: required from 'Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = TMBad::global::ad_aug; SEXP = SEXPREC*]' glmmTMB.cpp:507:3: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:30:18: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:663:15: required from 'void Eigen::SimplicialCholeskyBase::ordering(const MatrixType&, const CholMatrixType*&, CholMatrixType&) [with Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix; ConstCholMatrixPtr = const Eigen::SparseMatrix*; CholMatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:200:7: required from 'void Eigen::SimplicialCholeskyBase::compute(const MatrixType&) [with bool DoLDLT = false; Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:366:36: required from 'Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>& Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>::compute(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:89:24: required from 'Eigen::SimplicialCholeskyBase::SimplicialCholeskyBase(const MatrixType&) [with Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:349:22: required from 'Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>::SimplicialLLT(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1195:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, const Eigen::SparseMatrix, const Eigen::SparseMatrix > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:36:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::SparseMatrix, const Eigen::SparseMatrix, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::SparseMatrix, const Eigen::SparseMatrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:36:14: required from 'void Eigen::internal::ordering_helper_at_plus_a(const MatrixType&, MatrixType&) [with MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:65:42: required from 'void Eigen::AMDOrdering::operator()(const MatrixType&, PermutationType&) [with MatrixType = Eigen::SparseMatrix; StorageIndex = int; PermutationType = Eigen::PermutationMatrix<-1, -1, int>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:663:15: required from 'void Eigen::SimplicialCholeskyBase::ordering(const MatrixType&, const CholMatrixType*&, CholMatrixType&) [with Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix; ConstCholMatrixPtr = const Eigen::SparseMatrix*; CholMatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:200:7: required from 'void Eigen::SimplicialCholeskyBase::compute(const MatrixType&) [with bool DoLDLT = false; Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:366:36: required from 'Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>& Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>::compute(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:89:24: required from 'Eigen::SimplicialCholeskyBase::SimplicialCholeskyBase(const MatrixType&) [with Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:349:22: required from 'Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>::SimplicialLLT(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1195:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:496: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'class Eigen::internal::gebp_traits': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:110:68: required from 'void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 391 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 392 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 393 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0>, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 0>, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 0>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 0>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0>, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:319:43: required from 'static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:80: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:67: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from 'class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:353:35: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:32: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:373:56: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:381:32: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:69:7: required from 'class Eigen::InverseImpl >, Eigen::SolverStorage>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from 'class Eigen::Inverse > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/InverseImpl.h:28:43: required from 'static void Eigen::internal::compute_inverse::run(const MatrixType&, ResultType&) [with MatrixType = Eigen::Matrix; ResultType = Eigen::Matrix; int Size = -1]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/InverseImpl.h:310:60: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from 'atomic::Block atomic::Block::inverse() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1176:24: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Array, const Eigen::Array > >; Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:248:26: required from 'int tmbutils::array::index(tmbutils::vector) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:221:38: required from 'Type& tmbutils::array::operator()(int, int) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:331:21: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, -1, 1, false>; Functor = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, -1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, -1, 1, false>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::VectorBlock, -1>; OtherDerived = Eigen::Block, -1, 1, false>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::VectorBlock, -1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::VectorBlock, -1>; Type = double]' glmmTMB.cpp:493:18: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:464:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:16: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0>, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 0>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, 0>, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 0>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from 'class Eigen::internal::visitor_evaluator, const Eigen::Block, 0>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from 'void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0>, -1, 1, false> > >; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:266:14: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:131:44: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Array, const Eigen::Array > >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:153:37: required from 'density::MVNORM_t::scalartype density::MVNORM_t::Quadform(vectortype) [with scalartype_ = double; scalartype = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:157:53: required from 'density::MVNORM_t::scalartype density::MVNORM_t::operator()(vectortype) [with scalartype_ = double; scalartype = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:1030:21: required from 'density::VECSCALE_t::scalartype density::VECSCALE_t::operator()(arraytype) [with distribution = density::UNSTRUCTURED_CORR_t; scalartype = double; arraytype = tmbutils::array]' glmmTMB.cpp:267:22: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:357:27: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>; Functor = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::VectorBlock, 0, Eigen::Stride<0, 0> >, -1>; OtherDerived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, false>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::VectorBlock, 0, Eigen::Stride<0, 0> >, -1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::VectorBlock, 0, Eigen::Stride<0, 0> >, -1>; Type = double]' glmmTMB.cpp:461:20: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:104:15: