I: pbuilder: network access will be disabled during build I: Current time: Mon Apr 17 22:07:39 -12 2023 I: pbuilder-time-stamp: 1681812459 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libgpiv_0.6.1-7.1.dsc] I: copying [./libgpiv_0.6.1.orig.tar.gz] I: copying [./libgpiv_0.6.1-7.1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Jan 3 04:54:11 2021 -12 gpgv: using RSA key B8BF54137B09D35CF026FE9D091AB856069AAA1C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libgpiv_0.6.1-7.1.dsc: no acceptable signature found dpkg-source: info: extracting libgpiv in libgpiv-0.6.1 dpkg-source: info: unpacking libgpiv_0.6.1.orig.tar.gz dpkg-source: info: unpacking libgpiv_0.6.1-7.1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 03_lipng16.patch dpkg-source: info: applying 01_omp-pragma.diff dpkg-source: info: applying 02_hdf5.diff dpkg-source: info: applying 04-avoid-bool-keyword.diff dpkg-source: info: applying 05-doxygen_fixes.diff dpkg-source: info: applying 06-am-doxygen-fix.diff I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/983291/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='6701f4ccef2d4436ad545e8e861051b8' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='983291' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.z9t8Xzcd/pbuilderrc_cY5N --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.z9t8Xzcd/b1 --logfile b1/build.log libgpiv_0.6.1-7.1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Feb 12 08:05 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 00:40 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 22:02 more -rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount -rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Feb 12 08:05 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 04:31 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 22:02 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar -rwxr-xr-x 1 root root 14520 Nov 2 04:31 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/983291/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: autotools-dev, debhelper (>= 10), libfftw3-dev, libglib2.0-dev, libgomp1, libgsl-dev, libhdf5-dev (>= 1.8.8), libpng-dev, mpi-default-dev, netpbm, quilt (>= 0.40), dh-exec, autoconf-archive (>= 20160916-1), doxygen, autoconf-archive (>= 20160916-1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on autotools-dev; however: Package autotools-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 10); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev (>= 1.8.8); however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on netpbm; however: Package netpbm is not installed. pbuilder-satisfydepends-dummy depends on quilt (>= 0.40); however: Package quilt is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on autoconf-archive (>= 20160916-1); however: Package autoconf-archive is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on autoconf-archive (>= 20160916-1); however: Package autoconf-archive is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} autoconf-archive{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} diffstat{a} doxygen{a} dwz{a} ed{a} file{a} gettext{a} gettext-base{a} gfortran-12{a} groff-base{a} hdf5-helpers{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libblkid-dev{a} libbrotli1{a} libbsd0{a} libcbor0.8{a} libclang-cpp14{a} libclang1-14{a} libcurl4{a} libcurl4-openssl-dev{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1{a} libevent-2.1-7{a} libevent-core-2.1-7{a} libevent-dev{a} libevent-extra-2.1-7{a} libevent-openssl-2.1-7{a} libevent-pthreads-2.1-7{a} libexpat1{a} libfabric1{a} libffi-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libgsl-dev{a} libgsl27{a} libgslcblas0{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu72{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libldap-2.5-0{a} liblerc4{a} libllvm14{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmount-dev{a} libmunge2{a} libnetpbm11{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} librdmacm1{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libselinux1-dev{a} libsepol-dev{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtiff6{a} libtool{a} libuchardet0{a} libucx0{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-dev{a} netpbm{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.11{a} python3.11-minimal{a} quilt{a} readline-common{a} sensible-utils{a} uuid-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl ghostscript javascript-common less libarchive-cpio-perl libcoarrays-openmpi-dev libldap-common libmail-sendmail-perl libpng-tools libsasl2-modules lynx publicsuffix shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 168 newly installed, 0 to remove and 0 not upgraded. Need to get 130 MB of archives. After unpacking 570 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 autoconf-archive all 20220903-3 [775 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 11 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 12 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 libedit2 amd64 3.1-20221030-2 [93.0 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 libcbor0.8 amd64 0.8.0-2+b1 [27.4 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 libfido2-1 amd64 1.12.0-2+b1 [77.2 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 openssh-client amd64 1:9.2p1-2 [988 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 dh-exec amd64 0.27 [27.8 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libz3-4 amd64 4.8.12-3.1 [7216 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libllvm14 amd64 1:14.0.6-12 [21.8 MB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 libclang-cpp14 amd64 1:14.0.6-12 [11.1 MB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libclang1-14 amd64 1:14.0.6-12 [6157 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 doxygen amd64 1.9.4-4 [4611 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 ed amd64 1.19-1 [58.1 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libgfortran-12-dev amd64 12.2.0-14 [834 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 gfortran-12 amd64 12.2.0-14 [10.2 MB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 hdf5-helpers amd64 1.10.8+repack1-1 [27.9 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 libnl-3-200 amd64 3.7.0-0.2+b1 [63.1 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libnl-route-3-200 amd64 3.7.0-0.2+b1 [185 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 libibverbs1 amd64 44.0-2 [60.7 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 ibverbs-providers amd64 44.0-2 [335 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get: 66 http://deb.debian.org/debian bookworm/main amd64 libaec-dev amd64 1.0.6-1+b1 [19.9 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 uuid-dev amd64 2.38.1-5+b1 [39.9 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 libblkid-dev amd64 2.38.1-5+b1 [179 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-8 [386 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 libcurl4-openssl-dev amd64 7.88.1-8 [486 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 libevent-2.1-7 amd64 2.1.12-stable-8 [180 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-8 [131 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-8 [107 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-8 [53.6 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-8 [60.6 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 libevent-dev amd64 2.1.12-stable-8 [305 kB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.2 [168 kB] Get: 87 http://deb.debian.org/debian bookworm/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 librdmacm1 amd64 44.0-2 [68.6 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 libfabric1 amd64 1.17.0-3 [627 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 libffi-dev amd64 3.4.4-1 [59.4 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libfftw3-double3 amd64 3.3.10-1 [776 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libfftw3-long3 amd64 3.3.10-1 [337 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libfftw3-quad3 amd64 3.3.10-1 [603 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 libfftw3-single3 amd64 3.3.10-1 [806 kB] Get: 96 http://deb.debian.org/debian bookworm/main amd64 libfftw3-bin amd64 3.3.10-1 [51.7 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 libfftw3-dev amd64 3.3.10-1 [2123 kB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-data all 2.74.6-2 [1207 kB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-bin amd64 2.74.6-2 [110 kB] Get: 101 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 102 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-dev-bin amd64 2.74.6-2 [151 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 libsepol-dev amd64 3.4-2 [353 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libpcre2-16-0 amd64 10.42-1 [245 kB] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libpcre2-32-0 amd64 10.42-1 [234 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libpcre2-posix3 amd64 10.42-1 [55.4 kB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 libpcre2-dev amd64 10.42-1 [753 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 libselinux1-dev amd64 3.4-1+b5 [157 kB] Get: 110 http://deb.debian.org/debian bookworm/main amd64 libmount-dev amd64 2.38.1-5+b1 [22.5 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 pkgconf amd64 1.8.1-1 [25.9 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 pkg-config amd64 1.8.1-1 [13.7 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-dev amd64 2.74.6-2 [1601 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libgslcblas0 amd64 2.7.1+dfsg-3+b1 [116 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 libgsl27 amd64 2.7.1+dfsg-3+b1 [948 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libgsl-dev amd64 2.7.1+dfsg-3+b1 [1152 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get: 121 http://deb.debian.org/debian bookworm/main amd64 libhdf5-cpp-103-1 amd64 1.10.8+repack1-1 [128 kB] Get: 122 http://deb.debian.org/debian bookworm/main amd64 libhdf5-fortran-102 amd64 1.10.8+repack1-1 [93.3 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-fortran-100 amd64 1.10.8+repack1-1 [44.5 kB] Get: 125 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-cpp-100 amd64 1.10.8+repack1-1 [25.5 kB] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 127 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2 [290 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 libjpeg-dev amd64 1:2.1.5-2 [71.8 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 libssl-dev amd64 3.0.8-1 [2427 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 libhdf5-dev amd64 1.10.8+repack1-1 [2615 kB] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libhwloc15 amd64 2.9.0-1 [154 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libnuma-dev amd64 2.0.16-1 [35.0 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 libltdl7 amd64 2.4.7-5 [393 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 libltdl-dev amd64 2.4.7-5 [164 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 libhwloc-dev amd64 2.9.0-1 [241 kB] Get: 136 http://deb.debian.org/debian bookworm/main amd64 libpciaccess0 amd64 0.17-2 [51.4 kB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 139 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 140 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 142 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 143 http://deb.debian.org/debian bookworm/main amd64 libxnvctrl0 amd64 525.85.05-1 [13.3 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 ocl-icd-libopencl1 amd64 2.3.1-1 [43.0 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 libhwloc-plugins amd64 2.9.0-1 [17.5 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 libnl-3-dev amd64 3.7.0-0.2+b1 [104 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 libnl-route-3-dev amd64 3.7.0-0.2+b1 [203 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 libibverbs-dev amd64 44.0-2 [633 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 151 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 152 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 libmunge2 amd64 0.5.15-2 [19.5 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 libnetpbm11 amd64 2:11.01.00-2 [174 kB] Get: 155 http://deb.debian.org/debian bookworm/main amd64 libpmix2 amd64 4.2.2-1+b1 [622 kB] Get: 156 http://deb.debian.org/debian bookworm/main amd64 libucx0 amd64 1.13.1-1 [860 kB] Get: 157 http://deb.debian.org/debian bookworm/main amd64 libopenmpi3 amd64 4.1.4-3+b1 [2422 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 openmpi-common all 4.1.4-3 [167 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 libpmix-dev amd64 4.2.2-1+b1 [902 kB] Get: 160 http://deb.debian.org/debian bookworm/main amd64 openmpi-bin amd64 4.1.4-3+b1 [226 kB] Get: 161 http://deb.debian.org/debian bookworm/main amd64 libopenmpi-dev amd64 4.1.4-3+b1 [970 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 163 http://deb.debian.org/debian bookworm/main amd64 libpng-dev amd64 1.6.39-2 [359 kB] Get: 164 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.1 [285 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-5 [316 kB] Get: 166 http://deb.debian.org/debian bookworm/main amd64 mpi-default-dev amd64 1.14 [5548 B] Get: 167 http://deb.debian.org/debian bookworm/main amd64 netpbm amd64 2:11.01.00-2 [2015 kB] Get: 168 http://deb.debian.org/debian bookworm/main amd64 quilt all 0.67+really0.66-1 [303 kB] Fetched 130 MB in 2s (67.