I: pbuilder: network access will be disabled during build I: Current time: Sat May 6 03:26:26 -12 2023 I: pbuilder-time-stamp: 1683386786 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libminc_2.4.05-4.dsc] I: copying [./libminc_2.4.05.orig.tar.gz] I: copying [./libminc_2.4.05-4.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Sep 1 15:39:59 2022 -12 gpgv: using RSA key CBCF64F1F6B7ADC94D8F2A24C9E55E2FADC8F4B9 gpgv: issuer "smr@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libminc_2.4.05-4.dsc: no acceptable signature found dpkg-source: info: extracting libminc in libminc-2.4.05 dpkg-source: info: unpacking libminc_2.4.05.orig.tar.gz dpkg-source: info: unpacking libminc_2.4.05-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build-using-system-find-dot-cmake dpkg-source: info: applying initialize_arrays_in_tests.patch dpkg-source: info: applying disable-dimension-test.patch dpkg-source: info: applying 0005-Fix-setting-of-LIBMINC_USE_FILE_CONFIG-to-be-correct.patch dpkg-source: info: applying 0005-Disable-setting-RPATH.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3106525/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='a738cbfde221476a82adbb8cbf769db3' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3106525' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CiiCbTTr/pbuilderrc_NiGD --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CiiCbTTr/b1 --logfile b1/build.log libminc_2.4.05-4.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 09:23 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 00:40 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 22:02 more -rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount -rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:23 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 22:02 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3106525/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-exec, cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev; however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on libnifti-dev; however: Package libnifti-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu-dev{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnetcdf-dev{a} libnetcdf19{a} libnghttp2-14{a} libnifti-dev{a} libnifti2-2{a} libnifti2-dev{a} libnifticdf-dev{a} libnifticdf2{a} libniftiio-dev{a} libniftiio2{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} libxml2-dev{a} libznz-dev{a} libznz3{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pkg-config pkgconf psmisc publicsuffix wget 0 packages upgraded, 82 newly installed, 0 to remove and 0 not upgraded. Need to get 54.5 MB of archives. After unpacking 217 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 libarchive13 amd64 3.6.2-1 [343 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-9 [386 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libjsoncpp25 amd64 1.9.5-4 [78.6 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 librhash0 amd64 1.4.3-3 [134 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 cmake amd64 3.25.1-1 [8692 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 dh-exec amd64 0.27 [27.8 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 hdf5-helpers amd64 1.10.8+repack1-1 [27.9 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 icu-devtools amd64 72.1-3 [206 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get: 54 http://deb.debian.org/debian bookworm/main amd64 libaec-dev amd64 1.0.6-1+b1 [19.9 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.88.1-9 [381 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libcurl4-gnutls-dev amd64 7.88.1-9 [481 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 libhdf5-cpp-103-1 amd64 1.10.8+repack1-1 [128 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 libhdf5-fortran-102 amd64 1.10.8+repack1-1 [93.3 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-fortran-100 amd64 1.10.8+repack1-1 [44.5 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-cpp-100 amd64 1.10.8+repack1-1 [25.5 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2 [290 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 libjpeg-dev amd64 1:2.1.5-2 [71.8 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 libssl-dev amd64 3.0.8-1 [2427 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 libhdf5-dev amd64 1.10.8+repack1-1 [2615 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 libicu-dev amd64 72.1-3 [10.3 MB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 libnetcdf19 amd64 1:4.9.0-3+b1 [476 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 libxml2-dev amd64 2.9.14+dfsg-1.2 [781 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 libnetcdf-dev amd64 1:4.9.0-3+b1 [113 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 libznz3 amd64 3.0.1-9 [14.0 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 libnifti2-2 amd64 3.0.1-9 [79.2 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 libnifticdf2 amd64 3.0.1-9 [57.1 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 libnifticdf-dev amd64 3.0.1-9 [62.9 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 libniftiio2 amd64 3.0.1-9 [62.0 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libniftiio-dev amd64 3.0.1-9 [71.2 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 libznz-dev amd64 3.0.1-9 [14.3 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libnifti2-dev amd64 3.0.1-9 [98.6 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libnifti-dev all 3.0.1-9 [12.9 kB] Fetched 54.5 MB in 1s (41.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_amd64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... 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Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libicu-dev:amd64 (72.1-3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:amd64 (3.6.2-1) ... Setting up libaec-dev:amd64 (1.0.6-1+b1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-2) ... Setting up libniftiio2:amd64 (3.0.1-9) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libxml2-dev:amd64 (2.9.14+dfsg-1.2) ... Setting up libznz-dev:amd64 (3.0.1-9) ... Setting up libnifti2-2:amd64 (3.0.1-9) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:amd64 (7.88.1-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libniftiio-dev:amd64 (3.0.1-9) ... Setting up libcurl3-gnutls:amd64 (7.88.1-9) ... Setting up libcurl4-gnutls-dev:amd64 (7.88.1-9) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up libhdf5-cpp-103-1:amd64 (1.10.8+repack1-1) ... Setting up cmake (3.25.1-1) ... Setting up libnifti2-dev (3.0.1-9) ... Setting up libnifti-dev (3.0.1-9) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up debhelper (13.11.4) ... Setting up dh-exec (0.27) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.8+repack1-1) ... Setting up libhdf5-fortran-102:amd64 (1.10.8+repack1-1) ... Setting up libnetcdf19:amd64 (1:4.9.0-3+b1) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.8+repack1-1) ... Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev (1:4.9.0-3+b1) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libminc-2.4.05/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libminc_2.4.05-4_source.changes dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.05-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steve M. Robbins dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/libminc-2.4.05' rm -f cmake-modules/*HDF5* dh_auto_configure -- -DLIB_SUFFIX=/x86_64-linux-gnu -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DLIB_SUFFIX=/x86_64-linux-gnu -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON -DLIBMINC_USE_SYSTEM_NIFTI:BOOL=ON .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found NetCDF headers: /usr/include -- Found NetCDF library: /usr/lib/x86_64-linux-gnu/libnetcdf.so -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.13") -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.8") found components: C -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for rint -- Looking for rint - found -- Looking for copysign -- Looking for copysign - found -- Looking for round -- Looking for round - found -- Looking for fabsf -- Looking for fabsf - found -- Looking for srand48 -- Looking for srand48 - found -- Looking for drand48 -- Looking for drand48 - found -- Looking for sleep -- Looking for sleep - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file sys/select.h -- Looking for include file sys/select.h - found LIBMINC_LIBRARIES_CONFIG=minc2;libm.so;libz.so -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/libminc-2.4.05/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/libminc-2.4.05' dh_auto_build cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.05 -B/build/libminc-2.4.05/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.05/obj-x86_64-linux-gnu/CMakeFiles /build/libminc-2.4.05/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05 /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05 /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o [ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o [ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o [ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o [ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o [ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o [ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/free.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/free.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.05/libsrc2/free.c [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.05/libsrc2/dimension.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/convert.c.o -MF CMakeFiles/minc2.dir/libsrc2/convert.c.o.d -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.05/libsrc2/convert.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/datatype.c.o -MF CMakeFiles/minc2.dir/libsrc2/datatype.c.o.d -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.05/libsrc2/datatype.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/convert.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.05/libsrc2/convert.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.05/libsrc2/datatype.c [ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o [ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o [ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.05/libsrc2/grpattr.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/dimension.c.o -MF CMakeFiles/minc2.dir/libsrc2/dimension.c.o.d -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.05/libsrc2/dimension.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/free.c.o -MF 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/label.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/label.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.05/libsrc2/label.c [ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.05/libsrc2/m2util.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/record.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/record.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.05/libsrc2/record.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/hyper.c.o -MF CMakeFiles/minc2.dir/libsrc2/hyper.c.o.d -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.05/libsrc2/hyper.c /build/libminc-2.4.05/libsrc2/convert.c: In function 'miconvert_voxel_to_real': /build/libminc-2.4.05/libsrc2/convert.c:115:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 115 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miset_real_value': /build/libminc-2.4.05/libsrc2/convert.c:264:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 264 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miget_volume_real_range': /build/libminc-2.4.05/libsrc2/convert.c:536:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 536 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/convert.c:562:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 562 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.05/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.05/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:261:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:299:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 299 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': /build/libminc-2.4.05/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': /build/libminc-2.4.05/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': /build/libminc-2.4.05/libsrc2/hyper.c:436:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 436 | ndims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:448:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 448 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:456:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 456 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:499:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 499 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:510:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 510 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_offsets': /build/libminc-2.4.05/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': /build/libminc-2.4.05/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.05/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.05/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.05/libsrc2/hyper.c:680:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 680 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.05/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.05/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': /build/libminc-2.4.05/libsrc2/hyper.c:925:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 925 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, from /build/libminc-2.4.05/libsrc2/minc2.h:11, from /build/libminc-2.4.05/libsrc2/hyper.c:19: /build/libminc-2.4.05/libsrc2/hyper.c:936:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 936 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /build/libminc-2.4.05/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.05/libsrc2/hyper.c:943:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 943 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:944:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 944 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:983:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 983 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:994:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 994 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:1122:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 1122 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.05/libsrc2/hyper.c:261:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:299:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 299 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': /build/libminc-2.4.05/libsrc2/hyper.c:436:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 436 | ndims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:448:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 448 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:456:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 456 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:499:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 499 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:510:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 510 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:680:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 680 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': /build/libminc-2.4.05/libsrc2/hyper.c:925:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 925 | ndims = volume->number_of_dims; | ^~~~~~ In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, from /build/libminc-2.4.05/libsrc2/minc2.h:11, from /build/libminc-2.4.05/libsrc2/hyper.c:19: /build/libminc-2.4.05/libsrc2/hyper.c:936:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 936 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); | ^~~~~ /build/libminc-2.4.05/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.05/libsrc2/hyper.c:943:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 943 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:944:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 944 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:983:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 983 | slice_ndims = ndims; | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:994:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 994 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:1122:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 1122 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.05/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_group': /build/libminc-2.4.05/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_recursion': /build/libminc-2.4.05/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_op': /build/libminc-2.4.05/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.05/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.05/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.05/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.05/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_group': /build/libminc-2.4.05/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_recursion': /build/libminc-2.4.05/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | data->frame_ptr->grp_idx ); | ~~~~~~~~~~~~~~~^~~~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 157 | data->frame_ptr->grp_idx - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_op': /build/libminc-2.4.05/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); | ~~~~^~~~~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.05/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.05/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miconvert_voxel_to_real': /build/libminc-2.4.05/libsrc2/convert.c:115:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 115 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miset_real_value': /build/libminc-2.4.05/libsrc2/convert.c:264:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 264 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miget_volume_real_range': /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.05/libsrc2/convert.c:536:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 536 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.05/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.05/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /build/libminc-2.4.05/libsrc2/convert.c:562:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 562 | buffer = malloc(n * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); | ^ /build/libminc-2.4.05/libsrc2/record.c: In function 'miset_record_field_name': /build/libminc-2.4.05/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': /build/libminc-2.4.05/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.05/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': /build/libminc-2.4.05/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.05/libsrc2/label.c: In function 'miswap4': /build/libminc-2.4.05/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_offsets': /build/libminc-2.4.05/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ /build/libminc-2.4.05/libsrc2/label.c: In function 'miget_label_value_by_index': /build/libminc-2.4.05/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': /build/libminc-2.4.05/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.05/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.05/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.05/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ /build/libminc-2.4.05/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ [ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/label.c.o -MF CMakeFiles/minc2.dir/libsrc2/label.c.o.d -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.05/libsrc2/label.c [ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.05/libsrc2/slice.c [ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o [ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/record.c.o -MF CMakeFiles/minc2.dir/libsrc2/record.c.o.d -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.05/libsrc2/record.