I: pbuilder: network access will be disabled during build I: Current time: Sat May 18 20:14:08 -12 2024 I: pbuilder-time-stamp: 1716106448 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gudhi_3.7.1+dfsg-1.dsc] I: copying [./gudhi_3.7.1+dfsg.orig.tar.xz] I: copying [./gudhi_3.7.1+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jan 26 03:38:44 2023 -12 gpgv: using RSA key CFC5EF8510851E7355B55E809D11582AFD548CFA gpgv: issuer "gspr@nonempty.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./gudhi_3.7.1+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting gudhi in gudhi-3.7.1+dfsg dpkg-source: info: unpacking gudhi_3.7.1+dfsg.orig.tar.xz dpkg-source: info: unpacking gudhi_3.7.1+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Disable-tests-that-use-DFSG-deleted-data-files.patch dpkg-source: info: applying 0002-Use-system-MathJax.patch dpkg-source: info: applying 0003-Offline-header-for-docs.patch dpkg-source: info: applying 0004-Disable-Sphinx.patch dpkg-source: info: applying 0005-Support-Hera-1.0.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/656416/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='af5c7f3a4c6f440fbb03b00ee90413ff' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='656416' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7LPYtM2v/pbuilderrc_vYdC --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7LPYtM2v/b1 --logfile b1/build.log gudhi_3.7.1+dfsg-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Feb 12 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Feb 12 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/656416/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake (>= 3.5), cython3, debhelper-compat (= 13), dh-python, libboost-filesystem-dev (>= 1.66), libboost-program-options-dev (>= 1.66), libboost-system-dev (>= 1.66), libboost-test-dev (>= 1.66), libboost-thread-dev (>= 1.66), libboost-timer-dev (>= 1.66), libcgal-dev (>= 5.5.1), libcgal-qt5-dev (>= 5.5.1), libeigen3-dev, libgmp-dev, libhera-dev (>= 1.0.0), libqglviewer-dev-qt5, libtbb-dev, pybind11-dev, python3-all-dev, python3-eagerpy, python3-matplotlib, python3-numpy, python3-pot, python3-pybind11, python3-pytest, python3-scipy, python3-setuptools, python3-sklearn, python3-tk, qtbase5-dev, doxygen, graphviz dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake (>= 3.5); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev (>= 1.66); however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev (>= 1.66); however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev (>= 1.66); however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev (>= 1.66); however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev (>= 1.66); however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev (>= 1.66); however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libcgal-dev (>= 5.5.1); however: Package libcgal-dev is not installed. pbuilder-satisfydepends-dummy depends on libcgal-qt5-dev (>= 5.5.1); however: Package libcgal-qt5-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgmp-dev; however: Package libgmp-dev is not installed. pbuilder-satisfydepends-dummy depends on libhera-dev (>= 1.0.0); however: Package libhera-dev is not installed. pbuilder-satisfydepends-dummy depends on libqglviewer-dev-qt5; however: Package libqglviewer-dev-qt5 is not installed. pbuilder-satisfydepends-dummy depends on libtbb-dev; however: Package libtbb-dev is not installed. pbuilder-satisfydepends-dummy depends on pybind11-dev; however: Package pybind11-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-eagerpy; however: Package python3-eagerpy is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pot; however: Package python3-pot is not installed. pbuilder-satisfydepends-dummy depends on python3-pybind11; however: Package python3-pybind11 is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-tk; however: Package python3-tk is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev; however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lyx{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20220623{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libarchive13{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif15{a} libblas3{a} libboost-atomic1.74-dev{a} libboost-atomic1.74.0{a} libboost-chrono1.74-dev{a} libboost-chrono1.74.0{a} libboost-date-time1.74-dev{a} libboost-date-time1.74.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.74-dev{a} libboost-filesystem1.74.0{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-serialization1.74-dev{a} libboost-serialization1.74.0{a} libboost-system-dev{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-test-dev{a} libboost-test1.74-dev{a} libboost-test1.74.0{a} libboost-thread-dev{a} libboost-thread1.74-dev{a} libboost-thread1.74.0{a} libboost-timer-dev{a} libboost-timer1.74-dev{a} libboost-timer1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgal-dev{a} libcgal-qt5-dev{a} libcgraph6{a} libclang-cpp14{a} libclang1-14{a} libcups2{a} libcurl4{a} libdatrie1{a} libdav1d6{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgts-0.7-5{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif1{a} libhera-dev{a} libhwloc15{a} libice-dev{a} libice6{a} libicu72{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} liblab-gamut1{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm14{a} libllvm15{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmd4c0{a} libmpfr-dev{a} libmtdev1{a} libnghttp2-14{a} libnuma1{a} libopenblas-dev{a} libopenblas-pthread-dev{a} libopenblas0{a} libopenblas0-pthread{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libphat-dev{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16{a} libproc2-0{a} libpsl5{a} libpthread-stubs0-dev{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqglviewer-dev-qt5{a} libqglviewer-headers{a} libqglviewer2-qt5{a} libqhull-r8.0{a} libqt5concurrent5{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5opengl5{a} libqt5opengl5-dev{a} libqt5printsupport5{a} libqt5sql5{a} libqt5svg5{a} libqt5svg5-dev{a} libqt5test5{a} libqt5widgets5{a} libqt5xml5{a} libraqm0{a} librav1e0{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsm-dev{a} libsm6{a} libssh2-1{a} libsub-override-perl{a} libsvtav1enc1{a} libtbb-dev{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libx265-199{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxft2{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu-dev{a} libxmu-headers{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxsimd-dev{a} libxslt1.1{a} libxss1{a} libxt-dev{a} libxt6{a} libxxf86vm1{a} libyuv0{a} libz3-4{a} m4{a} man-db{a} media-types{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybind11-dev{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-beniget{a} python3-brotli{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-eagerpy{a} python3-fonttools{a} python3-fs{a} python3-gast{a} python3-iniconfig{a} python3-joblib{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-numpy{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-ply{a} python3-pot{a} python3-py{a} python3-pybind11{a} python3-pyparsing{a} python3-pytest{a} python3-pythran{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-sympy{a} python3-threadpoolctl{a} python3-tk{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} tk8.6-blt2.5{a} unicode-data{a} x11-common{a} x11proto-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus fonts-liberation2 isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libgts-bin libhwloc-plugins libldap-common libltdl-dev libmail-sendmail-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules lynx mesa-vulkan-drivers psmisc publicsuffix python3-bs4 python3-html5lib python3-nose python3-olefile python3-psutil python3-pygments python3-simplejson qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget xdg-user-dirs 0 packages upgraded, 367 newly installed, 0 to remove and 0 not upgraded. Need to get 271 MB of archives. After unpacking 1400 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 11 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-4 [399 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1 [593 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 blt amd64 2.5.3+dfsg-4.1 [14.9 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 libarchive13 amd64 3.6.2-1 [343 kB] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-8 [386 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libjsoncpp25 amd64 1.9.5-4 [78.6 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 librhash0 amd64 1.4.3-3 [134 kB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 cmake-data all 3.25.1-1 [2026 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 cmake amd64 3.25.1-1 [8692 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.32-2+b1 [1302 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 72 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 74 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 75 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 libedit2 amd64 3.1-20221030-2 [93.0 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 libz3-4 amd64 4.8.12-3.1 [7216 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 libllvm14 amd64 1:14.0.6-12 [21.8 MB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 libclang-cpp14 amd64 1:14.0.6-12 [11.1 MB] Get: 87 http://deb.debian.org/debian bookworm/main amd64 libclang1-14 amd64 1:14.0.6-12 [6157 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 doxygen amd64 1.9.4-4 [4611 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-4 [449 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 fonts-lyx all 2.3.7-1 [186 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libcdt5 amd64 2.42.2-7+b3 [39.8 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libcgraph6 amd64 2.42.2-7+b3 [63.2 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libaom3 amd64 3.6.0-1 [1851 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 libdav1d6 amd64 1.0.0-2 [495 kB] Get: 96 http://deb.debian.org/debian bookworm/main amd64 libabsl20220623 amd64 20220623.1-1 [391 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 libgav1-1 amd64 0.18.0-1+b1 [332 kB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 librav1e0 amd64 0.5.1-6 [763 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 libsvtav1enc1 amd64 1.4.1+dfsg-1 [2121 kB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 101 http://deb.debian.org/debian bookworm/main amd64 libyuv0 amd64 0.0~git20230123.b2528b0-1 [168 kB] Get: 102 http://deb.debian.org/debian bookworm/main amd64 libavif15 amd64 0.11.1-1 [93.8 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libde265-0 amd64 1.0.11-1 [185 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libx265-199 amd64 3.5-2+b1 [1150 kB] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libheif1 amd64 1.15.1-1 [215 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get: 110 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.1 [285 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-5 [316 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 libxpm4 amd64 1:3.5.12-1.1 [48.4 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 libgd3 amd64 2.3.3-9 [124 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-1 [1397 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-5+b1 [160 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libltdl7 amd64 2.4.7-5 [393 kB] Get: 121 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get: 122 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get: 125 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2+b1 [43.3 kB] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get: 127 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.12+ds-1 [212 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.12+ds-1 [47.4 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.12+ds-1 [34.2 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 libpathplan4 amd64 2.42.2-7+b3 [42.2 kB] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libgvc6 amd64 2.42.2-7+b3 [678 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libgvpr2 amd64 2.42.2-7+b3 [189 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 liblab-gamut1 amd64 2.42.2-7+b3 [198 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 136 http://deb.debian.org/debian bookworm/main amd64 libxt6 amd64 1:1.2.1-1.1 [186 kB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 libxmu6 amd64 2:1.1.3-3 [60.1 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 libxaw7 amd64 2:1.0.14-1 [201 kB] Get: 139 http://deb.debian.org/debian bookworm/main amd64 graphviz amd64 2.42.2-7+b3 [611 kB] Get: 140 http://deb.debian.org/debian bookworm/main amd64 libavahi-common-data amd64 0.8-9 [107 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 libavahi-common3 amd64 0.8-9 [41.3 kB] Get: 142 http://deb.debian.org/debian bookworm/main amd64 libdbus-1-3 amd64 1.14.6-1 [200 kB] Get: 143 http://deb.debian.org/debian bookworm/main amd64 libavahi-client3 amd64 0.8-9 [45.1 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-20 [9510 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 libboost-atomic1.74.0 amd64 1.74.0+ds1-20 [220 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 libboost-atomic1.74-dev amd64 1.74.0+ds1-20 [221 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 libboost-chrono1.74.0 amd64 1.74.0+ds1-20 [228 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 libboost-chrono1.74-dev amd64 1.74.0+ds1-20 [235 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 libboost-date-time1.74.0 amd64 1.74.0+ds1-20 [217 kB] Get: 151 http://deb.debian.org/debian bookworm/main amd64 libboost-serialization1.74.0 amd64 1.74.0+ds1-20 [318 kB] Get: 152 http://deb.debian.org/debian bookworm/main amd64 libboost-serialization1.74-dev amd64 1.74.0+ds1-20 [359 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 libboost-date-time1.74-dev amd64 1.74.0+ds1-20 [226 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get: 155 http://deb.debian.org/debian bookworm/main amd64 libboost-filesystem1.74.0 amd64 1.74.0+ds1-20 [258 kB] Get: 156 http://deb.debian.org/debian bookworm/main amd64 libboost-system1.74.0 amd64 1.74.0+ds1-20 [218 kB] Get: 157 http://deb.debian.org/debian bookworm/main amd64 libboost-system1.74-dev amd64 1.74.0+ds1-20 [219 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 libboost-filesystem1.74-dev amd64 1.74.0+ds1-20 [279 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 libboost-filesystem-dev amd64 1.74.0.3 [4368 B] Get: 160 http://deb.debian.org/debian bookworm/main amd64 libboost-program-options1.74.0 amd64 1.74.0+ds1-20 [328 kB] Get: 161 http://deb.debian.org/debian bookworm/main amd64 libboost-program-options1.74-dev amd64 1.74.0+ds1-20 [358 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 libboost-program-options-dev amd64 1.74.0.3 [4340 B] Get: 163 http://deb.debian.org/debian bookworm/main amd64 libboost-system-dev amd64 1.74.0.3 [4468 B] Get: 164 http://deb.debian.org/debian bookworm/main amd64 libboost-test1.74.0 amd64 1.74.0+ds1-20 [453 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 libboost-test1.74-dev amd64 1.74.0+ds1-20 [526 kB] Get: 166 http://deb.debian.org/debian bookworm/main amd64 libboost-test-dev amd64 1.74.0.3 [4368 B] Get: 167 http://deb.debian.org/debian bookworm/main amd64 libboost-thread1.74.0 amd64 1.74.0+ds1-20 [257 kB] Get: 168 http://deb.debian.org/debian bookworm/main amd64 libboost-thread1.74-dev amd64 1.74.0+ds1-20 [266 kB] Get: 169 http://deb.debian.org/debian bookworm/main amd64 libboost-thread-dev amd64 1.74.0.3 [4356 B] Get: 170 http://deb.debian.org/debian bookworm/main amd64 libboost-timer1.74.0 amd64 1.74.0+ds1-20 [226 kB] Get: 171 http://deb.debian.org/debian bookworm/main amd64 libboost-timer1.74-dev amd64 1.74.0+ds1-20 [229 kB] Get: 172 http://deb.debian.org/debian bookworm/main amd64 libboost-timer-dev amd64 1.74.0.3 [4456 B] Get: 173 http://deb.debian.org/debian bookworm/main amd64 libgmpxx4ldbl amd64 2:6.2.1+dfsg1-1.1 [338 kB] Get: 174 http://deb.debian.org/debian bookworm/main amd64 libgmp-dev amd64 2:6.2.1+dfsg1-1.1 [641 kB] Get: 175 http://deb.debian.org/debian bookworm/main amd64 libmpfr-dev amd64 4.2.0-1 [259 kB] Get: 176 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 177 http://deb.debian.org/debian bookworm/main amd64 libcgal-dev amd64 5.5.1-2 [4866 kB] Get: 178 http://deb.debian.org/debian bookworm/main amd64 shared-mime-info amd64 2.2-1 [729 kB] Get: 179 http://deb.debian.org/debian bookworm/main amd64 libdouble-conversion3 amd64 3.2.1-1 [41.5 kB] Get: 180 http://deb.debian.org/debian bookworm/main amd64 libpcre2-16-0 amd64 10.42-1 [245 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 libqt5core5a amd64 5.15.8+dfsg-3 [1808 kB] Get: 182 http://deb.debian.org/debian bookworm/main amd64 libdrm-common all 2.4.114-1 [7112 B] Get: 183 http://deb.debian.org/debian bookworm/main amd64 libdrm2 amd64 2.4.114-1+b1 [37.5 kB] Get: 184 http://deb.debian.org/debian bookworm/main amd64 libglvnd0 amd64 1.6.0-1 [51.8 kB] Get: 185 http://deb.debian.org/debian bookworm/main amd64 libwayland-server0 amd64 1.21.0-1 [35.9 kB] Get: 186 http://deb.debian.org/debian bookworm/main amd64 libgbm1 amd64 22.3.6-1+deb12u1 [38.0 kB] Get: 187 http://deb.debian.org/debian bookworm/main amd64 libglapi-mesa amd64 22.3.6-1+deb12u1 [35.7 kB] Get: 188 http://deb.debian.org/debian bookworm/main amd64 libwayland-client0 amd64 1.21.0-1 [28.3 kB] Get: 189 http://deb.debian.org/debian bookworm/main amd64 libx11-xcb1 amd64 2:1.8.4-2 [192 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get: 191 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get: 192 http://deb.debian.org/debian bookworm/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get: 193 http://deb.debian.org/debian bookworm/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get: 194 http://deb.debian.org/debian bookworm/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get: 195 http://deb.debian.org/debian bookworm/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get: 196 http://deb.debian.org/debian bookworm/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get: 197 http://deb.debian.org/debian bookworm/main amd64 libegl-mesa0 amd64 22.3.6-1+deb12u1 [114 kB] Get: 198 http://deb.debian.org/debian bookworm/main amd64 libegl1 amd64 1.6.0-1 [33.7 kB] Get: 199 http://deb.debian.org/debian bookworm/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get: 200 http://deb.debian.org/debian bookworm/main amd64 libxfixes3 amd64 1:6.0.0-2 [22.7 kB] Get: 201 http://deb.debian.org/debian bookworm/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get: 202 http://deb.debian.org/debian bookworm/main amd64 libdrm-amdgpu1 amd64 2.4.114-1+b1 [20.9 kB] Get: 203 http://deb.debian.org/debian bookworm/main amd64 libpciaccess0 amd64 0.17-2 [51.4 kB] Get: 204 http://deb.debian.org/debian bookworm/main amd64 libdrm-intel1 amd64 2.4.114-1+b1 [64.0 kB] Get: 205 http://deb.debian.org/debian bookworm/main amd64 libdrm-nouveau2 amd64 2.4.114-1+b1 [19.1 kB] Get: 206 http://deb.debian.org/debian bookworm/main amd64 libdrm-radeon1 amd64 2.4.114-1+b1 [21.8 kB] Get: 207 http://deb.debian.org/debian bookworm/main amd64 libllvm15 amd64 1:15.0.6-4+b1 [23.1 MB] Get: 208 http://deb.debian.org/debian bookworm/main amd64 libsensors-config all 1:3.6.0-7.1 [14.3 kB] Get: 209 http://deb.debian.org/debian bookworm/main amd64 libsensors5 amd64 1:3.6.0-7.1 [34.2 kB] Get: 210 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dri amd64 22.3.6-1+deb12u1 [7239 kB] Get: 211 http://deb.debian.org/debian bookworm/main amd64 libglx-mesa0 amd64 22.3.6-1+deb12u1 [147 kB] Get: 212 http://deb.debian.org/debian bookworm/main amd64 libglx0 amd64 1.6.0-1 [34.4 kB] Get: 213 http://deb.debian.org/debian bookworm/main amd64 libgl1 amd64 1.6.0-1 [88.4 kB] Get: 214 http://deb.debian.org/debian bookworm/main amd64 libevdev2 amd64 1.13.0+dfsg-1 [34.0 kB] Get: 215 http://deb.debian.org/debian bookworm/main amd64 libmtdev1 amd64 1.1.6-1 [23.0 kB] Get: 216 http://deb.debian.org/debian bookworm/main amd64 libgudev-1.0-0 amd64 237-2 [15.1 kB] Get: 217 http://deb.debian.org/debian bookworm/main amd64 libwacom-common all 2.6.0-1 [58.4 kB] Get: 218 http://deb.debian.org/debian bookworm/main amd64 libwacom9 amd64 2.6.0-1 [21.5 kB] Get: 219 http://deb.debian.org/debian bookworm/main amd64 libinput-bin amd64 1.22.1-1 [23.2 kB] Get: 220 http://deb.debian.org/debian bookworm/main amd64 libinput10 amd64 1.22.1-1 [125 kB] Get: 221 http://deb.debian.org/debian bookworm/main amd64 libmd4c0 amd64 0.4.8-1 [44.2 kB] Get: 222 http://deb.debian.org/debian bookworm/main amd64 libqt5dbus5 amd64 5.15.8+dfsg-3 [211 kB] Get: 223 http://deb.debian.org/debian bookworm/main amd64 libqt5network5 amd64 5.15.8+dfsg-3 [674 kB] Get: 224 http://deb.debian.org/debian bookworm/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get: 225 http://deb.debian.org/debian bookworm/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get: 226 http://deb.debian.org/debian bookworm/main amd64 libxcb-image0 amd64 0.4.0-2 [22.9 kB] Get: 227 http://deb.debian.org/debian bookworm/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get: 228 http://deb.debian.org/debian bookworm/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get: 229 http://deb.debian.org/debian bookworm/main amd64 libxcb-shape0 amd64 1.15-1 [106 kB] Get: 230 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinerama0 amd64 1.15-1 [105 kB] Get: 231 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinput0 amd64 1.15-1 [130 kB] Get: 232 http://deb.debian.org/debian bookworm/main amd64 libxcb-xkb1 amd64 1.15-1 [129 kB] Get: 233 http://deb.debian.org/debian bookworm/main amd64 xkb-data all 2.35.1-1 [764 kB] Get: 234 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon0 amd64 1.5.0-1 [106 kB] Get: 235 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon-x11-0 amd64 1.5.0-1 [15.6 kB] Get: 236 http://deb.debian.org/debian bookworm/main amd64 libqt5gui5 amd64 5.15.8+dfsg-3 [3405 kB] Get: 237 http://deb.debian.org/debian bookworm/main amd64 libqt5widgets5 amd64 5.15.8+dfsg-3 [2381 kB] Get: 238 http://deb.debian.org/debian bookworm/main amd64 libqt5opengl5 amd64 5.15.8+dfsg-3 [147 kB] Get: 239 http://deb.debian.org/debian bookworm/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 240 http://deb.debian.org/debian bookworm/main amd64 x11proto-dev all 2022.1-1 [599 kB] Get: 241 http://deb.debian.org/debian bookworm/main amd64 libxau-dev amd64 1:1.0.9-1 [22.9 kB] Get: 242 http://deb.debian.org/debian bookworm/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get: 243 http://deb.debian.org/debian bookworm/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 244 http://deb.debian.org/debian bookworm/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get: 245 http://deb.debian.org/debian bookworm/main amd64 libxcb1-dev amd64 1.15-1 [181 kB] Get: 246 http://deb.debian.org/debian bookworm/main amd64 libx11-dev amd64 2:1.8.4-2 [836 kB] Get: 247 http://deb.debian.org/debian bookworm/main amd64 libglx-dev amd64 1.6.0-1 [15.3 kB] Get: 248 http://deb.debian.org/debian bookworm/main amd64 libgl-dev amd64 1.6.0-1 [100 kB] Get: 249 http://deb.debian.org/debian bookworm/main amd64 libegl-dev amd64 1.6.0-1 [19.1 kB] Get: 250 http://deb.debian.org/debian bookworm/main amd64 libopengl0 amd64 1.6.0-1 [30.6 kB] Get: 251 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa amd64 9.0.2-1.1 [178 kB] Get: 252 http://deb.debian.org/debian bookworm/main amd64 libopengl-dev amd64 1.6.0-1 [4936 B] Get: 253 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1 [216 kB] Get: 254 http://deb.debian.org/debian bookworm/main amd64 libqt5concurrent5 amd64 5.15.8+dfsg-3 [41.7 kB] Get: 255 http://deb.debian.org/debian bookworm/main amd64 libcups2 amd64 2.4.2-3 [244 kB] Get: 256 http://deb.debian.org/debian bookworm/main amd64 libqt5printsupport5 amd64 5.15.8+dfsg-3 [201 kB] Get: 257 http://deb.debian.org/debian bookworm/main amd64 libqt5sql5 amd64 5.15.8+dfsg-3 [121 kB] Get: 258 http://deb.debian.org/debian bookworm/main amd64 libqt5test5 amd64 5.15.8+dfsg-3 [145 kB] Get: 259 http://deb.debian.org/debian bookworm/main amd64 libqt5xml5 amd64 5.15.8+dfsg-3 [121 kB] Get: 260 http://deb.debian.org/debian bookworm/main amd64 libvulkan1 amd64 1.3.239.0-1 [116 kB] Get: 261 http://deb.debian.org/debian bookworm/main amd64 libvulkan-dev amd64 1.3.239.0-1 [1115 kB] Get: 262 http://deb.debian.org/debian bookworm/main amd64 libxext-dev amd64 2:1.3.4-1+b1 [107 kB] Get: 263 http://deb.debian.org/debian bookworm/main amd64 qt5-qmake-bin amd64 5.15.8+dfsg-3 [1023 kB] Get: 264 http://deb.debian.org/debian bookworm/main amd64 qtchooser amd64 66-2 [26.3 kB] Get: 265 http://deb.debian.org/debian bookworm/main amd64 qt5-qmake amd64 5.15.8+dfsg-3 [221 kB] Get: 266 http://deb.debian.org/debian bookworm/main amd64 qtbase5-dev-tools amd64 5.15.8+dfsg-3 [756 kB] Get: 267 http://deb.debian.org/debian bookworm/main amd64 qtbase5-dev amd64 5.15.8+dfsg-3 [1121 kB] Get: 268 http://deb.debian.org/debian bookworm/main amd64 libqt5opengl5-dev amd64 5.15.8+dfsg-3 [48.7 kB] Get: 269 http://deb.debian.org/debian bookworm/main amd64 libqt5svg5 amd64 5.15.8-2 [134 kB] Get: 270 http://deb.debian.org/debian bookworm/main amd64 libqt5svg5-dev amd64 5.15.8-2 [12.7 kB] Get: 271 http://deb.debian.org/debian bookworm/main amd64 libcgal-qt5-dev amd64 5.5.1-2 [134 kB] Get: 272 http://deb.debian.org/debian bookworm/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get: 273 http://deb.debian.org/debian bookworm/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get: 274 http://deb.debian.org/debian bookworm/main amd64 pkgconf amd64 1.8.1-1 [25.9 kB] Get: 275 http://deb.debian.org/debian bookworm/main amd64 pkg-config amd64 1.8.1-1 [13.7 kB] Get: 276 http://deb.debian.org/debian bookworm/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 277 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB] Get: 278 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 279 http://deb.debian.org/debian bookworm/main amd64 libphat-dev all 1.6-2 [16.3 kB] Get: 280 http://deb.debian.org/debian bookworm/main amd64 libhera-dev all 1.0.0+dfsg-1 [61.4 kB] Get: 281 http://deb.debian.org/debian bookworm/main amd64 libhwloc15 amd64 2.9.0-1 [154 kB] Get: 282 http://deb.debian.org/debian bookworm/main amd64 libice-dev amd64 2:1.0.10-1 [67.1 kB] Get: 283 http://deb.debian.org/debian bookworm/main amd64 libimagequant0 amd64 2.17.0-1 [32.5 kB] Get: 284 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 285 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 286 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 287 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 288 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB] Get: 289 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get: 290 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB] Get: 291 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get: 292 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB] Get: 293 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB] Get: 294 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB] Get: 295 http://deb.debian.org/debian bookworm/main amd64 libopenjp2-7 amd64 2.5.0-1+b1 [189 kB] Get: 296 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6 [1988 kB] Get: 297 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6 [4738 kB] Get: 298 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get: 299 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get: 300 http://deb.debian.org/debian bookworm/main amd64 libqglviewer2-qt5 amd64 2.8.0+dfsg1-2 [207 kB] Get: 301 http://deb.debian.org/debian bookworm/main amd64 libqglviewer-headers all 2.8.0+dfsg1-2 [50.1 kB] Get: 302 http://deb.debian.org/debian bookworm/main amd64 libsm-dev amd64 2:1.2.3-1 [38.0 kB] Get: 303 http://deb.debian.org/debian bookworm/main amd64 libxt-dev amd64 1:1.2.1-1.1 [405 kB] Get: 304 http://deb.debian.org/debian bookworm/main amd64 libxmu-headers all 2:1.1.3-3 [68.5 kB] Get: 305 http://deb.debian.org/debian bookworm/main amd64 libxmu-dev amd64 2:1.1.3-3 [65.9 kB] Get: 306 http://deb.debian.org/debian bookworm/main amd64 libqglviewer-dev-qt5 amd64 2.8.0+dfsg1-2 [5164 B] Get: 307 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get: 308 http://deb.debian.org/debian bookworm/main amd64 libraqm0 amd64 0.7.0-4.1 [10.6 kB] Get: 309 http://deb.debian.org/debian bookworm/main amd64 libtbbmalloc2 amd64 2021.8.0-1 [46.1 kB] Get: 310 http://deb.debian.org/debian bookworm/main amd64 libtbbbind-2-5 amd64 2021.8.0-1 [13.3 kB] Get: 311 http://deb.debian.org/debian bookworm/main amd64 libtbb12 amd64 2021.8.0-1 [79.0 kB] Get: 312 http://deb.debian.org/debian bookworm/main amd64 libtbb-dev amd64 2021.8.0-1 [191 kB] Get: 313 http://deb.debian.org/debian bookworm/main amd64 libwebpdemux2 amd64 1.2.4-0.1 [99.2 kB] Get: 314 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.4-0.1 [109 kB] Get: 315 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get: 316 http://deb.debian.org/debian bookworm/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get: 317 http://deb.debian.org/debian bookworm/main amd64 pybind11-dev all 2.10.3-1 [186 kB] Get: 318 http://deb.debian.org/debian bookworm/main amd64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get: 319 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get: 320 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6 [615 kB] Get: 321 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get: 322 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get: 323 http://deb.debian.org/debian bookworm/main amd64 python3-appdirs all 1.4.4-3 [13.0 kB] Get: 324 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.2.0-1 [65.4 kB] Get: 325 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get: 326 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B] Get: 327 http://deb.debian.org/debian bookworm/main amd64 python3-brotli amd64 1.0.9-2+b6 [281 kB] Get: 328 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 329 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB] Get: 330 http://deb.debian.org/debian bookworm/main amd64 python3-contourpy amd64 1.0.7-1+b1 [176 kB] Get: 331 http://deb.debian.org/debian bookworm/main amd64 python3-cycler all 0.11.0-1 [8020 B] Get: 332 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get: 333 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB] Get: 334 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB] Get: 335 http://deb.debian.org/debian bookworm/main amd64 python3-typing-extensions all 4.4.0-1 [45.2 kB] Get: 336 http://deb.debian.org/debian bookworm/main amd64 python3-eagerpy all 0.30.0-3 [18.8 kB] Get: 337 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get: 338 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get: 339 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB] Get: 340 http://deb.debian.org/debian bookworm/main amd64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB] Get: 341 http://deb.debian.org/debian bookworm/main amd64 python3-mpmath all 1.2.1-2 [418 kB] Get: 342 http://deb.debian.org/debian bookworm/main amd64 python3-sympy all 1.11.1-1 [4358 kB] Get: 343 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-3 [30.1 kB] Get: 344 http://deb.debian.org/debian bookworm/main amd64 python3-fs all 2.4.16-2 [95.2 kB] Get: 345 http://deb.debian.org/debian bookworm/main amd64 python3-lxml amd64 4.9.2-1+b1 [1194 kB] Get: 346 http://deb.debian.org/debian bookworm/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b2 [25.0 kB] Get: 347 http://deb.debian.org/debian bookworm/main amd64 unicode-data all 15.0.0-1 [7984 kB] Get: 348 http://deb.debian.org/debian bookworm/main amd64 python3-fonttools amd64 4.38.0-1+b1 [1012 kB] Get: 349 http://deb.debian.org/debian bookworm/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 350 http://deb.debian.org/debian bookworm/main amd64 python3-joblib all 1.2.0-4 [211 kB] Get: 351 http://deb.debian.org/debian bookworm/main amd64 python3-kiwisolver amd64 1.4.4-1+b1 [60.1 kB] Get: 352 http://deb.debian.org/debian bookworm/main amd64 python3-pil amd64 9.4.0-1.1+b1 [472 kB] Get: 353 http://deb.debian.org/debian bookworm/main amd64 python3-tk amd64 3.11.2-2 [98.2 kB] Get: 354 http://deb.debian.org/debian bookworm/main amd64 python3-pil.imagetk amd64 9.4.0-1.1+b1 [74.4 kB] Get: 355 http://deb.debian.org/debian bookworm/main amd64 python3-pyparsing all 3.0.9-1 [138 kB] Get: 356 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 23.0-1 [32.5 kB] Get: 357 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib amd64 3.6.3-1+b1 [6921 kB] Get: 358 http://deb.debian.org/debian bookworm/main amd64 python3-more-itertools all 8.10.0-2 [53.0 kB] Get: 359 http://deb.debian.org/debian bookworm/main amd64 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get: 360 http://deb.debian.org/debian bookworm/main amd64 python3-pot amd64 0.8.2+dfsg-1+b3 [155 kB] Get: 361 http://deb.debian.org/debian bookworm/main amd64 python3-py all 1.11.0-1 [89.2 kB] Get: 362 http://deb.debian.org/debian bookworm/main amd64 python3-pybind11 all 2.10.3-1 [199 kB] Get: 363 http://deb.debian.org/debian bookworm/main amd64 python3-pytest all 7.2.1-2 [236 kB] Get: 364 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Get: 365 http://deb.debian.org/debian bookworm/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 366 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn-lib amd64 1.2.1+dfsg-1 [2567 kB] Get: 367 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn all 1.2.1+dfsg-1 [2103 kB] Fetched 271 MB in 3s (89.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. 