required from 'static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from 'void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from 'void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:133:13: required from 'static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from 'void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from 'void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:103: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1537 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1592 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1593 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1594 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1595 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:523:30: required from 'void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:131:14: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, const Eigen::Matrix >, Eigen::internal::member_sum, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:523:46: required from 'void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:131:14: required from 'Eigen::PartialPivLU& Eigen::PartialPivLU::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:323:10: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from 'struct Eigen::internal::plain_object_eval, -1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from 'struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from 'ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from 'struct Eigen::internal::plain_object_eval, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from 'struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from 'ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, -1, -1, false>, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:58: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, -1, 1, false>; Functor = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, -1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:33:26: required from 'tmbutils::vector& tmbutils::vector::operator=(const T1&) [with T1 = Eigen::VectorBlock, -1>; Type = int]' /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:206:13: required from 'tmbutils::array tmbutils::array::col(int) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:251:38: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = TMBad::global::ad_aug]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1255:6: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:16: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:36: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, -1, false>, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, -1, false>, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:36: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:499: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::MatrixWrapper >, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:75:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 75 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:76:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 76 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:77:71: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 77 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:287:40: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:464:13: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from 'void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename SrcXprType::Scalar = int; typename DstXprType::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2193:41: required from 'std::vector TMBad::global::Complete::operator()(const std::vector&) [with T = TMBad::global::ad_aug; OperatorBase = newton::LogDetOperator<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1179:27: required from 'Type newton::log_determinant(const Eigen::SparseMatrix&, std::shared_ptr >) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1376:25: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:492:30: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from 'static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:74: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:145:63: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:565:26: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:9: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Matrix, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Matrix, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Matrix, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:595:38: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:9: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; ResScalar = double]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::MatrixWrapper >, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 112 | conj_helper pcj; | ^~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Matrix; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, Eigen::Matrix, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:18:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:381:43: required from 'static Eigen::Index Eigen::internal::partial_lu_impl::unblocked_lu(MatrixType&, PivIndex*, PivIndex&) [with Scalar = double; int StorageOrder = 0; PivIndex = int; Eigen::Index = long int; MatrixType = Eigen::Block >, -1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:436:26: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, 1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0, 5>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:406:78: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:9: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from 'Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, -1, false>; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:586:18: required from 'void Eigen::LDLT::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:9: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from 'struct Eigen::internal::plain_object_eval, -1, -1, false>, -1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from 'struct Eigen::internal::generic_product_impl, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, Eigen::DenseShape, Eigen::DenseShape, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Transpose, -1, -1, false>, 1, -1, false> >; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>; Func = sub_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from 'ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>; ExpressionType = Eigen::Block, -1, -1, false>, -1, 1, false>; StorageBase = Eigen::MatrixBase]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:38: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:155:52: required from 'void Eigen::internal::tribb_kernel::operator()(ResScalar*, Index, Index, const LhsScalar*, const RhsScalar*, Index, Index, const ResScalar&) [with LhsScalar = double; RhsScalar = double; Index = long int; int mr = 4; int nr = 4; bool ConjLhs = false; bool ConjRhs = false; int ResInnerStride = 1; int UpLo = 1; ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:116:13: required from 'static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 1; int Version = 0; ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:371: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In instantiation of 'Index Eigen::internal::first_default_aligned(const Scalar*, Index) [with Scalar = double; Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:128:55: required from 'static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from 'tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]' glmmTMB.cpp:561:13: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:470:60: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 470 | return first_aligned::alignment>(array, size); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Transpose > >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Transpose > >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Transpose > >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Transpose > >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Transpose > >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Transpose > >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose > >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose > >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Transpose > >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Transpose > >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Transpose > >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Transpose > >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, Eigen::Map >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, Eigen::Map >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, Eigen::Map >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base > >, Eigen::Map >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl > >, Eigen::Map >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product > >, Eigen::Map >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Map >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Map >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Map >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Map >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Map >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Map >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 1; Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, 1, -1, false>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 1; Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::CwiseNullaryOp, Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::CwiseNullaryOp, Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, Eigen::CwiseNullaryOp, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:577:39: required from 'static void Eigen::internal::Assignment >, Eigen::internal::assign_op::Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op::Scalar>&) [with DstXprType = Eigen::Matrix; MatrixType = Eigen::Matrix; SrcXprType = Eigen::Inverse > >; typename Eigen::PartialPivLU::Scalar = double; typename DstXprType::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from 'atomic::Block atomic::Block::inverse() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Matrix; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator >; Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:467:24: required from 'void Eigen::internal::permute_symm_to_fullsymm(const MatrixType&, Eigen::SparseMatrix&, const typename MatrixType::StorageIndex*) [with int Mode = 1; MatrixType = Eigen::SparseMatrix; int DestOrder = 0; typename MatrixType::StorageIndex = int; typename MatrixType::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:231:57: required from 'static void Eigen::internal::Assignment::run(Eigen::SparseMatrix&, const SrcXprType&, const AssignOpType&) [with DestScalar = double; int StorageOrder = 0; DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseSelfAdjointView, 1>; Functor = Eigen::internal::assign_op; typename DstXprType::StorageIndex = int; AssignOpType = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:660:9: required from 'void Eigen::SimplicialCholeskyBase::ordering(const MatrixType&, const CholMatrixType*&, CholMatrixType&) [with Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix; ConstCholMatrixPtr = const Eigen::SparseMatrix*; CholMatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:200:7: required from 'void Eigen::SimplicialCholeskyBase::compute(const MatrixType&) [with bool DoLDLT = false; Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:366:36: required from 'Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>& Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>::compute(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:89:24: required from 'Eigen::SimplicialCholeskyBase::SimplicialCholeskyBase(const MatrixType&) [with Derived = Eigen::SimplicialLLT >; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:349:22: required from 'Eigen::SimplicialLLT<_MatrixType, _UpLo, _Ordering>::SimplicialLLT(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1195:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48: required from 'void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Matrix; Lhs = Eigen::MatrixWrapper >; Rhs = Eigen::Transpose > >; Func = generic_product_impl >, Eigen::Transpose > >, Eigen::DenseShape, Eigen::DenseShape, 5>::set]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:317:41: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::ArrayWrapper >; Src = Eigen::ArrayWrapper >, Eigen::Transpose > >, 0> >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:220:18: required from 'Derived& Eigen::ArrayBase::operator/=(const Eigen::ArrayBase&) [with OtherDerived = Eigen::ArrayWrapper >, Eigen::Transpose > >, 0> >; Derived = Eigen::ArrayWrapper >]' glmmTMB.cpp:469:25: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, -1, 1, true, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::Matrix >, -1, 1, true, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::Matrix >, -1, 1, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:33: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, 1, -1, false, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::Matrix >, 1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::Matrix >, 1, -1, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1309:33: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from 'CppAD::vector atomic::logdet(const CppAD::vector&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from 'class Eigen::internal::visitor_evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true>, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from 'class Eigen::internal::visitor_evaluator, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from 'void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >; Derived = Eigen::CwiseUnaryOp, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:266:14: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = div_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from 'Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, -1, -1, false>, -1, 1, false>; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:326:21: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:171:23: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'void density::MVNORM_t::simulate(vectortype&) [with scalartype_ = double; vectortype = tmbutils::vector]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:191:3: required from 'density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:269:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, -1, 1, true>; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, -1, 1, true> >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 1; Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from 'tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from 'Type atomic::Block::norm() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from 'void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Derived = Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:480:24: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = true]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:153:19: required from 'static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from 'static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Block >, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Block >, -1, -1, false>, -1, -1, false>; int Side = 1; int Mode = 5]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from 