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/m2util.c.o -MF CMakeFiles/minc2.dir/libsrc2/m2util.c.o.d -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.05/libsrc2/m2util.c /build/libminc-2.4.05/libsrc2/m2util.c: In function 'midownsample_slice': /build/libminc-2.4.05/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': /build/libminc-2.4.05/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'minc_update_thumbnail': /build/libminc-2.4.05/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /build/libminc-2.4.05/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc1d': /build/libminc-2.4.05/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc2d': /build/libminc-2.4.05/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ /build/libminc-2.4.05/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.05/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/label.c: In function 'miswap4': /build/libminc-2.4.05/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ [ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o /build/libminc-2.4.05/libsrc2/label.c: In function 'miget_label_value_by_index': /build/libminc-2.4.05/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.05/libsrc2/valid.c /build/libminc-2.4.05/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.05/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); | ^~~~~ /build/libminc-2.4.05/libsrc2/record.c: In function 'miset_record_field_name': /build/libminc-2.4.05/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | offset = index * H5Tget_size(ftype_id); | ^ [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.05/libsrc2/volprops.c /build/libminc-2.4.05/libsrc2/m2util.c: In function 'midownsample_slice': /build/libminc-2.4.05/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1491 | x1 = x; | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1492 | y1 = y + ( j * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1493 | z1 = z + ( k * scale ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': /build/libminc-2.4.05/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'minc_update_thumbnail': /build/libminc-2.4.05/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1719 | osize[i] = isize[i] / scale; | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1785 | count[0] = scale; | ^~~~~ /build/libminc-2.4.05/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1800 | start[0] = slice * scale; | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1803 | count[0] = scale; | ^~~~~ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc1d': /build/libminc-2.4.05/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc2d': /build/libminc-2.4.05/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); | ^ /build/libminc-2.4.05/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ [ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.05/libsrc2/volume.c [ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o [ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.05/libsrc2/slice.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.05/libcommon/minc2_error.c /build/libminc-2.4.05/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.05/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /build/libminc-2.4.05/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /build/libminc-2.4.05/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /build/libminc-2.4.05/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /build/libminc-2.4.05/libsrc2/volprops.c: In function 'miset_props_blocking': /build/libminc-2.4.05/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 11%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.05/libsrc2/valid.c [ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.05/libcommon/minc_config.c [ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.05/libcommon/minc_error.c /build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.05/libsrc2/volume.c:124:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:136:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 136 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_create': /build/libminc-2.4.05/libsrc2/volume.c:228:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 228 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:231:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 231 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function 'micreate_volume': /build/libminc-2.4.05/libsrc2/volume.c:638:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 638 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, from /build/libminc-2.4.05/libsrc2/minc2.h:11, from /build/libminc-2.4.05/libsrc2/volume.c:32: /build/libminc-2.4.05/libsrc2/volume.c:668:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 668 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.05/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.05/libsrc2/volume.c:900:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 900 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ /build/libminc-2.4.05/libsrc2/volume.c:904:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 904 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:992:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 992 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ [ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /build/libminc-2.4.05/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.05/libsrc2/volume.c:1175:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1175 | hdim->offsets = malloc(n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1177:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1177 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:1199:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1199 | hdim->widths = malloc(n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1201:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1201 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.05/libsrc2/volprops.c /build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.05/libsrc2/volume.c:1425:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1425 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ /build/libminc-2.4.05/libsrc2/volume.c:1430:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1430 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:1513:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1513 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1514:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1514 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1515:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1515 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ /build/libminc-2.4.05/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.05/libcommon/minc_config.c:87:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 87 | strncpy(buffer, tmp, maxlen); | ^~~~~~ /build/libminc-2.4.05/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.05/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 13%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.05/libsrc2/volume.c /build/libminc-2.4.05/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.05/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); | ^ /build/libminc-2.4.05/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 139 | handle->edge_lengths[i] = dims[i]; | ^~~~ /build/libminc-2.4.05/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, | ^ /build/libminc-2.4.05/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 156 | handle->zlib_level = cd_values[0]; | ^~~~~~~~~ /build/libminc-2.4.05/libsrc2/volprops.c: In function 'miset_props_blocking': /build/libminc-2.4.05/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ [ 14%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o [ 14%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.05/libcommon/ParseArgv.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.05/libcommon/read_file_names.c [ 14%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.05/libcommon/minc2_error.c [ 15%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.05/libcommon/minc_config.c [ 15%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.05/libcommon/minc_error.c [ 16%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2_static.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.05/libcommon/restructure.c /build/libminc-2.4.05/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.05/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /build/libminc-2.4.05/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ [ 17%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o /build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.05/libsrc2/volume.c:124:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:136:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 136 | fd = H5Fopen(path, mode, prp_id); | ^~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_create': /build/libminc-2.4.05/libsrc2/volume.c:228:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 228 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:231:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 231 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.05/libcommon/ParseArgv.c /build/libminc-2.4.05/libsrc2/volume.c: In function 'micreate_volume': /build/libminc-2.4.05/libsrc2/volume.c:638:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 638 | hdf_size[i] = create_props->edge_lengths[i]; | ^~~~~~~~~~~~ In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, from /build/libminc-2.4.05/libsrc2/minc2.h:11, from /build/libminc-2.4.05/libsrc2/volume.c:32: /build/libminc-2.4.05/libsrc2/volume.c:668:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 668 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") | ~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.05/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} | ^~~ /build/libminc-2.4.05/libsrc2/volume.c:900:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 900 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * | ^ /build/libminc-2.4.05/libsrc2/volume.c:904:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 904 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:992:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 992 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ /build/libminc-2.4.05/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.05/libcommon/minc_config.c:87:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 87 | strncpy(buffer, tmp, maxlen); | ^~~~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.05/libsrc2/volume.c:1175:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1175 | hdim->offsets = malloc(n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1177:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1177 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:1199:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1199 | hdim->widths = malloc(n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1201:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1201 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.05/libsrc2/volume.c:1425:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1425 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * | ^ /build/libminc-2.4.05/libsrc2/volume.c:1430:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1430 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:1513:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1513 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1514:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1514 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); | ^ /build/libminc-2.4.05/libsrc2/volume.c:1515:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1515 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ [ 17%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o /build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'ParseArgv': /build/libminc-2.4.05/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; | ^ /build/libminc-2.4.05/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 244 | ParseLong(argv[srcIndex], &endPtr); | ^~~~~~~~~ /build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.05/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /build/libminc-2.4.05/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.05/libcommon/read_file_names.c /build/libminc-2.4.05/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.05/libcommon/restructure.c:137:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] 137 | offset_next = -1; /* Initialize. */ | ^ [ 17%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.05/libcommon/time_stamp.c [ 17%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o /build/libminc-2.4.05/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.05/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 53 | files = malloc(sizeof(*files) * array_size); | ^ /build/libminc-2.4.05/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.05/libcommon/restructure.c [ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.05/libsrc/dim_conversion.c [ 18%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.05/libcommon/time_stamp.c /build/libminc-2.4.05/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.05/libcommon/restructure.c:137:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] 137 | offset_next = -1; /* Initialize. */ | ^ [ 18%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o /build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'ParseArgv': /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.05/libsrc/dim_conversion.c /build/libminc-2.4.05/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; | ^ /build/libminc-2.4.05/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 244 | ParseLong(argv[srcIndex], &endPtr); | ^~~~~~~~~ /build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.05/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^ /build/libminc-2.4.05/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ [ 19%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.05/libsrc/image_conversion.c [ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.05/libsrc/image_conversion.c [ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.05/libsrc/minc_convenience.c /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.05/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; | ^~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 395 | icvp->derv_dim_scale[idim] = 1 + | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 446 | ( user_dim_size - | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c:455:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 455 | ( user_dim_size - 1 - | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c:479:30: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 479 | dimstart -= dimstep * (icvp->var_dim_size[idim]-1); | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_bufsize_step': /build/libminc-2.4.05/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; | ^~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/dim_conversion.c:93: /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.05/libsrc/nd_loop.c /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.05/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqdbl': /build/libminc-2.4.05/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 703 | *value = icvp->user_dim_size[0]; break; | ^~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 705 | *value = icvp->user_dim_size[1]; break; | ^~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 728 | *value = icvp->user_dim_size[idim]; | ^~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqint': /build/libminc-2.4.05/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqlong': /build/libminc-2.4.05/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/image_conversion.c:173: /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ [ 21%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.05/libsrc/minc_convenience.c In file included from /build/libminc-2.4.05/libsrc2/volume.c:33: In function '_miget_file_dimension', inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: /build/libminc-2.4.05/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:1220:17: note: in expansion of macro 'MI_ROOT_PATH' 1220 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.05/libsrc2/volume.c:1753:53: note: format string is defined here 1753 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/include/stdio.h:906, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /build/libminc-2.4.05/libsrc2/volume.c:8: In function 'sprintf', inlined from '_miget_file_dimension' at /build/libminc-2.4.05/libsrc2/volume.c:1220:3, inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.05/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 408 | icvp->user_do_norm = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 411 | icvp->user_user_norm = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 420 | icvp->user_do_fillvalue = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 426 | icvp->user_do_dimconv = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 429 | icvp->user_do_scalar = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 432 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 437 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 442 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 447 | ival = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 455 | icvp->user_dim_size[0] = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 458 | icvp->user_dim_size[1] = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 461 | icvp->user_keep_aspect = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 475 | icvp->user_dim_size[idim] = value; | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqdbl': /build/libminc-2.4.05/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 703 | *value = icvp->user_dim_size[0]; break; | ^~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 705 | *value = icvp->user_dim_size[1]; break; | ^~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 728 | *value = icvp->user_dim_size[idim]; | ^~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqint': /build/libminc-2.4.05/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 774 | *value = dvalue; | ^~~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqlong': /build/libminc-2.4.05/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ [ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/image_conversion.c:173: /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/netcdf_convenience.c /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.05/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miattput_pointer': /build/libminc-2.4.05/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/minc_convenience.c:152: /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miadd_child': /build/libminc-2.4.05/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89: /build/libminc-2.4.05/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.05/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.05/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miappend_history': /build/libminc-2.4.05/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.05/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 431 | fval[1] = valid_range[1]; | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miattput_pointer': /build/libminc-2.4.05/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); | ^~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/minc_convenience.c:152: /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miadd_child': /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.05/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; | ^~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89: /build/libminc-2.4.05/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 395 | icvp->derv_dim_scale[idim] = 1 + | ^ /build/libminc-2.4.05/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.05/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~ /build/libminc-2.4.05/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); | ^~~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 446 | ( user_dim_size - | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c:455:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 455 | ( user_dim_size - 1 - | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c:479:30: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 479 | dimstart -= dimstep * (icvp->var_dim_size[idim]-1); | ^ /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_bufsize_step': /build/libminc-2.4.05/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; | ^~~~ /build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miappend_history': /build/libminc-2.4.05/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/dim_conversion.c:93: /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ [ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.05/libsrc/value_conversion.c In file included from /build/libminc-2.4.05/libsrc2/volume.c:33: In function '_miget_file_dimension', inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: /build/libminc-2.4.05/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c:1220:17: note: in expansion of macro 'MI_ROOT_PATH' 1220 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); | ^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.05/libsrc2/volume.c:1753:53: note: format string is defined here 1753 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", | ^~ In file included from /usr/include/stdio.h:906, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /build/libminc-2.4.05/libsrc2/volume.c:8: In function 'sprintf', inlined from '_miget_file_dimension' at /build/libminc-2.4.05/libsrc2/volume.c:1220:3, inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miexpand_file': /build/libminc-2.4.05/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.05/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ [ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.05/libsrc/voxel_loop.c [ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o [ 23%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/hdf_convenience.c [ 24%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.05/libsrc/minc_compat.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.05/libsrc/nd_loop.c /build/libminc-2.4.05/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.05/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/value_conversion.c:98: /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 24%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/netcdf_convenience.c /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.05/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_variables': /build/libminc-2.4.05/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 970 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'update_history': /build/libminc-2.4.05/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'do_voxel_loop': /build/libminc-2.4.05/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1347 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1714 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_looping': /build/libminc-2.4.05/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1800 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.05/libsrc/hdf_convenience.c:205:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 205 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89, from /build/libminc-2.4.05/libsrc/hdf_convenience.c:8: /build/libminc-2.4.05/libsrc/hdf_convenience.c:212:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 212 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.05/libsrc/hdf_convenience.c:373:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 373 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:374:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 374 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attname': /build/libminc-2.4.05/libsrc/hdf_convenience.c:458:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 458 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:461:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 461 | status = H5Aget_name(att_id, MAX_NC_NAME, name); | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attinq': /build/libminc-2.4.05/libsrc/hdf_convenience.c:581:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 581 | *length_ptr = typ_size; | ^~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:584:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 584 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': /build/libminc-2.4.05/libsrc/hdf_convenience.c:670:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 670 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_dimdef': /build/libminc-2.4.05/libsrc/hdf_convenience.c:961:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 961 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attput': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1150:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1150 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1188:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1188 | hsize_t temp_size = val_len; | ^~~~~~~ /build/libminc-2.4.05/libsrc/minc_compat.c: In function 'MI2attcopy': [ 24%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1325:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1325 | dims[i] = length; | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1372:60: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1372 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84: /build/libminc-2.4.05/libsrc/hdf_convenience.c:1376:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1376 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1376:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1376 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.05/libsrc/value_conversion.c /build/libminc-2.4.05/libsrc/hdf_convenience.c:1384:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1384 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1389:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1389 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1421:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1421 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ [ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varget': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1537:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1537 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1538:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1538 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varputg': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1636:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1636 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1652:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1652 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1661:29: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1661 | myedges[idim] = edges[idim]; | ^~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.05/libsrc/minc_simple.c /build/libminc-2.4.05/libsrc/hdf_convenience.c:1685:36: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1685 | length[idim] = mymap[idim] * myedges[idim]; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1686:52: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1686 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1743:23: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1743 | mystart[idim] += mystride[idim]; | ^~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1745:29: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1745 | mystart[idim] = start[idim]; | ^~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vargetg': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1813:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1813 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1840:46: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1840 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1840:29: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] 1840 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varput': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1960:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1960 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1961:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1961 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varsize': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2072:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 2072 | size_ptr[i] = dims[i]; | ^~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2106:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2106 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_open': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2228:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2228 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2245:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2245 | file_id = H5Fopen(path, mode, fpid); | ^~~~ [ 25%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c:2255:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2255 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2277:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2277 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_create': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2339:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2339 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2351:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2351 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.05/libsrc/voxel_loop.c [ 25%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/hdf_convenience.c [ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.05/libsrc/minc_format_convert.c In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miexpand_file': /build/libminc-2.4.05/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 380 | compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char); | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.05/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.05/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/value_conversion.c:98: /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' 166 | *((signed char *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' 180 | *((signed short *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' 194 | *((signed int *) ptr) = ROUND(dvalue); \ | ^~~~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ | ^~~ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ [ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour_def.c [ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.05/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc.h:172, from /build/libminc-2.4.05/libsrc/minc_private.h:83, from /build/libminc-2.4.05/libsrc/minc_simple.c:38: /build/libminc-2.4.05/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /build/libminc-2.4.05/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /build/libminc-2.4.05/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /build/libminc-2.4.05/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /build/libminc-2.4.05/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_transform_to_world': /build/libminc-2.4.05/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1026 | input[0] = voxel[spatial_axes[0]]; | ^~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1027 | input[1] = voxel[spatial_axes[1]]; | ^~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1028 | input[2] = voxel[spatial_axes[2]]; | ^~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour.c /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.05/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_variables': /build/libminc-2.4.05/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 970 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'update_history': /build/libminc-2.4.05/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'do_voxel_loop': /build/libminc-2.4.05/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1347 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1714 | num_output_files, block_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_looping': /build/libminc-2.4.05/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1800 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ [ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.05/volume_io/Geometry/gaussian.c /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.05/libsrc/hdf_convenience.c:205:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 205 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89, from /build/libminc-2.4.05/libsrc/hdf_convenience.c:8: /build/libminc-2.4.05/libsrc/hdf_convenience.c:212:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 212 | MI_LOG_ERROR(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims); | ^ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.05/libsrc/hdf_convenience.c:373:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 373 | int typ_size = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:374:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 374 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attname': /build/libminc-2.4.05/libsrc/hdf_convenience.c:458:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 458 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:461:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 461 | status = H5Aget_name(att_id, MAX_NC_NAME, name); | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attinq': /build/libminc-2.4.05/libsrc/hdf_convenience.c:581:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 581 | *length_ptr = typ_size; | ^~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:584:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 584 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder': /build/libminc-2.4.05/libsrc/hdf_convenience.c:670:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 670 | length = H5Tget_size(typ_id); | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_dimdef': /build/libminc-2.4.05/libsrc/hdf_convenience.c:961:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 961 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attput': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1150:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1150 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1188:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1188 | hsize_t temp_size = val_len; | ^~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1325:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1325 | dims[i] = length; | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1372:60: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1372 | if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) { | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84: /build/libminc-2.4.05/libsrc/hdf_convenience.c:1376:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1376 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1376:81: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1376 | (hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) ); | ^ /build/libminc-2.4.05/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1384:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1384 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1389:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1389 | H5Pset_deflate(prp_id, comp_level); | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1421:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1421 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varget': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1537:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1537 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1538:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1538 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varputg': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1636:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1636 | mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1652:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1652 | mystart[idim] = start != NULL ? start[idim] : 0; | ^~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1661:29: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1661 | myedges[idim] = edges[idim]; | ^~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1685:36: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1685 | length[idim] = mymap[idim] * myedges[idim]; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1686:52: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1686 | stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1743:23: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1743 | mystart[idim] += mystride[idim]; | ^~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1745:29: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1745 | mystart[idim] = start[idim]; | ^~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vargetg': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1813:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1813 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1840:46: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1840 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ [ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c:1840:29: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] 1840 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varput': /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.05/volume_io/Geometry/inverse.c /build/libminc-2.4.05/libsrc/hdf_convenience.c:1960:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1960 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1961:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1961 | count[i] = length_ptr[i]; | ^~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varsize': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2072:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 2072 | size_ptr[i] = dims[i]; | ^~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2106:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2106 | if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_open': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2228:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2228 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2245:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2245 | file_id = H5Fopen(path, mode, fpid); | ^~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2255:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2255 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2277:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2277 | dims[ndims++] = H5Tget_nmembers(type_id); | ^~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_create': /build/libminc-2.4.05/libsrc/hdf_convenience.c:2339:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2339 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2351:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2351 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ [ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.05/volume_io/Geometry/newton.c [ 29%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.05/libsrc/minc_compat.c [ 29%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.05/libsrc/minc_simple.c [ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.05/volume_io/Geometry/points.c [ 30%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.05/libsrc/minc_format_convert.c [ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.05/volume_io/Geometry/splines.c [ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o /build/libminc-2.4.05/libsrc/minc_compat.c: In function 'MI2attcopy': /build/libminc-2.4.05/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.05/volume_io/Geometry/tensors.c [ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.05/volume_io/Geometry/transforms.c [ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c [ 32%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour.c [ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour_def.c /build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.05/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; | ^~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ In file included from /build/libminc-2.4.05/libsrc/minc.h:172, from /build/libminc-2.4.05/libsrc/minc_private.h:83, from /build/libminc-2.4.05/libsrc/minc_simple.c:38: /build/libminc-2.4.05/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 67 | #define nctypelen MI2typelen /build/libminc-2.4.05/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), | ^~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * | ^ /build/libminc-2.4.05/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * | ^ /build/libminc-2.4.05/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 446 | p_var->var_atts = malloc(p_var->var_natts * | ^ /build/libminc-2.4.05/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_transform_to_world': /build/libminc-2.4.05/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1026 | input[0] = voxel[spatial_axes[0]]; | ^~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1027 | input[1] = voxel[spatial_axes[1]]; | ^~~~~ /build/libminc-2.4.05/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1028 | input[2] = voxel[spatial_axes[2]]; | ^~~~~ [ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xfs.c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c [ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.05/volume_io/Geometry/gaussian.c [ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.05/volume_io/Geometry/inverse.c [ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.05/volume_io/Geometry/newton.c [ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.05/volume_io/Geometry/points.c [ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/mni_io.c [ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/tag_points.c In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:18: /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' 532 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ [ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/thin_plate_spline.c [ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.05/volume_io/Geometry/splines.c [ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.05/volume_io/Geometry/tensors.c [ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.05/volume_io/Geometry/transforms.c [ 38%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c [ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc.c [ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xfs.c [ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc_check.c [ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/arrays.c [ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/files.c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ [ 41%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c [ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/print.c [ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c [ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/string.c /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.05/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'io_quoted_string': /build/libminc-2.4.05/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/mni_io.c In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:18: /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' 532 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ [ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o [ 44%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/tag_points.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/time.c [ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': /build/libminc-2.4.05/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 222 | progress->n_dots_so_far = n_dots; | ^~~~~~ /build/libminc-2.4.05/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.05/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': /build/libminc-2.4.05/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ [ 44%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o [ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/get_hyperslab.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/thin_plate_spline.c [ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_free.c [ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c [ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc.c /build/libminc-2.4.05/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ [ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.05/volume_io/Volumes/multidim_arrays.c [ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o [ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_volume.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/arrays.c In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:19: /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' 238 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' 239 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' 240 | k = VIO_FLOOR( z ); | ^~~~~~~~~ [ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/files.c [ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc_check.c [ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' 404 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' 405 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' 406 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' 407 | l = VIO_FLOOR( t ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' 408 | m = VIO_FLOOR( v ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 613 | slab_size *= file->sizes_in_file[d]; | ^~~~ In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:21: /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' 616 | slab_size *= MIN( file->sizes_in_file[d], | ^~~ In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:20: /build/libminc-2.4.05/volume_io/Volumes/input_volume.c: In function 'input_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ [ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/print.c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1473 | slab_size *= count[d]; | ^~~~~ [ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.05/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'io_quoted_string': /build/libminc-2.4.05/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ [ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o [ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/string.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_volume.c [ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/time.c [ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': /build/libminc-2.4.05/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 222 | progress->n_dots_so_far = n_dots; | ^~~~~~ [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/set_hyperslab.c /build/libminc-2.4.05/volume_io/Prog_utils/string.c: In function 'create_string': [ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /build/libminc-2.4.05/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': /build/libminc-2.4.05/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volume_cache.c /build/libminc-2.4.05/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:19: /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' 238 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' 239 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' 240 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' 404 | i = VIO_FLOOR( x ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' 405 | j = VIO_FLOOR( y ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' 406 | k = VIO_FLOOR( z ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' 407 | l = VIO_FLOOR( t ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' 408 | m = VIO_FLOOR( v ); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ^ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ [ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o [ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/get_hyperslab.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_free.c [ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c [ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volumes.c [ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_volume.c [ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c [ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.05/volume_io/Volumes/multidim_arrays.c /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 613 | slab_size *= file->sizes_in_file[d]; | ^~~~ In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:21: /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' 616 | slab_size *= MIN( file->sizes_in_file[d], | ^~~ In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:20: /build/libminc-2.4.05/volume_io/Volumes/input_volume.c: In function 'input_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) | ~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 499 | slab_size *= file->sizes_in_file[d]; | ^~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ [ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c [ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_volume.c [ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/set_hyperslab.c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1473 | slab_size *= count[d]; | ^~~~~ [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c [ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volume_cache.c [ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volumes.c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1214 | slab_size *= count[d]; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 2847 | ((float *) dst)[i] = value; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); | ^ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ [ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] 153 | file->sizes_in_file[d] = dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 179 | slices_count*=dimension_size[d]; | ^~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 179 | slices_count*=dimension_size[d]; | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 499 | slab_size *= file->sizes_in_file[d]; | ^~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; | ^ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1214 | slab_size *= count[d]; | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ [ 60%] Linking C shared library libminc2.so /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.3.0 -o libminc2.so.5.3.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o 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/usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl [ 60%] Linking C static library libminc2_static.a /usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 /usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o 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'/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build [ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o [ 61%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -MF CMakeFiles/minc_io.dir/minc_1_rw.cpp.o.d -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.05/ezminc/minc_1_rw.cpp [ 62%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o [ 62%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o -MF CMakeFiles/icv_vec.dir/icv_vec.c.o.d -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.05/testdir/icv_vec.c make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o -MF CMakeFiles/icv_dim1.dir/icv_dim1.c.o.d -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.05/testdir/icv_dim1.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -MF CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o.d -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.05/ezminc/minc_1_simple_rw.cpp make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_tst.dir/minc.c.o -MF CMakeFiles/minc_tst.dir/minc.c.o.d -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.05/testdir/minc.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend [ 62%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -MF CMakeFiles/icv_dim.dir/icv_dim.c.o.d -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.05/testdir/icv_dim.c make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= [ 62%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o [ 63%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o [ 63%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o [ 63%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_types.dir/minc_types.c.o -MF CMakeFiles/minc_types.dir/minc_types.c.o.d -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.05/testdir/minc_types.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv.dir/icv.c.o -MF CMakeFiles/icv.dir/icv.c.o.d -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.05/testdir/icv.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_range.dir/icv_range.c.o -MF CMakeFiles/icv_range.dir/icv_range.c.o.d -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.05/testdir/icv_range.c [ 64%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -MF CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o.d -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.05/testdir/icv_fillvalue.