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Setting up libboost-atomic1.74.0:amd64 (1.74.0+ds1-20) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libdatrie1:amd64 (0.2.13-2+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.74.6-1) ... No schema files found: doing nothing. Setting up libglvnd0:amd64 (1.6.0-1) ... Setting up libboost-program-options1.74.0:amd64 (1.74.0+ds1-20) ... Setting up fonts-lyx (2.3.7-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libboost-chrono1.74-dev:amd64 (1.74.0+ds1-20) ... Setting up liblab-gamut1:amd64 (2.42.2-7+b3) ... Setting up libqglviewer-headers (2.8.0+dfsg1-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-7.1) ... Setting up libnghttp2-14:amd64 (1.52.0-1) ... 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Setting up libz3-4:amd64 (4.8.12-3.1) ... Setting up libblas3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpkgconf3:amd64 (1.8.1-1) ... Setting up libgmpxx4ldbl:amd64 (2:6.2.1+dfsg1-1.1) ... Setting up libuv1:amd64 (1.44.2-1) ... Setting up libexpat1-dev:amd64 (2.5.0-1) ... Setting up libboost-test1.74.0:amd64 (1.74.0+ds1-20) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up qt5-qmake-bin (5.15.8+dfsg-3) ... Setting up libboost-program-options-dev:amd64 (1.74.0.3) ... Setting up libx11-data (2:1.8.4-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libpathplan4:amd64 (2.42.2-7+b3) ... Setting up libavahi-common-data:amd64 (0.8-9) ... Setting up libboost-system1.74-dev:amd64 (1.74.0+ds1-20) ... Setting up libann0 (1.1.2+doc-9+b1) ... Setting up libdbus-1-3:amd64 (1.14.6-1) ... 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Setting up libboost-serialization1.74.0:amd64 (1.74.0+ds1-20) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up libnuma1:amd64 (2.0.16-1) ... Setting up libphat-dev (1.6-2) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up librhash0:amd64 (1.4.3-3) ... Setting up libtiff6:amd64 (4.5.0-5) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libmd4c0:amd64 (0.4.8-1) ... Setting up libopenjp2-7:amd64 (2.5.0-1+b1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libthai-data (0.1.29-1) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up cmake-data (3.25.1-1) ... Setting up libcdt5:amd64 (2.42.2-7+b3) ... Setting up libcgraph6:amd64 (2.42.2-7+b3) ... Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1) ... Setting up libboost-filesystem1.74-dev:amd64 (1.74.0+ds1-20) ... Setting up libopengl-dev:amd64 (1.6.0-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libboost-date-time1.74.0:amd64 (1.74.0+ds1-20) ... Setting up libde265-0:amd64 (1.0.11-1) ... Setting up libboost-test1.74-dev:amd64 (1.74.0+ds1-20) ... Setting up python-matplotlib-data (3.6.3-1) ... Setting up libwebpmux3:amd64 (1.2.4-0.1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up libdrm-common (2.4.114-1) ... Setting up libyuv0:amd64 (0.0~git20230123.b2528b0-1) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libevdev2:amd64 (1.13.0+dfsg-1) ... Setting up readline-common (8.2-1.3) ... Setting up libboost-timer1.74.0:amd64 (1.74.0+ds1-20) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b3) ... Setting up libboost-filesystem-dev:amd64 (1.74.0.3) ... Setting up libgudev-1.0-0:amd64 (237-2) ... Setting up qtchooser (66-2) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libboost-thread1.74.0:amd64 (1.74.0+ds1-20) ... Setting up libwacom-common (2.6.0-1) ... Setting up libxkbcommon0:amd64 (1.5.0-1) ... Setting up libwayland-client0:amd64 (1.21.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2022.1-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up libhera-dev (1.0.0+dfsg-1) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libgmp-dev:amd64 (2:6.2.1+dfsg1-1.1) ... Setting up libxcb-xfixes0:amd64 (1.15-1) ... Setting up libxau-dev:amd64 (1:1.0.9-1) ... Setting up libavif15:amd64 (0.11.1-1) ... Setting up qt5-qmake:amd64 (5.15.8+dfsg-3) ... Setting up libxcb-xinput0:amd64 (1.15-1) ... Setting up libice-dev:amd64 (2:1.0.10-1) ... Setting up libtool (2.4.7-5) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/gudhi-3.7.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gudhi_3.7.1+dfsg-1_source.changes dpkg-buildpackage: info: source package gudhi dpkg-buildpackage: info: source version 3.7.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Gard Spreemann dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake --no-parallel --with=python3 debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' rm -rf build for py3ver in 3.11 ; do \ rm -rf build-py$py3ver ; \ done make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' dh_auto_clean -O--buildsystem=cmake -O--no-parallel dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel dh_clean -O--buildsystem=cmake -O--no-parallel debian/rules binary dh binary --buildsystem=cmake --no-parallel --with=python3 dh_update_autotools_config -O--buildsystem=cmake -O--no-parallel dh_autoreconf -O--buildsystem=cmake -O--no-parallel debian/rules execute_before_dh_auto_configure make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_auto_configure --buildsystem=cmake --no-parallel --builddirectory=build -- -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=false -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DWITH_GUDHI_REMOTE_TEST=false -DUSER_VERSION_DIR=userversion -DHERA_INCLUDE_DIR=/usr/include/hera cd build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=false -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DWITH_GUDHI_REMOTE_TEST=false -DUSER_VERSION_DIR=userversion -DHERA_INCLUDE_DIR=/usr/include/hera .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- GUDHI version : 3.7.1 -- boost include dirs:/usr/include -- boost library dirs:/usr/lib/x86_64-linux-gnu -- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so -- Found GMPXX: /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Using header-only CGAL -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Found MPFR: /usr/lib/x86_64-linux-gnu/libmpfr.so -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.66") -- Boost include dirs: /usr/include -- Boost libraries: -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Using gcc version 4 or later. Adding -frounding-math -- CGAL version: 5.5.1. -- Build type: None -- USING CXXFLAGS = '-g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now ' -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.4.0", minimum required is "3.1.0") gprof found in /usr/bin/gprof diff found in /usr/bin/diff -- Checking to see if CXX compiler accepts flag -Wall -- Checking to see if CXX compiler accepts flag -Wall - yes ++ Release compilation flags are: -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -O3 -DNDEBUG ++ GUDHI_SUB_DIRECTORIES list is:";benchmark;example;test;utilities" CMake Warning (dev) at /usr/share/cmake-3.25/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): src/GudhUI/CMakeLists.txt:4 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. ++ Python module will not be compiled because WITH_GUDHI_PYTHON is set to OFF ++ Project = GUDHIdev ++ Doxygen version 1.9.4 ++ GUDHI_MODULES list is:"common;Alpha_complex;Bitmap_cubical_complex;Bottleneck_distance;Collapse;Contraction;Coxeter_triangulation;Cech_complex;Hasse_complex;Persistence_representations;Persistent_cohomology;Rips_complex;Simplex_tree;Skeleton_blocker;Spatial_searching;Subsampling;Tangential_complex;Toplex_map;Witness_complex;Nerve_GIC;GudhUI;cpp-documentation" ++ GUDHI_MISSING_MODULES list is:"python" -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/gudhi-3.7.1+dfsg/build make -C build user_version make[2]: Entering directory '/build/gudhi-3.7.1+dfsg/build' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg -B/build/gudhi-3.7.1+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 user_version make[3]: Entering directory '/build/gudhi-3.7.1+dfsg/build' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg -B/build/gudhi-3.7.1+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 CMakeFiles/user_version.dir/all make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build' make -f CMakeFiles/user_version.dir/build.make CMakeFiles/user_version.dir/depend make[5]: Entering directory '/build/gudhi-3.7.1+dfsg/build' cd /build/gudhi-3.7.1+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg /build/gudhi-3.7.1+dfsg /build/gudhi-3.7.1+dfsg/build /build/gudhi-3.7.1+dfsg/build /build/gudhi-3.7.1+dfsg/build/CMakeFiles/user_version.dir/DependInfo.cmake --color= 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/build/gudhi-3.7.1+dfsg/src/Nerve_GIC/include/gudhi/GIC.h /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/GIC.h make[5]: Leaving directory '/build/gudhi-3.7.1+dfsg/build' Built target user_version make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build/CMakeFiles 0 make[3]: Leaving directory '/build/gudhi-3.7.1+dfsg/build' make[2]: Leaving directory '/build/gudhi-3.7.1+dfsg/build' for py3ver in 3.11 ; do \ dh_auto_configure --buildsystem=cmake --no-parallel --builddirectory=build-py$py3ver -- -DWITH_GUDHI_BENCHMARK=false -DWITH_GUDHI_EXAMPLE=false -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=false -DWITH_GUDHI_REMOTE_TEST=false -DPython_ADDITIONAL_VERSIONS=$py3ver -DUSER_VERSION_DIR=userversion -DWITH_GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS=false -DHERA_INCLUDE_DIR=/usr/include/hera ; \ make -C build-py$py3ver user_version ; \ done cd build-py3.11 && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DWITH_GUDHI_BENCHMARK=false -DWITH_GUDHI_EXAMPLE=false -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=false -DWITH_GUDHI_REMOTE_TEST=false -DPython_ADDITIONAL_VERSIONS=3.11 -DUSER_VERSION_DIR=userversion -DWITH_GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS=false -DHERA_INCLUDE_DIR=/usr/include/hera .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- GUDHI version : 3.7.1 -- boost include dirs:/usr/include -- boost library dirs:/usr/lib/x86_64-linux-gnu -- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so -- Found GMPXX: /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Using header-only CGAL -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Found MPFR: /usr/lib/x86_64-linux-gnu/libmpfr.so -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.66") -- Boost include dirs: /usr/include -- Boost libraries: -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Using gcc version 4 or later. Adding -frounding-math -- CGAL version: 5.5.1. -- Build type: None -- USING CXXFLAGS = '-g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now ' -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.4.0", minimum required is "3.1.0") gprof found in /usr/bin/gprof diff found in /usr/bin/diff -- Found PythonInterp: /usr/bin/python3.11 (found version "3.11.2") ++ Python module cython - Version 0.29.32 found ++ Python module pytest - Version 7.2.1 found ++ Python module matplotlib - Version 3.6.3 found ++ Python module numpy - Version 1.24.2 found ++ Python module scipy - Version 1.10.1 found ++ Python module sklearn - Version 1.2.1 found ++ Python module ot - Version 0.8.2 found ++ Python module pybind11 - Version 2.10.3 found PYTHON_MODULE_NAME = torch - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'torch' PYTHON_MODULE_NAME = pykeops - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'pykeops' ++ Python module eagerpy - Version 0.30.0 found PYTHON_MODULE_NAME = hnswlib - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'hnswlib' PYTHON_MODULE_NAME = tensorflow - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'tensorflow' PYTHON_MODULE_NAME = sphinx_paramlinks - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'sphinx_paramlinks' PYTHON_MODULE_NAME = python_docs_theme - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'python_docs_theme' -- Checking to see if CXX compiler accepts flag -Wall -- Checking to see if CXX compiler accepts flag -Wall - yes ++ Release compilation flags are: -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -O3 -DNDEBUG ++ GUDHI_SUB_DIRECTORIES list is:";test" CMake Warning (dev) at /usr/share/cmake-3.25/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): src/GudhUI/CMakeLists.txt:4 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. ++ /usr/lib/x86_64-linux-gnu/libgmp.so => UNIX_LIB_FILE_NAME = gmp ** Add gmp /usr/lib/x86_64-linux-gnu ++ /usr/lib/x86_64-linux-gnu/libgmpxx.so => UNIX_LIB_FILE_NAME = gmpxx ** Add gmpxx /usr/lib/x86_64-linux-gnu ++ /usr/lib/x86_64-linux-gnu/libmpfr.so => UNIX_LIB_FILE_NAME = mpfr ** Add mpfr /usr/lib/x86_64-linux-gnu ++ Python documentation module will not be compiled because sphinx and sphinxcontrib-bibtex were not found ++ Project = GUDHIdev ++ Doxygen version 1.9.4 ++ GUDHI_MODULES list is:"common;Alpha_complex;Bitmap_cubical_complex;Bottleneck_distance;Collapse;Contraction;Coxeter_triangulation;Cech_complex;Hasse_complex;Persistence_representations;Persistent_cohomology;Rips_complex;Simplex_tree;Skeleton_blocker;Spatial_searching;Subsampling;Tangential_complex;Toplex_map;Witness_complex;Nerve_GIC;GudhUI;python;cpp-documentation" ++ GUDHI_MISSING_MODULES list is:"python-documentation" -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/gudhi-3.7.1+dfsg/build-py3.11 make[2]: Entering directory '/build/gudhi-3.7.1+dfsg/build-py3.11' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg -B/build/gudhi-3.7.1+dfsg/build-py3.11 --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 user_version make[3]: Entering directory '/build/gudhi-3.7.1+dfsg/build-py3.11' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg -B/build/gudhi-3.7.1+dfsg/build-py3.11 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build-py3.11/CMakeFiles 0 make -f CMakeFiles/Makefile2 CMakeFiles/user_version.dir/all make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build-py3.11' make -f 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/build/gudhi-3.7.1+dfsg/build-py3.11/CMakeFiles 0 make[3]: Leaving directory '/build/gudhi-3.7.1+dfsg/build-py3.11' make[2]: Leaving directory '/build/gudhi-3.7.1+dfsg/build-py3.11' make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_auto_configure --buildsystem=cmake --no-parallel --sourcedir=build/userversion --builddirectory=build/userversion/build -- -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=false -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DWITH_GUDHI_REMOTE_TEST=false -DHERA_INCLUDE_DIR=/usr/include/hera cd build/userversion/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=false -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DWITH_GUDHI_REMOTE_TEST=false -DHERA_INCLUDE_DIR=/usr/include/hera .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- GUDHI version : 3.7.1 -- boost include dirs:/usr/include -- boost library dirs:/usr/lib/x86_64-linux-gnu -- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so -- Found GMPXX: /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Using header-only CGAL -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Found MPFR: /usr/lib/x86_64-linux-gnu/libmpfr.so -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.66") -- Boost include dirs: /usr/include -- Boost libraries: -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Using gcc version 4 or later. Adding -frounding-math -- CGAL version: 5.5.1. -- Build type: None -- USING CXXFLAGS = '-g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now ' -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.4.0", minimum required is "3.1.0") gprof found in /usr/bin/gprof diff found in /usr/bin/diff -- Checking to see if CXX compiler accepts flag -Wall -- Checking to see if CXX compiler accepts flag -Wall - yes ++ Release compilation flags are: -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -DNDEBUG ++ GUDHI_SUB_DIRECTORIES list is:";benchmark;example;test;utilities" ++ Project = GUDHI ++ Doxygen version 1.9.4 ++ Python module will not be compiled because WITH_GUDHI_PYTHON is set to OFF CMake Warning (dev) at /usr/share/cmake-3.25/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): GudhUI/CMakeLists.txt:4 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. ++ GUDHI_MODULES list is:"common;Alpha_complex;Bitmap_cubical_complex;Bottleneck_distance;Cech_complex;Contraction;Collapse;Coxeter_triangulation;Hasse_complex;Persistence_representations;Persistent_cohomology;Rips_complex;Simplex_tree;Skeleton_blocker;Spatial_searching;Subsampling;Tangential_complex;Toplex_map;Witness_complex;Nerve_GIC;cpp-documentation;GudhUI" ++ GUDHI_MISSING_MODULES list is:"python" ++ make install will install GUDHI in the following directory : /usr -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/gudhi-3.7.1+dfsg/build/userversion/build for py3ver in 3.11 ; do \ dh_auto_configure --buildsystem=cmake --no-parallel --sourcedir=build-py$py3ver/userversion --builddirectory=build-py$py3ver/userversion/build -- -DWITH_GUDHI_BENCHMARK=false -DWITH_GUDHI_EXAMPLE=false -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=false -DWITH_GUDHI_REMOTE_TEST=false -DPython_ADDITIONAL_VERSIONS=$py3ver -DWITH_GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS=false -DHERA_INCLUDE_DIR=/usr/include/hera ; \ done cd build-py3.11/userversion/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DWITH_GUDHI_BENCHMARK=false -DWITH_GUDHI_EXAMPLE=false -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=false -DWITH_GUDHI_REMOTE_TEST=false -DPython_ADDITIONAL_VERSIONS=3.11 -DWITH_GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS=false -DHERA_INCLUDE_DIR=/usr/include/hera .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- GUDHI version : 3.7.1 -- boost include dirs:/usr/include -- boost library dirs:/usr/lib/x86_64-linux-gnu -- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so -- Found GMPXX: /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Using header-only CGAL -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Found MPFR: /usr/lib/x86_64-linux-gnu/libmpfr.so -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.66") -- Boost include dirs: /usr/include -- Boost libraries: -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Using gcc version 4 or later. Adding -frounding-math -- CGAL version: 5.5.1. -- Build type: None -- USING CXXFLAGS = '-g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now ' -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.4.0", minimum required is "3.1.0") gprof found in /usr/bin/gprof diff found in /usr/bin/diff -- Found PythonInterp: /usr/bin/python3.11 (found version "3.11.2") ++ Python module cython - Version 0.29.32 found ++ Python module pytest - Version 7.2.1 found ++ Python module matplotlib - Version 3.6.3 found ++ Python module numpy - Version 1.24.2 found ++ Python module scipy - Version 1.10.1 found ++ Python module sklearn - Version 1.2.1 found ++ Python module ot - Version 0.8.2 found ++ Python module pybind11 - Version 2.10.3 found PYTHON_MODULE_NAME = torch - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'torch' PYTHON_MODULE_NAME = pykeops - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'pykeops' ++ Python module eagerpy - Version 0.30.0 found PYTHON_MODULE_NAME = hnswlib - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'hnswlib' PYTHON_MODULE_NAME = tensorflow - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'tensorflow' PYTHON_MODULE_NAME = sphinx_paramlinks - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_VERSION = - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'sphinx_paramlinks' PYTHON_MODULE_NAME = python_docs_theme - PYTHON_MODULE_RESULT = 1 - PYTHON_MODULE_ERROR = Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'python_docs_theme' -- Checking to see if CXX compiler accepts flag -Wall -- Checking to see if CXX compiler accepts flag -Wall - yes ++ Release compilation flags are: -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -DNDEBUG ++ GUDHI_SUB_DIRECTORIES list is:";test" ++ Project = GUDHI ++ Doxygen version 1.9.4 ++ /usr/lib/x86_64-linux-gnu/libgmp.so => UNIX_LIB_FILE_NAME = gmp ** Add gmp /usr/lib/x86_64-linux-gnu ++ /usr/lib/x86_64-linux-gnu/libgmpxx.so => UNIX_LIB_FILE_NAME = gmpxx ** Add gmpxx /usr/lib/x86_64-linux-gnu ++ /usr/lib/x86_64-linux-gnu/libmpfr.so => UNIX_LIB_FILE_NAME = mpfr ** Add mpfr /usr/lib/x86_64-linux-gnu ++ Python documentation module will not be compiled because sphinx and sphinxcontrib-bibtex were not found CMake Warning (dev) at /usr/share/cmake-3.25/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): GudhUI/CMakeLists.txt:4 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. ++ GUDHI_MODULES list is:"common;Alpha_complex;Bitmap_cubical_complex;Bottleneck_distance;Cech_complex;Contraction;Collapse;Coxeter_triangulation;Hasse_complex;Persistence_representations;Persistent_cohomology;Rips_complex;Simplex_tree;Skeleton_blocker;Spatial_searching;Subsampling;Tangential_complex;Toplex_map;Witness_complex;Nerve_GIC;cpp-documentation;python;GudhUI" ++ GUDHI_MISSING_MODULES list is:"python-documentation" ++ make install will install GUDHI in the following directory : /usr -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_auto_build --buildsystem=cmake --no-parallel --sourcedir=build/userversion --builddirectory=build/userversion/build cd build/userversion/build && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg/build/userversion -B/build/gudhi-3.7.1+dfsg/build/userversion/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build/userversion/build/CMakeFiles /build/gudhi-3.7.1+dfsg/build/userversion/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/common /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 0%] Building CXX object example/common/CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/common/CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -MF CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o.d -o CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/common/example_vector_double_points_off_reader.cpp [ 1%] Linking CXX executable vector_double_off_reader cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/vector_double_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -o vector_double_off_reader /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 1%] Built target vector_double_off_reader make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/common /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/CMakeFiles/cgal_3D_off_reader.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 1%] Building CXX object example/common/CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/common/CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -MF CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o.d -o CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/common/example_CGAL_3D_points_off_reader.cpp [ 2%] Linking CXX executable cgal_3D_off_reader cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgal_3D_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -o cgal_3D_off_reader /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 2%] Built target cgal_3D_off_reader make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/common /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 2%] Building CXX object example/common/CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/common/CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -MF CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o.d -o CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/common/example_CGAL_points_off_reader.cpp [ 3%] Linking CXX executable cgal_off_reader cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgal_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -o cgal_off_reader /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 3%] Built target cgal_off_reader make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/common /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 4%] Building CXX object utilities/common/CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/common/CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -MF CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o.d -o CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/common/off_file_from_shape_generator.cpp [ 4%] Linking CXX executable off_file_from_shape_generator cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/off_file_from_shape_generator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -o off_file_from_shape_generator /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 4%] Built target off_file_from_shape_generator make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 5%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -MF CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o.d -o CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Alpha_complex_from_points.cpp [ 5%] Linking CXX executable Alpha_complex_example_from_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -o Alpha_complex_example_from_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 5%] Built target Alpha_complex_example_from_points make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 6%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -MF CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o.d -o CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Alpha_complex_from_off.cpp [ 6%] Linking CXX executable Alpha_complex_example_from_off cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -o Alpha_complex_example_from_off /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 6%] Built target Alpha_complex_example_from_off make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 7%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/Fast_alpha_complex_from_off.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Alpha_complex/CMakeFiles/Alpha_complex_example_fast_from_off.dir/Fast_alpha_complex_from_off.cpp.o -MF CMakeFiles/Alpha_complex_example_fast_from_off.dir/Fast_alpha_complex_from_off.cpp.o.d -o CMakeFiles/Alpha_complex_example_fast_from_off.dir/Fast_alpha_complex_from_off.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Fast_alpha_complex_from_off.cpp [ 7%] Linking CXX executable Alpha_complex_example_fast_from_off cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_fast_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Alpha_complex_example_fast_from_off.dir/Fast_alpha_complex_from_off.cpp.o -o Alpha_complex_example_fast_from_off /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 7%] Built target Alpha_complex_example_fast_from_off make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 7%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/Weighted_alpha_complex_3d_from_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Alpha_complex/CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/Weighted_alpha_complex_3d_from_points.cpp.o -MF CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/Weighted_alpha_complex_3d_from_points.cpp.o.d -o CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/Weighted_alpha_complex_3d_from_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Weighted_alpha_complex_3d_from_points.cpp In file included from /usr/include/boost/tuple/tuple.hpp:28, from /usr/include/boost/fusion/adapted/boost_tuple/boost_tuple_iterator.hpp:21, from /usr/include/boost/fusion/adapted/boost_tuple/detail/begin_impl.hpp:11, from /usr/include/boost/fusion/adapted/boost_tuple.hpp:15, from /usr/include/boost/iterator/zip_iterator.hpp:20, from /usr/include/boost/range/combine.hpp:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Alpha_complex_3d.h:17, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Weighted_alpha_complex_3d_from_points.cpp:1: In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ In file included from /usr/include/CGAL/Static_filtered_predicate.h:15, from /usr/include/CGAL/Lazy_kernel.h:18, from /usr/include/CGAL/Exact_predicates_exact_constructions_kernel.h:27, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Alpha_complex_3d.h:24: /usr/include/CGAL/Epic_converter.h: In function 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:48:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = CGAL::Oneset_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, std::allocator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false> > > >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20, inlined from 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:4005:21: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:48:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = CGAL::Oneset_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, std::allocator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false> > > >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20, inlined from 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:4005:21: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian<__gmp_expr<__mpq_struct [1], __mpq_struct [1]> >, CGAL::NT_converter > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian >, CGAL::NT_converter > >, true>]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'bool CGAL::Regular_triangulation_3::is_Gabriel(Vertex_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:2346:44, inlined from 'void CGAL::Alpha_shape_3::set_alpha_min_of_vertices(Tag) [with Tag = CGAL::Boolean_tag; Dt = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>; ExactAlphaComparisonTag = CGAL::Boolean_tag]' at /usr/include/CGAL/Alpha_shape_3.h:342:21, inlined from 'void CGAL::Alpha_shape_3::initialize_alpha_vertex_maps(bool) [with Dt = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>; ExactAlphaComparisonTag = CGAL::Boolean_tag]' at /usr/include/CGAL/Alpha_shape_3.h:1350:30: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In member function 'void CGAL::Alpha_shape_3::initialize_alpha_vertex_maps(bool) [with Dt = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>; ExactAlphaComparisonTag = CGAL::Boolean_tag]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ [ 8%] Linking CXX executable Alpha_complex_example_weighted_3d_from_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Alpha_complex_example_weighted_3d_from_points.dir/Weighted_alpha_complex_3d_from_points.cpp.o -o Alpha_complex_example_weighted_3d_from_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 8%] Built target Alpha_complex_example_weighted_3d_from_points make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 8%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/Alpha_complex_3d_from_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Alpha_complex/CMakeFiles/Alpha_complex_example_3d_from_points.dir/Alpha_complex_3d_from_points.cpp.o -MF CMakeFiles/Alpha_complex_example_3d_from_points.dir/Alpha_complex_3d_from_points.cpp.o.d -o CMakeFiles/Alpha_complex_example_3d_from_points.dir/Alpha_complex_3d_from_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Alpha_complex_3d_from_points.cpp [ 8%] Linking CXX executable Alpha_complex_example_3d_from_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_3d_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Alpha_complex_example_3d_from_points.dir/Alpha_complex_3d_from_points.cpp.o -o Alpha_complex_example_3d_from_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 8%] Built target Alpha_complex_example_3d_from_points make -f example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 9%] Building CXX object example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/Weighted_alpha_complex_from_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Alpha_complex/CMakeFiles/Weighted_alpha_complex_example_from_points.dir/Weighted_alpha_complex_from_points.cpp.o -MF CMakeFiles/Weighted_alpha_complex_example_from_points.dir/Weighted_alpha_complex_from_points.cpp.o.d -o CMakeFiles/Weighted_alpha_complex_example_from_points.dir/Weighted_alpha_complex_from_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Alpha_complex/Weighted_alpha_complex_from_points.cpp [ 9%] Linking CXX executable Weighted_alpha_complex_example_from_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Weighted_alpha_complex_example_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Weighted_alpha_complex_example_from_points.dir/Weighted_alpha_complex_from_points.cpp.o -o Weighted_alpha_complex_example_from_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 9%] Built target Weighted_alpha_complex_example_from_points make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 10%] Building CXX object utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -MF CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o.d -o CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Alpha_complex/alpha_complex_persistence.cpp [ 10%] Linking CXX executable alpha_complex_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -o alpha_complex_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 10%] Built target alpha_complex_persistence make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 11%] Building CXX object utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -MF CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o.d -o CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp In file included from /usr/include/boost/tuple/tuple.hpp:28, from /usr/include/boost/fusion/adapted/boost_tuple/boost_tuple_iterator.hpp:21, from /usr/include/boost/fusion/adapted/boost_tuple/detail/begin_impl.hpp:11, from /usr/include/boost/fusion/adapted/boost_tuple.hpp:15, from /usr/include/boost/iterator/zip_iterator.hpp:20, from /usr/include/boost/range/combine.hpp:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Alpha_complex_3d.h:17, from /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp:14: In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ In file included from /usr/include/CGAL/Static_filtered_predicate.h:15, from /usr/include/CGAL/Lazy_kernel.h:18, from /usr/include/CGAL/Exact_predicates_exact_constructions_kernel.h:27, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Alpha_complex_3d.h:24: /usr/include/CGAL/Epic_converter.h: In function 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:48:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int>, 32, void, void> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, 32, void, void> >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&, const A3&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; A3 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian<__gmp_expr<__mpq_struct [1], __mpq_struct [1]> >, CGAL::NT_converter > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian >, CGAL::NT_converter > >, true>]' at /usr/include/CGAL/Static_filtered_predicate.h:60:10, inlined from 'CGAL::Functor_with_offset_weighted_points_adaptor_3::result_type CGAL::Functor_with_offset_weighted_points_adaptor_3::operator()(const Weighted_point_3&, const Weighted_point_3&, const Weighted_point_3&, const Offset&, const Offset&, const Offset&) const [with K_ = CGAL::Periodic_3_regular_triangulation_traits_base_3; Functor_ = CGAL::Static_filtered_predicate >, CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>, CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian<__gmp_expr<__mpq_struct [1], __mpq_struct [1]> >, CGAL::NT_converter > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian >, CGAL::NT_converter > >, true> >]' at /usr/include/CGAL/Periodic_3_triangulation_3/internal/Functor_with_offset_weighted_points_adaptor_3.h:65:22, inlined from 'bool CGAL::Periodic_3_regular_triangulation_3::is_Gabriel(Cell_handle, int, int) const [with Gt = CGAL::Periodic_3_regular_triangulation_traits_3; Tds = CGAL::Triangulation_data_structure_3, CGAL::Regular_triangulation_vertex_base_3, CGAL::Periodic_3_triangulation_ds_vertex_base_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Regular_triangulation_cell_base_3, CGAL::Periodic_3_triangulation_ds_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>]' at /usr/include/CGAL/Periodic_3_regular_triangulation_3.h:1124:38: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In member function 'bool CGAL::Periodic_3_regular_triangulation_3::is_Gabriel(Cell_handle, int, int) const [with Gt = CGAL::Periodic_3_regular_triangulation_traits_3; Tds = CGAL::Triangulation_data_structure_3, CGAL::Regular_triangulation_vertex_base_3, CGAL::Periodic_3_triangulation_ds_vertex_base_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Regular_triangulation_cell_base_3, CGAL::Periodic_3_triangulation_ds_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian<__gmp_expr<__mpq_struct [1], __mpq_struct [1]> >, CGAL::NT_converter > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian >, CGAL::NT_converter > >, true>]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'CGAL::Functor_with_offset_weighted_points_adaptor_3::result_type CGAL::Functor_with_offset_weighted_points_adaptor_3::operator()(const Weighted_point_3&, const Weighted_point_3&, const Offset&, const Offset&) const [with K_ = CGAL::Periodic_3_regular_triangulation_traits_base_3; Functor_ = CGAL::Static_filtered_predicate >, CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>, CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian<__gmp_expr<__mpq_struct [1], __mpq_struct [1]> >, CGAL::NT_converter > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian >, CGAL::NT_converter > >, true> >]' at /usr/include/CGAL/Periodic_3_triangulation_3/internal/Functor_with_offset_weighted_points_adaptor_3.h:58:22, inlined from 'bool CGAL::Periodic_3_regular_triangulation_3::is_Gabriel(Vertex_handle) const [with Gt = CGAL::Periodic_3_regular_triangulation_traits_3; Tds = CGAL::Triangulation_data_structure_3, CGAL::Regular_triangulation_vertex_base_3, CGAL::Periodic_3_triangulation_ds_vertex_base_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Regular_triangulation_cell_base_3, CGAL::Periodic_3_triangulation_ds_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>]' at /usr/include/CGAL/Periodic_3_regular_triangulation_3.h:1155:46, inlined from 'void CGAL::Alpha_shape_3::set_alpha_min_of_vertices(Tag) [with Tag = CGAL::Boolean_tag; Dt = CGAL::Periodic_3_regular_triangulation_3, CGAL::Triangulation_data_structure_3, CGAL::Regular_triangulation_vertex_base_3, CGAL::Periodic_3_triangulation_ds_vertex_base_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Regular_triangulation_cell_base_3, CGAL::Periodic_3_triangulation_ds_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >; ExactAlphaComparisonTag = CGAL::Boolean_tag]' at /usr/include/CGAL/Alpha_shape_3.h:342:21, inlined from 'void CGAL::Alpha_shape_3::initialize_alpha_vertex_maps(bool) [with Dt = CGAL::Periodic_3_regular_triangulation_3, CGAL::Triangulation_data_structure_3, CGAL::Regular_triangulation_vertex_base_3, CGAL::Periodic_3_triangulation_ds_vertex_base_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Regular_triangulation_cell_base_3, CGAL::Periodic_3_triangulation_ds_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >; ExactAlphaComparisonTag = CGAL::Boolean_tag]' at /usr/include/CGAL/Alpha_shape_3.h:1350:30: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In member function 'void CGAL::Alpha_shape_3::initialize_alpha_vertex_maps(bool) [with Dt = CGAL::Periodic_3_regular_triangulation_3, CGAL::Triangulation_data_structure_3, CGAL::Regular_triangulation_vertex_base_3, CGAL::Periodic_3_triangulation_ds_vertex_base_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Regular_triangulation_cell_base_3, CGAL::Periodic_3_triangulation_ds_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >; ExactAlphaComparisonTag = CGAL::Boolean_tag]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = CGAL::Oneset_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, std::allocator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false> > > >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20, inlined from 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:4005:21: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_oriented_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::internal::Static_filters_predicates::Power_side_of_oriented_power_sphere_3, CGAL::Epick> > >]' at /usr/include/CGAL/Static_filtered_predicate.h:48:10, inlined from 'CGAL::Oriented_side CGAL::Regular_triangulation_3::power_test(const Weighted_point&, const Weighted_point&) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1073:72, inlined from 'bool CGAL::Regular_triangulation_3::in_conflict_0(const Weighted_point&, Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1114:22, inlined from 'bool CGAL::Regular_triangulation_3::Conflict_tester_0::operator()(CGAL::Regular_triangulation_3::Cell_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:1229:30, inlined from 'CGAL::Triple CGAL::Triangulation_3::find_conflicts(Cell_handle, const Conflict_test&, CGAL::Triple, bool*, const Facet*, bool*) const [with Conflict_test = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; OutputIteratorBoundaryFacets = CGAL::Oneset_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, int> >; OutputIteratorCells = std::back_insert_iterator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false>, std::allocator >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag> >, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Default, CGAL::Default, CGAL::Default>, false> > > >; OutputIteratorInternalFacets = CGAL::Emptyset_iterator; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:1389:20, inlined from 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Triangulation_3.h:4005:21: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In function 'CGAL::Triangulation_3::Vertex_handle CGAL::Triangulation_3::insert_in_conflict(const Point&, Locate_type, Cell_handle, int, int, const Conflict_tester&, Hidden_points_visitor&, bool*) [with Conflict_tester = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Conflict_tester_0; Hidden_points_visitor = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>::Hidden_point_visitor; GT = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ In copy constructor 'boost::tuples::cons::cons(const boost::tuples::cons&) [with HT = CGAL::Point_3; TT = boost::tuples::cons]', inlined from 'boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::tuple(boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>&&)' at /usr/include/boost/tuple/detail/tuple_basic.hpp:478:7, inlined from 'CGAL::Weighted_pointC3::Weighted_pointC3(CGAL::Weighted_pointC3&&)' at /usr/include/CGAL/Cartesian/Weighted_point_3.h:30:7, inlined from 'CGAL::Weighted_point_3::Weighted_point_3(CGAL::Weighted_point_3&&)' at /usr/include/CGAL/Weighted_point_3.h:32:7, inlined from 'constexpr std::pair<_T1, _T2>::pair(_U1&&, _U2&&) [with _U1 = CGAL::Weighted_point_3; _U2 = bool; typename std::enable_if<(std::_PCC::_MoveConstructiblePair<_U1, _U2>() && std::_PCC::_ImplicitlyMoveConvertiblePair<_U1, _U2>()), bool>::type = true; _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:535:4, inlined from 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = CGAL::Weighted_point_3; _T2 = bool]' at /usr/include/c++/12/bits/stl_pair.h:746:72, inlined from 'std::pair, bool> CGAL::Epic_converter::operator()(const typename IK::Weighted_point_3&) const [with IK = CGAL::Simple_cartesian >]' at /usr/include/CGAL/Epic_converter.h:321:51, inlined from 'CGAL::Static_filtered_predicate::result_type CGAL::Static_filtered_predicate::operator()(const A1&, const A2&) const [with A1 = CGAL::Weighted_point_3; A2 = CGAL::Weighted_point_3; AK = CGAL::Simple_cartesian >; FP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Exact_converter > >, CGAL::Approx_converter > >, true>; EpicP = CGAL::Filtered_predicate > >, CGAL::CommonKernelFunctors::Power_side_of_bounded_power_sphere_3 > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian<__gmp_expr<__mpq_struct [1], __mpq_struct [1]> >, CGAL::NT_converter > >, CGAL::Cartesian_converter, CGAL::Epick>, CGAL::Simple_cartesian >, CGAL::NT_converter > >, true>]' at /usr/include/CGAL/Static_filtered_predicate.h:44:10, inlined from 'bool CGAL::Regular_triangulation_3::is_Gabriel(Vertex_handle) const [with Gt = CGAL::Epeck; Tds_ = CGAL::Triangulation_data_structure_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default]' at /usr/include/CGAL/Regular_triangulation_3.h:2346:44, inlined from 'void CGAL::Alpha_shape_3::set_alpha_min_of_vertices(Tag) [with Tag = CGAL::Boolean_tag; Dt = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>; ExactAlphaComparisonTag = CGAL::Boolean_tag]' at /usr/include/CGAL/Alpha_shape_3.h:342:21, inlined from 'void CGAL::Alpha_shape_3::initialize_alpha_vertex_maps(bool) [with Dt = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>; ExactAlphaComparisonTag = CGAL::Boolean_tag]' at /usr/include/CGAL/Alpha_shape_3.h:1350:30: /usr/include/boost/tuple/detail/tuple_basic.hpp:313:27: warning: '.CGAL::Weighted_point_3::.CGAL::Weighted_pointC3::base.boost::tuples::tuple, double, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>::.boost::tuples::cons, boost::tuples::cons >::head' may be used uninitialized [-Wmaybe-uninitialized] 313 | cons( const cons& u ) : head(u.head), tail(u.tail) {} | ^~~~~~~~~~~~ /usr/include/CGAL/Epic_converter.h: In member function 'void CGAL::Alpha_shape_3::initialize_alpha_vertex_maps(bool) [with Dt = CGAL::Regular_triangulation_3 >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Alpha_shape_cell_base_3, CGAL::Hidden_points_memory_policy >, std::__cxx11::list, std::allocator > > >, CGAL::Boolean_tag, CGAL::Boolean_tag >, CGAL::Sequential_tag>, CGAL::Default>; ExactAlphaComparisonTag = CGAL::Boolean_tag]': /usr/include/CGAL/Epic_converter.h:321:27: note: '' declared here 321 | return std::make_pair(Weighted_point_3(),false); | ^~~~~~~~~~~~~~~~~~ [ 11%] Linking CXX executable alpha_complex_3d_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -o alpha_complex_3d_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 11%] Built target alpha_complex_3d_persistence make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Bitmap_cubical_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bitmap_cubical_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 11%] Building CXX object example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -MF CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o.d -o CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Bitmap_cubical_complex/Random_bitmap_cubical_complex.cpp [ 12%] Linking CXX executable Random_bitmap_cubical_complex cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Random_bitmap_cubical_complex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -o Random_bitmap_cubical_complex /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 12%] Built target Random_bitmap_cubical_complex make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Bitmap_cubical_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 13%] Building CXX object utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -MF CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o.d -o CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp [ 13%] Linking CXX executable cubical_complex_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/cubical_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -o cubical_complex_persistence /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 13%] Built target cubical_complex_persistence make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Bitmap_cubical_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 14%] Building CXX object utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -MF CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o.d -o CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp [ 14%] Linking CXX executable periodic_cubical_complex_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/periodic_cubical_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -o periodic_cubical_complex_persistence /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 14%] Built target periodic_cubical_complex_persistence make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Bottleneck_distance /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 15%] Building CXX object example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -MF CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o.d -o CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Bottleneck_distance/bottleneck_basic_example.cpp [ 15%] Linking CXX executable bottleneck_basic_example cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/bottleneck_basic_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -o bottleneck_basic_example /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 15%] Built target bottleneck_basic_example make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Bottleneck_distance /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 15%] Building CXX object example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -MF CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o.d -o CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Bottleneck_distance/alpha_rips_persistence_bottleneck_distance.cpp [ 16%] Linking CXX executable alpha_rips_persistence_bottleneck_distance cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -o alpha_rips_persistence_bottleneck_distance /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 16%] Built target alpha_rips_persistence_bottleneck_distance make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Bottleneck_distance /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bottleneck_distance /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 17%] Building CXX object utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -MF CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o.d -o CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Bottleneck_distance/bottleneck_distance.cpp [ 17%] Linking CXX executable bottleneck_distance cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -o bottleneck_distance /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 17%] Built target bottleneck_distance make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Cech_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Cech_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 17%] Building CXX object example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -MF CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o.d -o CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Cech_complex/cech_complex_example_from_points.cpp In file included from /usr/include/boost/graph/detail/adjacency_list.hpp:35, from /usr/include/boost/graph/adjacency_list.hpp:255, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/graph_simplicial_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Cech_complex.h:16, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Cech_complex/cech_complex_example_from_points.cpp:1: In member function 'boost::detail::adj_list_edge_iterator::self& boost::detail::adj_list_edge_iterator::operator++() [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>]', inlined from 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2188:63: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:80:13: warning: '((boost::detail::stored_edge_property >* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)))[2]' may be used uninitialized [-Wmaybe-uninitialized] 80 | if (edges BOOST_GRAPH_MEMBER first | ^~ /usr/include/boost/graph/detail/adjacency_list.hpp: In member function 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]': /usr/include/boost/graph/detail/adjacency_list.hpp:2187:23: note: '((boost::detail::stored_edge_property >* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)))[2]' was declared here 2187 | edge_iterator ei, ei_end; | ^~ In file included from /usr/include/c++/12/bits/stl_algobase.h:67, from /usr/include/c++/12/algorithm:60, from /usr/include/CGAL/config.h:282, from /usr/include/CGAL/basic.h:21, from /usr/include/CGAL/NewKernel_d/Cartesian_base.h:15, from /usr/include/CGAL/Epick_d.h:17, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Sphere_circumradius.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Cech_complex.h:15: In member function '__gnu_cxx::__normal_iterator<_Iterator, _Container>& __gnu_cxx::__normal_iterator<_Iterator, _Container>::operator++() [with _Iterator = boost::detail::stored_edge_property >*; _Container = std::vector >, std::allocator > > >]', inlined from 'void boost::iterators::iterator_adaptor::increment() [with Derived = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Base = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Value = boost::detail::edge_desc_impl; Traversal = boost::use_default; Reference = boost::detail::edge_desc_impl; Difference = long int]' at /usr/include/boost/iterator/iterator_adaptor.hpp:321:26, inlined from 'static void boost::iterators::iterator_core_access::increment(Facade&) [with Facade = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>]' at /usr/include/boost/iterator/iterator_facade.hpp:556:22, inlined from 'Derived& boost::iterators::detail::iterator_facade_base::operator++() [with Derived = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Value = boost::detail::edge_desc_impl; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = boost::detail::edge_desc_impl; Difference = long int]' at /usr/include/boost/iterator/iterator_facade.hpp:666:44, inlined from 'boost::detail::adj_list_edge_iterator::self& boost::detail::adj_list_edge_iterator::operator++() [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>]' at /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:79:13, inlined from 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2188:63: /usr/include/c++/12/bits/stl_iterator.h:1107:9: warning: '*(__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)).__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >::_M_current' may be used uninitialized [-Wmaybe-uninitialized] 1107 | ++_M_current; | ^~ /usr/include/boost/graph/detail/adjacency_list.hpp: In member function 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]': /usr/include/boost/graph/detail/adjacency_list.hpp:2187:23: note: '*(__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)).__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >::_M_current' was declared here 2187 | edge_iterator ei, ei_end; | ^~ [ 18%] Linking CXX executable Cech_complex_example_from_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cech_complex_example_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -o Cech_complex_example_from_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 18%] Built target Cech_complex_example_from_points make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Cech_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 19%] Building CXX object utilities/Cech_complex/CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Cech_complex/CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -MF CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o.d -o CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Cech_complex/cech_persistence.cpp In file included from /usr/include/boost/graph/detail/adjacency_list.hpp:35, from /usr/include/boost/graph/adjacency_list.hpp:255, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/graph_simplicial_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Cech_complex.h:16, from /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Cech_complex/cech_persistence.cpp:11: In member function 'boost::detail::adj_list_edge_iterator::self& boost::detail::adj_list_edge_iterator::operator++() [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>]', inlined from 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2188:63: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:80:13: warning: '((boost::detail::stored_edge_property >* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)))[2]' may be used uninitialized [-Wmaybe-uninitialized] 80 | if (edges BOOST_GRAPH_MEMBER first | ^~ /usr/include/boost/graph/detail/adjacency_list.hpp: In member function 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]': /usr/include/boost/graph/detail/adjacency_list.hpp:2187:23: note: '((boost::detail::stored_edge_property >* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)))[2]' was declared here 2187 | edge_iterator ei, ei_end; | ^~ In file included from /usr/include/c++/12/bits/stl_algobase.h:67, from /usr/include/c++/12/algorithm:60, from /usr/include/CGAL/config.h:282, from /usr/include/CGAL/basic.h:21, from /usr/include/CGAL/NewKernel_d/Cartesian_base.h:15, from /usr/include/CGAL/Epick_d.h:17, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Sphere_circumradius.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Cech_complex.h:15: In member function '__gnu_cxx::__normal_iterator<_Iterator, _Container>& __gnu_cxx::__normal_iterator<_Iterator, _Container>::operator++() [with _Iterator = boost::detail::stored_edge_property >*; _Container = std::vector >, std::allocator > > >]', inlined from 'void boost::iterators::iterator_adaptor::increment() [with Derived = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Base = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Value = boost::detail::edge_desc_impl; Traversal = boost::use_default; Reference = boost::detail::edge_desc_impl; Difference = long int]' at /usr/include/boost/iterator/iterator_adaptor.hpp:321:26, inlined from 'static void boost::iterators::iterator_core_access::increment(Facade&) [with Facade = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>]' at /usr/include/boost/iterator/iterator_facade.hpp:556:22, inlined from 'Derived& boost::iterators::detail::iterator_facade_base::operator++() [with Derived = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Value = boost::detail::edge_desc_impl; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = boost::detail::edge_desc_impl; Difference = long int]' at /usr/include/boost/iterator/iterator_facade.hpp:666:44, inlined from 'boost::detail::adj_list_edge_iterator::self& boost::detail::adj_list_edge_iterator::operator++() [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>; Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>]' at /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:79:13, inlined from 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2188:63: /usr/include/c++/12/bits/stl_iterator.h:1107:9: warning: '*(__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)).__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >::_M_current' may be used uninitialized [-Wmaybe-uninitialized] 1107 | ++_M_current; | ^~ /usr/include/boost/graph/detail/adjacency_list.hpp: In member function 'void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list, boost::property, boost::no_property, boost::listS>; Config = boost::detail::adj_list_gen, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config; Base = boost::directed_graph_helper, boost::property, boost::no_property, boost::listS>, boost::vecS, boost::vecS, boost::directedS, boost::property, boost::property, boost::no_property, boost::listS>::config>]': /usr/include/boost/graph/detail/adjacency_list.hpp:2187:23: note: '*(__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::adjacency_list, boost::property, boost::no_property, boost::listS> >::edges.boost::optional >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::.boost::optional_detail::optional_base >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::m_storage.boost::optional_detail::aligned_storage >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, long unsigned int, boost::detail::edge_desc_impl, long int> > >::dummy_)).__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >::_M_current' was declared here 2187 | edge_iterator ei, ei_end; | ^~ [ 19%] Linking CXX executable cech_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/cech_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -o cech_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 19%] Built target cech_persistence make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 19%] Building CXX object example/Contraction/CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Contraction/CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -MF CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o.d -o CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:11: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:111:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = Point_d; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:34:37: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:57:13: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:35:42: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:57:13: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:110:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = Point_d; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:34:37: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:57:13: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_simplifiable_complex.h:426:16: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::update_edges_after_contraction(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_simplifiable_complex.h:357:3: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_contractor.h:461:27: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >; EdgeProfile = Gudhi::contraction::Edge_profile > >; Profile = Gudhi::contraction::Edge_profile > >; Placement_type = boost::optional]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_contractor.h:357:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >; EdgeProfile = Gudhi::contraction::Edge_profile > >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Rips_contraction.cpp:70:28: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 19%] Linking CXX executable RipsContraction cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction && /usr/bin/cmake -E cmake_link_script CMakeFiles/RipsContraction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -o RipsContraction /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 19%] Built target RipsContraction make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 19%] Building CXX object example/Contraction/CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Contraction/CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -MF CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o.d -o CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Garland_heckbert.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Garland_heckbert.cpp:17: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Graph_vertex = Garland_heckbert_traits::Garland_heckbert_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Garland_heckbert.cpp:108:33: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Graph_vertex = Garland_heckbert_traits::Garland_heckbert_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:110:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Garland_heckbert_traits; Point = Point_d; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Garland_heckbert.cpp:111:37: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_simplifiable_complex.h:345:36: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_contractor.h:461:27: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >; Profile = Gudhi::contraction::Edge_profile >; Placement_type = boost::optional]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_contractor.h:357:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Garland_heckbert.cpp:162:28: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_simplifiable_complex.h:426:16: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::update_edges_after_contraction(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_simplifiable_complex.h:357:3: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_contractor.h:461:27: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >; Profile = Gudhi::contraction::Edge_profile >; Placement_type = boost::optional]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_contractor.h:357:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Contraction/Garland_heckbert.cpp:162:28: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 20%] Linking CXX executable GarlandHeckbert cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction && /usr/bin/cmake -E cmake_link_script CMakeFiles/GarlandHeckbert.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -o GarlandHeckbert /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 20%] Built target GarlandHeckbert make -f example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/build.make example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/build.make example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 21%] Building CXX object example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/edge_collapse_basic_example.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Collapse/CMakeFiles/Edge_collapse_example_basic.dir/edge_collapse_basic_example.cpp.o -MF CMakeFiles/Edge_collapse_example_basic.dir/edge_collapse_basic_example.cpp.o.d -o CMakeFiles/Edge_collapse_example_basic.dir/edge_collapse_basic_example.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Collapse/edge_collapse_basic_example.cpp [ 21%] Linking CXX executable Edge_collapse_example_basic cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/Edge_collapse_example_basic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Edge_collapse_example_basic.dir/edge_collapse_basic_example.cpp.o -o Edge_collapse_example_basic /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 21%] Built target Edge_collapse_example_basic make -f example/Collapse/CMakeFiles/Edge_collapse_conserve_persistence.dir/build.make example/Collapse/CMakeFiles/Edge_collapse_conserve_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse/CMakeFiles/Edge_collapse_conserve_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Collapse/CMakeFiles/Edge_collapse_conserve_persistence.dir/build.make example/Collapse/CMakeFiles/Edge_collapse_conserve_persistence.dir/build make[4]: Entering directory 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utilities/Collapse/CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/build.make utilities/Collapse/CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse/CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Collapse/CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/build.make utilities/Collapse/CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/build make[4]: Entering 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CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/point_cloud_edge_collapse_rips_persistence.cpp.o.d -o CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/point_cloud_edge_collapse_rips_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Collapse/point_cloud_edge_collapse_rips_persistence.cpp [ 23%] Linking CXX executable point_cloud_edge_collapse_rips_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/point_cloud_edge_collapse_rips_persistence.dir/point_cloud_edge_collapse_rips_persistence.cpp.o -o point_cloud_edge_collapse_rips_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 23%] Built target point_cloud_edge_collapse_rips_persistence make -f utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/build.make utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/build.make utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 23%] Building CXX object utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/distance_matrix_edge_collapse_rips_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Collapse/CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/distance_matrix_edge_collapse_rips_persistence.cpp.o -MF CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/distance_matrix_edge_collapse_rips_persistence.cpp.o.d -o CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/distance_matrix_edge_collapse_rips_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Collapse/distance_matrix_edge_collapse_rips_persistence.cpp [ 24%] Linking CXX executable distance_matrix_edge_collapse_rips_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/distance_matrix_edge_collapse_rips_persistence.dir/distance_matrix_edge_collapse_rips_persistence.cpp.o -o distance_matrix_edge_collapse_rips_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 24%] Built target distance_matrix_edge_collapse_rips_persistence make -f example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/build.make example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/build.make example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 25%] Building CXX object example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/manifold_tracing_flat_torus_with_boundary.