'void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Block >, -1, -1, false>, -1, -1, false>; _MatrixType = Eigen::Block >, -1, -1, false>, -1, -1, false>; unsigned int _Mode = 5]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:509:37: required from 'void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Block >, -1, -1, false>, -1, -1, false>; _MatrixType = Eigen::Block >, -1, -1, false>, -1, -1, false>; unsigned int _Mode = 5]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:490:62: required from 'static Eigen::Index Eigen::internal::partial_lu_impl::blocked_lu(Eigen::Index, Eigen::Index, Scalar*, Eigen::Index, PivIndex*, PivIndex&, Eigen::Index) [with Scalar = double; int StorageOrder = 0; PivIndex = int; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:509:17: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, -1, -1, false>, -1, -1, false>, Eigen::Block >, -1, -1, false>, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:160:21: required from 'static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from 'static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from 'void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:509:37: required from 'void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:592:25: required from 'void Eigen::LDLT::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:9: required from 'void density::MVNORM_t::setSigma(matrixtype, bool) [with scalartype_ = double; matrixtype = tmbutils::matrix]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:283:19: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1847 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::Matrix >, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Matrix >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Matrix >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1309:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block >, -1, -1, false>, 1, -1, false>; Functor = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block >, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block >, -1, -1, false>, 1, -1, false>; Src = Eigen::Block >, -1, -1, false>, 1, -1, false>; Func = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block >, -1, -1, false>, 1, -1, false>; Src = Eigen::Block >, -1, -1, false>, 1, -1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from 'void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block >, -1, -1, false>, 1, -1, false>; Derived = Eigen::Block >, -1, -1, false>, 1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:390:25: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, 1, -1, false>, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:274:18: required from 'void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>; Func = generic_product_impl >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: required from 'static void Eigen::internal::generic_product_impl::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from 'static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>; Src = Eigen::Product >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>; Func = sub_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from 'ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>; ExpressionType = Eigen::Block >, -1, -1, false>, -1, -1, false>; StorageBase = Eigen::MatrixBase]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:406:53: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48: required from 'void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>; Func = generic_product_impl >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block >, -1, -1, false>, 1, -1, false>, 1, -1, false>, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, 1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:16: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:16: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix >, -1, 1, true> >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:16: required from 'density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(vectortype) [with scalartype_ = double; vectortype = tmbutils::vector]' glmmTMB.cpp:264:40: required from 'Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]' glmmTMB.cpp:494:24: required from 'Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]' glmmTMB.cpp:555:39: required from 'Type objective_function::operator()() [with Type = double]' /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1991:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 1, -1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, 1, -1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase > >, 1, -1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense > >, 1, -1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 1, -1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, 1, -1, true> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl > >, 1, -1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, -1, 1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase > >, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense > >, -1, 1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Transpose > >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose > >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Transpose > >; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block > >, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block > >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block > >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block > >, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block > >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map >; Rhs = Eigen::Transpose > >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose > >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Map >; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Map >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Map >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Transpose > >; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block >, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block >, -1, 1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map >; Rhs = Eigen::Map >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Map >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Map >; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:237:28: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from 'atomic::Block atomic::Block::inverse() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator > >, 1, -1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator > >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator > >, 1, -1, true> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator > >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator > >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator > >, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator > >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block > >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator >, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, 1, -1, false> >, const Eigen::Block > >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Functor = sub_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Func = sub_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from 'Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Derived = Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:305:135: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, -1, false>, -1, -1, false>, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, -1, -1, false>, -1, -1, false>, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, -1, false>, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, -1, false>, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, -1, false>, -1, -1, false>, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Block >, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Block >, -1, -1, false>, -1, -1, false>; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Block >, -1, -1, false>, -1, -1, false>; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Block >, -1, -1, false>, -1, -1, false>; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> > >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose > >, 1, -1, true> >, const Eigen::Block >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:75: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose > >; Rhs = Eigen::Map >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Map >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Transpose > >; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: required from 'void Eigen::internal::generic_dense_assignment_kernel::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator >; SrcEvaluatorTypeT = Eigen::internal::evaluator > >, Eigen::Map >, 1> >; Functor = Eigen::internal::assign_op; int Version = 0; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:16: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:168:27: required from 'void TMBad::MatMul::forward(TMBad::ForwardArgs&) [with Type = double; bool XT = false; bool YT = false; bool ZT = false; bool UP = false]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2504:17: required from 'TMBad::global::ad_segment TMBad::global::add_to_stack(ad_segment, ad_segment, ad_segment) [with OperatorBase = TMBad::MatMul]' /usr/lib/R/site-library/TMB/include/TMBad/ad_blas.hpp:76:58: required from 'void TMBad::matmul(const vmatrix&, const vmatrix&, Eigen::Map >) [with bool XT = false; bool YT = false; bool ZT = false; bool UP = false; vmatrix = Eigen::Matrix]' /usr/lib/R/site-library/TMB/include/TMBad/TMBad.cpp:14:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 24 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, -1, false>, -1, -1, false>, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block >, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/atomic_math.hpp:636:16: required from 'Type atomic::logdet(tmbutils::matrix) [with Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1208:24: required from 'Type newton::log_determinant(const matrix&, PTR) [with Type = TMBad::global::ad_aug; PTR = std::shared_ptr >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1290:27: required from 'Type newton::NewtonSolver::Laplace() [with Functor = newton::slice<>; Type = TMBad::global::ad_aug; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1385:23: required from 'Type newton::Laplace(Functor&, Eigen::Array&, newton_config) [with Functor = slice<>; Type = TMBad::global::ad_aug]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1415:18: required from 'ADFun newton::slice::Laplace_(newton::newton_config) [with ADFun = TMBad::ADFun<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1423:63: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, Eigen::Matrix >, 1, -1, false, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, Eigen::Matrix >, 1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, Eigen::Matrix >, 1, -1, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:1009:11: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from 'atomic::Block atomic::Block::inverse() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, Eigen::Matrix >, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, false>; SrcXprType = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Functor = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, false>; SrcXprType = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Block, Eigen::Matrix >, 1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 26 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from 'void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:106:22: required from 'tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from 'atomic::Block atomic::Block::inverse() [with Type = double]' /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from 'matrix_pade atomic::expm(matrix_pade) [with matrix_pade = nestedTriangle<0>]' /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 2; int noutput = 2; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<1, 2, 2, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 2; int noutput = 2; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<1, 2, 2, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 2; int noutput = 2; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<1, 2, 2, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 4>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 0; int ninput = 2; int noutput = 1; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<0, 2, 1, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:528:1: required from 'void atomic::invpdOp::reverse(TMBad::ReverseArgs) [with Type = double; dummy = void]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::invpdOp<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:528:1: required from 'void atomic::invpdOp::reverse(TMBad::ReverseArgs) [with Type = double; dummy = void]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::invpdOp<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 6>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' distrib.h:40:3: required from 'void glmmtmb::logspace_gammaOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 1; int noutput = 1; long int mask = 1]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = glmmtmb::logspace_gammaOp<1, 1, 1, 1>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1027:20: required from 'void newton::NewtonOperator::reverse(TMBad::ReverseArgs&) [with T = double; Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_dense_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_dense_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:69:7: required from 'class Eigen::InverseImpl >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from 'class Eigen::Inverse > >' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:473:1: required from 'CppAD::vector atomic::matinv(const CppAD::vector&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from 'void atomic::logdetOp::reverse(TMBad::ReverseArgs) [with Type = double; dummy = void]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logdetOp<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:84:17: required from 'newton::vector::vector(const std::vector&) [with Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1010:20: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_dense_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_dense_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::ArrayWrapper > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::ArrayWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::ArrayWrapper > >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:11: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_dense_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_dense_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:130:40: required from 'newton::vector newton::HessianSolveVector::solve(const newton::vector&, const newton::vector&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:150:33: required from 'void newton::HessianSolveVector::forward(TMBad::ForwardArgs&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:916:51: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:600:15: required from 'newton::vector newton::jacobian_sparse_plus_lowrank_t::solve(std::shared_ptr >, const newton::vector&, const newton::vector&) [with T = double; dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1027:38: required from 'void newton::NewtonOperator::reverse(TMBad::ReverseArgs&) [with T = double; Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, const Eigen::SparseMatrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:36:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::SparseMatrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::SparseMatrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:152:11: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::operator()(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1139:18: required from 'void newton::LogDetOperator::reverse(TMBad::ReverseArgs&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::LogDetOperator<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1>, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1>, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1>, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, 1>, Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, 1>, Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:236:22: required from 'newton::matrix newton::jacobian_dense_t::llt_solve(const newton::matrix&, const newton::matrix&) [with Factorization = Eigen::LLT, 1>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_dense_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_dense_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, Eigen::Matrix >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:336:22: required from 'newton::matrix newton::jacobian_sparse_t::llt_solve(const Eigen::SparseMatrix&, const newton::matrix&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:132:51: required from 'newton::vector newton::HessianSolveVector::solve(const newton::vector&, const newton::vector&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:150:33: required from 'void newton::HessianSolveVector::forward(TMBad::ForwardArgs&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:38: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0>, Eigen::Matrix, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0>, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:56: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0>, Eigen::Matrix, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0>, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:565:74: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:565:52: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:565:34: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:255:7: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:83:14: required from 'void Eigen::SimplicialInverseSubset::init_transpose(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:94:5: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::chol2inv() [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:150:15: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::operator()(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1139:18: required from 'void newton::LogDetOperator::reverse(TMBad::ReverseArgs&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::LogDetOperator<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:90:23: required from 'void Eigen::SimplicialInverseSubset::init_transpose(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:94:5: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::chol2inv() [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:150:15: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::operator()(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1139:18: required from 'void newton::LogDetOperator::reverse(TMBad::ReverseArgs&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::LogDetOperator<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:292:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:683:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; _Scalar = int; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:82:39: required from 'void Eigen::SimplicialInverseSubset::init_transpose(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:94:5: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::chol2inv() [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/simplicial_inverse_subset.hpp:150:15: required from 'Eigen::SimplicialInverseSubset::SpMat Eigen::SimplicialInverseSubset::operator()(SpMat) [with T = double; SpMat = Eigen::SparseMatrix]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1139:18: required from 'void newton::LogDetOperator::reverse(TMBad::ReverseArgs&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::LogDetOperator<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Array >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Array > >; Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:894:36: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_dense_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_dense_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:397:50: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = 2; int _Cols = 1; int _Options = 0; int _MaxRows = 2; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 2; int noutput = 2; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<1, 2, 2, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 4>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:397:50: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = 2; int _Cols = 1; int _Options = 0; int _MaxRows = 2; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 0; int ninput = 2; int noutput = 1; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<0, 2, 1, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:39: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = 1; int _Cols = 1; int _Options = 0; int _MaxRows = 1; int _MaxCols = 1]' distrib.h:40:3: required from 'void glmmtmb::logspace_gammaOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 1; int noutput = 1; long int mask = 1]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = glmmtmb::logspace_gammaOp<1, 1, 1, 1>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose >, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose >, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose >, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose >, const Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = 1; int _Cols = 1; int _Options = 0; int _MaxRows = 1; int _MaxCols = 1]' distrib.h:40:3: required from 'void glmmtmb::logspace_gammaOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 1; int ninput = 1; int noutput = 1; long int mask = 1]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = glmmtmb::logspace_gammaOp<1, 1, 1, 1>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:165:20: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:336:22: required from 'newton::matrix newton::jacobian_sparse_t::llt_solve(const Eigen::SparseMatrix&, const newton::matrix&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:132:51: required from 'newton::vector newton::HessianSolveVector::solve(const newton::vector&, const newton::vector&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:150:33: required from 'void newton::HessianSolveVector::forward(TMBad::ForwardArgs&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DiagonalMatrix.h:230:47: required from 'struct Eigen::internal::traits, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/EigenBase.h:41:59: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:336:22: required from 'newton::matrix newton::jacobian_sparse_t::llt_solve(const Eigen::SparseMatrix&, const newton::matrix&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:132:51: required from 'newton::vector newton::HessianSolveVector::solve(const newton::vector&, const newton::vector&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:150:33: required from 'void newton::HessianSolveVector::forward(TMBad::ForwardArgs&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix > >, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, const