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package autoconf-archive. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../autoconf-archive_20220903-3_all.deb ... Unpacking autoconf-archive (20220903-3) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../libpython3.11-minimal_3.11.2-6_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.2-6) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_amd64.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:amd64 (3.11.2-6) ... Setting up libexpat1:amd64 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21094 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_amd64.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../3-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_amd64.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21528 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.2-1+b1_amd64.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../006-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.22.4-10_amd64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.38.1-5+b1_amd64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../009-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.11.2-2_amd64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../011-libbsd0_0.11.7-2_amd64.deb ... Unpacking libbsd0:amd64 (0.11.7-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../012-libedit2_3.1-20221030-2_amd64.deb ... Unpacking libedit2:amd64 (3.1-20221030-2) ... Selecting previously unselected package libcbor0.8:amd64. Preparing to unpack .../013-libcbor0.8_0.8.0-2+b1_amd64.deb ... Unpacking libcbor0.8:amd64 (0.8.0-2+b1) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../014-libfido2-1_1.12.0-2+b1_amd64.deb ... Unpacking libfido2-1:amd64 (1.12.0-2+b1) ... 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Setting up libglib2.0-0:amd64 (2.74.6-2) ... No schema files found: doing nothing. Setting up libcbor0.8:amd64 (0.8.0-2+b1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libnghttp2-14:amd64 (1.52.0-1) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up libnetpbm11:amd64 (2:11.01.00-2) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up libfftw3-long3:amd64 (3.3.10-1) ... Setting up gettext-base (0.21-12) ... Setting up libgsl27:amd64 (2.7.1+dfsg-3+b1) ... Setting up m4 (1.4.19-3) ... Setting up autoconf-archive (20220903-3) ... Setting up file (1:5.44-3) ... Setting up libffi-dev:amd64 (3.4.4-1) ... Setting up libjbig0:amd64 (2.1-6.1) ... Setting up libpcre2-16-0:amd64 (10.42-1) ... Setting up libaec0:amd64 (1.0.6-1+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1) ... Setting up libpcre2-32-0:amd64 (10.42-1) ... Setting up libglib2.0-data (2.74.6-2) ... Setting up libpkgconf3:amd64 (1.8.1-1) ... Setting up libmunge2 (0.5.15-2) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-2) ... Setting up ed (1.19-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up uuid-dev:amd64 (2.38.1-5+b1) ... Setting up libfftw3-quad3:amd64 (3.3.10-1) ... Setting up diffstat (1.65-1) ... Setting up libssl-dev:amd64 (3.0.8-1) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libhwloc15:amd64 (2.9.0-1) ... Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libevent-2.1-7:amd64 (2.1.12-stable-8) ... Setting up autopoint (0.21-12) ... Setting up libsepol-dev:amd64 (3.4-2) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up libltdl7:amd64 (2.4.7-5) ... Setting up libfftw3-double3:amd64 (3.3.10-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:amd64 (1.2.4-0.1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up libnuma1:amd64 (2.0.16-1) ... Setting up libpcre2-posix3:amd64 (10.42-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.1-1) ... Setting up libtiff6:amd64 (4.5.0-5) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libnl-3-200:amd64 (3.7.0-0.2+b1) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up openmpi-common (4.1.4-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.2) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:amd64 (1.12.0-2+b1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b3) ... Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libblkid-dev:amd64 (2.38.1-5+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up libgsl-dev (2.7.1+dfsg-3+b1) ... Setting up libpcre2-dev:amd64 (10.42-1) ... Setting up libtool (2.4.7-5) ... Setting up libfftw3-bin (3.3.10-1) ... Setting up libselinux1-dev:amd64 (3.4-1+b5) ... Setting up libedit2:amd64 (3.1-20221030-2) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libpng-dev:amd64 (1.6.39-2) ... Setting up libaec-dev:amd64 (1.0.6-1+b1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-2) ... Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libglib2.0-bin (2.74.6-2) ... Setting up quilt (0.67+really0.66-1) ... Setting up libgfortran-12-dev:amd64 (12.2.0-14) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up pkgconf:amd64 (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.16-1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.2+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-5) ... Setting up gfortran-12 (12.2.0-14) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libevent-dev (2.1.12-stable-8) ... Setting up pkg-config:amd64 (1.8.1-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libllvm14:amd64 (1:14.0.6-12) ... Setting up dwz (0.15-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.2+b1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:amd64 (7.88.1-8) ... Setting up libx11-6:amd64 (2:1.8.4-2) ... Setting up libhwloc-dev:amd64 (2.9.0-1) ... Setting up libfftw3-dev:amd64 (3.3.10-1) ... Setting up libmount-dev:amd64 (2.38.1-5+b1) ... Setting up libibverbs1:amd64 (44.0-2) ... Setting up ibverbs-providers:amd64 (44.0-2) ... Setting up openssh-client (1:9.2p1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libclang1-14 (1:14.0.6-12) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxnvctrl0:amd64 (525.85.05-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.2+b1) ... Setting up libcurl4-openssl-dev:amd64 (7.88.1-8) ... Setting up libclang-cpp14 (1:14.0.6-12) ... Setting up netpbm (2:11.01.00-2) ... Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up libhdf5-cpp-103-1:amd64 (1.10.8+repack1-1) ... Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up librdmacm1:amd64 (44.0-2) ... Setting up python3.11 (3.11.2-6) ... Setting up libucx0:amd64 (1.13.1-1) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up dh-exec (0.27) ... Setting up libibverbs-dev:amd64 (44.0-2) ... Setting up libhwloc-plugins:amd64 (2.9.0-1) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.8+repack1-1) ... Setting up doxygen (1.9.4-4) ... Setting up libhdf5-fortran-102:amd64 (1.10.8+repack1-1) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.8+repack1-1) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-distutils (3.11.2-2) ... Setting up libfabric1:amd64 (1.17.0-3) ... Setting up libglib2.0-dev-bin (2.74.6-2) ... Setting up libpmix2:amd64 (4.2.2-1+b1) ... Setting up libopenmpi3:amd64 (4.1.4-3+b1) ... Setting up libglib2.0-dev:amd64 (2.74.6-2) ... Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libpmix-dev:amd64 (4.2.2-1+b1) ... Setting up openmpi-bin (4.1.4-3+b1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:amd64 (4.1.4-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.14) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libgpiv-0.6.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libgpiv_0.6.1-7.1_source.changes dpkg-buildpackage: info: source package libgpiv dpkg-buildpackage: info: source version 0.6.1-7.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Holger Levsen dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --builddirectory=build-doc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_clean override_dh_auto_clean rm -rf /build/libgpiv-0.6.1/debian/tmp-mpi make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_autoreconf_clean -O--builddirectory=build-doc dh_clean -O--builddirectory=build-doc dh clean --builddirectory=build-serial debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_clean override_dh_auto_clean rm -rf /build/libgpiv-0.6.1/debian/tmp-mpi make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_autoreconf_clean -O--builddirectory=build-serial dh_clean -O--builddirectory=build-serial dh clean --builddirectory=build-mpi debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_clean override_dh_auto_clean rm -rf /build/libgpiv-0.6.1/debian/tmp-mpi make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_autoreconf_clean -O--builddirectory=build-mpi dh_clean -O--builddirectory=build-mpi debian/rules build dh build --builddirectory=build-doc dh_update_autotools_config -O--builddirectory=build-doc dh_autoreconf -O--builddirectory=build-doc autoreconf: warning: autoconf input should be named 'configure.ac', not 'configure.in' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.in, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:2: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.in:2: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10914: AM_CONFIG_HEADER is expanded from... configure.in:2: the top level configure.in:36: warning: The macro `AC_ISC_POSIX' is obsolete. configure.in:36: You should run autoupdate. ./lib/autoconf/specific.m4:550: AC_ISC_POSIX is expanded from... configure.in:36: the top level configure.in:39: warning: 'AM_PROG_CC_STDC': this macro is obsolete. configure.in:39: You should simply use the 'AC_PROG_CC' macro instead. configure.in:39: Also, your code should no longer depend upon 'am_cv_prog_cc_stdc', configure.in:39: but upon 'ac_cv_prog_cc_stdc'. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10920: AM_PROG_CC_STDC is expanded from... configure.in:39: the top level configure.in:42: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.in:42: You should run autoupdate. aclocal.m4:859: AC_PROG_LIBTOOL is expanded from... configure.in:42: the top level configure.in:45: warning: The macro `AC_HEADER_STDC' is obsolete. configure.in:45: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.in:45: the top level configure.in:98: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10598: AM_INIT_AUTOMAKE is expanded from... configure.in:98: the top level configure.in:197: warning: The macro `ACX_MPI' is obsolete. configure.in:197: You should run autoupdate. aclocal.m4:90: ACX_MPI is expanded from... configure.in:197: the top level configure.in:197: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.in:197: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... aclocal.m4:91: AX_MPI is expanded from... aclocal.m4:90: ACX_MPI is expanded from... configure.in:197: the top level configure.in:248: warning: AC_OUTPUT should be used without arguments. configure.in:248: You should run autoupdate. autoheader: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:98: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:98: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:36: installing './compile' configure.in:98: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' lib/Makefile.am:33: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-serial -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-serial && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== dh_auto_configure --builddirectory=build-mpi -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi cd build-mpi && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes configure: WARNING: "libmpi HAS BEEN installed" checking for main in -lmpi... yes checking for mpi.h... yes checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Message Passing Interface (MPI) for processing on distributed memory systems building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-doc -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-doc && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... 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(cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_build --builddirectory=build-serial cd build-serial && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genpar.lo ../../lib/genpar.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 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--mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img_utils.lo ../../lib/img_utils.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc.lo ../../lib/imgproc.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_deform.lo ../../lib/imgproc_deform.