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/mincapi.dir/mincapi.c.o -MF CMakeFiles/mincapi.dir/mincapi.c.o.d -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.05/testdir/mincapi.c [ 65%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o -MF CMakeFiles/test_mconv.dir/test_mconv.c.o.d -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.05/testdir/test_mconv.c [ 66%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -MF CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o.d -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.05/testdir/minc_long_attr.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/testdir/minc.c: In function 'main': /build/libminc-2.4.05/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 60 | ioff=(j*count[1]+i)*count[2]; | ^ [ 66%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -MF CMakeFiles/minc_conversion.dir/minc_conversion.c.o.d -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.05/testdir/minc_conversion.c [ 66%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/volume_test.dir/volume_test.c.o -MF CMakeFiles/volume_test.dir/volume_test.c.o.d -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.05/testdir/volume_test.c /build/libminc-2.4.05/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.05/testdir/icv_vec.c:65:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); | ^ /build/libminc-2.4.05/testdir/icv_vec.c:66:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 66 | double *dvalue = malloc(N_ELEMENTS * sizeof(double)); | ^ /build/libminc-2.4.05/testdir/icv_vec.c:41:24: warning: conversion from 'int' to 'short int' may change value [-Wconversion] 41 | #define TVAL(z,y,x,v) ((z)*1000+(y)*100+(x)*10+(v)) | ^ /build/libminc-2.4.05/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ [ 67%] Linking C executable minc_types [ 68%] Linking C executable minc_tst cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 /build/libminc-2.4.05/testdir/mincapi.c: In function 'test3': /build/libminc-2.4.05/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; | ^~ /build/libminc-2.4.05/testdir/mincapi.c: In function 'test4': /build/libminc-2.4.05/testdir/mincapi.c:269:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 269 | total *= dims[i].length; | ^~ /build/libminc-2.4.05/testdir/mincapi.c:352:21: warning: conversion from 'int' to 'float' may change value [-Wconversion] 352 | float tmp = (i * 10000) + (j * 100) + k; | ^ cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 /build/libminc-2.4.05/testdir/mincapi.c: In function 'test5': /build/libminc-2.4.05/testdir/mincapi.c:409:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 409 | total *= dims[TST_X].length; | ^~ /build/libminc-2.4.05/testdir/mincapi.c:410:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 410 | total *= dims[TST_Y].length + YBOOST; | ^~ /build/libminc-2.4.05/testdir/mincapi.c:411:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 411 | total *= dims[TST_Z].length + ZBOOST; | ^~ /build/libminc-2.4.05/testdir/mincapi.c: In function 'test7': /build/libminc-2.4.05/testdir/mincapi.c:644:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 644 | total *= dims[i].length; | ^~ /build/libminc-2.4.05/testdir/mincapi.c: In function 'main': /build/libminc-2.4.05/testdir/mincapi.c:799:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 799 | return (errors); | ^ /build/libminc-2.4.05/testdir/minc_long_attr.c: In function 'test1': /build/libminc-2.4.05/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); | ~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/testdir/minc_long_attr.c:126:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 126 | memset(ip->large_attribute,'X',ip->attribute_size-1); | ~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/testdir/minc_long_attr.c: In function 'test3': /build/libminc-2.4.05/testdir/minc_long_attr.c:207:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 207 | total *= dims[i].length; | ^~ /build/libminc-2.4.05/testdir/minc_long_attr.c:257:14: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 257 | att=malloc(att_length); | ^~~~~~~~~~ /build/libminc-2.4.05/testdir/minc_long_attr.c:262:37: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 262 | if(memcmp(att,ip->large_attribute,att_length)!=0) | ^~~~~~~~~~ /build/libminc-2.4.05/testdir/minc_long_attr.c: In function 'main': /build/libminc-2.4.05/testdir/minc_long_attr.c:298:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 298 | return (errors); | ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 69%] Linking C executable icv_dim cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 [ 70%] Linking C executable icv [ 70%] Linking C executable icv_fillvalue cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 70%] Linking C executable icv_dim1 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc_conversion.c: In function 'test2': /build/libminc-2.4.05/testdir/minc_conversion.c:163:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 163 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c:163:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] 163 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c:163:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] 163 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c: In function 'test3': /build/libminc-2.4.05/testdir/minc_conversion.c:201:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 201 | total *= dims[i].length; | ^~ /build/libminc-2.4.05/testdir/minc_conversion.c:272:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 272 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c:272:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] 272 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c:272:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] 272 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c: In function 'test4': /build/libminc-2.4.05/testdir/minc_conversion.c:377:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] 377 | float tmp = (i * 10000) + (j * 100) + k; | ^ /build/libminc-2.4.05/testdir/minc_conversion.c: In function 'main': /build/libminc-2.4.05/testdir/minc_conversion.c:423:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 423 | return (errors); | ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 70%] Linking C executable test_mconv /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 70%] Linking C executable icv_range cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 [ 70%] Linking C executable minc_long_attr cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 70%] Linking C executable icv_vec make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 70%] Built target minc_tst make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= [ 71%] Linking C executable minc_conversion cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 71%] Built target icv_dim make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 71%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -MF CMakeFiles/multidim_test.dir/multidim_test.c.o.d -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.05/testdir/multidim_test.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 71%] Built target icv_fillvalue [ 71%] Built target test_mconv make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= [ 72%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -MF CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o.d -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/test-xfm.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build [ 72%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -MF CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o.d -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/copy-xfm.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 72%] Built target minc_types make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend [ 73%] Linking C executable volume_test make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 [ 74%] Linking C executable mincapi cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 [ 75%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -MF CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o.d -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.05/testdir/create_grid_xfm.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 75%] Built target icv_dim1 make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= [ 75%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -MF CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o.d -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 75%] Built target minc_long_attr make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 75%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -MF CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o.d -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.05/testdir/test_arg_parse.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build [ 75%] Built target icv_range make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= [ 75%] Built target icv make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= [ 75%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -MF CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o.d -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.05/testdir/minc2-convert-test.c [ 75%] Built target icv_vec make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' In file included from /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:23: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; [ 75%] Linking C executable test_xfm make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 75%] Linking C executable copy_xfm /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o" -o test_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 [ 75%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -MF CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o.d -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.05/testdir/minc2-create-test-images.c [ 75%] Built target minc_conversion make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= [ 76%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o [ 76%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -MF CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o.d -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -MF CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o.d -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.05/testdir/minc2-datatype-test.c /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:593:51: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 593 | _info[i].start+=_info[i].step*(dimlength-1); | ~~~~~~~~~~^~~ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o" -o copy_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:656:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 656 | _slab_len*=_info[_ndims-i-1].length; | ^~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::open(const char*, const minc::minc_info&, int, nc_type, int)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:710:22: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 710 | _ndims=_info.size(); | ~~~~~~~~~~^~ [ 76%] Linking C executable create_grid_xfm /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:744:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 744 | _slab_len*=_info[_ndims-i-1].length; | ^~~~~~ cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 In file included from /build/libminc-2.4.05/ezminc/minc_1_simple.h:18, from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:18, from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.cpp:18: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.05/ezminc/minc_1_rw.h:21: /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_float()': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:840:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 840 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:841:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 841 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:848:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 848 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:849:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 849 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:855:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 855 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:856:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 856 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_double()': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:916:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 916 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:917:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 917 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:924:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 924 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:925:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 925 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:931:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 931 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:932:92: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 932 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ /build/libminc-2.4.05/testdir/minc2-convert-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 97 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-convert-test.c:98:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 98 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-convert-test.c:99:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 99 | coords[2] = k; | ^ /build/libminc-2.4.05/testdir/minc2-convert-test.c:101:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 101 | voxel[0] = coords[0]; | ^~~~~~ /build/libminc-2.4.05/testdir/minc2-convert-test.c:102:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 102 | voxel[1] = coords[1]; | ^~~~~~ /build/libminc-2.4.05/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 103 | voxel[2] = coords[2]; | ^~~~~~ make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::append_history(const char*)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1457:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1457 | att_length += strlen(append_history) + 1; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const char*)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1486:76: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1486 | ncattput(_mincid, create_var_id(varname),attname, NC_CHAR, strlen(val) + 1, val); | ~~~~~~~~~~~~^~~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1491:74: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1491 | ncattput(_mincid, create_var_id(varname),attname, NC_DOUBLE, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1496:71: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1496 | ncattput(_mincid, create_var_id(varname),attname, NC_INT, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1501:73: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1501 | ncattput(_mincid, create_var_id(varname),attname, NC_SHORT, val.size(), &val[0]); | ~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_base::insert(const char*, const char*, const std::vector&)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1506:72: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1506 | ncattput(_mincid, create_var_id(varname),attname, NC_BYTE, val.size(), &val[0]); | ~~~~~~~~^~ [ 76%] Linking C executable test_arg_parse /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 [ 76%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o /build/libminc-2.4.05/testdir/minc2-create-test-images.c: In function 'create_3D_image': /build/libminc-2.4.05/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 137 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-create-test-images.c: In function 'create_4D_image': /build/libminc-2.4.05/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 210 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 212 | start[1] = j; | ^ cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -MF CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o.d -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.05/testdir/minc2-large-attribute.c /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image': /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from 'int' to 'float' may change value [-Wconversion] 143 | buf[i] = i * 0.001f; | ^ /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 76%] Linking C executable minc2-datatype-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 [ 77%] Linking C executable verify_xfm make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o" -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 77%] Built target mincapi make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend /build/libminc-2.4.05/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.05/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-large-attribute.c:90:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 90 | attribute=malloc(attribute_size); | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/testdir/minc2-large-attribute.c:91:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 91 | memset(attribute,'Z',attribute_size-1); | ~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= [ 78%] Linking C executable minc2-convert-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o" -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 78%] Built target volume_test make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 79%] Linking C executable minc2-create-test-images [ 79%] Linking C executable minc2-create-test-images-2 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 [ 80%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -MF CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o.d -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.05/testdir/minc2-full-test.