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/manifold_tracing_flat_torus_with_boundary.cpp.o -MF CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/manifold_tracing_flat_torus_with_boundary.cpp.o.d -o CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/manifold_tracing_flat_torus_with_boundary.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation/manifold_tracing_flat_torus_with_boundary.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Freudenthal_triangulation.h:23, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Coxeter_triangulation.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation/manifold_tracing_flat_torus_with_boundary.cpp:8: In copy constructor 'Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >::Face_iterator(const Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >&)', inlined from 'boost::iterator_range::iterator_range(Iterator, Iterator) [with Iterator = Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >; IteratorT = Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >]' at /usr/include/boost/range/iterator_range_core.hpp:484:40, inlined from 'Gudhi::coxeter_triangulation::Permutahedral_representation::Face_range Gudhi::coxeter_triangulation::Permutahedral_representation::face_range(std::size_t) const [with Vertex_ = std::vector; Ordered_set_partition_ = std::vector >]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:108:71, inlined from 'void Gudhi::coxeter_triangulation::Manifold_tracing::manifold_tracing_algorithm(const Point_range&, const Triangulation_&, const Intersection_oracle&, Out_simplex_map&, Out_simplex_map&) [with Point_range = std::vector >; Intersection_oracle = Gudhi::coxeter_triangulation::Implicit_manifold_intersection_oracle >, Gudhi::coxeter_triangulation::Function_affine_plane_in_Rd>; Triangulation_ = Gudhi::coxeter_triangulation::Coxeter_triangulation<>]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Manifold_tracing.h:170:9: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation/Permutahedral_representation_iterators.h:91:7: warning: '*(const __vector(2) unsigned int*)((char*)& + offsetof(Gudhi::coxeter_triangulation::Face_iterator, Gudhi::coxeter_triangulation::Face_iterator >, std::vector >, std::allocator > > > > >::k_))' may be used uninitialized [-Wmaybe-uninitialized] 91 | class Face_iterator : public boost::iterator_facade, | ^~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h: In function 'void Gudhi::coxeter_triangulation::Manifold_tracing::manifold_tracing_algorithm(const Point_range&, const Triangulation_&, const Intersection_oracle&, Out_simplex_map&, Out_simplex_map&) [with Point_range = std::vector >; Intersection_oracle = Gudhi::coxeter_triangulation::Implicit_manifold_intersection_oracle >, Gudhi::coxeter_triangulation::Function_affine_plane_in_Rd>; Triangulation_ = Gudhi::coxeter_triangulation::Coxeter_triangulation<>]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:108:56: note: '' declared here 108 | return Face_range(Face_iterator(*this, value_dim), Face_iterator()); | ^~~~~~~~~~~~~~~ [ 25%] Linking CXX executable Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation && /usr/bin/cmake -E cmake_link_script CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example.dir/manifold_tracing_flat_torus_with_boundary.cpp.o -o Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 25%] Built target Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example make -f example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/build.make example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/build.make example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 26%] Building CXX object example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/manifold_tracing_custom_function.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/manifold_tracing_custom_function.cpp.o -MF CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/manifold_tracing_custom_function.cpp.o.d -o CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/manifold_tracing_custom_function.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation/manifold_tracing_custom_function.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Freudenthal_triangulation.h:23, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Coxeter_triangulation.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation/manifold_tracing_custom_function.cpp:3: In copy constructor 'Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >::Face_iterator(const Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >&)', inlined from 'boost::iterator_range::iterator_range(Iterator, Iterator) [with Iterator = Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >; IteratorT = Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >]' at /usr/include/boost/range/iterator_range_core.hpp:484:40, inlined from 'Gudhi::coxeter_triangulation::Permutahedral_representation::Face_range Gudhi::coxeter_triangulation::Permutahedral_representation::face_range(std::size_t) const [with Vertex_ = std::vector; Ordered_set_partition_ = std::vector >]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:108:71, inlined from 'void Gudhi::coxeter_triangulation::Manifold_tracing::manifold_tracing_algorithm(const Point_range&, const Triangulation_&, const Intersection_oracle&, Out_simplex_map&, Out_simplex_map&) [with Point_range = std::vector >; Intersection_oracle = Gudhi::coxeter_triangulation::Implicit_manifold_intersection_oracle; Triangulation_ = Gudhi::coxeter_triangulation::Coxeter_triangulation<>]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Manifold_tracing.h:170:9: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation/Permutahedral_representation_iterators.h:91:7: warning: '*(const __vector(2) unsigned int*)((char*)& + offsetof(Gudhi::coxeter_triangulation::Face_iterator, Gudhi::coxeter_triangulation::Face_iterator >, std::vector >, std::allocator > > > > >::k_))' may be used uninitialized [-Wmaybe-uninitialized] 91 | class Face_iterator : public boost::iterator_facade, | ^~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h: In function 'void Gudhi::coxeter_triangulation::Manifold_tracing::manifold_tracing_algorithm(const Point_range&, const Triangulation_&, const Intersection_oracle&, Out_simplex_map&, Out_simplex_map&) [with Point_range = std::vector >; Intersection_oracle = Gudhi::coxeter_triangulation::Implicit_manifold_intersection_oracle; Triangulation_ = Gudhi::coxeter_triangulation::Coxeter_triangulation<>]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:108:56: note: '' declared here 108 | return Face_range(Face_iterator(*this, value_dim), Face_iterator()); | ^~~~~~~~~~~~~~~ [ 26%] Linking CXX executable Coxeter_triangulation_manifold_tracing_custom_function_example cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation && /usr/bin/cmake -E cmake_link_script CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Coxeter_triangulation_manifold_tracing_custom_function_example.dir/manifold_tracing_custom_function.cpp.o -o Coxeter_triangulation_manifold_tracing_custom_function_example /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 26%] Built target Coxeter_triangulation_manifold_tracing_custom_function_example make -f example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/build.make example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/build.make example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 26%] Building CXX object example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/cell_complex_from_basic_circle_manifold.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Coxeter_triangulation/CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/cell_complex_from_basic_circle_manifold.cpp.o -MF CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/cell_complex_from_basic_circle_manifold.cpp.o.d -o CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/cell_complex_from_basic_circle_manifold.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation/cell_complex_from_basic_circle_manifold.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Freudenthal_triangulation.h:23, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Coxeter_triangulation.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Coxeter_triangulation/cell_complex_from_basic_circle_manifold.cpp:3: In copy constructor 'Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >::Face_iterator(const Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >&)', inlined from 'boost::iterator_range::iterator_range(Iterator, Iterator) [with Iterator = Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >; IteratorT = Gudhi::coxeter_triangulation::Face_iterator, std::vector > > >]' at /usr/include/boost/range/iterator_range_core.hpp:484:40, inlined from 'Gudhi::coxeter_triangulation::Permutahedral_representation::Face_range Gudhi::coxeter_triangulation::Permutahedral_representation::face_range(std::size_t) const [with Vertex_ = std::vector; Ordered_set_partition_ = std::vector >]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:108:71, inlined from 'void Gudhi::coxeter_triangulation::Manifold_tracing::manifold_tracing_algorithm(const Point_range&, const Triangulation_&, const Intersection_oracle&, Out_simplex_map&) [with Point_range = std::vector >; Intersection_oracle = Gudhi::coxeter_triangulation::Implicit_manifold_intersection_oracle; Triangulation_ = Gudhi::coxeter_triangulation::Coxeter_triangulation<>]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Manifold_tracing.h:103:9: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation/Permutahedral_representation_iterators.h:91:7: warning: '*(const __vector(2) unsigned int*)((char*)& + offsetof(Gudhi::coxeter_triangulation::Face_iterator, Gudhi::coxeter_triangulation::Face_iterator >, std::vector >, std::allocator > > > > >::k_))' may be used uninitialized [-Wmaybe-uninitialized] 91 | class Face_iterator : public boost::iterator_facade, | ^~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h: In function 'void Gudhi::coxeter_triangulation::Manifold_tracing::manifold_tracing_algorithm(const Point_range&, const Triangulation_&, const Intersection_oracle&, Out_simplex_map&) [with Point_range = std::vector >; Intersection_oracle = Gudhi::coxeter_triangulation::Implicit_manifold_intersection_oracle; Triangulation_ = Gudhi::coxeter_triangulation::Coxeter_triangulation<>]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Permutahedral_representation.h:108:56: note: '' declared here 108 | return Face_range(Face_iterator(*this, value_dim), Face_iterator()); | ^~~~~~~~~~~~~~~ [ 26%] Linking CXX executable Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation && /usr/bin/cmake -E cmake_link_script CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example.dir/cell_complex_from_basic_circle_manifold.cpp.o -o Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 26%] Built target Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 26%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -MF CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o.d -o CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/persistence_landscape_on_grid.cpp [ 27%] Linking CXX executable Persistence_representations_example_landscape_on_grid cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -o Persistence_representations_example_landscape_on_grid /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 27%] Built target Persistence_representations_example_landscape_on_grid make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 28%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -MF CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o.d -o CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/persistence_landscape.cpp [ 28%] Linking CXX executable Persistence_representations_example_landscape cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_landscape.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -o Persistence_representations_example_landscape /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 28%] Built target Persistence_representations_example_landscape make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 29%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -MF CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o.d -o CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/persistence_intervals.cpp [ 29%] Linking CXX executable Persistence_representations_example_intervals cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -o Persistence_representations_example_intervals /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 29%] Built target Persistence_representations_example_intervals make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 29%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -MF CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o.d -o CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/persistence_vectors.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/persistence_vectors.cpp:11: In member function 'Gudhi::Persistence_representations::Vector_distances_in_diagram& Gudhi::Persistence_representations::Vector_distances_in_diagram::operator=(Gudhi::Persistence_representations::Vector_distances_in_diagram&&)', inlined from 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:13: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:54:7: warning: '*(__vector(2) long unsigned int*)((char*)& + offsetof(Gudhi::Persistence_representations::Vector_distances_in_diagram,Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_vectorization))' may be used uninitialized [-Wmaybe-uninitialized] 54 | class Vector_distances_in_diagram { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:15: note: '' declared here 492 | (*this) = Vector_distances_in_diagram(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'Gudhi::Persistence_representations::Vector_distances_in_diagram& Gudhi::Persistence_representations::Vector_distances_in_diagram::operator=(Gudhi::Persistence_representations::Vector_distances_in_diagram&&)', inlined from 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:13: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:54:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::where_to_cut' may be used uninitialized [-Wmaybe-uninitialized] 54 | class Vector_distances_in_diagram { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:15: note: '' declared here 492 | (*this) = Vector_distances_in_diagram(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 30%] Linking CXX executable Persistence_representations_example_vectors cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -o Persistence_representations_example_vectors /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 30%] Built target Persistence_representations_example_vectors make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 31%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -MF CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o.d -o CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/persistence_heat_maps.cpp [ 31%] Linking CXX executable Persistence_representations_example_heat_maps cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -o Persistence_representations_example_heat_maps /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 31%] Built target Persistence_representations_example_heat_maps make -f example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/build.make example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/build.make example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 32%] Building CXX object example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/sliced_wasserstein.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistence_representations/CMakeFiles/Sliced_Wasserstein.dir/sliced_wasserstein.cpp.o -MF CMakeFiles/Sliced_Wasserstein.dir/sliced_wasserstein.cpp.o.d -o CMakeFiles/Sliced_Wasserstein.dir/sliced_wasserstein.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistence_representations/sliced_wasserstein.cpp [ 32%] Linking CXX executable Sliced_Wasserstein cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Sliced_Wasserstein.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Sliced_Wasserstein.dir/sliced_wasserstein.cpp.o -o Sliced_Wasserstein /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 32%] Built target Sliced_Wasserstein make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/create_pssk.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/create_pssk.cpp.o -MF CMakeFiles/create_pssk.dir/create_pssk.cpp.o.d -o CMakeFiles/create_pssk.dir/create_pssk.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp [ 33%] Linking CXX executable create_pssk cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_pssk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_pssk.dir/create_pssk.cpp.o -o create_pssk /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 33%] Built target create_pssk make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -MF CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o.d -o CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp [ 34%] Linking CXX executable create_p_h_m_weighted_by_arctan_of_their_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -o create_p_h_m_weighted_by_arctan_of_their_persistence /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 34%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 34%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -MF CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o.d -o CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp [ 35%] Linking CXX executable create_p_h_m_weighted_by_distance_from_diagonal cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -o create_p_h_m_weighted_by_distance_from_diagonal /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 35%] Built target create_p_h_m_weighted_by_distance_from_diagonal make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 35%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -MF CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o.d -o CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp [ 36%] Linking CXX executable create_p_h_m_weighted_by_squared_diag_distance cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -o create_p_h_m_weighted_by_squared_diag_distance /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 36%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 36%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -MF CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o.d -o CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp [ 36%] Linking CXX executable create_persistence_heat_maps cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -o create_persistence_heat_maps /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 36%] Built target create_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 37%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -MF CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o.d -o CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp [ 37%] Linking CXX executable plot_persistence_heat_map cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_heat_map.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -o plot_persistence_heat_map /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 37%] Built target plot_persistence_heat_map make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 37%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -MF CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o.d -o CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp [ 37%] Linking CXX executable average_persistence_heat_maps cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -o average_persistence_heat_maps /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 37%] Built target average_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -MF CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o.d -o CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp [ 38%] Linking CXX executable compute_distance_of_persistence_heat_maps cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -o compute_distance_of_persistence_heat_maps /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Built target compute_distance_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -MF CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o.d -o CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp [ 38%] Linking CXX executable compute_scalar_product_of_persistence_heat_maps cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -o compute_scalar_product_of_persistence_heat_maps /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Built target compute_scalar_product_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -MF CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o.d -o CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp [ 38%] Linking CXX executable plot_histogram_of_intervals_lengths cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_histogram_of_intervals_lengths.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -o plot_histogram_of_intervals_lengths /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Built target plot_histogram_of_intervals_lengths make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 38%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -MF CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o.d -o CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp [ 39%] Linking CXX executable plot_persistence_intervals cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -o plot_persistence_intervals /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 39%] Built target plot_persistence_intervals make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 40%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -MF CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o.d -o CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp [ 40%] Linking CXX executable plot_persistence_Betti_numbers cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_Betti_numbers.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -o plot_persistence_Betti_numbers /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 40%] Built target plot_persistence_Betti_numbers make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 40%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -MF CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o.d -o CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp [ 41%] Linking CXX executable compute_birth_death_range_in_persistence_diagram cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -o compute_birth_death_range_in_persistence_diagram /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 41%] Built target compute_birth_death_range_in_persistence_diagram make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 41%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -MF CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o.d -o CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp [ 42%] Linking CXX executable compute_number_of_dominant_intervals cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_number_of_dominant_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -o compute_number_of_dominant_intervals /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 42%] Built target compute_number_of_dominant_intervals make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 42%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -MF CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o.d -o CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp [ 42%] Linking CXX executable compute_bottleneck_distance cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -o compute_bottleneck_distance /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 42%] Built target compute_bottleneck_distance make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 43%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -MF CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o.d -o CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp [ 43%] Linking CXX executable create_landscapes cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -o create_landscapes /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 43%] Built target create_landscapes make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 44%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -MF CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o.d -o CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp [ 44%] Linking CXX executable plot_landscapes cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -o plot_landscapes /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 44%] Built target plot_landscapes make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 44%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -MF CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o.d -o CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp [ 45%] Linking CXX executable average_landscapes cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -o average_landscapes /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 45%] Built target average_landscapes make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 46%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -MF CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o.d -o CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp [ 46%] Linking CXX executable compute_distance_of_landscapes cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -o compute_distance_of_landscapes /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 46%] Built target compute_distance_of_landscapes make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 46%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -MF CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o.d -o CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp [ 47%] Linking CXX executable compute_scalar_product_of_landscapes cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -o compute_scalar_product_of_landscapes /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 47%] Built target compute_scalar_product_of_landscapes make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 48%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -MF CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o.d -o CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp [ 48%] Linking CXX executable create_landscapes_on_grid cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -o create_landscapes_on_grid /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 48%] Built target create_landscapes_on_grid make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 49%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -MF CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o.d -o CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp [ 49%] Linking CXX executable plot_landscapes_on_grid cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -o plot_landscapes_on_grid /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 49%] Built target plot_landscapes_on_grid make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 49%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -MF CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o.d -o CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp [ 50%] Linking CXX executable average_landscapes_on_grid cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -o average_landscapes_on_grid /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 50%] Built target average_landscapes_on_grid make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 51%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -MF CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o.d -o CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp [ 51%] Linking CXX executable compute_distance_of_landscapes_on_grid cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -o compute_distance_of_landscapes_on_grid /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 51%] Built target compute_distance_of_landscapes_on_grid make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 51%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -MF CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o.d -o CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp [ 52%] Linking CXX executable compute_scalar_product_of_landscapes_on_grid cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -o compute_scalar_product_of_landscapes_on_grid /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 52%] Built target compute_scalar_product_of_landscapes_on_grid make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 53%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -MF CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o.d -o CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp [ 53%] Linking CXX executable create_persistence_vectors cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -o create_persistence_vectors /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 53%] Built target create_persistence_vectors make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 53%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -MF CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o.d -o CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp [ 54%] Linking CXX executable plot_persistence_vectors cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -o plot_persistence_vectors /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 54%] Built target plot_persistence_vectors make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 55%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -MF CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o.d -o CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp:11: In member function 'Gudhi::Persistence_representations::Vector_distances_in_diagram& Gudhi::Persistence_representations::Vector_distances_in_diagram::operator=(Gudhi::Persistence_representations::Vector_distances_in_diagram&&)', inlined from 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:13: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:54:7: warning: '*(__vector(2) long unsigned int*)((char*)& + offsetof(Gudhi::Persistence_representations::Vector_distances_in_diagram,Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_vectorization))' may be used uninitialized [-Wmaybe-uninitialized] 54 | class Vector_distances_in_diagram { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:15: note: '' declared here 492 | (*this) = Vector_distances_in_diagram(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'Gudhi::Persistence_representations::Vector_distances_in_diagram& Gudhi::Persistence_representations::Vector_distances_in_diagram::operator=(Gudhi::Persistence_representations::Vector_distances_in_diagram&&)', inlined from 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]' at /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:13: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:54:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::where_to_cut' may be used uninitialized [-Wmaybe-uninitialized] 54 | class Vector_distances_in_diagram { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Persistence_vectors.h:492:15: note: '' declared here 492 | (*this) = Vector_distances_in_diagram(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 55%] Linking CXX executable average_persistence_vectors cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -o average_persistence_vectors /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 55%] Built target average_persistence_vectors make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 55%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -MF CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o.d -o CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp [ 56%] Linking CXX executable compute_distance_of_persistence_vectors cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -o compute_distance_of_persistence_vectors /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 56%] Built target compute_distance_of_persistence_vectors make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 57%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -MF CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o.d -o CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp [ 57%] Linking CXX executable compute_scalar_product_of_persistence_vectors cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -o compute_scalar_product_of_persistence_vectors /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 57%] Built target compute_scalar_product_of_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 57%] Building CXX object example/Persistent_cohomology/CMakeFiles/plain_homology.dir/plain_homology.