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_par.lo ../../lib/imgproc_par.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 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--mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_hdf.lo ../../lib/io_hdf.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_dav.lo ../../lib/io_dav.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -fPIC -DPIC -o .libs/trig_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -fPIC -DPIC -o .libs/img_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -fPIC -DPIC -o .libs/io_png.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -fPIC -DPIC -o .libs/trig.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -fPIC -DPIC -o .libs/imgproc_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -fPIC -DPIC -o .libs/io.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -fPIC -DPIC -o .libs/imgproc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -fPIC -DPIC -o .libs/img.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -fPIC -DPIC -o .libs/io_hdf.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -fPIC -DPIC -o .libs/genpar.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -fPIC -DPIC -o .libs/imgproc_deform.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -o trig_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -fPIC -DPIC -o .libs/cam.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -fPIC -DPIC -o .libs/io_raw.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -fPIC -DPIC -o .libs/io_dav.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -o trig.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -fPIC -DPIC -o .libs/cam_par.o /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo ../../lib/utils.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -o cam.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -o cam_par.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils_alloc.lo ../../lib/utils_alloc.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv.lo ../../lib/piv.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_par.lo ../../lib/piv_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -fPIC -DPIC -o .libs/utils_alloc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -fPIC -DPIC -o .libs/utils.o ../../lib/io.c: In function 'gpiv_find_pivdata_origin': ../../lib/io.c:379:28: warning: comparison between pointer and zero character constant [-Wpointer-compare] 379 | if (strstr(line, "rr") != '\0') { | ^~ ../../lib/io.c:379:9: note: did you mean to dereference the pointer? 379 | if (strstr(line, "rr") != '\0') { | ^ ../../lib/io.c:381:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 381 | } else if (strstr(line, "DaVis") != '\0') { | ^~ ../../lib/io.c:381:16: note: did you mean to dereference the pointer? 381 | } else if (strstr(line, "DaVis") != '\0') { | ^ ../../lib/io.c: In function 'find_data_scaled': ../../lib/io.c:1201:30: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1201 | if (strstr(line,"scale") != '\0') { | ^~ ../../lib/io.c:1201:9: note: did you mean to dereference the pointer? 1201 | if (strstr(line,"scale") != '\0') { | ^ ../../lib/io.c: In function 'count_asciidata': ../../lib/io.c:1243:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 1243 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/io.c:1243:28: warning: comparison between pointer and integer 1243 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'read_pivdata_from_stdin': ../../lib/io.c:1579:27: warning: comparison between pointer and integer 1579 | while (gets (line[k]) != NULL) { | ^~ ../../lib/io.c: In function 'read_scdata_from_stdin': ../../lib/io.c:1671:27: warning: comparison between pointer and integer 1671 | while (gets (line[k]) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -fPIC -DPIC -o .libs/piv.o ../../lib/img.c: In function 'gpiv_img_read_header': ../../lib/img.c:939:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 939 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/img.c:939:28: warning: comparison between pointer and integer 939 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -o io_dav.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -fPIC -DPIC -o .libs/piv_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -o img_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -o imgproc_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -o genpar.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -o io_raw.o >/dev/null 2>&1 ../../lib/utils.c: In function 'gpiv_add_datetime_to_comment': ../../lib/utils.c:232:5: warning: 'g_date_set_time' is deprecated: Use 'g_date_set_time_t' instead [-Wdeprecated-declarations] 232 | g_date_set_time(gdate, time (NULL)); | ^~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:45, from ../../include/gpiv.h:202, from ../../lib/utils.c:51: /usr/include/glib-2.0/glib/gdate.h:205:14: note: declared here 205 | void g_date_set_time (GDate *date, | ^~~~~~~~~~~~~~~ ../../lib/utils.c:234:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_day" 234 | g_date_day (gdate), | ^ ~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:235:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_month" 235 | g_date_month (gdate), | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:236:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_year" 236 | g_date_year (gdate)); | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:247:36: warning: too many arguments for format [-Wformat-extra-args] 247 | comment = g_strdup_printf ("%s%s", cdate, ctime, NULL); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_iph': ../../lib/utils.c:708:9: warning: writing into constant object (argument 3) [-Wformat=] 708 | sscanf (line, "%s %d", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_cph': ../../lib/utils.c:748:9: warning: writing into constant object (argument 3) [-Wformat=] 748 | sscanf (line, "%s %c", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_fph': ../../lib/utils.c:789:9: warning: writing into constant object (argument 3) [-Wformat=] 789 | sscanf (line, "%s %f", par_name, parameter); | ^~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -o io_png.o >/dev/null 2>&1 ../../lib/piv_par.c: In function 'gpiv_piv_read_parameters': ../../lib/piv_par.c:279:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 279 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/piv_par.c:279:28: warning: comparison between pointer and integer 279 | while (gets (line) != NULL) { | ^~ /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_utils.lo ../../lib/piv_utils.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -o imgproc_deform.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -o imgproc.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -o utils_alloc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid.lo ../../lib/valid.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -o utils.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid_par.lo ../../lib/valid_par.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post.lo ../../lib/post.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -fPIC -DPIC -o .libs/piv_utils.o /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_par.lo ../../lib/post_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -fPIC -DPIC -o .libs/valid_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -o io_hdf.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -fPIC -DPIC -o .libs/valid.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -fPIC -DPIC -o .libs/post.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -fPIC -DPIC -o .libs/post_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -o io.o >/dev/null 2>&1 ../../lib/valid_par.c: In function 'gpiv_valid_read_parameters': ../../lib/valid_par.c:184:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 184 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/valid_par.c:184:28: warning: comparison between pointer and integer 184 | while (gets (line) != NULL) { | ^~ ../../lib/post_par.c: In function 'gpiv_post_read_parameters': ../../lib/post_par.c:295:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 295 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/post_par.c:295:28: warning: comparison between pointer and integer 295 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -o img.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_utils.lo ../../lib/post_utils.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o my_utils.lo ../../lib/my_utils.c ../../lib/piv_utils.c: In function 'gpiv_piv_gnuplot': ../../lib/piv_utils.c:581:47: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 581 | "gnuplot -bg %s -geometry %dx%d %s", | ^~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, 583 | fname_cmd); | ~~~~~~~~~ ../../lib/piv_utils.c:580:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 580 | snprintf (command, GPIV_MAX_CHARS, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 | "gnuplot -bg %s -geometry %dx%d %s", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 | fname_cmd); | ~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -fPIC -DPIC -o .libs/post_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -fPIC -DPIC -o .libs/my_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -o piv_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -o valid_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -o piv_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -o post_par.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_scalar_gnuplot': ../../lib/post_utils.c:192:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:192:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../lib/my_utils.c: In function 'my_utils_fopen_tmp': ../../lib/my_utils.c:55:27: warning: implicit declaration of function 'g_mkdir'; did you mean 'rmdir'? [-Wimplicit-function-declaration] 55 | if ((return_val = g_mkdir(tmp_user_dir, 700)) != 0) { | ^~~~~~~ | rmdir libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -o my_utils.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_histo_gnuplot': ../../lib/post_utils.c:539:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:539:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -o valid.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -o post_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -o post.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -o piv.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link x86_64-linux-gnu-gcc -fopenmp -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libgpiv.la -rpath /usr/lib/x86_64-linux-gnu genpar.lo cam.lo cam_par.lo trig.lo trig_par.lo img.lo img_utils.lo imgproc.lo imgproc_deform.lo imgproc_par.lo io.lo io_png.lo io_raw.lo io_hdf.lo io_dav.lo utils.lo utils_alloc.lo piv.lo piv_par.lo piv_utils.lo valid.lo valid_par.lo post.lo post_par.lo post_utils.lo my_utils.lo -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 libtool: link: x86_64-linux-gnu-gcc -shared -fPIC -DPIC .libs/genpar.o .libs/cam.o .libs/cam_par.o .libs/trig.o .libs/trig_par.o .libs/img.o .libs/img_utils.o .libs/imgproc.o .libs/imgproc_deform.o .libs/imgproc_par.o .libs/io.o .libs/io_png.o .libs/io_raw.o .libs/io_hdf.o .libs/io_dav.o .libs/utils.o .libs/utils_alloc.o .libs/piv.o .libs/piv_par.o .libs/piv_utils.o .libs/valid.o .libs/valid_par.o .libs/post.o .libs/post_par.o .libs/post_utils.o .libs/my_utils.o -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 -fopenmp -g -O2 -fstack-protector-strong -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -fopenmp -Wl,-soname -Wl,libgpiv.so.3 -o .libs/libgpiv.so.3.0.0 /usr/bin/ld: .libs/img.o: in function `gpiv_img_read_header': ./build-serial/lib/../../lib/img.c:939: warning: the `gets' function is dangerous and should not be used. libtool: link: (cd ".libs" && rm -f "libgpiv.so.3" && ln -s "libgpiv.so.3.0.0" "libgpiv.so.3") libtool: link: (cd ".libs" && rm -f "libgpiv.so" && ln -s "libgpiv.so.3.0.0" "libgpiv.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libgpiv.a genpar.o cam.o cam_par.o trig.o trig_par.o img.o img_utils.o imgproc.o imgproc_deform.o imgproc_par.o io.o io_png.o io_raw.o io_hdf.o io_dav.o utils.o utils_alloc.o piv.o piv_par.o piv_utils.o valid.o valid_par.o post.o post_par.o post_utils.o my_utils.o libtool: link: x86_64-linux-gnu-ranlib .libs/libgpiv.a libtool: link: ( cd ".libs" && rm -f "libgpiv.la" && ln -s "../libgpiv.la" "libgpiv.la" ) make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_build --builddirectory=build-mpi cd build-mpi && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genpar.lo ../../lib/genpar.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam.lo ../../lib/cam.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam_par.lo ../../lib/cam_par.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig.lo ../../lib/trig.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig_par.lo ../../lib/trig_par.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img.lo ../../lib/img.