Eigen::Matrix > >, Eigen::Matrix, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, const Eigen::Matrix > >, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::Matrix > >, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:173:46: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:336:22: required from 'newton::matrix newton::jacobian_sparse_t::llt_solve(const Eigen::SparseMatrix&, const newton::matrix&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:132:51: required from 'newton::vector newton::HessianSolveVector::solve(const newton::vector&, const newton::vector&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:150:33: required from 'void newton::HessianSolveVector::forward(TMBad::ForwardArgs&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >, 2> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from 'class Eigen::TriangularViewImpl >, 2, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:186:58: required from 'class Eigen::TriangularView >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:176:26: required from 'void Eigen::SimplicialCholeskyBase::_solve_impl(const Eigen::MatrixBase&, Eigen::MatrixBase&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Derived = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::SimplicialLLT >; RhsType = Eigen::Matrix; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Matrix >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Matrix >; Func = assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:336:22: required from 'newton::matrix newton::jacobian_sparse_t::llt_solve(const Eigen::SparseMatrix&, const newton::matrix&) [with Factorization = Eigen::SimplicialLLT >]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:132:51: required from 'newton::vector newton::HessianSolveVector::solve(const newton::vector&, const newton::vector&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:150:33: required from 'void newton::HessianSolveVector::forward(TMBad::ForwardArgs&) [with Hessian_Type = newton::jacobian_sparse_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0>, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0>, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0>, Eigen::Matrix, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0>, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Solve, 1>, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:565:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 2>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 2, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 2, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 0>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:565:26: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:565:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, 1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 24 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Transpose >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Matrix; CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 27 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Inverse > >; Derived = Eigen::Map >]' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:473:1: required from 'CppAD::vector atomic::matinv(const CppAD::vector&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from 'void atomic::logdetOp::reverse(TMBad::ReverseArgs) [with Type = double; dummy = void]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logdetOp<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, 1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, -1, 1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:562:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, 1, -1, false>; SrcXprType = Eigen::Block >, 1, -1, false>; Functor = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block >, 1, -1, false>; SrcXprType = Eigen::Block >, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block >, 1, -1, false>; Src = Eigen::Block >, 1, -1, false>; Func = swap_assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block >, 1, -1, false>; Src = Eigen::Block >, 1, -1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from 'void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block >, 1, -1, false>; Derived = Eigen::Block >, 1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:992:18: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Inverse > >; Derived = Eigen::Map >]' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:473:1: required from 'CppAD::vector atomic::matinv(const CppAD::vector&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/atomic_math.hpp:503:1: required from 'void atomic::logdetOp::reverse(TMBad::ReverseArgs) [with Type = double; dummy = void]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logdetOp<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Transpose >, 0>, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Transpose >, 0>, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Transpose >, 0>, Eigen::Matrix, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 0>, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 0>, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 29 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:565:27: required from 'newton::matrix newton::jacobian_sparse_plus_lowrank_t::llt_solve(const sparse_plus_lowrank&, const newton::matrix&) [with dummy = void]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:937:33: required from 'const char* newton::NewtonOperator::newton_iterate(newton::vector&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:1011:5: required from 'void newton::NewtonOperator::forward(TMBad::ForwardArgs&) [with Functor = newton::slice<>; Hessian_Type = newton::jacobian_sparse_plus_lowrank_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1712:28: required from 'void TMBad::global::AddForwardMarkReverseMark::forward(TMBad::ForwardArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement, newton::jacobian_sparse_plus_lowrank_t<> > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:57: required from 'void TMBad::global::Complete::forward(TMBad::ForwardArgs&) [with OperatorBase = newton::NewtonOperator, newton::jacobian_sparse_plus_lowrank_t<> >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2128:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:82:1: required from 'void atomic::logspace_subOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 2; int ninput = 2; int noutput = 4; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logspace_subOp<2, 2, 4, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:82:1: required from 'void atomic::logspace_subOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 2; int ninput = 2; int noutput = 4; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logspace_subOp<2, 2, 4, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:82:1: required from 'void atomic::logspace_subOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 2; int ninput = 2; int noutput = 4; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logspace_subOp<2, 2, 4, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase > >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose > >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:222:57: required from 'newton::vector newton::jacobian_dense_t::crossprod(const newton::vector&, const newton::vector&) [with T = double; Factorization = Eigen::LLT, 1>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:163:45: required from 'void newton::HessianSolveVector::reverse(TMBad::ReverseArgs&) [with T = double; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose > >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Transpose > >, 0, 5>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Transpose > >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Transpose > >, 0>' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:222:35: required from 'newton::vector newton::jacobian_dense_t::crossprod(const newton::vector&, const newton::vector&) [with T = double; Factorization = Eigen::LLT, 1>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:163:45: required from 'void newton::HessianSolveVector::reverse(TMBad::ReverseArgs&) [with T = double; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose > >, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose > >, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >, Eigen::Transpose > >, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >, Eigen::Transpose > >, 0> >' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:222:67: required from 'newton::vector newton::jacobian_dense_t::crossprod(const newton::vector&, const newton::vector&) [with T = double; Factorization = Eigen::LLT, 1>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:163:45: required from 'void newton::HessianSolveVector::reverse(TMBad::ReverseArgs&) [with T = double; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:397:50: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = 2; int _Cols = 1; int _Options = 0; int _MaxRows = 2; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:82:1: required from 'void atomic::logspace_subOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 2; int ninput = 2; int noutput = 4; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::logspace_subOp<2, 2, 4, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::MatrixWrapper > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48: required from 'void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Matrix; Lhs = Eigen::MatrixWrapper >; Rhs = Eigen::Transpose > >; Func = generic_product_impl >, Eigen::Transpose > >, Eigen::DenseShape, Eigen::DenseShape, 5>::set]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:317:41: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:93:54: required from 'newton::matrix::matrix(const Eigen::ArrayBase&) [with Derived = Eigen::ArrayWrapper >, Eigen::Transpose > >, 0> >; Type = double]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:222:15: required from 'newton::vector newton::jacobian_dense_t::crossprod(const newton::vector&, const newton::vector&) [with T = double; Factorization = Eigen::LLT, 1>]' /usr/lib/R/site-library/TMB/include/tmbutils/newton.hpp:163:45: required from 'void newton::HessianSolveVector::reverse(TMBad::ReverseArgs&) [with T = double; Hessian_Type = newton::jacobian_dense_t<>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = newton::HessianSolveVector >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 3; int ninput = 2; int noutput = 8; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<3, 2, 8, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 3; int ninput = 2; int noutput = 8; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<3, 2, 8, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 3; int ninput = 2; int noutput = 8; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<3, 2, 8, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:397:50: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = 2; int _Cols = 1; int _Options = 0; int _MaxRows = 2; int _MaxCols = 1]' /usr/lib/R/site-library/TMB/include/tiny_ad/atomic.hpp:30:1: required from 'void atomic::bessel_kOp::reverse(TMBad::ReverseArgs&) [with Type = double; int order = 3; int ninput = 2; int noutput = 8; long int mask = 9]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:1716:28: required from 'void TMBad::global::AddForwardMarkReverseMark::reverse(TMBad::ReverseArgs&) [with Type = double; OperatorBase = TMBad::global::AddIncrementDecrement > > >]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:57: required from 'void TMBad::global::Complete::reverse(TMBad::ReverseArgs&) [with OperatorBase = atomic::bessel_kOp<3, 2, 8, 9>]' /usr/lib/R/site-library/TMB/include/TMBad/global.hpp:2129:10: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -DTMBAD_FRAMEWORK -I'/usr/lib/R/site-library/TMB/include' -I'/usr/lib/R/site-library/RcppEigen/include' -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/r-base-wZDgjM/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.cpp -o utils.o g++ -std=gnu++14 -shared -L/usr/lib/R/lib -Wl,-z,relro -o glmmTMB.so glmmTMB.o utils.o -fopenmp -L/usr/lib/R/lib -lR "/usr/lib/R/bin/Rscript" -e "cat(as.character(packageVersion('TMB')), '\n', sep="", file='../inst/TMB-version')" "/usr/lib/R/bin/Rscript" -e "cat(as.character(packageVersion('Matrix')), '\n', sep="", file='../inst/Matrix-version')" make[1]: Leaving directory '/build/r-cran-glmmtmb-1.1.5+dfsg/src' make[1]: Entering directory '/build/r-cran-glmmtmb-1.1.5+dfsg/src' make[1]: Leaving directory '/build/r-cran-glmmtmb-1.1.5+dfsg/src' installing to /build/r-cran-glmmtmb-1.1.5+dfsg/debian/r-cran-glmmtmb/usr/lib/R/site-library/00LOCK-r-cran-glmmtmb-1.1.5+dfsg/00new/glmmTMB/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmmTMB) W: Ignoring specified R dependency: R (>= 3.2.0) I: Using r-cran-glmmtmb for Recommends:glmmtmb I: Using r-cran-knitr for Suggests:knitr I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-cran-testthat for Suggests:testthat I: Using r-cran-mass for Suggests:MASS I: Using r-cran-lattice for Suggests:lattice I: Using r-cran-ggplot2 for Suggests:ggplot2 (>= 2.2.1) I: Using r-cran-mlmrev for Suggests:mlmRev I: Using r-cran-bbmle for Suggests:bbmle (>= 1.0.19) I: Using r-cran-pscl for Suggests:pscl I: Using r-cran-coda for Suggests:coda I: Using r-cran-reshape2 for Suggests:reshape2 I: Using r-cran-car for Suggests:car (>= 3.0.6) I: Using r-cran-emmeans for Suggests:emmeans (>= 1.4) I: Using r-cran-estimability for Suggests:estimability W: Cannot find a debian package for Suggests:DHARMa I: Using r-cran-multcomp for Suggests:multcomp W: Cannot find a debian package for Suggests:MuMIn I: Using r-cran-effects for Suggests:effects (>= 4.0-1) W: Cannot find a debian package for Suggests:dotwhisker I: Using r-cran-broom for Suggests:broom I: Using r-cran-broom.mixed for Suggests:broom.mixed I: Using r-cran-plyr for Suggests:plyr I: Using r-cran-png for Suggests:png I: Using r-cran-boot for Suggests:boot W: Cannot find a debian package for Suggests:texreg I: Using r-cran-xtable for Suggests:xtable W: Cannot find a debian package for Suggests:huxtable W: Cannot find a debian package for Suggests:mvabund I: Using r-cran-lme4 for Imports:lme4 (>= 1.1-18.9000) I: Using r-cran-nlme for Imports:nlme I: Using r-cran-numderiv for Imports:numDeriv I: Using r-cran-tmb for LinkingTo:TMB I: Using r-cran-rcppeigen for LinkingTo:RcppEigen I: Use r-cran-glmmtmb as Debian binary package for variables substitution dh_installdocs -O--buildsystem=R dh_installchangelogs -O--buildsystem=R dh_installsystemduser -O--buildsystem=R dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R dh_compress -O--buildsystem=R dh_fixperms -O--buildsystem=R dh_missing -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -O--buildsystem=R dh_gencontrol -O--buildsystem=R dh_md5sums -O--buildsystem=R dh_builddeb -O--buildsystem=R dpkg-deb: building package 'r-cran-glmmtmb-dbgsym' in '../r-cran-glmmtmb-dbgsym_1.1.5+dfsg-4_amd64.deb'. dpkg-deb: building package 'r-cran-glmmtmb' in '../r-cran-glmmtmb_1.1.5+dfsg-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../r-cran-glmmtmb_1.1.5+dfsg-4_amd64.buildinfo dpkg-genchanges --build=binary -O../r-cran-glmmtmb_1.1.5+dfsg-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/768810/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/768810/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/768810 and its subdirectories I: Current time: Sun May 26 01:46:04 +14 2024 I: pbuilder-time-stamp: 1716637564