I: pbuilder: network access will be disabled during build I: Current time: Wed Apr 26 05:55:45 -12 2023 I: pbuilder-time-stamp: 1682531745 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-cgelib_0.7.3-2.dsc] I: copying [./python-cgelib_0.7.3.orig.tar.xz] I: copying [./python-cgelib_0.7.3-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 5 08:11:35 2023 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-cgelib_0.7.3-2.dsc: no acceptable signature found dpkg-source: info: extracting python-cgelib in python-cgelib-0.7.3 dpkg-source: info: unpacking python-cgelib_0.7.3.orig.tar.xz dpkg-source: info: unpacking python-cgelib_0.7.3-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3623612/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='4ee5abae560f4d7598e4ea79bf63a13c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3623612' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TU7wxfCt/pbuilderrc_W45r --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TU7wxfCt/b1 --logfile b1/build.log python-cgelib_0.7.3-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos1-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 09:23 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 00:40 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 22:02 more -rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount -rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:23 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 04:31 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 22:02 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar -rwxr-xr-x 1 root root 14520 Nov 2 04:31 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3623612/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 46 newly installed, 0 to remove and 0 not upgraded. Need to get 25.5 MB of archives. After unpacking 100 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 11 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 34 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Fetched 25.5 MB in 1s (25.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.2-6) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_amd64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:amd64 (3.11.2-6) ... Setting up libexpat1:amd64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19912 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_amd64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../3-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_amd64.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20346 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_amd64.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../06-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.22.4-10_amd64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.38.1-5+b1_amd64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../09-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.11.2-2_amd64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-3_amd64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../23-libelf1_0.188-2.1_amd64.deb ... Unpacking libelf1:amd64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1_amd64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../25-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.2_amd64.deb ... 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Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up python3-setuptools (66.1.1-1) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/python-cgelib-0.7.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-cgelib_0.7.3-2_source.changes dpkg-buildpackage: info: source package python-cgelib dpkg-buildpackage: info: source version 0.7.3-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.11 I: pybuild base:240: python3.11 setup.py clean running clean removing '/build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-cgelib.substvars debian/files rm -fr -- debian/python3-cgelib/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.11 I: pybuild base:240: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.11 I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib copying src/cgelib/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/transformer_mixin.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/savers_mixin.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/pliers_mixin.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/loaders_mixin.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/format_mixin.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/file_mixin.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils copying src/cgelib/utils/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence copying src/cgelib/sequence/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence copying src/cgelib/sequence/SeqHit.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence copying src/cgelib/sequence/Feature.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output copying src/cgelib/output/valueparsers.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output copying src/cgelib/output/result.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output copying src/cgelib/output/parserdict.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output copying src/cgelib/output/exceptions.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output copying src/cgelib/output/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications copying src/cgelib/applications/command.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications copying src/cgelib/applications/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications copying src/cgelib/applications/KMA.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications copying src/cgelib/applications/Blast.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment copying src/cgelib/alignment/read_alignment.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment copying src/cgelib/alignment/aligner.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment copying src/cgelib/alignment/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data copying src/cgelib/output/test_data/test_val_parse_fail.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data copying src/cgelib/output/test_data/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast copying src/cgelib/alignment/blast/read_files.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast copying src/cgelib/alignment/blast/alignment_files.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast copying src/cgelib/alignment/blast/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA copying src/cgelib/alignment/KMA/read_files.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA copying src/cgelib/alignment/KMA/alignment_files.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA copying src/cgelib/alignment/KMA/__init__.py -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA running egg_info creating src/cgelib.egg-info writing src/cgelib.egg-info/PKG-INFO writing dependency_links to src/cgelib.egg-info/dependency_links.txt writing requirements to src/cgelib.egg-info/requires.txt writing top-level names to src/cgelib.egg-info/top_level.txt writing manifest file 'src/cgelib.egg-info/SOURCES.txt' reading manifest file 'src/cgelib.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'src/cgelib.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'cgelib.output.templates_json.beone' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'cgelib.output.templates_json.beone' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'cgelib.output.templates_json.beone' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'cgelib.output.templates_json.beone' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/templates_json creating /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/templates_json/beone copying src/cgelib/output/templates_json/beone/beone.json -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/templates_json/beone copying src/cgelib/output/templates_json/beone/example.json -> /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/templates_json/beone dh_auto_test -O--buildsystem=pybuild pybuild --test -i python{version} -p 3.11 I: pybuild base:240: cd /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build; python3.11 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK rm -fr -- /tmp/dh-xdg-rundir-ekVlHDmb create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-cgelib.substvars rm -fr -- debian/.debhelper/generated/python3-cgelib/ debian/python3-cgelib/ debian/tmp/ dh_auto_install --destdir=debian/python3-cgelib/ -O--buildsystem=pybuild install -m0755 -d /build/python-cgelib-0.7.3/debian/python3-cgelib pybuild --install -i python{version} -p 3.11 --dest-dir /build/python-cgelib-0.7.3/debian/python3-cgelib I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/python-cgelib-0.7.3/debian/python3-cgelib running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing src/cgelib.egg-info/PKG-INFO writing dependency_links to src/cgelib.egg-info/dependency_links.txt writing requirements to src/cgelib.egg-info/requires.txt writing top-level names to src/cgelib.egg-info/top_level.txt reading manifest file 'src/cgelib.