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img_utils.lo ../../lib/img_utils.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc.lo ../../lib/imgproc.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_deform.lo ../../lib/imgproc_deform.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_par.lo ../../lib/imgproc_par.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io.lo ../../lib/io.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_png.lo ../../lib/io_png.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_raw.lo ../../lib/io_raw.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_hdf.lo ../../lib/io_hdf.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_dav.lo ../../lib/io_dav.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -fPIC -DPIC -o .libs/imgproc_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -fPIC -DPIC -o .libs/img_utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -fPIC -DPIC -o .libs/io_png.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -fPIC -DPIC -o .libs/imgproc_deform.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -fPIC -DPIC -o .libs/io_hdf.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -fPIC -DPIC -o .libs/io_raw.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -fPIC -DPIC -o .libs/genpar.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -fPIC -DPIC -o .libs/trig_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -fPIC -DPIC -o .libs/imgproc.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -fPIC -DPIC -o .libs/cam_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -fPIC -DPIC -o .libs/img.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -fPIC -DPIC -o .libs/cam.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -fPIC -DPIC -o .libs/trig.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -fPIC -DPIC -o .libs/io.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -o trig_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -o cam.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -o cam_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -fPIC -DPIC -o .libs/io_dav.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -o trig.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo ../../lib/utils.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils_alloc.lo ../../lib/utils_alloc.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv.lo ../../lib/piv.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_par.lo ../../lib/piv_par.c ../../lib/img.c: In function 'gpiv_img_read_header': ../../lib/img.c:939:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 939 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/img.c:939:28: warning: comparison between pointer and integer 939 | while (gets (line) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -o img_utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -o imgproc_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -o genpar.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -o io_raw.o >/dev/null 2>&1 ../../lib/io.c: In function 'gpiv_find_pivdata_origin': ../../lib/io.c:379:28: warning: comparison between pointer and zero character constant [-Wpointer-compare] 379 | if (strstr(line, "rr") != '\0') { | ^~ ../../lib/io.c:379:9: note: did you mean to dereference the pointer? 379 | if (strstr(line, "rr") != '\0') { | ^ ../../lib/io.c:381:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 381 | } else if (strstr(line, "DaVis") != '\0') { | ^~ ../../lib/io.c:381:16: note: did you mean to dereference the pointer? 381 | } else if (strstr(line, "DaVis") != '\0') { | ^ ../../lib/io.c: In function 'find_data_scaled': ../../lib/io.c:1201:30: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1201 | if (strstr(line,"scale") != '\0') { | ^~ ../../lib/io.c:1201:9: note: did you mean to dereference the pointer? 1201 | if (strstr(line,"scale") != '\0') { | ^ ../../lib/io.c: In function 'count_asciidata': ../../lib/io.c:1243:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 1243 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/io.c:1243:28: warning: comparison between pointer and integer 1243 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'read_pivdata_from_stdin': ../../lib/io.c:1579:27: warning: comparison between pointer and integer 1579 | while (gets (line[k]) != NULL) { | ^~ ../../lib/io.c: In function 'read_scdata_from_stdin': ../../lib/io.c:1671:27: warning: comparison between pointer and integer 1671 | while (gets (line[k]) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -o io_dav.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -fPIC -DPIC -o .libs/utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -fPIC -DPIC -o .libs/utils_alloc.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -fPIC -DPIC -o .libs/piv.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -fPIC -DPIC -o .libs/piv_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -o io_png.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -o imgproc_deform.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_utils.lo ../../lib/piv_utils.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid.lo ../../lib/valid.c ../../lib/utils.c: In function 'gpiv_add_datetime_to_comment': ../../lib/utils.c:232:5: warning: 'g_date_set_time' is deprecated: Use 'g_date_set_time_t' instead [-Wdeprecated-declarations] 232 | g_date_set_time(gdate, time (NULL)); | ^~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:45, from ../../include/gpiv.h:202, from ../../lib/utils.c:51: /usr/include/glib-2.0/glib/gdate.h:205:14: note: declared here 205 | void g_date_set_time (GDate *date, | ^~~~~~~~~~~~~~~ ../../lib/utils.c:234:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_day" 234 | g_date_day (gdate), | ^ ~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:235:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_month" 235 | g_date_month (gdate), | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:236:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_year" 236 | g_date_year (gdate)); | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:247:36: warning: too many arguments for format [-Wformat-extra-args] 247 | comment = g_strdup_printf ("%s%s", cdate, ctime, NULL); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_iph': ../../lib/utils.c:708:9: warning: writing into constant object (argument 3) [-Wformat=] 708 | sscanf (line, "%s %d", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_cph': ../../lib/utils.c:748:9: warning: writing into constant object (argument 3) [-Wformat=] 748 | sscanf (line, "%s %c", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_fph': ../../lib/utils.c:789:9: warning: writing into constant object (argument 3) [-Wformat=] 789 | sscanf (line, "%s %f", par_name, parameter); | ^~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -o io_hdf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid_par.lo ../../lib/valid_par.c libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -o imgproc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post.lo ../../lib/post.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_par.lo ../../lib/post_par.c ../../lib/piv_par.c: In function 'gpiv_piv_read_parameters': ../../lib/piv_par.c:279:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 279 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/piv_par.c:279:28: warning: comparison between pointer and integer 279 | while (gets (line) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -fPIC -DPIC -o .libs/piv_utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -o utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -o io.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -fPIC -DPIC -o .libs/valid.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -o utils_alloc.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -o img.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -fPIC -DPIC -o .libs/valid_par.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -fPIC -DPIC -o .libs/post.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -fPIC -DPIC -o .libs/post_par.o /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_utils.lo ../../lib/post_utils.c /bin/bash ../libtool --tag=CC --mode=compile mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o my_utils.lo ../../lib/my_utils.c ../../lib/valid_par.c: In function 'gpiv_valid_read_parameters': ../../lib/valid_par.c:184:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 184 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/valid_par.c:184:28: warning: comparison between pointer and integer 184 | while (gets (line) != NULL) { | ^~ ../../lib/piv_utils.c: In function 'gpiv_piv_gnuplot': ../../lib/piv_utils.c:581:47: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 581 | "gnuplot -bg %s -geometry %dx%d %s", | ^~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, 583 | fname_cmd); | ~~~~~~~~~ ../../lib/piv_utils.c:580:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 580 | snprintf (command, GPIV_MAX_CHARS, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 | "gnuplot -bg %s -geometry %dx%d %s", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 | fname_cmd); | ~~~~~~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -fPIC -DPIC -o .libs/post_utils.o ../../lib/post_par.c: In function 'gpiv_post_read_parameters': ../../lib/post_par.c:295:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 295 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/post_par.c:295:28: warning: comparison between pointer and integer 295 | while (gets (line) != NULL) { | ^~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -fPIC -DPIC -o .libs/my_utils.o libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -o valid_par.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -o piv_utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -o piv_par.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_scalar_gnuplot': ../../lib/post_utils.c:192:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:192:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -o post_par.o >/dev/null 2>&1 ../../lib/my_utils.c: In function 'my_utils_fopen_tmp': ../../lib/my_utils.c:55:27: warning: implicit declaration of function 'g_mkdir'; did you mean 'rmdir'? [-Wimplicit-function-declaration] 55 | if ((return_val = g_mkdir(tmp_user_dir, 700)) != 0) { | ^~~~~~~ | rmdir ../../lib/post_utils.c: In function 'gpiv_histo_gnuplot': ../../lib/post_utils.c:539:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:539:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -o my_utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -o post_utils.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -o valid.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -o post.o >/dev/null 2>&1 libtool: compile: mpicc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -o piv.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link mpicc -fopenmp -DENABLE_MPI -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libgpiv_mpi.la -rpath /usr/lib/x86_64-linux-gnu genpar.lo cam.lo cam_par.lo trig.lo trig_par.lo img.lo img_utils.lo imgproc.lo imgproc_deform.lo imgproc_par.lo io.lo io_png.lo io_raw.lo io_hdf.lo io_dav.lo utils.lo utils_alloc.lo piv.lo piv_par.lo piv_utils.lo valid.lo valid_par.lo post.lo post_par.lo post_utils.lo my_utils.lo -lfftw3_threads -lgomp -lmpi -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 libtool: link: x86_64-linux-gnu-gcc -shared -fPIC -DPIC .libs/genpar.o .libs/cam.o .libs/cam_par.o .libs/trig.o .libs/trig_par.o .libs/img.o .libs/img_utils.o .libs/imgproc.o .libs/imgproc_deform.o .libs/imgproc_par.o .libs/io.o .libs/io_png.o .libs/io_raw.o .libs/io_hdf.o .libs/io_dav.o .libs/utils.o .libs/utils_alloc.o .libs/piv.o .libs/piv_par.o .libs/piv_utils.o .libs/valid.o .libs/valid_par.o .libs/post.o .libs/post_par.o .libs/post_utils.o .libs/my_utils.o -lfftw3_threads -lgomp -lmpi -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 -fopenmp -g -O2 -fstack-protector-strong -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -fopenmp -Wl,-soname -Wl,libgpiv_mpi.so.3 -o .libs/libgpiv_mpi.so.3.0.0 /usr/bin/ld: .libs/img.o: in function `gpiv_img_read_header': ./build-mpi/lib/../../lib/img.c:939: warning: the `gets' function is dangerous and should not be used. libtool: link: (cd ".libs" && rm -f "libgpiv_mpi.so.3" && ln -s "libgpiv_mpi.so.3.0.0" "libgpiv_mpi.so.3") libtool: link: (cd ".libs" && rm -f "libgpiv_mpi.so" && ln -s "libgpiv_mpi.so.3.0.0" "libgpiv_mpi.