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/plain_homology.dir/plain_homology.cpp.o -MF CMakeFiles/plain_homology.dir/plain_homology.cpp.o.d -o CMakeFiles/plain_homology.dir/plain_homology.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/plain_homology.cpp [ 58%] Linking CXX executable plain_homology cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/plain_homology.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/plain_homology.dir/plain_homology.cpp.o -o plain_homology /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 58%] Built target plain_homology make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 58%] Building CXX object example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -MF CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o.d -o CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/persistence_from_simple_simplex_tree.cpp [ 59%] Linking CXX executable persistence_from_simple_simplex_tree cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/persistence_from_simple_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -o persistence_from_simple_simplex_tree /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 59%] Built target persistence_from_simple_simplex_tree make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 59%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -MF CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o.d -o CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/rips_persistence_step_by_step.cpp [ 60%] Linking CXX executable rips_persistence_step_by_step cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence_step_by_step.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -o rips_persistence_step_by_step /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 60%] Built target rips_persistence_step_by_step make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 60%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -MF CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o.d -o CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/rips_persistence_via_boundary_matrix.cpp [ 61%] Linking CXX executable rips_persistence_via_boundary_matrix cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence_via_boundary_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -o rips_persistence_via_boundary_matrix /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 61%] Built target rips_persistence_via_boundary_matrix make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 61%] Building CXX object example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -MF CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o.d -o CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/persistence_from_file.cpp [ 62%] Linking CXX executable persistence_from_file cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/persistence_from_file.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -o persistence_from_file /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 62%] Built target persistence_from_file make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 63%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -MF CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o.d -o CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/rips_multifield_persistence.cpp [ 63%] Linking CXX executable rips_multifield_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_multifield_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -o rips_multifield_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 63%] Built target rips_multifield_persistence make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 64%] Building CXX object example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o -MF CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o.d -o CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Persistent_cohomology/custom_persistence_sort.cpp [ 64%] Linking CXX executable custom_persistence_sort cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/custom_persistence_sort.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o -o custom_persistence_sort /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 64%] Built target custom_persistence_sort make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 65%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -MF CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o.d -o CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex/example_rips_complex_from_off_file.cpp [ 65%] Linking CXX executable Rips_complex_example_from_off cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -o Rips_complex_example_from_off /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 65%] Built target Rips_complex_example_from_off make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 65%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -MF CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o.d -o CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex/example_one_skeleton_rips_from_points.cpp [ 66%] Linking CXX executable Rips_complex_example_one_skeleton_from_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -o Rips_complex_example_one_skeleton_from_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 66%] Built target Rips_complex_example_one_skeleton_from_points make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 67%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -MF CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o.d -o CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp [ 67%] Linking CXX executable Rips_complex_example_one_skeleton_from_distance_matrix cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -o Rips_complex_example_one_skeleton_from_distance_matrix /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 67%] Built target Rips_complex_example_one_skeleton_from_distance_matrix make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 68%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -MF CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o.d -o CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp [ 68%] Linking CXX executable Rips_complex_example_from_csv_distance_matrix cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -o Rips_complex_example_from_csv_distance_matrix /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 68%] Built target Rips_complex_example_from_csv_distance_matrix make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 68%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -MF CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o.d -o CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex/example_sparse_rips.cpp [ 69%] Linking CXX executable Rips_complex_example_sparse cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_sparse.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -o Rips_complex_example_sparse /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 69%] Built target Rips_complex_example_sparse make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 69%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -MF CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o.d -o CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp [ 70%] Linking CXX executable Rips_complex_example_one_skeleton_rips_from_correlation_matrix cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -o Rips_complex_example_one_skeleton_rips_from_correlation_matrix /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 70%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 71%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -MF CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o.d -o CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex/rips_distance_matrix_persistence.cpp [ 71%] Linking CXX executable rips_distance_matrix_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_distance_matrix_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -o rips_distance_matrix_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 71%] Built target rips_distance_matrix_persistence make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 72%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Rips_complex/CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -MF CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o.d -o CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex/rips_persistence.cpp [ 72%] Linking CXX executable rips_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -o rips_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 72%] Built target rips_persistence make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 72%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -MF CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o.d -o CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp [ 72%] Linking CXX executable rips_correlation_matrix_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_correlation_matrix_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -o rips_correlation_matrix_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 72%] Built target rips_correlation_matrix_persistence make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 72%] Building CXX object utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -MF CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o.d -o CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Rips_complex/sparse_rips_persistence.cpp [ 73%] Linking CXX executable sparse_rips_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/sparse_rips_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -o sparse_rips_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 73%] Built target sparse_rips_persistence make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 74%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -MF CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o.d -o CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree/simplex_tree_from_cliques_of_graph.cpp [ 74%] Linking CXX executable Simplex_tree_example_from_cliques_of_graph cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -o Simplex_tree_example_from_cliques_of_graph /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 74%] Built target Simplex_tree_example_from_cliques_of_graph make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 74%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -MF CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o.d -o CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree/simple_simplex_tree.cpp [ 75%] Linking CXX executable Simplex_tree_example_simple_simplex_tree cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -o Simplex_tree_example_simple_simplex_tree /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 75%] Built target Simplex_tree_example_simple_simplex_tree make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 76%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -MF CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o.d -o CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree/mini_simplex_tree.cpp [ 76%] Linking CXX executable Simplex_tree_example_mini_simplex_tree cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -o Simplex_tree_example_mini_simplex_tree /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 76%] Built target Simplex_tree_example_mini_simplex_tree make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 76%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -MF CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o.d -o CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree/example_alpha_shapes_3_simplex_tree_from_off_file.cpp [ 77%] Linking CXX executable Simplex_tree_example_alpha_shapes_3_from_off cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -o Simplex_tree_example_alpha_shapes_3_from_off /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 77%] Built target Simplex_tree_example_alpha_shapes_3_from_off make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 77%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -MF CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o.d -o CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree/cech_complex_cgal_mini_sphere_3d.cpp [ 77%] Linking CXX executable Simplex_tree_example_cech_complex_cgal_mini_sphere_3d cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -o Simplex_tree_example_cech_complex_cgal_mini_sphere_3d /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 77%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 78%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -MF CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o.d -o CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Simplex_tree/graph_expansion_with_blocker.cpp [ 78%] Linking CXX executable Simplex_tree_example_graph_expansion_with_blocker cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -o Simplex_tree_example_graph_expansion_with_blocker /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 78%] Built target Simplex_tree_example_graph_expansion_with_blocker make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 78%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -MF CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o.d -o CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:11: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:375:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:196:31: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:176:27: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:54:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:199:32: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:176:27: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:54:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:567:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:199:32: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:176:27: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:54:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:142:60: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:106:34: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:259:26: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:77:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:56:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:69:14: required from 'Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Simplex_around_vertex_iterator(const Complex*, Vertex_handle) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Link = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior >; Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:226:7: required from 'Gudhi::skeleton_blocker::Simplex_iterator::Simplex_iterator(const Complex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:1434:32: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::complex_simplex_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Complex_simplex_range = boost::iterator_range > >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:39:57: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 79%] Linking CXX executable Skeleton_blocker_example_from_simplices cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_from_simplices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -o Skeleton_blocker_example_from_simplices /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 79%] Built target Skeleton_blocker_example_from_simplices make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 79%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -MF CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o.d -o CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:11: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:375:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:29:23: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:32:40: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:567:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:32:40: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:142:60: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:106:34: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:259:26: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:77:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:56:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:69:14: required from 'Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Simplex_around_vertex_iterator(const Complex*, Vertex_handle) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Link = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior >; Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:226:7: required from 'Gudhi::skeleton_blocker::Simplex_iterator::Simplex_iterator(const Complex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:1434:32: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::complex_simplex_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Complex_simplex_range = boost::iterator_range > >]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:61:57: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable Skeleton_blocker_example_iteration cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_iteration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -o Skeleton_blocker_example_iteration /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 80%] Built target Skeleton_blocker_example_iteration make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 80%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -MF CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o.d -o CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_link.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_link.cpp:11: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_link.cpp:46:93: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:375:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:157:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(size_t, Visitor*) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; size_t = long unsigned int; Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_link.cpp:29:11: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:546:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:557:17: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge(const Simplex&) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_simplifiable_complex.h:208:13: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_simplex(const Simplex&) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_link.cpp:33:22: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:142:60: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:106:34: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:259:26: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:65:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:894:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Link_complex Gudhi::skeleton_blocker::Skeleton_blocker_complex::link(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Link_complex = Gudhi::skeleton_blocker::Skeleton_blocker_link_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Skeleton_blocker/Skeleton_blocker_link.cpp:38:27: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable Skeleton_blocker_example_link cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_link.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -o Skeleton_blocker_example_link /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 80%] Built target Skeleton_blocker_example_link make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Spatial_searching /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Spatial_searching /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 81%] Building CXX object example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Spatial_searching && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -MF CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o.d -o CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Spatial_searching/example_spatial_searching.cpp [ 81%] Linking CXX executable Spatial_searching_example_spatial_searching cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Spatial_searching && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spatial_searching_example_spatial_searching.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -o Spatial_searching_example_spatial_searching /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 81%] Built target Spatial_searching_example_spatial_searching make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 81%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -MF CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o.d -o CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling/example_pick_n_random_points.cpp [ 82%] Linking CXX executable Subsampling_example_pick_n_random_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_pick_n_random_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -o Subsampling_example_pick_n_random_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 82%] Built target Subsampling_example_pick_n_random_points make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 83%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -MF CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o.d -o CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling/example_choose_n_farthest_points.cpp [ 83%] Linking CXX executable Subsampling_example_choose_n_farthest_points cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -o Subsampling_example_choose_n_farthest_points /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 83%] Built target Subsampling_example_choose_n_farthest_points make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 83%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -MF CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o.d -o CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling/example_sparsify_point_set.cpp [ 84%] Linking CXX executable Subsampling_example_sparsify_point_set cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_sparsify_point_set.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -o Subsampling_example_sparsify_point_set /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 84%] Built target Subsampling_example_sparsify_point_set make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 85%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/example_custom_distance.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Subsampling/CMakeFiles/Subsampling_example_custom_distance.dir/example_custom_distance.cpp.o -MF CMakeFiles/Subsampling_example_custom_distance.dir/example_custom_distance.cpp.o.d -o CMakeFiles/Subsampling_example_custom_distance.dir/example_custom_distance.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Subsampling/example_custom_distance.cpp [ 85%] Linking CXX executable Subsampling_example_custom_distance cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_custom_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Subsampling_example_custom_distance.dir/example_custom_distance.cpp.o -o Subsampling_example_custom_distance /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 85%] Built target Subsampling_example_custom_distance make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 85%] Building CXX object example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -MF CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o.d -o CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex/example_basic.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex/Simplicial_complex.h:16, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:16, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex/example_basic.cpp:1: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex/Simplicial_complex.h: In member function 'void Gudhi::tangential_complex::internal::Simplicial_complex::collapse(int, bool)': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex/Simplicial_complex.h:154:37: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, void>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 154 | GUDHI_CHECK(it_Cf->size() == max_simplex_dim + 1, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Debug_utils.h:23:44: note: in definition of macro 'GUDHI_CHECK' 23 | #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) | ^~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h: In instantiation of 'void Gudhi::tangential_complex::Tangential_complex::update_star(std::size_t) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1165:5: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangent_triangulation(std::size_t, bool) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:367:57: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangential_complex() [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex/example_basic.cpp:37:32: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1195:43: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, void>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1195 | GUDHI_CHECK(incident_simplex.size() == cur_dim_plus_1 - 1, /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Debug_utils.h:23:44: note: in definition of macro 'GUDHI_CHECK' 23 | #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) | ^~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h: In member function 'Gudhi::tangential_complex::Tangential_complex::Tr_vertex_handle Gudhi::tangential_complex::Tangential_complex::compute_star(std::size_t, const Point&, const Tangent_space_basis&, Triangulation&, bool) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1020:52: warning: '*(double*)((char*)&squared_star_sphere_radius_plus_margin + offsetof(std::optional,std::optional::.std::_Optional_base::))' may be used uninitialized [-Wmaybe-uninitialized] 1020 | if (squared_star_sphere_radius_plus_margin && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 1021 | k_sqdist(center_pt, neighbor_pt) > squared_star_sphere_radius_plus_margin.value()) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1004:23: note: '*(double*)((char*)&squared_star_sphere_radius_plus_margin + offsetof(std::optional,std::optional::.std::_Optional_base::))' was declared here 1004 | std::optional squared_star_sphere_radius_plus_margin = m_max_squared_edge_length; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Linking CXX executable Tangential_complex_example_basic cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tangential_complex_example_basic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -o Tangential_complex_example_basic /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 86%] Built target Tangential_complex_example_basic make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 86%] Building CXX object example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o -MF CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o.d -o CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex/example_with_perturb.cpp In file included from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex/Simplicial_complex.h:16, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:16, from /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex/example_with_perturb.cpp:1: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex/Simplicial_complex.h: In member function 'void Gudhi::tangential_complex::internal::Simplicial_complex::collapse(int, bool)': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex/Simplicial_complex.h:154:37: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, void>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 154 | GUDHI_CHECK(it_Cf->size() == max_simplex_dim + 1, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Debug_utils.h:23:44: note: in definition of macro 'GUDHI_CHECK' 23 | #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) | ^~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h: In instantiation of 'void Gudhi::tangential_complex::Tangential_complex::update_star(std::size_t) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1165:5: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangent_triangulation(std::size_t, bool) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = long unsigned int]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:367:57: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangential_complex() [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]' /build/gudhi-3.7.1+dfsg/build/userversion/example/Tangential_complex/example_with_perturb.cpp:44:32: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1195:43: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, void>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1195 | GUDHI_CHECK(incident_simplex.size() == cur_dim_plus_1 - 1, /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Debug_utils.h:23:44: note: in definition of macro 'GUDHI_CHECK' 23 | #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) | ^~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h: In member function 'Gudhi::tangential_complex::Tangential_complex::Tr_vertex_handle Gudhi::tangential_complex::Tangential_complex::compute_star(std::size_t, const Point&, const Tangent_space_basis&, Triangulation&, bool) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1020:52: warning: '*(double*)((char*)&squared_star_sphere_radius_plus_margin + offsetof(std::optional,std::optional::.std::_Optional_base::))' may be used uninitialized [-Wmaybe-uninitialized] 1020 | if (squared_star_sphere_radius_plus_margin && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 1021 | k_sqdist(center_pt, neighbor_pt) > squared_star_sphere_radius_plus_margin.value()) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Tangential_complex.h:1004:23: note: '*(double*)((char*)&squared_star_sphere_radius_plus_margin + offsetof(std::optional,std::optional::.std::_Optional_base::))' was declared here 1004 | std::optional squared_star_sphere_radius_plus_margin = m_max_squared_edge_length; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Linking CXX executable Tangential_complex_example_with_perturb cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tangential_complex_example_with_perturb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o -o Tangential_complex_example_with_perturb /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 86%] Built target Tangential_complex_example_with_perturb make -f example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/build.make example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Toplex_map /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Toplex_map /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/build.make example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 87%] Building CXX object example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/simple_toplex_map.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Toplex_map && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Toplex_map/CMakeFiles/Toplex_map_example_simple_toplex_map.dir/simple_toplex_map.cpp.o -MF CMakeFiles/Toplex_map_example_simple_toplex_map.dir/simple_toplex_map.cpp.o.d -o CMakeFiles/Toplex_map_example_simple_toplex_map.dir/simple_toplex_map.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Toplex_map/simple_toplex_map.cpp [ 87%] Linking CXX executable Toplex_map_example_simple_toplex_map cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Toplex_map && /usr/bin/cmake -E cmake_link_script CMakeFiles/Toplex_map_example_simple_toplex_map.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Toplex_map_example_simple_toplex_map.dir/simple_toplex_map.cpp.o -o Toplex_map_example_simple_toplex_map /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 87%] Built target Toplex_map_example_simple_toplex_map make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 87%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -MF CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o.d -o CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex/example_nearest_landmark_table.cpp [ 88%] Linking CXX executable Witness_complex_example_nearest_landmark_table cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -o Witness_complex_example_nearest_landmark_table /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 88%] Built target Witness_complex_example_nearest_landmark_table make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 88%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -MF CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o.d -o CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex/example_witness_complex_off.cpp [ 89%] Linking CXX executable Witness_complex_example_off cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -o Witness_complex_example_off /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 89%] Built target Witness_complex_example_off make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 89%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -MF CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o.d -o CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex/example_witness_complex_sphere.cpp [ 90%] Linking CXX executable Witness_complex_example_sphere cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_sphere.