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o" -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o" -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 80%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -MF CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o.d -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.05/testdir/minc2-grpattr-test.c [ 80%] Linking C executable minc2-large-attribute make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o" -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.05/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:112:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 112 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:113:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 113 | coords[2] = k; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c: In function 'test2': /build/libminc-2.4.05/testdir/minc2-full-test.c:227:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 227 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:228:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 228 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:229:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 229 | coords[2] = k; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:231:30: warning: conversion from 'int' to 'float' may change value [-Wconversion] 231 | fcmpl.real = (i * 100) + j; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:232:30: warning: conversion from 'int' to 'float' may change value [-Wconversion] 232 | fcmpl.imag = k; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:249:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 249 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:250:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 250 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ [ 80%] Built target copy_xfm make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend [ 80%] Built target test_xfm make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 81%] Linking C executable multidim_test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 81%] Built target test_arg_parse make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= [ 81%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o [ 81%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -MF CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o.d -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.05/testdir/minc2-hyper-test-2.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -MF CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o.d -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.05/testdir/minc2-hyper-test.c /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 81%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -MF CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o.d -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.05/testdir/minc2-label-test.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 81%] Built target create_grid_xfm make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= [ 82%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -MF CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o.d -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.05/testdir/minc2-multires-test.c /build/libminc-2.4.05/testdir/minc2-hyper-test-2.c: In function 'create_test_file': /build/libminc-2.4.05/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | start[0] = i; | ^ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build /build/libminc-2.4.05/testdir/minc2-hyper-test.c: In function 'create_and_test_image': /build/libminc-2.4.05/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:262:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 262 | start[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:263:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 263 | start[2] = k; | ^ /build/libminc-2.4.05/testdir/minc2-hyper-test.c: In function 'test1': /build/libminc-2.4.05/testdir/minc2-hyper-test.c:393:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] 393 | short t = stemp[i][j][k]; | ^~~~~ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:418:31: warning: conversion to 'short int' from 'int' may change the sign of the result [-Wsign-conversion] 418 | short t = stemp[i][j][k] ^ 0x5555; | ^~~~~ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:424:38: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 424 | stemp[i][j][k] = t; | ^ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] 458 | short t = stmp2[i][j][k]; | ^~~~~ /build/libminc-2.4.05/testdir/minc2-hyper-test.c: In function 'test3': /build/libminc-2.4.05/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 814 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:815:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 815 | start[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ [ 82%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 82%] Linking C executable minc2-full-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -MF CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o.d -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.05/testdir/minc2-record-test.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 82%] Built target minc2-convert-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/testdir/minc2-label-test.c: In function 'create_label_image': /build/libminc-2.4.05/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 110 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 112 | coords[2] = k; | ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o" -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= /build/libminc-2.4.05/testdir/minc2-multires-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-multires-test.c:80:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 80 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-multires-test.c:81:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 81 | coords[2] = k; | ^ /build/libminc-2.4.05/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ [ 82%] Built target minc2-datatype-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 82%] Built target verify_xfm make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 83%] Linking C executable minc2-hyper-test-2 make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= /build/libminc-2.4.05/testdir/minc2-record-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-record-test.c:86:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 86 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-record-test.c:87:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 87 | coords[2] = k; | ^ /build/libminc-2.4.05/testdir/minc2-record-test.c:105:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 105 | coords[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-record-test.c:106:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 106 | coords[1] = j; | ^ /build/libminc-2.4.05/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 83%] Built target minc2-create-test-images make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o" -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend [ 83%] Built target minc2-create-test-images-2 make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend [ 83%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o [ 83%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -MF CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o.d -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.05/testdir/minc2-slice-test.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -MF CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o.d -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.05/testdir/minc2-valid-test.c [ 83%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -MF CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o.d -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 84%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 85%] Linking C executable minc2-grpattr-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -MF CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o.d -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.05/testdir/minc2-volprops-test.c cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build [ 85%] Linking C executable minc2-multires-test make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 [ 86%] Linking C executable minc2-record-test [ 86%] Built target minc2-large-attribute cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o" -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o" -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 86%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -MF CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o.d -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.05/testdir/minc2-read-rgb.c /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 131 | coords[3] = i; | ^ /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 166 | coords[0] = i; | ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o" -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc2-slice-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 29 | coords[0] = i; /*Z*/ | ^ /build/libminc-2.4.05/testdir/minc2-slice-test.c:30:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 30 | coords[1] = rand()%CX; /*X*/ | ^~~~ /build/libminc-2.4.05/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 31 | coords[2] = rand()%CY; /*Y*/ | ^~~~ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 86%] Built target multidim_test make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= [ 87%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 88%] Linking C executable minc2-label-test make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -MF CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o.d -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.05/testdir/minc2-read-metadata.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 [ 89%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -MF CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o.d -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.05/testdir/minc2-leak-test.c /build/libminc-2.4.05/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': /build/libminc-2.4.05/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 23 | return avg/length; | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c: In function 'calculate_mean_s': /build/libminc-2.4.05/testdir/minc2-read-rgb.c:33:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 33 | return avg/length; | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c: In function 'calculate_mean_d': /build/libminc-2.4.05/testdir/minc2-read-rgb.c:43:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 43 | return avg/length; | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-read-rgb.c:116:37: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 116 | dim= malloc(sizeof(midimhandle_t)*ndim); | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c:117:32: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 117 | sizes=malloc(sizeof(misize_t)*ndim); | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c:118:31: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 118 | origin=malloc(sizeof(double)*ndim); | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c:119:29: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 119 | step=malloc(sizeof(double)*ndim); | ^ /build/libminc-2.4.05/testdir/minc2-read-rgb.c:129:36: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 129 | r = miget_dimension_sizes ( dim, ndim, sizes ); | ^~~~ /build/libminc-2.4.05/testdir/minc2-read-rgb.c:134:53: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 134 | r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); | ^~~~ [ 90%] Linking C executable minc2-slice-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 [ 91%] Linking C executable minc2-valid-test /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o" -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o" -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 91%] Linking C executable minc2-vector_dimension-test /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o" -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 [ 91%] Linking C executable minc2-volprops-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o" -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o" -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 91%] Built target minc2-full-test make -f testdir/CMakeFiles/minc2-float-voxel-test.dir/build.make testdir/CMakeFiles/minc2-float-voxel-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-float-voxel-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-float-voxel-test.dir/build.make testdir/CMakeFiles/minc2-float-voxel-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 92%] Building C object testdir/CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o -MF CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o.d -o CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o -c /build/libminc-2.4.05/testdir/minc2-float-voxel-test.c [ 92%] Built target minc2-hyper-test-2 /build/libminc-2.4.05/testdir/minc2-leak-test.c: In function 'check_high_water_mark': /build/libminc-2.4.05/testdir/minc2-leak-test.c:36:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 36 | return usage.ru_maxrss; | ~~~~~^~~~~~~~~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': /build/libminc-2.4.05/testdir/minc2-leak-test.c:54:24: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 54 | if (cnt <= 0) return cnt; | ^~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c:58:21: warning: conversion to 'long unsigned int' from 'ssize_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 58 | objs = malloc(cnt * sizeof(hid_t)); | ^ /build/libminc-2.4.05/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'ssize_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); | ^~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c:60:13: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c:67:14: warning: conversion from 'ssize_t' {aka 'long int'} to 'herr_t' {aka 'int'} may change value [-Wconversion] 67 | status = H5Iget_name(anobj, name, 1024); | ^~~~~~~~~~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c: In function 'leak_loop': /build/libminc-2.4.05/testdir/minc2-leak-test.c:97:13: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 97 | int obj = H5Fget_obj_count(hvol->hdf_id, H5F_OBJ_ALL); | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c:113:40: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 113 | buffer = (double *) malloc( n_voxels * sizeof(double)); | ^ /build/libminc-2.4.05/testdir/minc2-leak-test.c:154:15: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 154 | new_obj = H5Fget_obj_count(hvol->hdf_id, H5F_OBJ_ALL); | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/testdir/minc2-leak-test.c: In function 'create_test_image': /build/libminc-2.4.05/testdir/minc2-leak-test.c:235:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); | ^ /build/libminc-2.4.05/testdir/minc2-leak-test.c:253:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 253 | start[0] = i; | ^ /build/libminc-2.4.05/testdir/minc2-leak-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); | ^~~~~ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 92%] Linking C executable minc2-read-metadata cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 [ 92%] Built target minc2-grpattr-test /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o" -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc2-float-voxel-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-float-voxel-test.c:144:9: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 144 | return(error_count); | ^ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 92%] Built target minc2-multires-test [ 92%] Linking C executable minc2-float-voxel-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-float-voxel-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 92%] Linking C executable minc2-leak-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o" -o minc2-float-voxel-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 93%] Linking C executable minc2-hyper-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 [ 93%] Built target minc2-label-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o" -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o" -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 93%] Built target minc2-record-test [ 93%] Built target minc2-slice-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 93%] Built target minc2-vector_dimension-test [ 93%] Built target minc2-volprops-test [ 93%] Built target minc2-valid-test [ 94%] Linking C executable minc2-read-rgb cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o" -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 94%] Built target minc2-read-metadata make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 94%] Built target minc2-float-voxel-test [ 94%] Built target minc2-hyper-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 94%] Built target minc2-read-rgb [ 94%] Built target minc2-leak-test [ 94%] Linking CXX shared library libminc_io.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.3.0 -o libminc_io.so.5.3.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.3.0 libminc_io.so.5.3.0 libminc_io.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 94%] Built target minc_io make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o [ 95%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o [ 95%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o [ 96%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -MF CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o.d -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp [ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o [ 97%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o -MF CMakeFiles/volume_avg.dir/volume_avg.cpp.o.d -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -MF CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o.d -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -MF CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o.d -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -MF CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o.d -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -MF CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o.d -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp In file included from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:15: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.05/ezminc/minc_1_simple.h:18, from /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:15: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); | ~~~~^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); | ~^~~~~~ /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:1: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:17: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:70:32: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]': /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:72:40: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:15: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:70:32: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]' /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:72:40: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:80:26: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 186 | _step[i]=0.