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libgpiv_mpi.a genpar.o cam.o cam_par.o trig.o trig_par.o img.o img_utils.o imgproc.o imgproc_deform.o imgproc_par.o io.o io_png.o io_raw.o io_hdf.o io_dav.o utils.o utils_alloc.o piv.o piv_par.o piv_utils.o valid.o valid_par.o post.o post_par.o post_utils.o my_utils.o libtool: link: x86_64-linux-gnu-ranlib .libs/libgpiv_mpi.a libtool: link: ( cd ".libs" && rm -f "libgpiv_mpi.la" && ln -s "../libgpiv_mpi.la" "libgpiv_mpi.la" ) make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/libgpiv-0.6.1' /usr/bin/make -C build-doc/ doxygen-doc make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' rm -rf doxygen-doc SRCDIR='..' PROJECT='libgpiv' VERSION='0.6.1' PERL_PATH='/usr/bin/perl' HAVE_DOT='NO' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' DOCDIR=doxygen-doc /usr/bin/doxygen ../Doxyfile warning: Tag 'DETAILS_AT_TOP' at line 24 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 69 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 120 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 131 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 184 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 185 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 217 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 221 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 222 of file '../Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. /build/libgpiv-0.6.1/include/gpiv/gpiv-cam.h:159: warning: found documented return type for gpiv_cam_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-cam.h:206: warning: found documented return type for gpiv_cam_parameters__set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-cam.h:233: warning: found documented return type for gpiv_cam_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-cam.h:173: warning: found documented return type for gpiv_cam_read_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:180: warning: argument 'genpar_par' of command @param is not found in the argument list of gpiv_genpar_cp_parameters(const GpivGenPar *gen_par) /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:180: warning: The following parameter of gpiv_genpar_cp_parameters(const GpivGenPar *gen_par) is not documented: parameter 'gen_par' /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:107: warning: argument 'gen_par_par_default' of command @param is not found in the argument list of gpiv_genpar_default_parameters(GpivGenPar *gen_par_default, const gboolean force) /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:107: warning: The following parameter of gpiv_genpar_default_parameters(GpivGenPar *gen_par_default, const gboolean force) is not documented: parameter 'gen_par_default' /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:107: warning: found documented return type for gpiv_genpar_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:93: warning: found documented return type for gpiv_genpar_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:166: warning: found documented return type for gpiv_genpar_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:121: warning: argument 'general_par' of command @param is not found in the argument list of gpiv_genpar_read_parameters(FILE *fp_h, GpivGenPar *gen_par, const gboolean print_par) /build/libgpiv-0.6.1/include/gpiv/gpiv-genpar.h:121: warning: found documented return type for gpiv_genpar_read_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:237: warning: found documented return type for gpiv_img_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:333: warning: found documented return type for gpiv_img_fprint_header that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:386: warning: found documented return type for gpiv_img_fprint_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:361: warning: found documented return type for gpiv_img_ovwrt_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:208: warning: found documented return type for gpiv_img_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:319: warning: found documented return type for gpiv_img_print_header that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:372: warning: found documented return type for gpiv_img_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img.h:251: warning: found documented return type for gpiv_img_read_header that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-img_utils.h:81: warning: found documented return type for gpiv_free_img that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-imgproc.h:153: warning: found documented return type for gpiv_imgproc_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-imgproc.h:139: warning: found documented return type for gpiv_imgproc_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-imgproc.h:212: warning: found documented return type for gpiv_imgproc_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-imgproc.h:167: warning: argument 'image_proc_par' from the argument list of gpiv_imgproc_read_parameters has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-imgproc.h:167: warning: found documented return type for gpiv_imgproc_read_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-io.h:154: warning: found documented return type for gpiv_io_make_fname that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv.h:254: warning: found documented return type for gpiv_fread_fftw_wisdom that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv.h:266: warning: found documented return type for gpiv_fwrite_fftw_wisdom that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv.h:218: warning: found documented return type for gpiv_piv_isizadapt that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_par.h:317: warning: found documented return type for gpiv_piv_cp_undef_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_par.h:182: warning: found documented return type for gpiv_piv_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_par.h:213: warning: found documented return type for gpiv_piv_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_par.h:292: warning: found documented return type for gpiv_piv_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_par.h:227: warning: found documented return type for gpiv_piv_read_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:220: warning: found documented return type for gpiv_free_cov that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:95: warning: argument 'piv_data' from the argument list of gpiv_free_pivdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:95: warning: found documented return type for gpiv_free_pivdata that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:61: warning: argument 'piv_data' from the argument list of gpiv_null_pivdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-piv_utils.h:61: warning: found documented return type for gpiv_null_pivdata that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_par.h:248: warning: argument 'post_par' from the argument list of gpiv_post_check_parameters_read has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_par.h:204: warning: found documented return type for gpiv_post_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_par.h:190: warning: found documented return type for gpiv_post_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_par.h:267: warning: found documented return type for gpiv_post_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_par.h:233: warning: found documented return type for gpiv_post_read_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:163: warning: found documented return type for gpiv_cumhisto that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:136: warning: argument 'bin_data' from the argument list of gpiv_free_bindata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:136: warning: found documented return type for gpiv_free_bindata that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:82: warning: argument 'scal_data' from the argument list of gpiv_free_scdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:82: warning: found documented return type for gpiv_free_scdata that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:148: warning: found documented return type for gpiv_histo that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:113: warning: argument 'bin_data' from the argument list of gpiv_null_bindata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:113: warning: found documented return type for gpiv_null_bindata that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:57: warning: argument 'scal_data' from the argument list of gpiv_null_scdata has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-post_utils.h:57: warning: found documented return type for gpiv_null_scdata that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-trig.h:192: warning: found documented return type for gpiv_trig_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-trig.h:237: warning: found documented return type for gpiv_trig_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-trig.h:264: warning: found documented return type for gpiv_trig_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-trig.h:206: warning: found documented return type for gpiv_trig_read_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-trig.h:251: warning: argument 'trig_par' from the argument list of gpiv_trig_test_parameter has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-utils.h:194: warning: found documented return type for gpiv_error that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils.h:59: warning: found documented return type for gpiv_scan_parameter that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils.h:181: warning: found documented return type for gpiv_warning that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:330: warning: found documented return type for gpiv_free_double_matrix that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:464: warning: found documented return type for gpiv_free_dvector that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:492: warning: found documented return type for gpiv_free_dvector_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:385: warning: found documented return type for gpiv_free_fftw_complex_matrix that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:357: warning: found documented return type for gpiv_free_fftw_real_matrix that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:688: warning: found documented return type for gpiv_free_gbolvector that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:303: warning: found documented return type for gpiv_free_imatrix that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:263: warning: The following parameter of gpiv_free_imatrix_index(gint **m, const long nrl, const long nrh, const long ncl, const long nch) is not documented: parameter 'm' /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:263: warning: found documented return type for gpiv_free_imatrix_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:632: warning: found documented return type for gpiv_free_ivector that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:660: warning: found documented return type for gpiv_free_ivector_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:118: warning: found documented return type for gpiv_free_matrix that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:235: warning: found documented return type for gpiv_free_matrix_guint16 that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:210: warning: found documented return type for gpiv_free_matrix_guint8 that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:150: warning: found documented return type for gpiv_free_matrix_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:520: warning: found documented return type for gpiv_free_nulvector that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:548: warning: found documented return type for gpiv_free_nulvector_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:184: warning: found documented return type for gpiv_free_ucmatrix that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:576: warning: found documented return type for gpiv_free_ulvector that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:604: warning: found documented return type for gpiv_free_ulvector_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:408: warning: found documented return type for gpiv_free_vector that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-utils_alloc.h:436: warning: found documented return type for gpiv_free_vector_index that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid.h:176: warning: found documented return type for gpiv_cumhisto_eqdatbin_gnuplot that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid.h:162: warning: argument 'piv_data' from the argument list of gpiv_valid_gradient has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-valid.h:162: warning: found documented return type for gpiv_valid_gradient that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:185: warning: argument 'valid_par' from the argument list of gpiv_valid_check_parameters_read has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:140: warning: found documented return type for gpiv_valid_default_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:257: warning: found documented return type for gpiv_valid_dupl_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:125: warning: argument 'valid_par' from the argument list of gpiv_valid_parameters_set has multiple @param documentation sections /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:125: warning: found documented return type for gpiv_valid_parameters_set that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:231: warning: found documented return type for gpiv_valid_print_parameters that does not return anything /build/libgpiv-0.6.1/include/gpiv/gpiv-valid_par.h:169: warning: found documented return type for gpiv_valid_read_parameters that does not return anything sh: 1: dot: not found sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.png"' /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.png"' sh: 1: dot: not found sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.png"' /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/graph_legend.