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -o Witness_complex_example_sphere /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 90%] Built target Witness_complex_example_sphere make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 90%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -MF CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o.d -o CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Witness_complex/example_strong_witness_complex_off.cpp [ 91%] Linking CXX executable Witness_complex_example_strong_off cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_strong_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -o Witness_complex_example_strong_off /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 91%] Built target Witness_complex_example_strong_off make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 91%] Building CXX object utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -MF CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o.d -o CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Witness_complex/strong_witness_persistence.cpp [ 91%] Linking CXX executable Witness_complex_strong_witness_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_strong_witness_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -o Witness_complex_strong_witness_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 91%] Built target Witness_complex_strong_witness_persistence make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 92%] Building CXX object utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -MF CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o.d -o CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Witness_complex/weak_witness_persistence.cpp [ 92%] Linking CXX executable Witness_complex_weak_witness_persistence cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_weak_witness_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -o Witness_complex_weak_witness_persistence /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 92%] Built target Witness_complex_weak_witness_persistence make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 92%] Building CXX object example/Nerve_GIC/CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Nerve_GIC/CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -MF CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o.d -o CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Nerve_GIC/CoordGIC.cpp [ 93%] Linking CXX executable CoordGIC cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/CoordGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -o CoordGIC /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 93%] Built target CoordGIC make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/example/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 93%] Building CXX object example/Nerve_GIC/CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT example/Nerve_GIC/CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -MF CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o.d -o CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/example/Nerve_GIC/FuncGIC.cpp [ 94%] Linking CXX executable FuncGIC cd /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/FuncGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -o FuncGIC /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 94%] Built target FuncGIC make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 95%] Building CXX object utilities/Nerve_GIC/CMakeFiles/Nerve.dir/Nerve.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Nerve_GIC/CMakeFiles/Nerve.dir/Nerve.cpp.o -MF CMakeFiles/Nerve.dir/Nerve.cpp.o.d -o CMakeFiles/Nerve.dir/Nerve.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Nerve_GIC/Nerve.cpp [ 95%] Linking CXX executable Nerve cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/Nerve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/Nerve.dir/Nerve.cpp.o -o Nerve /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 95%] Built target Nerve make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 96%] Building CXX object utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++17 -MD -MT utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -MF CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o.d -o CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/utilities/Nerve_GIC/VoronoiGIC.cpp [ 96%] Linking CXX executable VoronoiGIC cd /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/VoronoiGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -o VoronoiGIC /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 96%] Built target VoronoiGIC make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 96%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.25/Modules/CMakeCXXCompilerABI.cpp -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include AutoGen: Parsing "SRC:/GudhUI/gui/MainWindow.h" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_edge_contraction.h" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_k_nearest_neighbors.cpp" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_uniform_neighbors.h" AutoGen: Parsing "SRC:/GudhUI/view/Viewer.h" AutoGen: Parsing "SRC:/GudhUI/view/Viewer_instructor.h" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_persistence.h" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_persistence.cpp" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_uniform_neighbors.cpp" AutoGen: Parsing "SRC:/GudhUI/view/Viewer_instructor.cpp" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_k_nearest_neighbors.h" AutoGen: Parsing "SRC:/GudhUI/gui/gudhui.cpp" AutoGen: Parsing "SRC:/GudhUI/gui/MainWindow.cpp" AutoGen: Parsing "SRC:/GudhUI/gui/Menu_edge_contraction.cpp" AutoGen: Parsing "SRC:/GudhUI/view/Viewer.cpp" AutoMoc warning --------------- "SRC:/GudhUI/gui/MainWindow.cpp" includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc warning --------------- "SRC:/GudhUI/gui/Menu_edge_contraction.cpp" includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc warning --------------- "SRC:/GudhUI/gui/Menu_k_nearest_neighbors.cpp" includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc warning --------------- "SRC:/GudhUI/gui/Menu_persistence.cpp" includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc warning --------------- "SRC:/GudhUI/gui/Menu_uniform_neighbors.cpp" includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc warning --------------- "SRC:/GudhUI/view/Viewer.cpp" includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc warning --------------- "SRC:/GudhUI/view/Viewer_instructor.cpp" includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp", because it doesn't exist, from "SRC:/GudhUI/gui/MainWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_edge_contraction.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_edge_contraction.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_k_nearest_neighbors.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_k_nearest_neighbors.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_persistence.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_persistence.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_uniform_neighbors.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_uniform_neighbors.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp", because it doesn't exist, from "SRC:/GudhUI/view/Viewer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp", because it doesn't exist, from "SRC:/GudhUI/view/Viewer_instructor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.h AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/MainWindow.moc", because it doesn't exist, from "SRC:/GudhUI/gui/MainWindow.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/MainWindow.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.cpp AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_edge_contraction.moc", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_edge_contraction.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/Menu_edge_contraction.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_edge_contraction.cpp AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_k_nearest_neighbors.moc", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_k_nearest_neighbors.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/Menu_k_nearest_neighbors.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_k_nearest_neighbors.cpp AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_persistence.moc", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_persistence.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/Menu_persistence.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_persistence.cpp AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_uniform_neighbors.moc", because it doesn't exist, from "SRC:/GudhUI/gui/Menu_uniform_neighbors.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/Menu_uniform_neighbors.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_uniform_neighbors.cpp AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/Viewer.moc", because it doesn't exist, from "SRC:/GudhUI/view/Viewer.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/Viewer.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.cpp AutoMoc: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/Viewer_instructor.moc", because it doesn't exist, from "SRC:/GudhUI/view/Viewer_instructor.cpp" /usr/lib/qt5/bin/moc -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include --include /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/moc_predefs.h --output-dep-file -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/Viewer_instructor.moc /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp AutoUic: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/ui_KNearestNeighborsMenu.h", because it doesn't exist, from "SRC:/GudhUI/gui/KNearestNeighborsMenu.ui" /usr/lib/qt5/bin/uic -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_KNearestNeighborsMenu.h /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/KNearestNeighborsMenu.ui AutoUic: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/ui_MenuEdgeContraction.h", because it doesn't exist, from "SRC:/GudhUI/gui/MenuEdgeContraction.ui" /usr/lib/qt5/bin/uic -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_MenuEdgeContraction.h /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MenuEdgeContraction.ui AutoUic: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/ui_PersistenceMenu.h", because it doesn't exist, from "SRC:/GudhUI/gui/PersistenceMenu.ui" /usr/lib/qt5/bin/uic -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_PersistenceMenu.h /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/PersistenceMenu.ui AutoUic: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/ui_UniformNeighborsMenu.h", because it doesn't exist, from "SRC:/GudhUI/gui/UniformNeighborsMenu.ui" /usr/lib/qt5/bin/uic -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_UniformNeighborsMenu.h /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/UniformNeighborsMenu.ui AutoUic: Generating "SRC:/build/GudhUI/GudhUI_autogen/include/ui_main_window.h", because it doesn't exist, from "SRC:/GudhUI/gui/main_window.ui" /usr/lib/qt5/bin/uic -o /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_main_window.h /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/main_window.ui AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_uniform_neighbors.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_uniform_neighbors.moc.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_persistence.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_persistence.moc.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_k_nearest_neighbors.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_k_nearest_neighbors.moc.d" AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/Viewer.moc.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/MainWindow.moc.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/Viewer_instructor.moc.d" AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp.d" AutoMoc: /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_edge_contraction.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/include/Menu_edge_contraction.moc.d" AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp.d" AutoMoc: Reading dependencies from "SRC:/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenUsed.txt" make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 96%] Built target GudhUI_autogen make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [ 96%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o -MF CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Complex_typedefs.h:15, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.h:19, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/../../../../GudhUI/gui/MainWindow.h:18, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:10, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp:2: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:209:44: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:111:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:110:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:50:45: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:35:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:164:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o -MF CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o.d -o CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/gudhui.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Complex_typedefs.h:15, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.h:19, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.h:18, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/gudhui.cpp:11: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:209:44: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:111:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:110:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:50:45: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:35:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:164:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o -MF CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o.d -o CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Complex_typedefs.h:15, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.h:19, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.h:18, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.cpp:11: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:209:44: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:111:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:110:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:50:45: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:35:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:164:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o -MF CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o.d -o CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_k_nearest_neighbors.cpp [ 98%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o -MF CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o.d -o CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_uniform_neighbors.cpp [ 98%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o -MF CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o.d -o CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_edge_contraction.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Complex_typedefs.h:15, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.h:19, from /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/MainWindow.h:18, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_edge_contraction.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_edge_contraction.cpp:14: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:209:44: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:111:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:407:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:110:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:103:38: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:573:41: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Vertex_handle, Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Edge_handle = boost::detail::edge_desc_impl; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:50:45: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/utils/Rips_builder.h:35:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Model.h:164:55: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 99%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o -MF CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o.d -o CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/gui/Menu_persistence.cpp [ 99%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o -MF CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o.d -o CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:27, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:25, from /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:14, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/model/Complex_typedefs.h:15, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.h:23, from /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp:13: /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_geometric_complex.h:103:19: required from 'const Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Vertex_handle) const [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Point = CGAL::Point_d >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp:42:33: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:364:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 364 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:375:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:157:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(size_t, Visitor*) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; size_t = long unsigned int; Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h:46:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:56:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:48:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:127:7: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:1377:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp:111:46: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:354:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 354 | 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:127:49: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:259:26: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:77:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:56:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:48:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:127:7: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:1377:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp:111:46: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:444:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 444 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:142:60: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:106:34: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:259:26: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_link_complex.h:77:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:56:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:48:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:127:7: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:1377:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer_instructor.cpp:111:46: required from here /build/gudhi-3.7.1+dfsg/build/userversion/include/gudhi/Skeleton_blocker_complex.h:469:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'long unsigned int'} [-Wsign-compare] 469 | assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/view/Viewer.cpp.o cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMPXX=1 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/GudhUI -I/build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI/GudhUI_autogen/include -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/build/gudhi-3.7.1+dfsg/build/userversion/build -I/build/gudhi-3.7.1+dfsg/build/userversion/include -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++17 -MD -MT GudhUI/CMakeFiles/GudhUI.dir/view/Viewer.cpp.o -MF CMakeFiles/GudhUI.dir/view/Viewer.cpp.o.d -o CMakeFiles/GudhUI.dir/view/Viewer.cpp.o -c /build/gudhi-3.7.1+dfsg/build/userversion/GudhUI/view/Viewer.cpp [100%] Linking CXX executable GudhUI cd /build/gudhi-3.7.1+dfsg/build/userversion/build/GudhUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/GudhUI.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o CMakeFiles/GudhUI.dir/view/Viewer.cpp.o -o GudhUI /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.8 /usr/lib/x86_64-linux-gnu/libQt5OpenGL.so.5.15.8 /usr/lib/x86_64-linux-gnu/libQGLViewer-qt5.so /usr/lib/x86_64-linux-gnu/libGL.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libgmpxx.so /usr/lib/x86_64-linux-gnu/libmpfr.so /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.8 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.8 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.8 make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' [100%] Built target GudhUI make[3]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build/userversion/build/CMakeFiles 0 make[2]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' for py3ver in 3.11 ; do \ cd build-py$py3ver/userversion/build/python ; \ /usr/bin/python$py3ver setup.py build ; \ done /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/off_utils.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/rips_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/cubical_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/periodic_cubical_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/reader_utils.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/witness_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/strong_witness_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/nerve_gic.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/subsampling.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/tangential_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_witness_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_strong_witness_complex.pyx because it changed. Compiling /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/alpha_complex.pyx because it changed. [ 1/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/alpha_complex.pyx [ 2/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/cubical_complex.pyx [ 3/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_strong_witness_complex.pyx [ 4/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_witness_complex.pyx [ 5/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/nerve_gic.pyx [ 6/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/off_utils.pyx [ 7/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/periodic_cubical_complex.pyx [ 8/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/reader_utils.pyx [ 9/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/rips_complex.pyx [10/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.pyx [11/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/strong_witness_complex.pyx [12/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/subsampling.pyx [13/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/tangential_complex.pyx [14/14] Cythonizing /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/witness_complex.pyx running build running build_py creating build creating build/lib.linux-x86_64-cpython-311 creating build/lib.linux-x86_64-cpython-311/gudhi copying gudhi/dtm_rips_complex.py -> build/lib.linux-x86_64-cpython-311/gudhi copying gudhi/weighted_rips_complex.py -> build/lib.linux-x86_64-cpython-311/gudhi copying gudhi/persistence_graphical_tools.py -> build/lib.linux-x86_64-cpython-311/gudhi copying gudhi/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi creating build/lib.linux-x86_64-cpython-311/gudhi/sklearn copying gudhi/sklearn/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/sklearn copying gudhi/sklearn/cubical_persistence.py -> build/lib.linux-x86_64-cpython-311/gudhi/sklearn creating build/lib.linux-x86_64-cpython-311/gudhi/datasets copying gudhi/datasets/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/datasets copying gudhi/datasets/remote.py -> build/lib.linux-x86_64-cpython-311/gudhi/datasets creating build/lib.linux-x86_64-cpython-311/gudhi/hera copying gudhi/hera/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/hera creating build/lib.linux-x86_64-cpython-311/gudhi/clustering copying gudhi/clustering/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/clustering copying gudhi/clustering/tomato.py -> build/lib.linux-x86_64-cpython-311/gudhi/clustering creating build/lib.linux-x86_64-cpython-311/gudhi/point_cloud copying gudhi/point_cloud/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/point_cloud copying gudhi/point_cloud/dtm.py -> build/lib.linux-x86_64-cpython-311/gudhi/point_cloud copying gudhi/point_cloud/knn.py -> build/lib.linux-x86_64-cpython-311/gudhi/point_cloud copying gudhi/point_cloud/timedelay.py -> build/lib.linux-x86_64-cpython-311/gudhi/point_cloud creating build/lib.linux-x86_64-cpython-311/gudhi/tensorflow copying gudhi/tensorflow/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/tensorflow copying gudhi/tensorflow/cubical_layer.py -> build/lib.linux-x86_64-cpython-311/gudhi/tensorflow copying gudhi/tensorflow/lower_star_simplex_tree_layer.py -> build/lib.linux-x86_64-cpython-311/gudhi/tensorflow copying gudhi/tensorflow/rips_layer.py -> build/lib.linux-x86_64-cpython-311/gudhi/tensorflow creating build/lib.linux-x86_64-cpython-311/gudhi/wasserstein copying gudhi/wasserstein/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/wasserstein copying gudhi/wasserstein/barycenter.py -> build/lib.linux-x86_64-cpython-311/gudhi/wasserstein copying gudhi/wasserstein/wasserstein.py -> build/lib.linux-x86_64-cpython-311/gudhi/wasserstein creating build/lib.linux-x86_64-cpython-311/gudhi/representations copying gudhi/representations/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/representations copying gudhi/representations/kernel_methods.py -> build/lib.linux-x86_64-cpython-311/gudhi/representations copying gudhi/representations/metrics.py -> build/lib.linux-x86_64-cpython-311/gudhi/representations copying gudhi/representations/preprocessing.py -> build/lib.linux-x86_64-cpython-311/gudhi/representations copying gudhi/representations/vector_methods.py -> build/lib.linux-x86_64-cpython-311/gudhi/representations creating build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators copying gudhi/datasets/generators/__init__.py -> build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators copying gudhi/datasets/generators/points.py -> build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators running build_ext building 'gudhi.off_utils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/build creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11 creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/off_utils.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/off_utils.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/off_utils.cpython-311-x86_64-linux-gnu.so building 'gudhi.simplex_tree' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.cpp In file included from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.cpp:833: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h: In instantiation of 'Gudhi::Persistent_cohomology_interface::Generators Gudhi::Persistent_cohomology_interface::lower_star_generators() [with FilteredComplex = Gudhi::Simplex_tree_interface; Generators = std::pair >, std::vector > >]': /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.cpp:10225:61: required from here /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h:159:31: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 159 | while(diagsinf.size() < dim+1) diagsinf.emplace_back(); | ~~~~~~~~~~~~~~~~^~~~~~~ /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h:162:28: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 162 | while(diags.size() < dim+1) diags.emplace_back(); | ~~~~~~~~~~~~~^~~~~~~ /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h: In instantiation of 'Gudhi::Persistent_cohomology_interface::Generators Gudhi::Persistent_cohomology_interface::flag_generators() [with FilteredComplex = Gudhi::Simplex_tree_interface; Generators = std::pair >, std::vector > >]': /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.cpp:10441:55: required from here /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h:196:33: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 196 | while(diagsinf.size() < dim+1) diagsinf.emplace_back(); | ~~~~~~~~~~~~~~~~^~~~~~~ /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h:219:30: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 219 | while(diags.size() < dim+1) diags.emplace_back(); | ~~~~~~~~~~~~~^~~~~~~ INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/simplex_tree.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/simplex_tree.cpython-311-x86_64-linux-gnu.so building 'gudhi.rips_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/rips_complex.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/rips_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/rips_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.cubical_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/cubical_complex.cpp In file included from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h:14, from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/cubical_complex.cpp:832: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Persistent_cohomology.h: In instantiation of 'std::vector > Gudhi::persistent_cohomology::Persistent_cohomology::intervals_in_dimension(int) [with FilteredComplex = Gudhi::cubical_complex::Cubical_complex_interface<>; CoefficientField = Gudhi::persistent_cohomology::Field_Zp; typename FilteredComplex::Filtration_value = double]': /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/cubical_complex.cpp:4558:129: required from here /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Persistent_cohomology.h:685:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 685 | if (cpx_->dimension(get<0>(pair)) == dimension) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/cubical_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/cubical_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.periodic_cubical_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/periodic_cubical_complex.cpp In file included from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Persistent_cohomology_interface.h:14, from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/periodic_cubical_complex.cpp:832: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Persistent_cohomology.h: In instantiation of 'std::vector > Gudhi::persistent_cohomology::Persistent_cohomology::intervals_in_dimension(int) [with FilteredComplex = Gudhi::cubical_complex::Cubical_complex_interface >; CoefficientField = Gudhi::persistent_cohomology::Field_Zp; typename FilteredComplex::Filtration_value = double]': /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/periodic_cubical_complex.cpp:4608:129: required from here /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Persistent_cohomology.h:685:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 685 | if (cpx_->dimension(get<0>(pair)) == dimension) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/periodic_cubical_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/periodic_cubical_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.reader_utils' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/reader_utils.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/reader_utils.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/reader_utils.cpython-311-x86_64-linux-gnu.so building 'gudhi.witness_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/witness_complex.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/witness_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/witness_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.strong_witness_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/strong_witness_complex.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/strong_witness_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/strong_witness_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.nerve_gic' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/nerve_gic.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/nerve_gic.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/nerve_gic.cpython-311-x86_64-linux-gnu.so building 'gudhi.subsampling' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/subsampling.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/subsampling.