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 187 | _start[i]=0.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:115:53: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 327 | size_t x=floor(_x); | ~~~~~^~~~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 328 | size_t y=floor(_y); | ~~~~~^~~~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] 329 | size_t z=floor(_z); | ~~~~~^~~~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 331 | float dx=_x-x; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 332 | float dy=_y-y; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 333 | float dz=_z-z; | ^ /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:17: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:119:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:119:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:11: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; vect = minc::fixed_vec<3, double>; idx = minc::fixed_vec<3, long unsigned int>]': /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:112:50: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:544:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:544:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:544:35: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'long unsigned int' to 'double' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ~~~^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:544:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:544:71: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 544 | ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:31:15: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:160:9: required from 'minc::simple_volume::simple_volume(size_t, size_t, size_t) [with T = minc::fixed_vec<3, float>; size_t = long unsigned int]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:103:45: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = fixed_vec<3, float>]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = fixed_vec<3, float>]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:124:23: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:7: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:97:34: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = fixed_vec<3, float>]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:124:23: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] 27 | vol(x,y,z)=x+y+z; | ~~~^~ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = fixed_vec<3, float>]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:124:23: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); | ~~~~~^~~ In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:19:26: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 186 | _step[i]=0.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 187 | _start[i]=0.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:3: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_non_standard_volume(minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:21:36: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:262:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:262:59: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:263:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 263 | strides[rw.map_space(dimorder[i])]=str; | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:264:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 264 | str*=rw.ndim(dimorder[i]); | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'size_t minc::simple_volume::dim(size_t) const [with T = float; size_t = long unsigned int]': /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:23:29: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:366:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 366 | return _size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_non_standard_volume(minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:32:36: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:286:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:286:60: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:287:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 287 | strides[rw.map_space(dimorder[i])]=str; | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:288:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 288 | str*=rw.ndim(dimorder[i]); | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:19: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:98:23: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 186 | _step[i]=0.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 187 | _start[i]=0.0; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]': /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:102:31: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:143:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 143 | _size[i]=a._size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:143:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 143 | _size[i]=a._size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume& minc::simple_volume::operator+=(const minc::simple_volume&) [with T = float]': /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:121:13: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:440:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 440 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:440:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 440 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume& minc::simple_volume::operator*=(const minc::simple_volume&) [with T = float]': /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:122:13: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:475:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 475 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:475:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 475 | if(_size[i]!=a._size[i]) | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:20:15: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:268:38: required from 'void minc::load_non_standard_volume(minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:21:36: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ In file included from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:18: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:100:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ In file included from /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:8: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = unsigned char]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:100:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:144:9: required from 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:102:31: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ~^~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:132:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:132:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 239 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:100:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:100:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = int]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] [ 98%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 99%] Linking CXX executable ezminc_rw_test2 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 99%] Built target volume_msq_dist [ 99%] Linking CXX executable create_grid_file cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 99%] Built target ezminc_rw_test2 [ 99%] Linking CXX executable trilinear_resample cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 99%] Built target create_grid_file [100%] Linking CXX executable volume_avg cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [100%] Built target trilinear_resample make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [100%] Built target volume_avg [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [100%] Built target ezminc_rw_test make[2]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.05/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/libminc-2.4.05' dh_auto_test --no-parallel cd obj-x86_64-linux-gnu && make -j1 test ARGS\+=--verbose ARGS\+=-j1 make[2]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j1 UpdateCTestConfiguration from :/build/libminc-2.4.05/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/libminc-2.4.05/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/libminc-2.4.05/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/libminc-2.4.05/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/libminc-2.4.05/obj-x86_64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: ezminc_rw_test 1: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests/ezminc_rw_test "/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests" 1: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests 1: Test timeout computed to be: 1500 1/53 Test #1: ezminc_rw_test ................... Passed 0.03 sec test 2 Start 2: minc_types-1 2: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_types" "/build/libminc-2.4.05/testdir/minc_types.out" 2: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 2: Test timeout computed to be: 1500 2/53 Test #2: minc_types-1 ..................... Passed 0.03 sec test 3 Start 3: minc_types-2 3: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_types" "/build/libminc-2.4.05/testdir/minc_types.out" 3: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 3: Test timeout computed to be: 1500 3/53 Test #3: minc_types-2 ..................... Passed 0.10 sec test 4 Start 4: icv_dim1-1 4: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim1" "/build/libminc-2.4.05/testdir/icv_dim1.out" 4: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 4: Test timeout computed to be: 1500 4/53 Test #4: icv_dim1-1 ....................... Passed 0.02 sec test 5 Start 5: icv_dim1-2 5: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim1" "/build/libminc-2.4.05/testdir/icv_dim1.out" 5: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 5: Test timeout computed to be: 1500 5/53 Test #5: icv_dim1-2 ....................... Passed 0.03 sec test 6 Start 6: icv_dim-1 6: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim" "/build/libminc-2.4.05/testdir/icv_dim.out" 6: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 6: Test timeout computed to be: 1500 6/53 Test #6: icv_dim-1 ........................ Passed 0.02 sec test 7 Start 7: icv_dim-2 7: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim" "/build/libminc-2.4.05/testdir/icv_dim.out" 7: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 7: Test timeout computed to be: 1500 7/53 Test #7: icv_dim-2 ........................ Passed 0.02 sec test 8 Start 8: icv_fillvalue-1 8: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_fillvalue" "/build/libminc-2.4.05/testdir/icv_fillvalue.out" 8: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 8: Test timeout computed to be: 1500 8/53 Test #8: icv_fillvalue-1 .................. Passed 0.02 sec test 9 Start 9: icv_fillvalue-2 9: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_fillvalue" "/build/libminc-2.4.05/testdir/icv_fillvalue.out" 9: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 9: Test timeout computed to be: 1500 9/53 Test #9: icv_fillvalue-2 .................. Passed 0.02 sec test 10 Start 10: icv_range-1 10: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_range" "/build/libminc-2.4.05/testdir/icv_range.out" 10: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 10: Test timeout computed to be: 1500 10/53 Test #10: icv_range-1 ...................... Passed 0.03 sec test 11 Start 11: icv_range-2 11: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_range" "/build/libminc-2.4.05/testdir/icv_range.out" 11: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 11: Test timeout computed to be: 1500 11/53 Test #11: icv_range-2 ...................... Passed 0.07 sec test 12 Start 12: arg_parse 12: Test command: /build/libminc-2.4.05/testdir/run_test_arg_parse_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_arg_parse" 12: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 12: Test timeout computed to be: 1500 12/53 Test #12: arg_parse ........................ Passed 0.35 sec test 13 Start 13: icv 13: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv 13: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 13: Test timeout computed to be: 1500 13: 111 113 115 117 119 13: 121 123 125 127 129 13: 131 133 135 137 139 13: 141 143 145 147 149 13: 211 213 215 217 219 13: 221 223 225 227 229 13: 231 233 235 237 239 13: 241 243 245 247 249 13: 311 313 315 317 319 13: 321 323 325 327 329 13: 331 333 335 337 339 13: 341 343 345 347 349 13/53 Test #13: icv .............................. Passed 0.02 sec test 14 Start 14: icv_vec 14: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_vec 14: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 14: Test timeout computed to be: 1500 14: Testing ICV with vector dimensions. 14: Testing with voxel type=3 14: Testing with voxel type=4 14: Testing with voxel type=5 14: Testing with voxel type=6 14: Exiting with error count 0 14/53 Test #14: icv_vec .......................... Passed 0.02 sec test 15 Start 15: minc 15: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_tst 15: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 15: Test timeout computed to be: 1500 15/53 Test #15: minc ............................. Passed 0.02 sec test 16 Start 16: mincapi 16: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/mincapi 16: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 16: Test timeout computed to be: 1500 16: Part 1... 16: ./libsrc/netcdf_convenience.c:619 (from micreate): Unable to create file '/tmp/minc-Pzhbhq' 16: Part 2... 16: Part 3... 16: Part 4... 16: ./libsrc/image_conversion.c:384 (from miicv_setint): Attempt to modify an attached image conversion variable 16: ./libsrc/image_conversion.c:1837 (from miicv_detach): Illegal ICV identifier 16: Part 5... 16: Part 7... 16: ./libsrc/image_conversion.c:1837 (from miicv_free): Illegal ICV identifier 16: ./libsrc/netcdf_convenience.c:686 (from miclose): Error closing file 16: ./libsrc/netcdf_convenience.c:686 (from miclose): Error closing file 16: ./libsrc/image_conversion.c:449 (from miicv_setint): Error setting ICV property: MI_ICV_NUM_IMGDIMS out of range 16: **** Tests completed with no errors 16/53 Test #16: mincapi .......................... Passed 0.08 sec test 17 Start 17: test_mconv 17: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_mconv 17: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 17: Test timeout computed to be: 1500 17/53 Test #17: test_mconv ....................... Passed 0.02 sec test 18 Start 18: minc_long_attr_10k 18: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_long_attr "10000" 18: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 18: Test timeout computed to be: 1500 18: Running test with attribute size=10000 18/53 Test #18: minc_long_attr_10k ............... Passed 0.07 sec test 19 Start 19: minc_long_attr_100k 19: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_long_attr "100000" 19: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 19: Test timeout computed to be: 1500 19: Running test with attribute size=100000 19/53 Test #19: minc_long_attr_100k .............. Passed 0.07 sec test 20 Start 20: minc_long_attr_1m 20: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_long_attr "1000000" 20: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 20: Test timeout computed to be: 1500 20: Running test with attribute size=1000000 20/53 Test #20: minc_long_attr_1m ................ Passed 0.08 sec test 21 Start 21: minc_conversion 21: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_conversion 21: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 21: Test timeout computed to be: 1500 21: test1 21: ./testdir/minc_conversion.c:67 21: ./testdir/minc_conversion.c:72 21: ./testdir/minc_conversion.c:75 21: ./testdir/minc_conversion.c:103 21: ./testdir/minc_conversion.c:111 21: ./testdir/minc_conversion.c:117 21: test2 21: test3 21: Reading full volume 20x30x40 float ... 21: No errors detected! 21/53 Test #21: minc_conversion .................. Passed 0.08 sec test 22 Start 22: volume_test-1 22: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/volume_test 22: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 22: Test timeout computed to be: 1500 22: set_multidim_n_dimensions: memory already allocated. 22: set_multidim_n_dimensions: memory already allocated. 22: OK 22/53 Test #22: volume_test-1 .................... Passed 1.72 sec test 23 Start 23: volume_multidim_test 23: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/multidim_test 23: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 23: Test timeout computed to be: 1500 23: Testing multidim_arrays... 23: test1()... OK 23: test2()... 12327429 values checked... OK 23: test3(2, 1, [13]) 23: Set 13 values... OK 23: test3(7, 1, [13]) 23: Set 13 values... OK 23: test3(1, 2, [13, 16]) 23: Set 208 values... OK 23: test3(6, 2, [13, 16]) 23: Set 208 values... OK 23: test3(4, 3, [13, 16, 17]) 23: Set 3536 values... OK 23: test3(3, 3, [13, 16, 17]) 23: Set 3536 values... OK 23: test3(3, 4, [13, 16, 17, 11]) 23: Set 38896 values... OK 23: test3(6, 4, [13, 16, 17, 11]) 23: Set 38896 values... OK 23: test3(5, 5, [13, 16, 17, 11, 23]) 23: Set 894608 values... OK 23: test3(8, 5, [13, 16, 17, 11, 23]) 23: Set 894608 values... OK 23: All tests completed without errors. 