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/graph_legend.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/graph_legend.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.png"' sh: 1: dot: not found sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.png"' /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_55e5dd6bed1dd48cd2adb65f5bf69b0f_dep.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_55e5dd6bed1dd48cd2adb65f5bf69b0f_dep.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_55e5dd6bed1dd48cd2adb65f5bf69b0f_dep.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.png"' sh: 1: dot: not found /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.dot:1: error: Problems running dot: exit code=127, command='dot', arguments='"/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.dot" -Tpng -o "/build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.png"' error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_55e5dd6bed1dd48cd2adb65f5bf69b0f_dep.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/dir_d44c64559bbebec7f509842c48db8b23_dep.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-genpar_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-img__utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-imgproc_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-io_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__par_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-piv__utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__par_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-post__utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-utils__alloc_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv-valid__par_8h__dep__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/gpiv_8h__incl.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_image__coll__graph.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_post_par__coll__graph.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. error: problems opening map file /build/libgpiv-0.6.1/build-doc/doxygen-doc/html/struct_____gpiv_trig_par__coll__graph.map for inclusion in the docs! If you installed Graphviz/dot after a previous failing run, try deleting the output directory and rerun doxygen. echo Timestamp >doxygen-doc/libgpiv.tag make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_auto_test -O--builddirectory=build-doc cd build-doc && make -j15 check "TESTSUITEFLAGS=-j15 --verbose" VERBOSE=1 make[1]: Entering directory '/build/libgpiv-0.6.1/build-doc' Making check in lib make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc/lib' /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genpar.lo ../../lib/genpar.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam.lo ../../lib/cam.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cam_par.lo ../../lib/cam_par.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig.lo ../../lib/trig.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trig_par.lo ../../lib/trig_par.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img.lo ../../lib/img.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o img_utils.lo ../../lib/img_utils.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc.lo ../../lib/imgproc.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_deform.lo ../../lib/imgproc_deform.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o imgproc_par.lo ../../lib/imgproc_par.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io.lo ../../lib/io.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_png.lo ../../lib/io_png.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_raw.lo ../../lib/io_raw.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_hdf.lo ../../lib/io_hdf.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o io_dav.lo ../../lib/io_dav.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -fPIC -DPIC -o .libs/img_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -fPIC -DPIC -o .libs/trig_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -fPIC -DPIC -o .libs/cam.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -fPIC -DPIC -o .libs/cam_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -fPIC -DPIC -o .libs/trig.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -fPIC -DPIC -o .libs/img.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -fPIC -DPIC -o .libs/imgproc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig_par.c -o trig_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -fPIC -DPIC -o .libs/genpar.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -fPIC -DPIC -o .libs/io_raw.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -fPIC -DPIC -o .libs/io_png.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -fPIC -DPIC -o .libs/imgproc_deform.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam_par.c -o cam_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -fPIC -DPIC -o .libs/io.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -fPIC -DPIC -o .libs/io_dav.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/cam.c -o cam.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -fPIC -DPIC -o .libs/io_hdf.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -fPIC -DPIC -o .libs/imgproc_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/trig.c -o trig.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.lo ../../lib/utils.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils_alloc.lo ../../lib/utils_alloc.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv.lo ../../lib/piv.c /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_par.lo ../../lib/piv_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -fPIC -DPIC -o .libs/utils_alloc.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -fPIC -DPIC -o .libs/utils.o ../../lib/io.c: In function 'gpiv_find_pivdata_origin': ../../lib/io.c:379:28: warning: comparison between pointer and zero character constant [-Wpointer-compare] 379 | if (strstr(line, "rr") != '\0') { | ^~ ../../lib/io.c:379:9: note: did you mean to dereference the pointer? 379 | if (strstr(line, "rr") != '\0') { | ^ ../../lib/io.c:381:38: warning: comparison between pointer and zero character constant [-Wpointer-compare] 381 | } else if (strstr(line, "DaVis") != '\0') { | ^~ ../../lib/io.c:381:16: note: did you mean to dereference the pointer? 381 | } else if (strstr(line, "DaVis") != '\0') { | ^ ../../lib/img.c: In function 'gpiv_img_read_header': ../../lib/img.c:939:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 939 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/img.c:939:28: warning: comparison between pointer and integer 939 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'find_data_scaled': ../../lib/io.c:1201:30: warning: comparison between pointer and zero character constant [-Wpointer-compare] 1201 | if (strstr(line,"scale") != '\0') { | ^~ ../../lib/io.c:1201:9: note: did you mean to dereference the pointer? 1201 | if (strstr(line,"scale") != '\0') { | ^ ../../lib/io.c: In function 'count_asciidata': ../../lib/io.c:1243:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 1243 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/io.c:1243:28: warning: comparison between pointer and integer 1243 | while (gets (line) != NULL) { | ^~ ../../lib/io.c: In function 'read_pivdata_from_stdin': ../../lib/io.c:1579:27: warning: comparison between pointer and integer 1579 | while (gets (line[k]) != NULL) { | ^~ ../../lib/io.c: In function 'read_scdata_from_stdin': ../../lib/io.c:1671:27: warning: comparison between pointer and integer 1671 | while (gets (line[k]) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -fPIC -DPIC -o .libs/piv.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_dav.c -o io_dav.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -fPIC -DPIC -o .libs/piv_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img_utils.c -o img_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/genpar.c -o genpar.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_par.c -o imgproc_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_raw.c -o io_raw.o >/dev/null 2>&1 ../../lib/utils.c: In function 'gpiv_add_datetime_to_comment': ../../lib/utils.c:232:5: warning: 'g_date_set_time' is deprecated: Use 'g_date_set_time_t' instead [-Wdeprecated-declarations] 232 | g_date_set_time(gdate, time (NULL)); | ^~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:45, from ../../include/gpiv.h:202, from ../../lib/utils.c:51: /usr/include/glib-2.0/glib/gdate.h:205:14: note: declared here 205 | void g_date_set_time (GDate *date, | ^~~~~~~~~~~~~~~ ../../lib/utils.c:234:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_day" 234 | g_date_day (gdate), | ^ ~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:235:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_month" 235 | g_date_month (gdate), | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:236:13: warning: Deprecated pre-processor symbol: replace with "g_date_get_year" 236 | g_date_year (gdate)); | ^ ~~~~~~~~~~~~~~~~~~~~~ ../../lib/utils.c:247:36: warning: too many arguments for format [-Wformat-extra-args] 247 | comment = g_strdup_printf ("%s%s", cdate, ctime, NULL); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_iph': ../../lib/utils.c:708:9: warning: writing into constant object (argument 3) [-Wformat=] 708 | sscanf (line, "%s %d", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_cph': ../../lib/utils.c:748:9: warning: writing into constant object (argument 3) [-Wformat=] 748 | sscanf (line, "%s %c", par_name, parameter); | ^~~~~~ ../../lib/utils.c: In function 'gpiv_scan_fph': ../../lib/utils.c:789:9: warning: writing into constant object (argument 3) [-Wformat=] 789 | sscanf (line, "%s %f", par_name, parameter); | ^~~~~~ ../../lib/piv_par.c: In function 'gpiv_piv_read_parameters': ../../lib/piv_par.c:279:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 279 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/piv_par.c:279:28: warning: comparison between pointer and integer 279 | while (gets (line) != NULL) { | ^~ /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o piv_utils.lo ../../lib/piv_utils.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_png.c -o io_png.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils_alloc.c -o utils_alloc.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc_deform.c -o imgproc_deform.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid.lo ../../lib/valid.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/utils.c -o utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/imgproc.c -o imgproc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o valid_par.lo ../../lib/valid_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io_hdf.c -o io_hdf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post.lo ../../lib/post.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -fPIC -DPIC -o .libs/piv_utils.o /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_par.lo ../../lib/post_par.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/io.c -o io.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -fPIC -DPIC -o .libs/valid_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -fPIC -DPIC -o .libs/valid.o /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o post_utils.lo ../../lib/post_utils.c libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/img.c -o img.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -fPIC -DPIC -o .libs/post_par.