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/subsampling.cpython-311-x86_64-linux-gnu.so building 'gudhi.tangential_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/tangential_complex.cpp In file included from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/Tangential_complex_interface.h:15, from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/tangential_complex.cpp:833: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Tangential_complex.h: In member function 'Gudhi::tangential_complex::Tangential_complex::Tr_vertex_handle Gudhi::tangential_complex::Tangential_complex::compute_star(std::size_t, const Point&, const Tangent_space_basis&, Triangulation&, bool) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]': /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Tangential_complex.h:1020:52: warning: '*(double*)((char*)&squared_star_sphere_radius_plus_margin + offsetof(std::optional,std::optional::.std::_Optional_base::))' may be used uninitialized [-Wmaybe-uninitialized] 1020 | if (squared_star_sphere_radius_plus_margin && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 1021 | k_sqdist(center_pt, neighbor_pt) > squared_star_sphere_radius_plus_margin.value()) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include/gudhi/Tangential_complex.h:1004:23: note: '*(double*)((char*)&squared_star_sphere_radius_plus_margin + offsetof(std::optional,std::optional::.std::_Optional_base::))' was declared here 1004 | std::optional squared_star_sphere_radius_plus_margin = m_max_squared_edge_length; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/tangential_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/tangential_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.euclidean_witness_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_witness_complex.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_witness_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/euclidean_witness_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.euclidean_strong_witness_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_strong_witness_complex.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/euclidean_strong_witness_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/euclidean_strong_witness_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.alpha_complex' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/alpha_complex.cpp INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/alpha_complex.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/alpha_complex.cpython-311-x86_64-linux-gnu.so building 'gudhi.clustering._tomato' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/clustering INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR -fvisibility=hidden' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/clustering/_tomato.cc INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/clustering/_tomato.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/clustering/_tomato.cpython-311-x86_64-linux-gnu.so building 'gudhi.hera.wasserstein' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR -fvisibility=hidden' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/wasserstein.cc INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/wasserstein.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/hera/wasserstein.cpython-311-x86_64-linux-gnu.so building 'gudhi.hera.bottleneck' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR -fvisibility=hidden' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/bottleneck.cc In file included from /usr/include/boost/bind.hpp:30, from /usr/include/hera/bottleneck/dnn/geometry/../parallel/tbb.h:11, from /usr/include/hera/bottleneck/dnn/geometry/euclidean-fixed.h:15, from /usr/include/hera/bottleneck/neighb_oracle.h:37, from /usr/include/hera/bottleneck/bound_match.h:36, from /usr/include/hera/bottleneck/bottleneck_detail.h:41, from /usr/include/hera/bottleneck/bottleneck.h:41, from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/bottleneck.cc:19: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/bottleneck.cc:11: In lambda function, inlined from 'R boost::range_detail::default_constructible_unary_fn_wrapper::operator()(const Arg&) const [with Arg = long int; F = pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::; R = std::pair]' at /usr/include/boost/range/detail/default_constructible_unary_fn.hpp:56:25, inlined from 'typename boost::iterators::detail::transform_iterator_base::type::reference boost::iterators::transform_iterator::dereference() const [with UnaryFunc = boost::range_detail::default_constructible_unary_fn_wrapper, std::pair >; Iterator = boost::iterators::counting_iterator; Reference = boost::use_default; Value = boost::use_default]' at /usr/include/boost/iterator/transform_iterator.hpp:126:17, inlined from 'static typename Facade::reference boost::iterators::iterator_core_access::dereference(const Facade&) [with Facade = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>]' at /usr/include/boost/iterator/iterator_facade.hpp:550:31, inlined from 'boost::iterators::detail::iterator_facade_base::reference boost::iterators::detail::iterator_facade_base::operator*() const [with Derived = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Value = std::pair; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = std::pair; Difference = long int]' at /usr/include/boost/iterator/iterator_facade.hpp:656:53, inlined from 'boost::iterators::detail::iterator_facade_base::pointer boost::iterators::detail::iterator_facade_base::operator->() const [with Derived = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Value = std::pair; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = std::pair; Difference = long int]' at /usr/include/boost/iterator/iterator_facade.hpp:661:52, inlined from 'void hera::bt::DiagramPointSet::fillIn(PairIterator, PairIterator) [with PairIterator = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Real_ = double]' at /usr/include/hera/bottleneck/basic_defs_bt.h:431:50, inlined from 'hera::bt::DiagramPointSet::DiagramPointSet(PairIterator, PairIterator) [with PairIterator = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Real_ = double]' at /usr/include/hera/bottleneck/basic_defs_bt.h:455:23, inlined from 'typename hera::DiagramTraits::RealType hera::bottleneckDistApprox(PairContainer&, PairContainer&, typename DiagramTraits::RealType, bt::MatchingEdge::RealType>&, bool) [with PairContainer = boost::range_detail::transformed_range, boost::iterator_range > >]' at /usr/include/hera/bottleneck/bottleneck.h:136:41, inlined from 'typename hera::DiagramTraits::RealType hera::bottleneckDistApprox(PairContainer&, PairContainer&, typename DiagramTraits::RealType) [with PairContainer = boost::range_detail::transformed_range, boost::iterator_range > >]' at /usr/include/hera/bottleneck/bottleneck.h:147:42, inlined from 'double bottleneck_distance(Dgm, Dgm, double)' at /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/bottleneck.cc:32:38: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/pybind11_diagram_utils.h:24:27: warning: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::' may be used uninitialized [-Wmaybe-uninitialized] 24 | char* death = birth + w; | ^ In file included from /usr/include/hera/bottleneck/bottleneck_detail.h:40: /usr/include/hera/bottleneck/basic_defs_bt.h: In function 'double bottleneck_distance(Dgm, Dgm, double)': /usr/include/hera/bottleneck/basic_defs_bt.h:430:27: note: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::' was declared here 430 | for (auto iter = begin_iter; iter != end_iter; ++iter) { | ^~~~ /usr/include/hera/bottleneck/basic_defs_bt.h:430:27: warning: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::' may be used uninitialized [-Wmaybe-uninitialized] /usr/include/hera/bottleneck/basic_defs_bt.h:430:27: warning: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::

' may be used uninitialized [-Wmaybe-uninitialized] In lambda function, inlined from 'R boost::range_detail::default_constructible_unary_fn_wrapper::operator()(const Arg&) const [with Arg = long int; F = pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::; R = std::pair]' at /usr/include/boost/range/detail/default_constructible_unary_fn.hpp:56:25, inlined from 'typename boost::iterators::detail::transform_iterator_base::type::reference boost::iterators::transform_iterator::dereference() const [with UnaryFunc = boost::range_detail::default_constructible_unary_fn_wrapper, std::pair >; Iterator = boost::iterators::counting_iterator; Reference = boost::use_default; Value = boost::use_default]' at /usr/include/boost/iterator/transform_iterator.hpp:126:17, inlined from 'static typename Facade::reference boost::iterators::iterator_core_access::dereference(const Facade&) [with Facade = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>]' at /usr/include/boost/iterator/iterator_facade.hpp:550:31, inlined from 'boost::iterators::detail::iterator_facade_base::reference boost::iterators::detail::iterator_facade_base::operator*() const [with Derived = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Value = std::pair; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = std::pair; Difference = long int]' at /usr/include/boost/iterator/iterator_facade.hpp:656:53, inlined from 'boost::iterators::detail::iterator_facade_base::pointer boost::iterators::detail::iterator_facade_base::operator->() const [with Derived = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Value = std::pair; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = std::pair; Difference = long int]' at /usr/include/boost/iterator/iterator_facade.hpp:661:52, inlined from 'void hera::bt::DiagramPointSet::fillIn(PairIterator, PairIterator) [with PairIterator = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Real_ = double]' at /usr/include/hera/bottleneck/basic_defs_bt.h:431:50, inlined from 'hera::bt::DiagramPointSet::DiagramPointSet(PairIterator, PairIterator) [with PairIterator = boost::iterators::transform_iterator, std::pair >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>; Real_ = double]' at /usr/include/hera/bottleneck/basic_defs_bt.h:455:23, inlined from 'typename hera::DiagramTraits::RealType hera::bottleneckDistApprox(PairContainer&, PairContainer&, typename DiagramTraits::RealType, bt::MatchingEdge::RealType>&, bool) [with PairContainer = boost::range_detail::transformed_range, boost::iterator_range > >]' at /usr/include/hera/bottleneck/bottleneck.h:135:41, inlined from 'typename hera::DiagramTraits::RealType hera::bottleneckDistApprox(PairContainer&, PairContainer&, typename DiagramTraits::RealType) [with PairContainer = boost::range_detail::transformed_range, boost::iterator_range > >]' at /usr/include/hera/bottleneck/bottleneck.h:147:42, inlined from 'double bottleneck_distance(Dgm, Dgm, double)' at /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/bottleneck.cc:32:38: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include/pybind11_diagram_utils.h:24:27: warning: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::' may be used uninitialized [-Wmaybe-uninitialized] 24 | char* death = birth + w; | ^ /usr/include/hera/bottleneck/basic_defs_bt.h: In function 'double bottleneck_distance(Dgm, Dgm, double)': /usr/include/hera/bottleneck/basic_defs_bt.h:430:27: note: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::' was declared here 430 | for (auto iter = begin_iter; iter != end_iter; ++iter) { | ^~~~ /usr/include/hera/bottleneck/basic_defs_bt.h:430:27: warning: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::' may be used uninitialized [-Wmaybe-uninitialized] /usr/include/hera/bottleneck/basic_defs_bt.h:430:27: warning: '*(const pairify::._anon_274*)((char*)&iter + offsetof(boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>,boost::iterators::transform_iterator >, boost::iterators::counting_iterator, boost::use_default, boost::use_default>::m_f.boost::range_detail::default_constructible_unary_fn_wrapper >::m_impl.boost::optional::.boost::optional_detail::optional_base::m_storage.boost::optional_detail::aligned_storage::dummy_)).pairify(void*, pybind11::ssize_t, pybind11::ssize_t)::::

' may be used uninitialized [-Wmaybe-uninitialized] INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/hera/bottleneck.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/hera/bottleneck.cpython-311-x86_64-linux-gnu.so building 'gudhi.datasets.generators._points' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/datasets creating build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/datasets/generators INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR -fvisibility=hidden' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/datasets/generators/_points.cc INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/datasets/generators/_points.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators/_points.cpython-311-x86_64-linux-gnu.so building 'gudhi.bottleneck' extension INFO: C compiler: x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC INFO: compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/ -I/usr/include/hera/bottleneck -I/usr/include/hera/wasserstein -I/usr/include -I/usr/include/x86_64-linux-gnu -I/usr/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/build -I/usr/include -I/usr/include/eigen3 -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/include -I/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/lib/python3/dist-packages/pybind11/include -I/usr/include/python3.11 -c' extra options: '-DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++17 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_MPFR -fvisibility=hidden' INFO: x86_64-linux-gnu-gcc: /build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/bottleneck.cc INFO: x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-3.7.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/build/gudhi-3.7.1+dfsg/build-py3.11/userversion/python/gudhi/bottleneck.o -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lgmp -lgmpxx -lmpfr -o build/lib.linux-x86_64-cpython-311/gudhi/bottleneck.cpython-311-x86_64-linux-gnu.so make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' cd build/userversion/build ; \ make doxygen make[2]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg/build/userversion -B/build/gudhi-3.7.1+dfsg/build/userversion/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 doxygen make[3]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg/build/userversion -B/build/gudhi-3.7.1+dfsg/build/userversion/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build/userversion/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 CMakeFiles/doxygen.dir/all make[4]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f CMakeFiles/doxygen.dir/build.make CMakeFiles/doxygen.dir/depend make[5]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' cd /build/gudhi-3.7.1+dfsg/build/userversion/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build /build/gudhi-3.7.1+dfsg/build/userversion/build/CMakeFiles/doxygen.dir/DependInfo.cmake --color= make[5]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make -f CMakeFiles/doxygen.dir/build.make CMakeFiles/doxygen.dir/build make[5]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' Generating API documentation with Doxygen in 'html' directory /usr/bin/doxygen /build/gudhi-3.7.1+dfsg/build/userversion/build/Doxyfile warning: ignoring unsupported tag 'HTML_COLORSTYLE' at line 1196, file /build/gudhi-3.7.1+dfsg/build/userversion/build/Doxyfile warning: ignoring unsupported tag 'DOT_COMMON_ATTR' at line 2182, file /build/gudhi-3.7.1+dfsg/build/userversion/build/Doxyfile warning: ignoring unsupported tag 'DOT_EDGE_ATTR' at line 2191, file /build/gudhi-3.7.1+dfsg/build/userversion/build/Doxyfile warning: ignoring unsupported tag 'DOT_NODE_ATTR' at line 2199, file /build/gudhi-3.7.1+dfsg/build/userversion/build/Doxyfile error opening bib1289814.bbl: No such file or directory bibtex command failed: No such file or directory make[5]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' Built target doxygen make[4]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-3.7.1+dfsg/build/userversion/build/CMakeFiles 0 make[3]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make[2]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_auto_test --buildsystem=cmake --no-parallel --no-parallel --sourcedir=build/userversion --builddirectory=build/userversion/build cd build/userversion/build && make -j1 test ARGS\+=--verbose ARGS\+=-j1 make[2]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j1 UpdateCTestConfiguration from :/build/gudhi-3.7.1+dfsg/build/userversion/build/DartConfiguration.tcl UpdateCTestConfiguration from :/build/gudhi-3.7.1+dfsg/build/userversion/build/DartConfiguration.tcl Test project /build/gudhi-3.7.1+dfsg/build/userversion/build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: Common_example_vector_double_off_reader 1: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/vector_double_off_reader "alphacomplexdoc.off" 1: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common 1: Test timeout computed to be: 10000000 1/140 Test #1: Common_example_vector_double_off_reader ..................................................... Passed 0.07 sec test 2 Start 2: Common_example_vector_double_off_reader_diff_files 2: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/vectordoubleoffreader_result.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/alphacomplexdoc.off.txt" 2: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common 2: Test timeout computed to be: 10000000 2/140 Test #2: Common_example_vector_double_off_reader_diff_files .......................................... Passed 0.01 sec test 3 Start 3: Common_example_vector_cgal_3D_off_reader 3: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/cgal_3D_off_reader "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" 3: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common 3: Test timeout computed to be: 10000000 3: Point[1] = (0.959535, -0.418347, 0.302237) 3: Point[2] = (2.16795, 1.85348, -0.52312) 3: Point[3] = (-2.38753, -1.50911, -0.565889) 3: Point[4] = (-2.70428, -1.25688, 0.188394) 3: Point[5] = (-1.22932, -1.64337, -0.998632) 3: Point[6] = (-0.541061, 0.874318, -0.235773) 3: Point[7] = (-0.680896, -1.18448, 0.773528) 3: Point[8] = (0.307818, 1.45004, 0.855593) 3: Point[9] = (0.168334, -1.04004, 0.322931) 3: Point[10] = (-0.693132, 2.91847, -0.0265488) 3: Point[11] = (2.2183, -1.80826, 0.50703) 3: Point[12] = (1.39353, -1.00232, -0.95899) 3: Point[13] = (1.25103, 0.670259, -0.814097) 3: Point[14] = (0.256075, 0.980761, -0.164604) 3: Point[15] = (-1.03049, -0.548251, -0.553664) 3: Point[16] = (-1.47707, 1.55245, -0.989743) 3: Point[17] = (2.81127, -0.97324, -0.222333) 3: Point[18] = (1.92081, 0.371631, 0.99905) 3: Point[19] = (0.940122, 0.7816, 0.628995) 3: Point[20] = (0.306997, -2.63033, 0.761482) 3: Point[21] = (0.612818, 2.28021, -0.932518) 3: Point[22] = (-0.7497, 1.24802, -0.839011) 3: Point[23] = (-0.154361, 1.04816, 0.339689) 3: Point[24] = (-0.26264, 1.12446, 0.534328) 3: Point[25] = (0.367177, -1.01677, 0.394335) 3: Point[26] = (0.424036, -0.917169, -0.144175) 3: Point[27] = (2.08261, -2.05786, -0.373061) 3: Point[28] = (0.65128, -0.912443, 0.476885) 3: Point[29] = (-2.93865, 0.176739, 0.330046) 3: Point[30] = (0.0752593, -2.86104, 0.506853) 3: Point[31] = (2.42109, -1.57246, -0.461926) 3: Point[32] = (-1.61943, -1.10542, 0.999229) 3: Point[33] = (0.692389, 0.770549, 0.265646) 3: Point[34] = (1.51841, -1.00022, -0.983344) 3: Point[35] = (2.85075, 0.814389, -0.262996) 3: Point[36] = (-0.784393, -0.623935, -0.067503) 3: Point[37] = (2.95477, -0.0154537, 0.297209) 3: Point[38] = (-2.01179, 0.81925, 0.985061) 3: Point[39] = (-1.06049, -0.640703, 0.648762) 3: Point[40] = (0.424778, -0.912213, 0.111761) 3: Point[41] = (1.62718, -2.51706, 0.0745558) 3: Point[42] = (0.991179, -0.137273, 0.0357742) 3: Point[43] = (0.586677, -0.981515, 0.516124) 3: Point[44] = (0.996297, 0.163993, -0.138971) 3: Point[45] = (0.999735, 2.81022, -0.184922) 3: Point[46] = (1.80657, -0.264164, 0.984706) 3: Point[47] = (-1.41495, 2.29442, -0.718394) 3: Point[48] = (-0.608066, -1.94542, -0.999269) 3: Point[49] = (2.15894, 1.69762, -0.665452) 3: Point[50] = (-0.0920339, -1.14741, -0.528542) 3: Point[51] = (-0.0803525, -2.82987, 0.556256) 3: Point[52] = (1.73755, -1.38298, -0.97533) 3: Point[53] = (1.33958, -1.69568, 0.986959) 3: Point[54] = (0.941158, 1.33454, -0.93023) 3: Point[55] = (-1.64739, 2.118, -0.730187) 3: Point[56] = (-2.09522, 2.14264, -0.0797809) 3: Point[57] = (-2.70164, -0.512752, -0.661593) 3: Point[58] = (0.00124064, -2.43306, -0.901366) 3: Point[59] = (1.26857, -0.754388, 0.851677) 3: Point[60] = (0.555985, -0.85319, -0.190731) 3: Point[61] = (-0.376652, 0.953098, -0.221429) 3: Point[62] = (0.575824, -1.52859, 0.930398) 3: Point[63] = (-0.917666, 0.426001, -0.152684) 3: Point[64] = (-2.26127, 1.45632, 0.724147) 3: Point[65] = (-2.49756, 0.33602, -0.854129) 3: Point[66] = (-1.21733, -0.63566, -0.779263) 3: Point[67] = (-0.869857, 2.58076, -0.690416) 3: Point[68] = (-1.405, -0.601792, -0.881844) 3: Point[69] = (2.31905, -1.05819, -0.835776) 3: Point[70] = (1.1973, -1.57894, -0.99983) 3: Point[71] = (1.49129, -0.646133, 0.927125) 3: Point[72] = (-0.64664, 1.6469, 0.973025) 3: Point[73] = (-1.07934, 0.185619, -0.425803) 3: Point[74] = (-2.2589, 0.840567, -0.911984) 3: Point[75] = (1.02056, -0.444786, -0.4623) 3: Point[76] = (-2.01362, 1.7785, 0.727048) 3: Point[77] = (-1.71524, -1.9513, 0.801496) 3: Point[78] = (0.249048, -1.73684, 0.969424) 3: Point[79] = (-0.971929, 0.340275, -0.242198) 3: Point[80] = (0.335253, 1.05331, 0.446812) 3: Point[81] = (0.0757352, -1.00345, 0.112152) 3: Point[82] = (-2.12621, -1.59312, 0.754033) 3: Point[83] = (-0.325965, -0.967661, -0.204281) 3: Point[84] = (0.847444, -2.75134, 0.47701) 3: Point[85] = (-2.5294, 1.59076, 0.154221) 3: Point[86] = (-1.51911, 2.47537, -0.42683) 3: Point[87] = (-1.23951, -2.45647, -0.659762) 3: Point[88] = (0.00537063, -2.98896, -0.148175) 3: Point[89] = (0.578604, -1.40605, -0.877514) 3: Point[90] = (1.32815, 0.993212, 0.939862) 3: Point[91] = (2.21921, 1.69625, 0.608911) 3: Point[92] = (2.11087, -1.62984, 0.745183) 3: Point[93] = (1.20745, 0.759486, -0.819168) 3: Point[94] = (-1.85454, 0.272276, -0.992084) 3: Point[95] = (1.12411, -0.192246, 0.511018) 3: Point[96] = (0.508635, -0.874107, -0.150054) 3: Point[97] = (1.8703, 0.692656, 0.999985) 3: Point[98] = (1.64362, -1.21013, 0.999157) 3: Point[99] = (0.840118, -2.50036, 0.770266) 3: Point[100] = (2.3287, -1.17792, 0.792659) 3: Point[101] = (-2.5428, 0.88818, -0.720498) 3: Point[102] = (-2.06784, -1.09828, -0.939917) 3: Point[103] = (0.200761, 0.999051, 0.194125) 3: Point[104] = (1.57705, -1.36916, 0.996079) 3: Point[105] = (1.27101, -0.84496, -0.880657) 3: Point[106] = (2.26878, -1.93253, 0.197654) 3: Point[107] = (1.00297, 2.79196, -0.256098) 3: Point[108] = (-1.40381, 2.64726, 0.0843284) 3: Point[109] = (-0.0517393, 1.58464, 0.910043) 3: Point[110] = (-0.301341, 1.33507, -0.775501) 3: Point[111] = (-0.916802, 2.82058, -0.25915) 3: Point[112] = (-2.39567, 1.05176, -0.78745) 3: Point[113] = (0.260687, -0.989292, 0.213524) 3: Point[114] = (1.12793, 2.77427, 0.101946) 3: Point[115] = (-0.0684132, -2.16283, 0.986474) 3: Point[116] = (2.93447, 0.299133, 0.313236) 3: Point[117] = (0.0327552, 1.65789, 0.939777) 3: Point[118] = (-0.909983, 2.25856, -0.900436) 3: Point[119] = (-0.654786, -2.77631, -0.522755) 3: Point[120] = (-0.637731, 0.816846, -0.267023) 3: Point[121] = (-2.09201, -0.485356, -0.989052) 3: Point[122] = (2.47346, 0.00404347, -0.880813) 3: Point[123] = (-1.07226, -1.22257, 0.927498) 3: Point[124] = (1.39068, -0.687531, -0.89371) 3: Point[125] = (2.49123, -0.780793, 0.791842) 3: Point[126] = (1.52017, -0.606522, 0.931673) 3: Point[127] = (-1.41023, 0.805159, -0.926575) 3: Point[128] = (-2.43387, -0.471599, -0.877741) 3: Point[129] = (-0.480206, 1.36832, -0.835253) 3: Point[130] = (0.879126, 0.619157, 0.380637) 3: Point[131] = (0.253086, 1.43446, -0.839482) 3: Point[132] = (0.517703, 2.78342, 0.556043) 3: Point[133] = (-1.00656, -2.07659, 0.95149) 3: Point[134] = (-1.40078, 0.925515, 0.94705) 3: Point[135] = (2.07634, -1.10323, 0.936286) 3: Point[136] = (-1.57233, -0.286151, 0.915709) 3: Point[137] = (-1.15179, -0.454341, 0.647765) 3: Point[138] = (0.760884, 2.73972, -0.537259) 3: Point[139] = (2.40479, 0.399947, 0.899063) 3: Point[140] = (-1.37636, 2.12399, 0.847406) 3: Point[141] = (0.62006, -0.788865, -0.0822217) 3: Point[142] = (-1.31255, 0.709433, -0.861362) 3: Point[143] = (2.87811, 0.586137, -0.34882) 3: Point[144] = (1.46216, -2.61813, 0.0500239) 3: Point[145] = (1.59775, 2.14439, 0.738569) 3: Point[146] = (2.16167, 0.2345, -0.984683) 3: Point[147] = (-2.62735, -1.44784, 0.0162527) 3: Point[148] = (1.55466, -2.06081, -0.813581) 3: Point[149] = (1.47686, 0.29164, -0.869111) 3: Point[150] = (0.360204, -0.932878, -0.00278948) 3: Point[151] = (1.02112, -0.84623, 0.738908) 3: Point[152] = (0.0753375, -2.00344, 0.999988) 3: Point[153] = (-0.13731, 0.991363, -0.0406637) 3: Point[154] = (-2.36319, -1.83848, -0.1084) 3: Point[155] = (-0.804614, -1.64747, -0.986035) 3: Point[156] = (1.77566, -2.38361, -0.233741) 3: Point[157] = (1.69896, -0.343352, 0.963782) 3: Point[158] = (0.0494913, -2.46795, -0.88349) 3: Point[159] = (1.35773, 0.589658, -0.854315) 3: Point[160] = (-1.96436, -2.22155, -0.260516) 3: Point[161] = (1.35473, 0.346732, 0.798798) 3: Point[162] = (0.400967, 2.47568, 0.861392) 3: Point[163] = (-1.62105, -0.57244, 0.959751) 3: Point[164] = (-0.867237, 0.754407, 0.525891) 3: Point[165] = (1.08774, 0.582665, -0.642803) 3: Point[166] = (-1.62211, -2.48905, 0.239222) 3: Point[167] = (1.2918, 0.216733, -0.723674) 3: Point[168] = (-2.23977, 1.04129, 0.882672) 3: Point[169] = (-2.15042, -1.07256, -0.915174) 3: Point[170] = (1.20646, 2.20671, -0.857204) 3: Point[171] = (-1.59666, 2.12975, -0.749687) 3: Point[172] = (-0.00507897, 1.00005, 0.0111568) 3: Point[173] = (1.08897, -0.548934, -0.625155) 3: Point[174] = (-2.08839, 1.31789, 0.882959) 3: Point[175] = (-2.67026, 0.777219, 0.624441) 3: Point[176] = (0.13441, 1.03453, -0.290844) 3: Point[177] = (-1.15658, 0.213361, 0.566723) 3: Point[178] = (-1.12091, -0.197702, -0.507272) 3: Point[179] = (2.20361, 2.03438, -0.0424845) 3: Point[180] = (-0.19056, -1.95805, 0.999465) 3: Point[181] = (-1.69647, -0.625828, 0.981438) 3: Point[182] = (-0.304353, -2.83101, -0.531083) 3: Point[183] = (0.145634, -2.16916, 0.984738) 3: Point[184] = (-2.34366, -0.143838, 0.93747) 3: Point[185] = (1.02711, -0.411657, 0.449125) 3: Point[186] = (-1.61566, -1.08739, -0.998621) 3: Point[187] = (-0.717365, 1.50453, 0.942856) 3: Point[188] = (-0.578568, 0.853096, 0.246208) 3: Point[189] = (1.11794, 0.455946, 0.609663) 3: Point[190] = (2.39251, 0.176334, 0.916949) 3: Point[191] = (2.91556, -0.62746, 0.187219) 3: Point[192] = (-1.14807, 2.59996, 0.539229) 3: Point[193] = (-0.177857, 1.90119, 0.995896) 3: Point[194] = (0.359148, 2.3192, -0.937923) 3: Point[195] = (1.27437, -0.690076, 0.834645) 3: Point[196] = (2.93028, -0.642987, 0.000995094) 3: Point[197] = (-1.26975, 1.91229, -0.955354) 3: Point[198] = (0.0738367, 1.2695, -0.685198) 3: Point[199] = (-1.69716, 1.2285, 0.995465) 3: Point[200] = (0.84571, 2.13804, -0.954183) 3: Point[201] = (0.352469, -2.93445, -0.294839) 3: Point[202] = (1.6039, 1.74999, 0.927508) 3: Point[203] = (-2.11217, 0.760269, 0.969565) 3: Point[204] = (1.74218, 2.29099, 0.478357) 3: Point[205] = (2.92347, 0.330805, -0.33526) 3: Point[206] = (-2.35952, 0.25088, -0.927902) 3: Point[207] = (-1.41032, -0.170789, 0.815062) 3: Point[208] = (-1.01612, -2.68327, -0.494424) 3: Point[209] = (-1.59345, 2.26723, -0.636622) 3: Point[210] = (-0.395803, -2.90869, 0.353327) 3: Point[211] = (-1.26195, -1.96838, -0.941085) 3: Point[212] = (-1.30549, 1.57898, 0.99881) 3: Point[213] = (-1.35585, -0.2371, 0.781762) 3: Point[214] = (2.52116, 1.05897, 0.678574) 3: Point[215] = (-1.95615, 1.845, 0.724791) 3: Point[216] = (1.49796, 1.58854, 0.983033) 3: Point[217] = (-0.981147, -0.312003, 0.241344) 3: Point[218] = (1.89599, 0.736815, -0.999417) 3: Point[219] = (-0.757097, -0.653318, 0.00461774) 3: Point[220] = (1.10316, -2.54112, -0.637745) 3: Point[221] = (-1.72022, 2.2319, 0.575364) 3: Point[222] = (2.94799, 0.358548, -0.244228) 3: Point[223] = (-1.00994, -0.0359409, 0.145075) 3: Point[224] = (1.00132, 0.624999, 0.572892) 3: Point[225] = (2.30856, 1.91312, 0.0591476) 3: Point[226] = (-1.66596, -1.84466, 0.874183) 3: Point[227] = (1.04218, -0.068874, 0.294844) 3: Point[228] = (-0.601697, -2.17864, 0.965553) 3: Point[229] = (1.08052, 2.34546, 0.812916) 3: Point[230] = (-1.79474, -0.705336, -0.997431) 3: Point[231] = (1.12311, 0.346525, 0.565644) 3: Point[232] = (0.69675, -1.32919, -0.866447) 3: Point[233] = (2.13603, -0.513083, -0.980447) 3: Point[234] = (-1.93197, 1.69158, -0.82312) 3: Point[235] = (-2.01941, 0.0465497, 0.999801) 3: Point[236] = (-2.59424, 1.10328, -0.57366) 3: Point[237] = (-0.585219, 1.25802, -0.790451) 3: Point[238] = (-0.0576402, 1.41565, 0.812348) 3: Point[239] = (2.38913, 1.26301, 0.711751) 3: Point[240] = (2.30157, 0.40591, 0.941473) 3: Point[241] = (0.275589, -1.00169, -0.276233) 3: Point[242] = (-1.29248, -0.876529, 0.898813) 3: Point[243] = (2.35322, 1.36303, -0.694525) 3: Point[244] = (1.54876, -1.90131, -0.89188) 3: Point[245] = (0.165932, 1.69908, 0.956162) 3: Point[246] = (-1.52945, 1.36995, 0.998579) 3: Point[247] = (0.947256, 0.321394, -0.0242348) 3: Point[248] = (-0.849267, -1.69619, -0.994674) 3: Point[249] = (1.17007, -1.45748, 0.991388) 3: Point[250] = (-1.02066, -0.234069, -0.303449) 3: Point[251] = (-1.7903, -0.338548, 0.984036) 3: Point[252] = (-0.202581, -2.9098, -0.39924) 3: Point[253] = (0.556542, 0.83595, 0.092279) 3: Point[254] = (-0.192049, 2.82751, 0.551733) 3: Point[255] = (-2.43832, 1.32433, -0.632263) 3: Point[256] = (1.00458, 2.2018, 0.907457) 3: Point[257] = (0.258231, 1.01719, 0.3106) 3: Point[258] = (-0.667636, -0.747459, -0.066506) 3: Point[259] = (-0.925217, -0.458919, -0.25394) 3: Point[260] = (0.593032, 0.895691, -0.378063) 3: Point[261] = (2.41891, 1.2927, -0.669667) 3: Point[262] = (2.86199, 0.898402, 0.0252391) 3: Point[263] = (0.577555, 2.93814, -0.105947) 3: Point[264] = (-1.08511, -1.17368, -0.91583) 3: Point[265] = (-0.00823512, -2.34072, 0.940161) 3: Point[266] = (0.723356, 0.693576, -0.0654384) 3: Point[267] = (-2.45564, -0.108134, 0.888942) 3: Point[268] = (1.05549, 2.48106, 0.71781) 3: Point[269] = (0.0900115, -1.35462, 0.766376) 3: Point[270] = (1.07216, 0.711685, -0.701026) 3: Point[271] = (1.76426, -1.10328, -0.996728) 3: Point[272] = (-2.42237, -1.22877, 0.697892) 3: Point[273] = (-2.29574, 1.39432, -0.727611) 3: Point[274] = (-0.806085, -0.591802, -0.00185677) 3: Point[275] = (0.584374, -1.2456, -0.781316) 3: Point[276] = (-0.11713, 1.30319, -0.722322) 3: Point[277] = (-0.427013, -2.23637, 0.960934) 3: Point[278] = (1.8423, -1.55652, -0.911271) 3: Point[279] = (0.203998, 1.2192, -0.645392) 3: Point[280] = (0.446216, -1.7406, -0.979155) 3: Point[281] = (-2.2603, -1.9494, -0.173628) 3: Point[282] = (-1.25891, 2.70615, 0.174572) 3: Point[283] = (1.56639, 0.363208, -0.919944) 3: Point[284] = (-1.34865, 0.197324, -0.770874) 3: Point[285] = (2.34234, -1.53508, 0.599274) 3: Point[286] = (-0.128003, 2.84278, 0.533725) 3: Point[287] = (2.6796, 0.576255, -0.671661) 3: Point[288] = (-1.22134, 1.75573, -0.990327) 3: Point[289] = (-2.6508, 0.801279, -0.63894) 3: Point[290] = (1.77059, -1.05701, -0.99807) 3: Point[291] = (-0.0617877, 2.73595, -0.676273) 3: Point[292] = (-1.02613, -0.329485, 0.386554) 3: Point[293] = (0.289216, 2.86988, 0.4667) 3: Point[294] = (0.0221377, -1.63671, 0.931734) 3: Point[295] = (0.988029, 1.37027, -0.950519) 3: Point[296] = (-2.3515, -1.28586, -0.733114) 3: Point[297] = (-0.98495, -2.153, -0.929984) 3: Point[298] = (0.815197, 0.609995, -0.189686) 3: Point[299] = (-1.36318, 0.682495, -0.879709) 3: Point[300] = (-0.56244, 2.6018, -0.749591) 3/140 Test #3: Common_example_vector_cgal_3D_off_reader .................................................... Passed 0.07 sec test 4 Start 4: Common_example_vector_cgal_off_reader 4: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common/cgal_off_reader "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" 4: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/common 4: Test timeout computed to be: 10000000 4: Point[0] = 1 1 0 4: Point[1] = 7 0 0 4: Point[2] = 4 6 0 4: Point[3] = 9 6 0 4: Point[4] = 0 14 0 4: Point[5] = 2 19 0 4: Point[6] = 9 17 0 4/140 Test #4: Common_example_vector_cgal_off_reader ....................................................... Passed 0.09 sec test 5 Start 5: off_file_from_shape_generator_on_sphere_1000_3_15.2 5: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common/off_file_from_shape_generator "on" "sphere" "onSphere.off" "1000" "3" "15.2" 5: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common 5: Test timeout computed to be: 10000000 5/140 Test #5: off_file_from_shape_generator_on_sphere_1000_3_15.2 ......................................... Passed 0.09 sec test 6 Start 6: off_file_from_shape_generator_in_sphere_100_2 6: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common/off_file_from_shape_generator "in" "sphere" "inSphere.off" "100" "2" 6: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common 6: Test timeout computed to be: 10000000 6/140 Test #6: off_file_from_shape_generator_in_sphere_100_2 ............................................... Passed 0.02 sec test 7 Start 7: off_file_from_shape_generator_in_cube_10000_3_5.8 7: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common/off_file_from_shape_generator "in" "cube" "inCube.off" "10000" "3" "5.8" 7: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/common 7: Test timeout computed to be: 10000000 7/140 Test #7: off_file_from_shape_generator_in_cube_10000_3_5.8 ........................................... Passed 0.07 sec test 8 Start 8: Alpha_complex_example_from_points 8: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_from_points 8: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 8: Test timeout computed to be: 10000000 8: Alpha complex is of dimension 2 - 25 simplices - 7 vertices. 