23/53 Test #23: volume_multidim_test ............. Passed 1.22 sec test 24 Start 24: test_xfm_1 24: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_xfm "10000" "/build/libminc-2.4.05/testdir/vio_xfm_test/t1.xfm" 24: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 24: Test timeout computed to be: 1500 24/53 Test #24: test_xfm_1 ....................... Passed 0.02 sec test 25 Start 25: test_xfm_2 25: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_xfm "10000" "/build/libminc-2.4.05/testdir/vio_xfm_test/t2.xfm" 25: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 25: Test timeout computed to be: 1500 25/53 Test #25: test_xfm_2 ....................... Passed 0.02 sec test 26 Start 26: test_xfm_3 26: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_xfm "10000" "/build/libminc-2.4.05/testdir/vio_xfm_test/t3.xfm" "0.9" 26: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 26: Test timeout computed to be: 1500 26: Setting tolerance to 0.900000. 26/53 Test #26: test_xfm_3 ....................... Passed 0.04 sec test 27 Start 27: copy_xfm 27: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/copy_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/t3.xfm" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/t3_copy.xfm" 27: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 27: Test timeout computed to be: 1500 27/53 Test #27: copy_xfm ......................... Passed 0.03 sec test 28 Start 28: verify_xfm_1 28: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/t3.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/random2" "1e-6" 28: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 28: Test timeout computed to be: 1500 28/53 Test #28: verify_xfm_1 ..................... Passed 0.03 sec test 29 Start 29: verify_xfm_float 29: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/test_float.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm_table.txt" "1e-9" 29: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 29: Test timeout computed to be: 1500 29/53 Test #29: verify_xfm_float ................. Passed 0.02 sec test 30 Start 30: verify_xfm_short 30: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/test_short.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm_table.txt" "1e-4" 30: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 30: Test timeout computed to be: 1500 30/53 Test #30: verify_xfm_short ................. Passed 0.02 sec test 31 Start 31: verify_xfm_byte 31: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/test_byte.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm_table.txt" "1e-1" 31: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 31: Test timeout computed to be: 1500 31/53 Test #31: verify_xfm_byte .................. Passed 0.03 sec test 32 Start 32: verify_xfm_2 32: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/t3_copy.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/random2" "1e-3" 32: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 32: Test timeout computed to be: 1500 32/53 Test #32: verify_xfm_2 ..................... Passed 0.02 sec test 33 Start 33: test_arg_parse 33: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_arg_parse 33: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 33: Test timeout computed to be: 1500 33: const_a:0 const_b:0 int_a:0 int_b:0 long_a:0 long_b:0 33/53 Test #33: test_arg_parse ................... Passed 0.02 sec test 34 Start 34: minc2-convert-test 34: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-convert-test 34: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 34: Test timeout computed to be: 1500 34: No errors 34/53 Test #34: minc2-convert-test ............... Passed 20.72 sec test 35 Start 35: minc2-create-test-images 35: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-create-test-images "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/2D_minc2.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/4D_minc2.mnc" 35: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 35: Test timeout computed to be: 1500 35: 35: No errors 35: Creating 2D image with IRREGULAR sample dimension!! 35: Creating 3D image with slice scaling!! 35: Creating 4D image with slice scaling!! 35/53 Test #35: minc2-create-test-images ......... Passed 0.08 sec test 36 Start 36: minc2-create-test-images-2 36: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-create-test-images-2 "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_int.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_float.mnc" 36: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 36: Test timeout computed to be: 1500 36: 36: No errors 36: Creating 3D image REAL stored as INT w/ slice scaling!! 36: Creating 3D image REAL stored as FLOAT w/ slice scaling!! 36/53 Test #36: minc2-create-test-images-2 ....... Passed 0.08 sec test 37 Start 37: minc2-large-attribute-10k 37: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-large-attribute "10000" 37: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 37: Test timeout computed to be: 1500 37: 37: No errors 37: Creating 3D image with attribute 10000 ! (3D_image_a.mnc) 37/53 Test #37: minc2-large-attribute-10k ........ Passed 0.03 sec test 38 Start 38: minc2-large-attribute-100k 38: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-large-attribute "100000" 38: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 38: Test timeout computed to be: 1500 38: 38: No errors 38: Creating 3D image with attribute 100000 ! (3D_image_a.mnc) 38/53 Test #38: minc2-large-attribute-100k ....... Passed 0.03 sec test 39 Start 39: minc2-large-attribute-1m 39: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-large-attribute "1000000" 39: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 39: Test timeout computed to be: 1500 39: 39: No errors 39: Creating 3D image with attribute 1000000 ! (3D_image_a.mnc) 39/53 Test #39: minc2-large-attribute-1m ......... Passed 0.03 sec test 40 Start 40: minc2-datatype-test 40: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-datatype-test "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/datatype_minc2.mnc" 40: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 40: Test timeout computed to be: 1500 40: file: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/datatype_minc2.mnc type 4 size 0 class 0 40/53 Test #40: minc2-datatype-test .............. Passed 1.89 sec test 41 Start 41: minc2-full-test 41: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-full-test 41: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 41: Test timeout computed to be: 1500 41: No errors 41/53 Test #41: minc2-full-test .................. Passed 1.63 sec test 42 Start 42: minc2-grpattr-test 42: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-grpattr-test 42: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 42: Test timeout computed to be: 1500 42: No errors 42: copy all attributes in the provided path in the new volume 42: ***************** 42/53 Test #42: minc2-grpattr-test ............... Passed 0.02 sec test 43 Start 43: minc2-hyper-test-2 43: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-hyper-test-2 43: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 43: Test timeout computed to be: 1500 43: 43: No errors 43: Creating image with slice scaling!! 43: Opening hyperslab-test2.mnc! 43: Sizes: 142, 245, 210 43: 43: Getting a real value hyperslab 43: Starting at 4, 3, 5 43: Extending to 120, 180, 110 43: 43: Test arbitrary location 70, 100, 104 43: Test from hyperslab: 6.210536 43: Test from voxel scaled: 6.210536 43: Test voxel value itself: 3622.000000 43: 43: HMMMMMMMMMM! let's try something else 43: 43: Test arbitrary location 104, 100, 70 43: Test from hyperslab: 9.663912 43: Test from voxel scaled: 9.663912 43: Test voxel value itself: 5371.000000 43/53 Test #43: minc2-hyper-test-2 ............... Passed 0.09 sec test 44 Start 44: minc2-hyper-test 44: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-hyper-test 44: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 44: Test timeout computed to be: 1500 44: miget_real_value_hyperslab() 44: miget_voxel_value_hyperslab, default dimensions 44: miget_voxel_value_hyperslab(), swapped dimensions 44: miget_voxel_hyperslab, reversed Z axis 44: Read 3x2x2 matrices of voxel values: 44: miget_hyperslab_normalized() 44: read and write entire hyperslab: 44: Read and verify hyperslab in original dimension order: 44: No errors 44: miget_real_value_hyperslab() 44: miget_voxel_value_hyperslab, default dimensions 44: miget_voxel_value_hyperslab(), swapped dimensions 44: miget_voxel_hyperslab, reversed Z axis 44: Read 3x2x2 matrices of voxel values: 44: miget_hyperslab_normalized() 44: miset_hyperslab_normalized() 44: miget_voxel_value_hyperslab() 44: No errors 44: Testing hyperslab operations with multi-resolution image. 44: No errors 44/53 Test #44: minc2-hyper-test ................. Passed 0.05 sec test 45 Start 45: minc2-label-test 45: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-label-test 45: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 45: Test timeout computed to be: 1500 45: ./libsrc2/label.c:120 (from MINC): HDF5 function H5Tenum_nameof failed 45: ./libsrc2/label.c:148 (from MINC): HDF5 function H5Tenum_valueof failed 45: No errors 45: Creating label image !! 45: 0 45: 6 45: Number of defined labels 6 45: Print label file with file order x,y,z 45: 0 ffffff 808080 ff0000 ff00 ff 45: 0 ffffff 808080 ff0000 ff00 ff 45: 0 ffffff 808080 ff0000 ff00 ff 45: 0 ffffff 808080 ff0000 ff00 ff 45: Print label file with apparent order z,y,x 45: 0 808080 ff00 808080 ff00 0 45: ff00 0 808080 0 808080 ff00 45: ffffff ff0000 ff ff0000 ff ffffff 45: ff ffffff ff0000 ffffff ff0000 ff 45/53 Test #45: minc2-label-test ................. Passed 0.03 sec test 46 Start 46: minc2-multires-test 46: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-multires-test 46: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 46: Test timeout computed to be: 1500 46: No errors 46: Creating volume... 46: Writing data... 46: Selecting half-size image 46: Selecting quarter-size image 46: Return to full resolution. 46: Flush any remaining thumbnails. 46/53 Test #46: minc2-multires-test .............. Passed 2.17 sec test 47 Start 47: minc2-record-test 47: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-record-test 47: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 47: Test timeout computed to be: 1500 47: No errors 47/53 Test #47: minc2-record-test ................ Passed 0.05 sec test 48 Start 48: minc2-slice-test 48: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-slice-test "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_int.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_float.mnc" 48: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 48: Test timeout computed to be: 1500 48: Checking /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2.mnc 48: Checking /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_int.mnc 48: Checking /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_float.mnc 48/53 Test #48: minc2-slice-test ................. Passed 0.03 sec test 49 Start 49: minc2-valid-test 49: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-valid-test "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/2D_minc2.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_int.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_float.mnc" "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/4D_minc2.mnc" 49: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 49: Test timeout computed to be: 1500 49: min -32768.000000 max 32767.000000 49: min 0.000000 max 65535.000000 49: min -2147483648.000000 max 2147483647.000000 49: min -340282346638528859811704183484516925440.000000 max 340282346638528859811704183484516925440.000000 49: min 0.000000 max 255.000000 49/53 Test #49: minc2-valid-test ................. Passed 0.03 sec test 50 Start 50: minc2-vector_dimension-test 50: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-vector_dimension-test 50: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 50: Test timeout computed to be: 1500 50: No errors 50: 50: Opening vector-dimension file! 50: 50: Total number of dimensions : 4 50: Dimension Size in file order : 41 410 530 3 50: Dim class RECORD present check dim name for *vector_dimension* 50: Let's get the first 10 data values of each vector component (file order) 50: FILE ORDER --> zspace, yspace, xspace, vector_dimension 50: Vector Componenet 1 50: 0 3 6 9 12 15 18 21 24 27 50: Vector Componenet 2 50: 1 4 7 10 13 16 19 22 25 28 50: Vector Componenet 3 50: 2 5 8 11 14 17 20 23 26 29 50: APPARENT ORDER --> vector_dimension, zspace, yspace, xspace 50: APPARENT ORDER SET 50: Vector Componenet 1 50: 0 3 6 9 12 15 18 21 24 27 50: Vector Componenet 2 50: 1 4 7 10 13 16 19 22 25 28 50: Vector Componenet 3 50: 2 5 8 11 14 17 20 23 26 29 50/53 Test #50: minc2-vector_dimension-test ...... Passed 0.97 sec test 51 Start 51: minc2-volprops-test 51: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-volprops-test 51: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 51: Test timeout computed to be: 1500 51: No errors 51: Multiresolution enabled: 1 depth: 2 51: Set compression type to 0 51: Got compression type 0 51: Set zlib level to 4 51: Got zlib level 4 51/53 Test #51: minc2-volprops-test .............. Passed 0.02 sec test 52 Start 52: minc2-leak-test 52: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-leak-test 52: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 52: Test timeout computed to be: 1500 52: Created test image 'minc2-leak-3129416.mnc' 52: Done. 52/53 Test #52: minc2-leak-test .................. Passed 24.20 sec test 53 Start 53: minc2-float-voxel-test 53: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-float-voxel-test "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test-dbl.mnc" 53: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 53: Test timeout computed to be: 1500 53/53 Test #53: minc2-float-voxel-test ........... Passed 0.03 sec 100% tests passed, 0 tests failed out of 53 Total Test time (real) = 56.60 sec make[2]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/libminc-2.4.05' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/libminc-2.4.05/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.05 -B/build/libminc-2.4.05/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/libminc2.so.5.3.0 -- Set runtime path of "/build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/libminc2.so.5.3.0" to "" -- Installing: /build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/libminc2.so -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc2.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc2_defs.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc2_structs.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc2_api.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc2_error.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_config.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_error.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/ParseArgv.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/read_file_names.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/restructure.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/time_stamp.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_common_defs.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/voxel_loop.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/nd_loop.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_compat.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_simple.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_format_convert.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/alloc.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/arrays.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/basic.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/def_math.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/files.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/geom_structs.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/geometry.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/multidim.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/progress.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/string_funcs.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/system_dependent.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/transforms.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/vol_io_prototypes.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/volume.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/volume_io/volume_cache.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/UseLIBMINC.cmake -- Installing: /build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/LIBMINCConfig.cmake -- Installing: /build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/libminc_io.so.5.3.0 -- Set runtime path of "/build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/libminc_io.so.5.3.0" to "" -- Installing: /build/libminc-2.4.05/debian/tmp/usr/lib/x86_64-linux-gnu/libminc_io.so -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_io_exceptions.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_io_fixed_vector.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_io_simple_volume.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_1_rw.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_1_simple.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_1_simple_rw.h -- Installing: /build/libminc-2.4.05/debian/tmp/usr/include/minc_io_4d_volume.h make[1]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dwz: debian/libminc2-5.3.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.3.0: DWARF compression not beneficial - old size 367181 new size 368320 dwz: debian/libminc2-5.3.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.3.0: DWARF compression not beneficial - old size 490258 new size 503853 dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libminc2-5.3.0' in '../libminc2-5.3.0_2.4.05-4_amd64.deb'. dpkg-deb: building package 'libminc2-5.3.0-dbgsym' in '../libminc2-5.3.0-dbgsym_2.4.05-4_amd64.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.05-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../libminc_2.4.05-4_amd64.buildinfo dpkg-genchanges --build=binary -O../libminc_2.4.05-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3106525 and its subdirectories I: Current time: Sat May 6 03:28:43 -12 2023 I: pbuilder-time-stamp: 1683386923