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -fPIC -DPIC -o .libs/post.o /bin/bash ../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o my_utils.lo ../../lib/my_utils.c ../../lib/valid_par.c: In function 'gpiv_valid_read_parameters': ../../lib/valid_par.c:184:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 184 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/valid_par.c:184:28: warning: comparison between pointer and integer 184 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -fPIC -DPIC -o .libs/post_utils.o ../../lib/post_par.c: In function 'gpiv_post_read_parameters': ../../lib/post_par.c:295:16: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] 295 | while (gets (line) != NULL) { | ^~~~ | fgets ../../lib/post_par.c:295:28: warning: comparison between pointer and integer 295 | while (gets (line) != NULL) { | ^~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid_par.c -o valid_par.o >/dev/null 2>&1 ../../lib/piv_utils.c: In function 'gpiv_piv_gnuplot': ../../lib/piv_utils.c:581:47: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 581 | "gnuplot -bg %s -geometry %dx%d %s", | ^~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, 583 | fname_cmd); | ~~~~~~~~~ ../../lib/piv_utils.c:580:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 580 | snprintf (command, GPIV_MAX_CHARS, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 | "gnuplot -bg %s -geometry %dx%d %s", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 | fname_cmd); | ~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_par.c -o piv_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -fPIC -DPIC -o .libs/my_utils.o libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv_utils.c -o piv_utils.o >/dev/null 2>&1 ../../lib/my_utils.c: In function 'my_utils_fopen_tmp': ../../lib/my_utils.c:55:27: warning: implicit declaration of function 'g_mkdir'; did you mean 'rmdir'? [-Wimplicit-function-declaration] 55 | if ((return_val = g_mkdir(tmp_user_dir, 700)) != 0) { | ^~~~~~~ | rmdir ../../lib/post_utils.c: In function 'gpiv_scalar_gnuplot': ../../lib/post_utils.c:192:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:192:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 192 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_par.c -o post_par.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/my_utils.c -o my_utils.o >/dev/null 2>&1 ../../lib/post_utils.c: In function 'gpiv_histo_gnuplot': ../../lib/post_utils.c:539:72: warning: '%s' directive output may be truncated writing up to 79 bytes into a region of size 53 [-Wformat-truncation=] 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~ ../../lib/post_utils.c:539:5: note: 'snprintf' output 28 or more bytes (assuming 107) into a destination of size 80 539 | snprintf (command, GPIV_MAX_CHARS, "gnuplot -bg %s -geometry %dx%d %s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 | GNUPLOT_DISPLAY_COLOR, GNUPLOT_DISPLAY_SIZE, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 | GNUPLOT_DISPLAY_SIZE, fname_cmd); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post_utils.c -o post_utils.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/valid.c -o valid.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/post.c -o post.o >/dev/null 2>&1 libtool: compile: x86_64-linux-gnu-gcc -fopenmp -DHAVE_CONFIG_H -I. -I../../lib -I.. -I../../include -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/lib/realtime/include -I/usr/include/hdf5/serial -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../lib/piv.c -o piv.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link x86_64-linux-gnu-gcc -fopenmp -g -O2 -ffile-prefix-map=/build/libgpiv-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libgpiv.la -rpath /usr/lib/x86_64-linux-gnu genpar.lo cam.lo cam_par.lo trig.lo trig_par.lo img.lo img_utils.lo imgproc.lo imgproc_deform.lo imgproc_par.lo io.lo io_png.lo io_raw.lo io_hdf.lo io_dav.lo utils.lo utils_alloc.lo piv.lo piv_par.lo piv_utils.lo valid.lo valid_par.lo post.lo post_par.lo post_utils.lo my_utils.lo -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 libtool: link: x86_64-linux-gnu-gcc -shared -fPIC -DPIC .libs/genpar.o .libs/cam.o .libs/cam_par.o .libs/trig.o .libs/trig_par.o .libs/img.o .libs/img_utils.o .libs/imgproc.o .libs/imgproc_deform.o .libs/imgproc_par.o .libs/io.o .libs/io_png.o .libs/io_raw.o .libs/io_hdf.o .libs/io_dav.o .libs/utils.o .libs/utils_alloc.o .libs/piv.o .libs/piv_par.o .libs/piv_utils.o .libs/valid.o .libs/valid_par.o .libs/post.o .libs/post_par.o .libs/post_utils.o .libs/my_utils.o -lfftw3_threads -lgomp -lpng -lglib-2.0 -lgsl -lgslcblas -lm -lhdf5 -lfftw3 -fopenmp -g -O2 -fstack-protector-strong -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -fopenmp -Wl,-soname -Wl,libgpiv.so.3 -o .libs/libgpiv.so.3.0.0 /usr/bin/ld: .libs/img.o: in function `gpiv_img_read_header': ./build-doc/lib/../../lib/img.c:939: warning: the `gets' function is dangerous and should not be used. libtool: link: (cd ".libs" && rm -f "libgpiv.so.3" && ln -s "libgpiv.so.3.0.0" "libgpiv.so.3") libtool: link: (cd ".libs" && rm -f "libgpiv.so" && ln -s "libgpiv.so.3.0.0" "libgpiv.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libgpiv.a genpar.o cam.o cam_par.o trig.o trig_par.o img.o img_utils.o imgproc.o imgproc_deform.o imgproc_par.o io.o io_png.o io_raw.o io_hdf.o io_dav.o utils.o utils_alloc.o piv.o piv_par.o piv_utils.o valid.o valid_par.o post.o post_par.o post_utils.o my_utils.o libtool: link: x86_64-linux-gnu-ranlib .libs/libgpiv.a libtool: link: ( cd ".libs" && rm -f "libgpiv.la" && ln -s "../libgpiv.la" "libgpiv.la" ) make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc/lib' Making check in include make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc/include' Making check in gpiv make[3]: Entering directory '/build/libgpiv-0.6.1/build-doc/include/gpiv' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-doc/include/gpiv' make[3]: Entering directory '/build/libgpiv-0.6.1/build-doc/include' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-doc/include' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc/include' make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1/build-doc' create-stamp debian/debhelper-build-stamp dh build --builddirectory=build-serial dh_update_autotools_config -O--builddirectory=build-serial dh_autoreconf -O--builddirectory=build-serial dh_autoreconf: warning: Only runs once, see dh-autoreconf(7) debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-serial -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-serial && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== dh_auto_configure --builddirectory=build-mpi -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi cd build-mpi && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes configure: WARNING: "libmpi HAS BEEN installed" checking for main in -lmpi... yes checking for mpi.h... yes checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Message Passing Interface (MPI) for processing on distributed memory systems building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-doc -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-doc && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_build --builddirectory=build-serial cd build-serial && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_build --builddirectory=build-mpi cd build-mpi && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/libgpiv-0.6.1' /usr/bin/make -C build-doc/ doxygen-doc make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' make[2]: Nothing to be done for 'doxygen-doc'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_auto_test -O--builddirectory=build-serial cd build-serial && make -j15 check "TESTSUITEFLAGS=-j15 --verbose" VERBOSE=1 make[1]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making check in lib make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making check in include make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making check in gpiv make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[1]: Leaving directory '/build/libgpiv-0.6.1/build-serial' create-stamp debian/debhelper-build-stamp dh build --builddirectory=build-mpi dh_update_autotools_config -O--builddirectory=build-mpi dh_autoreconf -O--builddirectory=build-mpi dh_autoreconf: warning: Only runs once, see dh-autoreconf(7) debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-serial -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-serial && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== dh_auto_configure --builddirectory=build-mpi -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi cd build-mpi && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp --enable-mpi checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes configure: WARNING: "libmpi HAS BEEN installed" checking for main in -lmpi... yes checking for mpi.h... yes checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Message Passing Interface (MPI) for processing on distributed memory systems building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_configure --builddirectory=build-doc -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp cd build-doc && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --sysconfdir=/etc --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --enable-omp checking whether build environment is sane... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking for library containing strerror... none required checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-gcc... (cached) x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... (cached) yes checking whether x86_64-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-linux-gnu-gcc option to enable C11 features... (cached) none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... (cached) yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for egrep... (cached) /bin/grep -E checking whether ln -s works... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for gawk... (cached) mawk checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib checking for size_t... yes checking for gnuplot... false checking for perl... true checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-doxygen... no checking for doxygen... /usr/bin/doxygen checking for x86_64-linux-gnu-perl... no checking for perl... /usr/bin/perl checking for a BSD-compatible install... /usr/bin/install -c checking for a race-free mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of x86_64-linux-gnu-gcc... none checking dependency style of x86_64-linux-gnu-g++... none checking for fftw_plan_dft_r2c_2d in -lfftw3... yes checking for H5Fopen in -lhdf5... yes checking for x86_64-linux-gnu-pkg-config... /usr/bin/x86_64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for glib-2.0 >= 2.0.0... yes checking for main in -lm... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking for g_malloc0 in -lglib-2.0... yes checking for main in -lpng... yes checking for pnmtopng... true checking for main in -lgomp... yes checking for omp.h... yes checking for main in -lfftw3_threads... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for time.h... yes checking for unistd.h... (cached) yes checking for fftw3.h... yes checking for hdf5.h... yes checking for png.h... yes checking for memset... yes checking for sqrt... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating include/Makefile config.status: creating include/gpiv/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing libtool commands config.status: executing depfiles commands ==================================================================== Configuration succesfully finished building parallel library using Open Multi-Processing (OMP) for processing on shared memory systems Type 'make' and 'make install' to build and install libgpiv Type 'make doxygen-doc/-(un)install' for the API documentation ==================================================================== make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_build --builddirectory=build-serial cd build-serial && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_build --builddirectory=build-mpi cd build-mpi && make -j15 make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make all-recursive make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making all in lib make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making all in include make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making all in gpiv make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/libgpiv-0.6.1' /usr/bin/make -C build-doc/ doxygen-doc make[2]: Entering directory '/build/libgpiv-0.6.1/build-doc' make[2]: Nothing to be done for 'doxygen-doc'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-doc' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_auto_test -O--builddirectory=build-mpi cd build-mpi && make -j15 check "TESTSUITEFLAGS=-j15 --verbose" VERBOSE=1 make[1]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making check in lib make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making check in include make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making check in gpiv make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --builddirectory=build-doc dh_testroot -O--builddirectory=build-doc dh_prep -O--builddirectory=build-doc debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_install --builddirectory=build-serial cd build-serial && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libgpiv.la '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so.3 || { rm -f libgpiv.so.3 && ln -s libgpiv.so.3.0.0 libgpiv.