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'src/cgelib.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'cgelib.output.templates_json.beone' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'cgelib.output.templates_json.beone' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'cgelib.output.templates_json.beone' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'cgelib.output.templates_json.beone' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) running install_lib creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11 creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/__pycache__ creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/__pycache__ creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA/alignment_files.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/KMA/read_files.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast/alignment_files.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/blast/read_files.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/aligner.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/alignment/read_alignment.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications/Blast.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications/KMA.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/applications/command.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/__pycache__ creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/templates_json creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/templates_json/beone copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/templates_json/beone/example.json -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/templates_json/beone copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/templates_json/beone/beone.json -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/templates_json/beone creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data/__pycache__/test_val_parse_fail.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/test_data/test_val_parse_fail.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/exceptions.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/parserdict.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/result.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/output/valueparsers.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence/Feature.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence/SeqHit.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/sequence/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils creating /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/__pycache__/__init__.cpython-311.pyc -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/__pycache__ copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/file_mixin.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/format_mixin.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/loaders_mixin.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/pliers_mixin.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/savers_mixin.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/utils/transformer_mixin.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils copying /build/python-cgelib-0.7.3/.pybuild/cpython3_3.11_cgelib/build/cgelib/__init__.py -> /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA/alignment_files.py to alignment_files.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/KMA/read_files.py to read_files.cpython-311.pyc /usr/lib/python3.11/dist-packages/cgelib/alignment/KMA/read_files.py:98: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast/alignment_files.py to alignment_files.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/blast/read_files.py to read_files.cpython-311.pyc /usr/lib/python3.11/dist-packages/cgelib/alignment/blast/read_files.py:71: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/aligner.py to aligner.cpython-311.pyc /usr/lib/python3.11/dist-packages/cgelib/alignment/aligner.py:246: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/alignment/read_alignment.py to read_alignment.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications/Blast.py to Blast.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications/KMA.py to KMA.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/applications/command.py to command.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/test_data/test_val_parse_fail.py to test_val_parse_fail.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/exceptions.py to exceptions.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/parserdict.py to parserdict.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/result.py to result.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/output/valueparsers.py to valueparsers.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence/Feature.py to Feature.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence/SeqHit.py to SeqHit.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/__init__.py to __init__.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/file_mixin.py to file_mixin.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/format_mixin.py to format_mixin.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/loaders_mixin.py to loaders_mixin.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/pliers_mixin.py to pliers_mixin.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/savers_mixin.py to savers_mixin.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/utils/transformer_mixin.py to transformer_mixin.cpython-311.pyc byte-compiling /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib/__init__.py to __init__.cpython-311.pyc running install_egg_info Copying src/cgelib.egg-info to /build/python-cgelib-0.7.3/debian/python3-cgelib/usr/lib/python3.11/dist-packages/cgelib-0.7.3.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/python3-cgelib/usr/share/doc/python3-cgelib install -p -m0644 debian/copyright debian/python3-cgelib/usr/share/doc/python3-cgelib/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-cgelib/usr/share/doc/python3-cgelib install -p -m0644 debian/.debhelper/generated/python3-cgelib/dh_installchangelogs.dch.trimmed debian/python3-cgelib/usr/share/doc/python3-cgelib/changelog.Debian dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:179: version: 5.20230130 D: dh_python3 dh_python3:180: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:181: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:182: supported Python versions: 3.11 (default=3.11) D: dh_python3 debhelper:183: source=python-cgelib, binary packages=['python3-cgelib'] D: dh_python3 dh_python3:204: processing package python3-cgelib... D: dh_python3 fs:52: moving files from debian/python3-cgelib/usr/lib/python3.11/dist-packages to debian/python3-cgelib/usr/lib/python3/dist-packages/ D: dh_python3 fs:400: package python3-cgelib details = {'requires.txt': {'debian/python3-cgelib/usr/lib/python3/dist-packages/cgelib-0.7.3.egg-info/requires.txt'}, 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-cgelib D: dh_python3 pydist:173: trying to find dependency for GitPython (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for python-dateutil (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 depends:281: D={'python3-dateutil', 'python3-git', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/python3-cgelib chmod a-x usr/share/doc/python3-cgelib/changelog.Debian gzip -9nf usr/share/doc/python3-cgelib/changelog.Debian cd '/build/python-cgelib-0.7.3' dh_fixperms -O--buildsystem=pybuild find debian/python3-cgelib ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-cgelib/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cgelib/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cgelib/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-cgelib -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cgelib/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-cgelib/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-cgelib/DEBIAN/postinst cat debian/python3-cgelib.postinst.debhelper >> debian/python3-cgelib/DEBIAN/postinst chmod 0755 -- debian/python3-cgelib/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-cgelib/DEBIAN/prerm cat debian/python3-cgelib.prerm.debhelper >> debian/python3-cgelib/DEBIAN/prerm chmod 0755 -- debian/python3-cgelib/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-cgelib/DEBIAN echo misc:Depends= >> debian/python3-cgelib.substvars echo misc:Pre-Depends= >> debian/python3-cgelib.substvars dpkg-gencontrol -ppython3-cgelib -ldebian/changelog -Tdebian/python3-cgelib.substvars -Pdebian/python3-cgelib chmod 0644 -- debian/python3-cgelib/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-cgelib/DEBIAN cd debian/python3-cgelib >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-cgelib/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-cgelib .. dpkg-deb: building package 'python3-cgelib' in '../python3-cgelib_0.7.3-2_all.deb'. dpkg-genbuildinfo --build=binary -O../python-cgelib_0.7.3-2_amd64.buildinfo dpkg-genchanges --build=binary -O../python-cgelib_0.7.3-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3623612 and its subdirectories I: Current time: Wed Apr 26 05:57:25 -12 2023 I: pbuilder-time-stamp: 1682531845