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so || { rm -f libgpiv.so && ln -s libgpiv.so.3.0.0 libgpiv.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv.lai /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.la libtool: install: /usr/bin/install -c .libs/libgpiv.a /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_install --builddirectory=build-mpi --destdir=/build/libgpiv-0.6.1/debian/tmp-mpi cd build-mpi && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp-mpi AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libgpiv_mpi.la '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3 || { rm -f libgpiv_mpi.so.3 && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so || { rm -f libgpiv_mpi.so && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.lai /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.la libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.a /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/libgpiv-0.6.1' install -d /build/libgpiv-0.6.1/debian/usr/share/doc/libgpiv3-doc/html find build-doc/doxygen-doc/html/ -type f ! -name '*.md5' -exec \ install -D '{}' -t "/build/libgpiv-0.6.1/debian/tmp/usr/share/doc/libgpiv3-doc/html/" \; #/usr/bin/make -C build-doc/ doxygen-install make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_install -O--builddirectory=build-doc dh_installdocs -O--builddirectory=build-doc dh_installchangelogs -O--builddirectory=build-doc dh_systemd_enable -O--builddirectory=build-doc dh_installinit -O--builddirectory=build-doc dh_systemd_start -O--builddirectory=build-doc dh_perl -O--builddirectory=build-doc dh_link -O--builddirectory=build-doc dh_strip_nondeterminism -O--builddirectory=build-doc dh_compress -O--builddirectory=build-doc dh_fixperms -O--builddirectory=build-doc dh_missing -O--builddirectory=build-doc debian/rules override_dh_strip make[1]: Entering directory '/build/libgpiv-0.6.1' dh_strip --dbgsym-migration='libgpiv3-dbg (<<0.6.1-5~)' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_makeshlibs -O--builddirectory=build-doc dh_shlibdeps -O--builddirectory=build-doc dh_installdeb -O--builddirectory=build-doc dh_gencontrol -O--builddirectory=build-doc dpkg-gencontrol: warning: Depends field of package libgpiv3-common: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--builddirectory=build-doc dh_builddeb -O--builddirectory=build-doc dpkg-deb: building package 'libgpiv3-common' in '../libgpiv3-common_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3' in '../libgpiv3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dev' in '../libgpiv3-dev_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dbgsym' in '../libgpiv3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-doc' in '../libgpiv3-doc_0.6.1-7.1_all.deb'. dpkg-deb: building package 'libgpiv-mpi3' in '../libgpiv-mpi3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3-dbgsym' in '../libgpiv-mpi3-dbgsym_0.6.1-7.1_amd64.deb'. dh binary --builddirectory=build-serial dh_testroot -O--builddirectory=build-serial dh_prep -O--builddirectory=build-serial debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_install --builddirectory=build-serial cd build-serial && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libgpiv.la '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so.3 || { rm -f libgpiv.so.3 && ln -s libgpiv.so.3.0.0 libgpiv.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so || { rm -f libgpiv.so && ln -s libgpiv.so.3.0.0 libgpiv.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv.lai /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.la libtool: install: /usr/bin/install -c .libs/libgpiv.a /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_install --builddirectory=build-mpi --destdir=/build/libgpiv-0.6.1/debian/tmp-mpi cd build-mpi && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp-mpi AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libgpiv_mpi.la '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3 || { rm -f libgpiv_mpi.so.3 && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so || { rm -f libgpiv_mpi.so && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.lai /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.la libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.a /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/libgpiv-0.6.1' install -d /build/libgpiv-0.6.1/debian/usr/share/doc/libgpiv3-doc/html find build-doc/doxygen-doc/html/ -type f ! -name '*.md5' -exec \ install -D '{}' -t "/build/libgpiv-0.6.1/debian/tmp/usr/share/doc/libgpiv3-doc/html/" \; #/usr/bin/make -C build-doc/ doxygen-install make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_install -O--builddirectory=build-serial dh_installdocs -O--builddirectory=build-serial dh_installchangelogs -O--builddirectory=build-serial dh_systemd_enable -O--builddirectory=build-serial dh_installinit -O--builddirectory=build-serial dh_systemd_start -O--builddirectory=build-serial dh_perl -O--builddirectory=build-serial dh_link -O--builddirectory=build-serial dh_strip_nondeterminism -O--builddirectory=build-serial dh_compress -O--builddirectory=build-serial dh_fixperms -O--builddirectory=build-serial dh_missing -O--builddirectory=build-serial debian/rules override_dh_strip make[1]: Entering directory '/build/libgpiv-0.6.1' dh_strip --dbgsym-migration='libgpiv3-dbg (<<0.6.1-5~)' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_makeshlibs -O--builddirectory=build-serial dh_shlibdeps -O--builddirectory=build-serial dh_installdeb -O--builddirectory=build-serial dh_gencontrol -O--builddirectory=build-serial dpkg-gencontrol: warning: Depends field of package libgpiv3-common: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--builddirectory=build-serial dh_builddeb -O--builddirectory=build-serial dpkg-deb: building package 'libgpiv3-common' in '../libgpiv3-common_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3' in '../libgpiv3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dbgsym' in '../libgpiv3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dev' in '../libgpiv3-dev_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-doc' in '../libgpiv3-doc_0.6.1-7.1_all.deb'. dpkg-deb: building package 'libgpiv-mpi3' in '../libgpiv-mpi3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3-dbgsym' in '../libgpiv-mpi3-dbgsym_0.6.1-7.1_amd64.deb'. dh binary --builddirectory=build-mpi dh_testroot -O--builddirectory=build-mpi dh_prep -O--builddirectory=build-mpi debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/libgpiv-0.6.1' dh_auto_install --builddirectory=build-serial cd build-serial && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-serial' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libgpiv.la '/build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so.3 || { rm -f libgpiv.so.3 && ln -s libgpiv.so.3.0.0 libgpiv.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv.so.3.0.0 libgpiv.so || { rm -f libgpiv.so && ln -s libgpiv.so.3.0.0 libgpiv.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv.lai /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.la libtool: install: /usr/bin/install -c .libs/libgpiv.a /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp/usr/lib/x86_64-linux-gnu/libgpiv.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-serial/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-serial' make[4]: Entering directory '/build/libgpiv-0.6.1/build-serial' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-serial' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-serial' dh_auto_install --builddirectory=build-mpi --destdir=/build/libgpiv-0.6.1/debian/tmp-mpi cd build-mpi && make -j1 install DESTDIR=/build/libgpiv-0.6.1/debian/tmp-mpi AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/libgpiv-0.6.1/build-mpi' Making install in lib make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/lib' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libgpiv_mpi.la '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.so.3.0.0 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.so.3.0.0 libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3 || { rm -f libgpiv_mpi.so.3 && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so.3; }; }) libtool: install: (cd /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu && { ln -s -f libgpiv_mpi.so.3.0.0 libgpiv_mpi.so || { rm -f libgpiv_mpi.so && ln -s libgpiv_mpi.so.3.0.0 libgpiv_mpi.so; }; }) libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.lai /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.la libtool: install: /usr/bin/install -c .libs/libgpiv_mpi.a /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: chmod 644 /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: install: x86_64-linux-gnu-ranlib /build/libgpiv-0.6.1/debian/tmp-mpi/usr/lib/x86_64-linux-gnu/libgpiv_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/lib' Making install in include make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' Making install in gpiv make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' /usr/bin/install -c -m 644 ../../../include/gpiv/gpiv-genpar.h ../../../include/gpiv/gpiv-io.h ../../../include/gpiv/gpiv-utils.h ../../../include/gpiv/gpiv-utils_alloc.h ../../../include/gpiv/gpiv-cam.h ../../../include/gpiv/gpiv-trig.h ../../../include/gpiv/gpiv-img.h ../../../include/gpiv/gpiv-img_utils.h ../../../include/gpiv/gpiv-imgproc.h ../../../include/gpiv/gpiv-piv.h ../../../include/gpiv/gpiv-piv_par.h ../../../include/gpiv/gpiv-piv_utils.h ../../../include/gpiv/gpiv-valid.h ../../../include/gpiv/gpiv-valid_par.h ../../../include/gpiv/gpiv-post.h ../../../include/gpiv/gpiv-post_par.h ../../../include/gpiv/gpiv-post_utils.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include/gpiv' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include/gpiv' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Entering directory '/build/libgpiv-0.6.1/build-mpi/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' /usr/bin/install -c -m 644 ../../include/gpiv.h '/build/libgpiv-0.6.1/debian/tmp-mpi/usr/include' make[5]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi/include' make[3]: Entering directory '/build/libgpiv-0.6.1/build-mpi' make[4]: Entering directory '/build/libgpiv-0.6.1/build-mpi' /bin/mkdir -p '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' /usr/bin/install -c -m 644 ../gpiv.conf '/build/libgpiv-0.6.1/debian/tmp-mpi/etc' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[3]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[2]: Leaving directory '/build/libgpiv-0.6.1/build-mpi' make[1]: Leaving directory '/build/libgpiv-0.6.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/libgpiv-0.6.1' install -d /build/libgpiv-0.6.1/debian/usr/share/doc/libgpiv3-doc/html find build-doc/doxygen-doc/html/ -type f ! -name '*.md5' -exec \ install -D '{}' -t "/build/libgpiv-0.6.1/debian/tmp/usr/share/doc/libgpiv3-doc/html/" \; #/usr/bin/make -C build-doc/ doxygen-install make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_install -O--builddirectory=build-mpi dh_installdocs -O--builddirectory=build-mpi dh_installchangelogs -O--builddirectory=build-mpi dh_systemd_enable -O--builddirectory=build-mpi dh_installinit -O--builddirectory=build-mpi dh_systemd_start -O--builddirectory=build-mpi dh_perl -O--builddirectory=build-mpi dh_link -O--builddirectory=build-mpi dh_strip_nondeterminism -O--builddirectory=build-mpi dh_compress -O--builddirectory=build-mpi dh_fixperms -O--builddirectory=build-mpi dh_missing -O--builddirectory=build-mpi debian/rules override_dh_strip make[1]: Entering directory '/build/libgpiv-0.6.1' dh_strip --dbgsym-migration='libgpiv3-dbg (<<0.6.1-5~)' make[1]: Leaving directory '/build/libgpiv-0.6.1' dh_makeshlibs -O--builddirectory=build-mpi dh_shlibdeps -O--builddirectory=build-mpi dh_installdeb -O--builddirectory=build-mpi dh_gencontrol -O--builddirectory=build-mpi dpkg-gencontrol: warning: Depends field of package libgpiv3-common: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--builddirectory=build-mpi dh_builddeb -O--builddirectory=build-mpi dpkg-deb: building package 'libgpiv3-dbgsym' in '../libgpiv3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3' in '../libgpiv3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-dev' in '../libgpiv3-dev_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-doc' in '../libgpiv3-doc_0.6.1-7.1_all.deb'. dpkg-deb: building package 'libgpiv-mpi3' in '../libgpiv-mpi3_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv3-common' in '../libgpiv3-common_0.6.1-7.1_amd64.deb'. dpkg-deb: building package 'libgpiv-mpi3-dbgsym' in '../libgpiv-mpi3-dbgsym_0.6.1-7.1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../libgpiv_0.6.1-7.1_amd64.buildinfo dpkg-genchanges --build=binary -O../libgpiv_0.6.1-7.1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/983291 and its subdirectories I: Current time: Mon Apr 17 22:10:03 -12 2023 I: pbuilder-time-stamp: 1681812603