8: Iterator on alpha complex simplices in the filtration order, with [filtration value]: 8: ( 0 ) -> [0] 8: ( 1 ) -> [0] 8: ( 2 ) -> [0] 8: ( 3 ) -> [0] 8: ( 4 ) -> [0] 8: ( 5 ) -> [0] 8: ( 6 ) -> [0] 8: ( 3 2 ) -> [6.25] 8: ( 5 4 ) -> [7.25] 8: ( 2 0 ) -> [8.5] 8: ( 1 0 ) -> [9.25] 8: ( 3 1 ) -> [10] 8: ( 2 1 ) -> [11.25] 8: ( 3 2 1 ) -> [12.5] 8: ( 2 1 0 ) -> [12.9959] 8: ( 6 5 ) -> [13.25] 8: ( 4 2 ) -> [20] 8: ( 6 4 ) -> [22.7367] 8: ( 6 5 4 ) -> [22.7367] 8: ( 6 3 ) -> [30.25] 8: ( 6 2 ) -> [36.5] 8: ( 6 3 2 ) -> [36.5] 8: ( 6 4 2 ) -> [37.2449] 8: ( 4 0 ) -> [59.7107] 8: ( 4 2 0 ) -> [59.7107] 8/140 Test #8: Alpha_complex_example_from_points ........................................................... Passed 0.30 sec test 9 Start 9: Alpha_complex_example_from_off_60 9: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" "60.0" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_result_60.txt" 9: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 9: Test timeout computed to be: 10000000 9/140 Test #9: Alpha_complex_example_from_off_60 ........................................................... Passed 0.36 sec test 10 Start 10: Alpha_complex_example_from_off_32 10: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" "32.0" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_result_32.txt" 10: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 10: Test timeout computed to be: 10000000 10/140 Test #10: Alpha_complex_example_from_off_32 ........................................................... Passed 0.02 sec test 11 Start 11: Alpha_complex_example_fast_from_off_60 11: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_fast_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" "60.0" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/fastalphaoffreader_result_60.txt" 11: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 11: Test timeout computed to be: 10000000 11/140 Test #11: Alpha_complex_example_fast_from_off_60 ...................................................... Passed 0.29 sec test 12 Start 12: Alpha_complex_example_fast_from_off_32 12: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_fast_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" "32.0" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/fastalphaoffreader_result_32.txt" 12: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 12: Test timeout computed to be: 10000000 12/140 Test #12: Alpha_complex_example_fast_from_off_32 ...................................................... Passed 0.02 sec test 13 Start 13: Alpha_complex_example_from_off_60_diff_files 13: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_result_60.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_for_doc_60.txt" 13: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 13: Test timeout computed to be: 10000000 13/140 Test #13: Alpha_complex_example_from_off_60_diff_files ................................................ Passed 0.08 sec test 14 Start 14: Alpha_complex_example_from_off_32_diff_files 14: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_result_32.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_for_doc_32.txt" 14: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 14: Test timeout computed to be: 10000000 14/140 Test #14: Alpha_complex_example_from_off_32_diff_files ................................................ Passed 0.02 sec test 15 Start 15: Alpha_complex_example_fast_from_off_60_diff_files 15: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/fastalphaoffreader_result_60.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_for_doc_60.txt" 15: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 15: Test timeout computed to be: 10000000 15/140 Test #15: Alpha_complex_example_fast_from_off_60_diff_files ........................................... Passed 0.01 sec test 16 Start 16: Alpha_complex_example_fast_from_off_32_diff_files 16: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/fastalphaoffreader_result_32.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/alphaoffreader_for_doc_32.txt" 16: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 16: Test timeout computed to be: 10000000 16/140 Test #16: Alpha_complex_example_fast_from_off_32_diff_files ........................................... Passed 0.01 sec test 17 Start 17: Alpha_complex_example_weighted_3d_from_points 17: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_weighted_3d_from_points 17: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 17: Test timeout computed to be: 10000000 17: Weighted alpha complex is of dimension 3 - 29 simplices - 5 vertices. 17: Iterator on weighted alpha complex simplices in the filtration order, with [filtration value]: 17: ( 0 ) -> [-4] 17: ( 1 ) -> [-4] 17: ( 2 ) -> [-4] 17: ( 3 ) -> [-4] 17: ( 1 0 ) -> [-2] 17: ( 2 0 ) -> [-2] 17: ( 2 1 ) -> [-2] 17: ( 3 0 ) -> [-2] 17: ( 3 1 ) -> [-2] 17: ( 3 2 ) -> [-2] 17: ( 2 1 0 ) -> [-1.33333] 17: ( 3 1 0 ) -> [-1.33333] 17: ( 3 2 0 ) -> [-1.33333] 17: ( 3 2 1 ) -> [-1.33333] 17: ( 3 2 1 0 ) -> [-1] 17: ( 4 ) -> [-1] 17: ( 4 2 ) -> [-1] 17: ( 4 0 ) -> [23] 17: ( 4 1 ) -> [23] 17: ( 4 2 0 ) -> [23] 17: ( 4 2 1 ) -> [23] 17: ( 4 3 ) -> [23] 17: ( 4 3 2 ) -> [23] 17: ( 4 1 0 ) -> [95] 17: ( 4 2 1 0 ) -> [95] 17: ( 4 3 0 ) -> [95] 17: ( 4 3 1 ) -> [95] 17: ( 4 3 2 0 ) -> [95] 17: ( 4 3 2 1 ) -> [95] 17/140 Test #17: Alpha_complex_example_weighted_3d_from_points ............................................... Passed 0.26 sec test 18 Start 18: Alpha_complex_example_3d_from_points 18: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Alpha_complex_example_3d_from_points 18: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 18: Test timeout computed to be: 10000000 18: Alpha complex is of dimension 3 - 29 simplices - 5 vertices. 18: Iterator on alpha complex simplices in the filtration order, with [filtration value]: 18: ( 0 ) -> [0] 18: ( 1 ) -> [0] 18: ( 2 ) -> [0] 18: ( 3 ) -> [0] 18: ( 4 ) -> [0] 18: ( 3 1 ) -> [0.75] 18: ( 2 0 ) -> [2] 18: ( 3 0 ) -> [2] 18: ( 3 2 ) -> [2] 18: ( 4 0 ) -> [2] 18: ( 4 2 ) -> [2] 18: ( 4 3 ) -> [2] 18: ( 3 2 0 ) -> [2.66667] 18: ( 4 2 0 ) -> [2.66667] 18: ( 4 3 0 ) -> [2.66667] 18: ( 4 3 2 ) -> [2.66667] 18: ( 4 3 2 0 ) -> [3] 18: ( 1 0 ) -> [14.25] 18: ( 2 1 ) -> [14.25] 18: ( 3 1 0 ) -> [14.25] 18: ( 3 2 1 ) -> [14.25] 18: ( 4 1 ) -> [14.25] 18: ( 4 3 1 ) -> [14.25] 18: ( 2 1 0 ) -> [54.75] 18: ( 3 2 1 0 ) -> [54.75] 18: ( 4 1 0 ) -> [54.75] 18: ( 4 2 1 ) -> [54.75] 18: ( 4 3 1 0 ) -> [54.75] 18: ( 4 3 2 1 ) -> [54.75] 18/140 Test #18: Alpha_complex_example_3d_from_points ........................................................ Passed 0.22 sec test 19 Start 19: Weighted_alpha_complex_example_from_points 19: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex/Weighted_alpha_complex_example_from_points 19: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Alpha_complex 19: Test timeout computed to be: 10000000 19: Weighted alpha complex is of dimension 3 - 29 simplices - 5 vertices. 19: Iterator on weighted alpha complex simplices in the filtration order, with [filtration value]: 19: ( 0 ) -> [-4] 19: ( 1 ) -> [-4] 19: ( 2 ) -> [-4] 19: ( 3 ) -> [-4] 19: ( 1 0 ) -> [-2] 19: ( 2 0 ) -> [-2] 19: ( 2 1 ) -> [-2] 19: ( 3 0 ) -> [-2] 19: ( 3 1 ) -> [-2] 19: ( 3 2 ) -> [-2] 19: ( 3 2 0 ) -> [-1.33333] 19: ( 3 2 1 ) -> [-1.33333] 19: ( 2 1 0 ) -> [-1.33333] 19: ( 3 1 0 ) -> [-1.33333] 19: ( 3 2 1 0 ) -> [-1] 19: ( 4 ) -> [-1] 19: ( 4 3 ) -> [-1] 19: ( 4 2 ) -> [23] 19: ( 4 3 2 ) -> [23] 19: ( 4 0 ) -> [23] 19: ( 4 1 ) -> [23] 19: ( 4 3 0 ) -> [23] 19: ( 4 3 1 ) -> [23] 19: ( 4 1 0 ) -> [95] 19: ( 4 2 0 ) -> [95] 19: ( 4 2 1 ) -> [95] 19: ( 4 3 1 0 ) -> [95] 19: ( 4 3 2 0 ) -> [95] 19: ( 4 3 2 1 ) -> [95] 19/140 Test #19: Weighted_alpha_complex_example_from_points .................................................. Passed 0.21 sec test 20 Start 20: Alpha_complex_utilities_safe_alpha_complex_persistence 20: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-p" "2" "-m" "0.45" "-o" "safe.pers" 20: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 20: Test timeout computed to be: 10000000 20: Simplicial complex is of dimension 3 - 9809 simplices - 300 vertices. 20: Simplex_tree dim: 3 20: Result in file: safe.pers 20/140 Test #20: Alpha_complex_utilities_safe_alpha_complex_persistence ...................................... Passed 0.50 sec test 21 Start 21: Alpha_complex_utilities_fast_alpha_complex_persistence 21: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-p" "2" "-m" "0.45" "-o" "fast.pers" "-f" 21: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 21: Test timeout computed to be: 10000000 21: Simplicial complex is of dimension 3 - 9809 simplices - 300 vertices. 21: Simplex_tree dim: 3 21: Result in file: fast.pers 21/140 Test #21: Alpha_complex_utilities_fast_alpha_complex_persistence ...................................... Passed 0.20 sec test 22 Start 22: Alpha_complex_utilities_exact_alpha_complex_persistence 22: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-p" "2" "-m" "0.45" "-o" "exact.pers" "-e" 22: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 22: Test timeout computed to be: 10000000 22: Simplicial complex is of dimension 3 - 9809 simplices - 300 vertices. 22: Simplex_tree dim: 3 22: Result in file: exact.pers 22/140 Test #22: Alpha_complex_utilities_exact_alpha_complex_persistence ..................................... Passed 0.37 sec test 23 Start 23: Alpha_complex_utilities_diff_exact_alpha_complex 23: Test command: /usr/bin/diff "exact.pers" "safe.pers" 23: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 23: Test timeout computed to be: 10000000 23/140 Test #23: Alpha_complex_utilities_diff_exact_alpha_complex ............................................ Passed 0.00 sec test 24 Start 24: Alpha_complex_utilities_diff_fast_alpha_complex 24: Test command: /usr/bin/diff "fast.pers" "safe.pers" 24: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 24: Test timeout computed to be: 10000000 24/140 Test #24: Alpha_complex_utilities_diff_fast_alpha_complex ............................................. Passed 0.00 sec test 25 Start 25: Alpha_complex_utilities_alpha_complex_3d 25: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_3d_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-p" "2" "-m" "0.45" "-o" "safe_3d.pers" 25: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 25: Test timeout computed to be: 10000000 25: Simplex_tree dim: 3 25: Result in file: safe_3d.pers 25/140 Test #25: Alpha_complex_utilities_alpha_complex_3d .................................................... Passed 0.11 sec test 26 Start 26: Alpha_complex_utilities_exact_alpha_complex_3d 26: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_3d_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-p" "2" "-m" "0.45" "-o" "exact_3d.pers" "-e" 26: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 26: Test timeout computed to be: 10000000 26: Simplex_tree dim: 3 26: Result in file: exact_3d.pers 26/140 Test #26: Alpha_complex_utilities_exact_alpha_complex_3d .............................................. Passed 0.30 sec test 27 Start 27: Alpha_complex_utilities_fast_alpha_complex_3d 27: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_3d_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-p" "2" "-m" "0.45" "-o" "fast_3d.pers" "-f" 27: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 27: Test timeout computed to be: 10000000 27: Simplex_tree dim: 3 27: Result in file: fast_3d.pers 27/140 Test #27: Alpha_complex_utilities_fast_alpha_complex_3d ............................................... Passed 0.05 sec test 28 Start 28: Alpha_complex_utilities_diff_exact_alpha_complex_3d 28: Test command: /usr/bin/diff "exact_3d.pers" "safe_3d.pers" 28: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 28: Test timeout computed to be: 10000000 28/140 Test #28: Alpha_complex_utilities_diff_exact_alpha_complex_3d ......................................... Passed 0.00 sec test 29 Start 29: Alpha_complex_utilities_diff_fast_alpha_complex_3d 29: Test command: /usr/bin/diff "fast_3d.pers" "safe_3d.pers" 29: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 29: Test timeout computed to be: 10000000 29/140 Test #29: Alpha_complex_utilities_diff_fast_alpha_complex_3d .......................................... Passed 0.00 sec test 30 Start 30: Alpha_complex_utilities_periodic_alpha_complex_3d_persistence 30: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_3d_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/grid_10_10_10_in_0_1.off" "-c" "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/iso_cuboid_3_in_0_1.txt" "-p" "2" "-m" "0" 30: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 30: Test timeout computed to be: 10000000 30: Simplex_tree dim: 3 30: 2 3 0.0075 inf 30: 2 2 0.005 inf 30: 2 2 0.005 inf 30: 2 2 0.005 inf 30: 2 1 0.0025 inf 30: 2 1 0.0025 inf 30: 2 1 0.0025 inf 30: 2 0 0 inf 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 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0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 2 0.005 0.0075 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 30: 2 1 0.0025 0.005 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Passed 4.09 sec test 31 Start 31: Alpha_complex_utilities_weighted_alpha_complex_3d 31: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_3d_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/grid_10_10_10_in_0_1.off" "-w" "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/grid_10_10_10_in_0_1.weights" "-p" "2" "-m" "0" 31: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 31: Test timeout computed to be: 10000000 31: Simplex_tree dim: 3 31: 2 0 -1e-06 inf 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 0.002499 0.004999 31: 2 1 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31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31: 2 0 -1e-06 0.002499 31/140 Test #31: Alpha_complex_utilities_weighted_alpha_complex_3d ........................................... Passed 1.25 sec test 32 Start 32: Alpha_complex_utilities_weighted_periodic_alpha_complex_3d 32: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex/alpha_complex_3d_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/grid_10_10_10_in_0_1.off" "-w" "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/grid_10_10_10_in_0_1.weights" "-c" "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/iso_cuboid_3_in_0_1.txt" "-p" "2" "-m" "0" "-e" 32: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Alpha_complex 32: Test timeout computed to be: 10000000 32: Simplex_tree dim: 3 32: 2 3 0.007499 inf 32: 2 2 0.004999 inf 32: 2 2 0.004999 inf 32: 2 2 0.004999 inf 32: 2 1 0.002499 inf 32: 2 1 0.002499 inf 32: 2 1 0.002499 inf 32: 2 0 -1e-06 inf 32: 2 1 0.002499 0.004999 32: 2 1 0.002499 0.004999 32: 2 1 0.002499 0.004999 32: 2 1 0.002499 0.004999 32: 2 1 0.002499 0.004999 32: 2 1 0.002499 0.004999 32: 2 1 0.002499 0.004999 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32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 2 0.004999 0.007499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32: 2 0 -1e-06 0.002499 32/140 Test #32: Alpha_complex_utilities_weighted_periodic_alpha_complex_3d .................................. Passed 5.68 sec test 33 Start 33: Bitmap_cubical_complex_example_random 33: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bitmap_cubical_complex/Random_bitmap_cubical_complex "2" "100" "100" 33: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bitmap_cubical_complex 33: Test timeout computed to be: 10000000 33: This program computes persistent homology, by using bitmap_cubical_complex class, of cubical complexes. The first parameter of the program is the dimension D of the bitmap. The next D parameters are number of top dimensional cubes in each dimension of the bitmap. The program will create random cubical complex of that sizes and compute persistent homology of it. 33/140 Test #33: Bitmap_cubical_complex_example_random ....................................................... Passed 0.05 sec test 34 Start 34: Bitmap_cubical_complex_utility_persistence_one_sphere 34: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex/cubical_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/bitmap/CubicalOneSphere.txt" 34: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex 34: Test timeout computed to be: 10000000 34: This program computes persistent homology, by using bitmap_cubical_complex class, of cubical complexes provided in text files in Perseus style (the only numbered in the first line is a dimension D of abitmap. In the lines I between 2 and D+1 there are numbers of top dimensional cells in the direction I. Let N denote product of the numbers in the lines between 2 and D. In the lines D+2 to D+2+N there are filtrations of top dimensional cells. We assume that the cells are in the lexicographical order. See CubicalOneSphere.txt or CubicalTwoSphere.txt for example. 34: 34: Result in file: CubicalOneSphere.txt_persistence 34/140 Test #34: Bitmap_cubical_complex_utility_persistence_one_sphere ....................................... Passed 0.02 sec test 35 Start 35: Bitmap_cubical_complex_utility_persistence_two_sphere 35: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex/cubical_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/bitmap/CubicalTwoSphere.txt" 35: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex 35: Test timeout computed to be: 10000000 35: This program computes persistent homology, by using bitmap_cubical_complex class, of cubical complexes provided in text files in Perseus style (the only numbered in the first line is a dimension D of abitmap. In the lines I between 2 and D+1 there are numbers of top dimensional cells in the direction I. Let N denote product of the numbers in the lines between 2 and D. In the lines D+2 to D+2+N there are filtrations of top dimensional cells. We assume that the cells are in the lexicographical order. See CubicalOneSphere.txt or CubicalTwoSphere.txt for example. 35: 35: Result in file: CubicalTwoSphere.txt_persistence 35/140 Test #35: Bitmap_cubical_complex_utility_persistence_two_sphere ....................................... Passed 0.01 sec test 36 Start 36: Bitmap_cubical_complex_utility_periodic_boundary_conditions_2d_torus 36: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/bitmap/2d_torus.txt" 36: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex 36: Test timeout computed to be: 10000000 36: This program computes persistent homology, by using Bitmap_cubical_complex_periodic_boundary_conditions class, of cubical complexes provided in text files in Perseus style (the only numbered in the first line is a dimension D of a bitmap. In the lines I between 2 and D+1 there are numbers of top dimensional cells in the direction I. Let N denote product of the numbers in the lines between 2 and D. In the lines D+2 to D+2+N there are filtrations of top dimensional cells. We assume that the cells are in the lexicographical order. See CubicalOneSphere.txt or CubicalTwoSphere.txt for example. 36: 36: Result in file: 2d_torus.txt_persistence 36/140 Test #36: Bitmap_cubical_complex_utility_periodic_boundary_conditions_2d_torus ........................ Passed 0.00 sec test 37 Start 37: Bitmap_cubical_complex_utility_periodic_boundary_conditions_3d_torus 37: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/bitmap/3d_torus.txt" 37: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bitmap_cubical_complex 37: Test timeout computed to be: 10000000 37: This program computes persistent homology, by using Bitmap_cubical_complex_periodic_boundary_conditions class, of cubical complexes provided in text files in Perseus style (the only numbered in the first line is a dimension D of a bitmap. In the lines I between 2 and D+1 there are numbers of top dimensional cells in the direction I. Let N denote product of the numbers in the lines between 2 and D. In the lines D+2 to D+2+N there are filtrations of top dimensional cells. We assume that the cells are in the lexicographical order. See CubicalOneSphere.txt or CubicalTwoSphere.txt for example. 37: 37: Result in file: 3d_torus.txt_persistence 37/140 Test #37: Bitmap_cubical_complex_utility_periodic_boundary_conditions_3d_torus ........................ Passed 0.00 sec test 38 Start 38: Bottleneck_distance_example_basic 38: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance/bottleneck_basic_example 38: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance 38: Test timeout computed to be: 10000000 38: Bottleneck distance = 0.75 38: Approx bottleneck distance = 0.722013 38/140 Test #38: Bottleneck_distance_example_basic ........................................................... Passed 0.00 sec test 39 Start 39: Bottleneck_distance_example_alpha_rips_persistence_bottleneck 39: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance/alpha_rips_persistence_bottleneck_distance "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-r" "0.15" "-m" "0.12" "-d" "3" "-p" "3" 39: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Bottleneck_distance 39: Test timeout computed to be: 10000000 39: The Rips complex contains 10943 simplices and has dimension 3 39: The Alpha complex contains 8090 simplices and has dimension 3 39: In dimension 0, bottleneck distance = 0.0612727 39: In dimension 1, bottleneck distance = 0.0521735 39: In dimension 2, bottleneck distance = 0.0635823 39: ================================================================================ 39: Bottleneck distance is 0.0635823 39/140 Test #39: Bottleneck_distance_example_alpha_rips_persistence_bottleneck ............................... Passed 0.20 sec test 40 Start 40: Bottleneck_distance_utilities_Bottleneck_read_file 40: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bottleneck_distance/bottleneck_distance "/build/gudhi-3.7.1+dfsg/build/userversion/data/persistence_diagram/first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/data/persistence_diagram/second.pers" 40: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Bottleneck_distance 40: Test timeout computed to be: 10000000 40: The distance between the diagrams is : 0.75. The tolerance is : 2.22507e-308 40/140 Test #40: Bottleneck_distance_utilities_Bottleneck_read_file .......................................... Passed 0.01 sec test 41 Start 41: Cech_complex_example_from_points 41: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Cech_complex/Cech_complex_example_from_points 41: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Cech_complex 41: Test timeout computed to be: 10000000 41: Cech complex is of dimension 2 - 30 simplices - 11 vertices. 41: Iterator on Cech complex simplices in the filtration order, with [filtration value]: 41: ( 0 ) -> [0] 41: ( 1 ) -> [0] 41: ( 2 ) -> [0] 41: ( 3 ) -> [0] 41: ( 4 ) -> [0] 41: ( 5 ) -> [0] 41: ( 6 ) -> [0] 41: ( 7 ) -> [0] 41: ( 8 ) -> [0] 41: ( 9 ) -> [0] 41: ( 10 ) -> [0] 41: ( 9 4 ) -> [0.5] 41: ( 9 6 ) -> [0.5] 41: ( 10 1 ) -> [0.559017] 41: ( 10 4 ) -> [0.559017] 41: ( 1 0 ) -> [0.707107] 41: ( 2 0 ) -> [0.707107] 41: ( 3 2 ) -> [0.707107] 41: ( 6 4 ) -> [0.707107] 41: ( 9 6 4 ) -> [0.707107] 41: ( 2 1 ) -> [1] 41: ( 2 1 0 ) -> [1] 41: ( 4 1 ) -> [1] 41: ( 5 3 ) -> [1] 41: ( 7 3 ) -> [1] 41: ( 7 5 ) -> [1] 41: ( 7 6 ) -> [1] 41: ( 8 6 ) -> [1] 41: ( 8 7 ) -> [1] 41: ( 10 4 1 ) -> [1] 41/140 Test #41: Cech_complex_example_from_points ............................................................ Passed 0.00 sec test 42 Start 42: Cech_complex_utility_from_rips_on_tore_3D_safe 42: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex/cech_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" "-o" "safe.pers" 42: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex 42: Test timeout computed to be: 10000000 42: The complex contains 1251 simplices 42: and has dimension 3 42/140 Test #42: Cech_complex_utility_from_rips_on_tore_3D_safe .............................................. Passed 0.01 sec test 43 Start 43: Cech_complex_utility_from_rips_on_tore_3D_fast 43: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex/cech_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" "-o" "fast.pers" "-f" 43: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex 43: Test timeout computed to be: 10000000 43: The complex contains 1251 simplices 43: and has dimension 3 43/140 Test #43: Cech_complex_utility_from_rips_on_tore_3D_fast .............................................. Passed 0.01 sec test 44 Start 44: Cech_complex_utility_from_rips_on_tore_3D_exact 44: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex/cech_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" "-o" "exact.pers" "-e" 44: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex 44: Test timeout computed to be: 10000000 44: The complex contains 1251 simplices 44: and has dimension 3 44/140 Test #44: Cech_complex_utility_from_rips_on_tore_3D_exact ............................................. Passed 0.17 sec test 45 Start 45: Cech_complex_utilities_diff_exact 45: Test command: /usr/bin/diff "exact.pers" "safe.pers" 45: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex 45: Test timeout computed to be: 10000000 45/140 Test #45: Cech_complex_utilities_diff_exact ........................................................... Passed 0.00 sec test 46 Start 46: Cech_complex_utilities_diff_fast 46: Test command: /usr/bin/diff "fast.pers" "safe.pers" 46: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Cech_complex 46: Test timeout computed to be: 10000000 46/140 Test #46: Cech_complex_utilities_diff_fast ............................................................ Passed 0.00 sec test 47 Start 47: Contraction_example_tore3D_0.2 47: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction/RipsContraction "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "0.2" 47: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Contraction 47: Test timeout computed to be: 10000000 47: Build the Rips complex with 1307 vertices 47: Initial complex has 1307 vertices and 38607 edges 47: Counting final number of simplices 47: Final complex has 14 vertices, 55 edges, 45 blockers and 132 simplices 47: Time to simplify and enumerate simplices: 1.1s 47/140 Test #47: Contraction_example_tore3D_0.2 .............................................................. Passed 1.14 sec test 48 Start 48: Edge_collapse_example_basic 48: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse/Edge_collapse_example_basic 48: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse 48: Test timeout computed to be: 10000000 48: fn[1, 3] = 2 48: fn[0, 1] = 1 48: fn[1, 2] = 1 48: fn[2, 3] = 1 48: fn[3, 0] = 1 48/140 Test #48: Edge_collapse_example_basic ................................................................. Passed 0.00 sec test 49 Start 49: Edge_collapse_conserve_persistence_1 49: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse/Edge_collapse_conserve_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "0.2" 49: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse 49: Test timeout computed to be: 10000000 49/140 Test #49: Edge_collapse_conserve_persistence_1 ........................................................ Passed 0.01 sec test 50 Start 50: Edge_collapse_conserve_persistence_2 50: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse/Edge_collapse_conserve_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "1.8" 50: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Collapse 50: Test timeout computed to be: 10000000 50/140 Test #50: Edge_collapse_conserve_persistence_2 ........................................................ Passed 0.80 sec test 51 Start 51: Edge_collapse_utilities_point_cloud_rips_persistence 51: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse/point_cloud_edge_collapse_rips_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" "-o" "off_results.pers" 51: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse 51: Test timeout computed to be: 10000000 51: The current input values to run the program is: 51: min_persistence, threshold, max_complex_dimension, off_file_points, filediag 51: 0.5, 0.25, 3, /build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off, off_results.pers 51: Successfully read 1307 point_vector. 51: Ambient dimension is 3. 51: The complex contains 9520 simplices after collapse. 51: and has dimension 3 51/140 Test #51: Edge_collapse_utilities_point_cloud_rips_persistence ........................................ Passed 0.04 sec test 52 Start 52: Edge_collapse_utilities_distance_matrix_rips_persistence 52: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse/distance_matrix_edge_collapse_rips_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/distance_matrix/tore3D_1307_distance_matrix.csv" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" "-o" "csv_results.pers" 52: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse 52: Test timeout computed to be: 10000000 52: Read the distance matrix successfully, of size: 1307 52: The complex contains 9520 simplices after collapse. 52: and has dimension 3 52/140 Test #52: Edge_collapse_utilities_distance_matrix_rips_persistence .................................... Passed 0.46 sec test 53 Start 53: Edge_collapse_utilities_diff_persistence 53: Test command: /usr/bin/diff "off_results.pers" "csv_results.pers" 53: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Collapse 53: Test timeout computed to be: 10000000 53/140 Test #53: Edge_collapse_utilities_diff_persistence .................................................... Passed 0.00 sec test 54 Start 54: Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example 54: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation/Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example 54: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation 54: Test timeout computed to be: 10000000 54/140 Test #54: Coxeter_triangulation_manifold_tracing_flat_torus_with_boundary_example ..................... Passed 2.52 sec test 55 Start 55: Coxeter_triangulation_manifold_tracing_custom_function_example 55: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation/Coxeter_triangulation_manifold_tracing_custom_function_example 55: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation 55: Test timeout computed to be: 10000000 55/140 Test #55: Coxeter_triangulation_manifold_tracing_custom_function_example .............................. Passed 6.04 sec test 56 Start 56: Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example 56: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation/Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example 56: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Coxeter_triangulation 56: Test timeout computed to be: 10000000 56: Vertices: 56: 0 : (-0.680375, 0.523483) 56: 1 : (0.147642, 0.887879) 56: 2 : (-0.847996, 0.30801) 56: 3 : (-0.680375, -0.461325) 56: 4 : (-0.881369, 0.0951903) 56: 5 : (0.319625, -0.7709) 56: 6 : (-0.364269, -0.760962) 56: 7 : (0.319625, 0.889605) 56: 8 : (0.415344, 0.843848) 56: 9 : (0.579487, 0.638553) 56: 10 : (0.812453, -0.0815816) 56: 11 : (0.638494, -0.550215) 56: Edges: 56: 4 2 56: 4 3 56: 3 6 56: 6 5 56: 5 11 56: 2 0 56: 0 1 56: 10 9 56: 10 11 56: 1 7 56: 7 8 56: 8 9 56/140 Test #56: Coxeter_triangulation_cell_complex_from_basic_circle_manifold_example ....................... Passed 0.00 sec test 57 Start 57: Persistence_representations_example_landscape_on_grid 57: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/Persistence_representations_example_landscape_on_grid 57: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations 57: Test timeout computed to be: 10000000 57: Integral of the first landscape : 9.075 57: Integral of the second landscape : 21.78 57: l1 : 0 : 57: 0.55 : 0.55 57: 1.1 : 1.1 0.55 57: 1.65 : 1.65 57: 2.2 : 1.1 57: 2.75 : 0.55 57: 3.3 : 0.55 57: 3.85 : 1.1 57: 4.4 : 1.65 57: 4.95 : 2.2 57: 5.5 : 1.65 57: 6.05 : 1.1 0.55 57: 6.6 : 1.1 0.55 57: 7.15 : 0.55 57: 7.7 : 57: 8.25 : 57: 8.8 : 57: 9.35 : 57: 9.9 : 57: 10.45 : 57: 11 : 57: 57: l2 : 0 : 57: 0.55 : 57: 1.1 : 0.55 57: 1.65 : 1.1 57: 2.2 : 1.65 0.55 57: 2.75 : 2.2 1.1 57: 3.3 : 1.65 1.65 0.55 57: 3.85 : 2.2 1.1 1.1 57: 4.4 : 2.75 0.55 0.55 57: 4.95 : 3.3 57: 5.5 : 2.75 57: 6.05 : 2.2 0.55 57: 6.6 : 1.65 1.1 57: 7.15 : 1.65 1.1 57: 7.7 : 2.2 0.55 57: 8.25 : 1.65 57: 8.8 : 1.1 57: 9.35 : 0.55 57: 9.9 : 57: 10.45 : 57: 11 : 57: 57: Maximum of l1 : 2.2 57: Maximum of l2 : 3.3 57: L^1 Norm of l1 : 9.075 57: L^1 Norm of l2 : 21.78 57: average : 0 : 57: 0.55 : 0.275 57: 1.1 : 0.825 0.275 57: 1.65 : 1.375 57: 2.2 : 1.375 0.275 57: 2.75 : 1.375 0.55 57: 3.3 : 1.1 0.825 0.275 57: 3.85 : 1.65 0.55 0.55 57: 4.4 : 2.2 0.275 0.275 57: 4.95 : 2.75 57: 5.5 : 2.2 57: 6.05 : 1.65 0.55 57: 6.6 : 1.375 0.825 57: 7.15 : 1.1 0.55 57: 7.7 : 1.1 0.275 57: 8.25 : 0.825 57: 8.8 : 0.55 57: 9.35 : 0.275 57: 9.9 : 57: 10.45 : 57: 11 : 57: 57: Distance : 15.125 57: Scalar product : 16.998 57: To visualize, install gnuplot and type the command: gnuplot -persist -e "load 'average_landscape_GnuplotScript'" 57/140 Test #57: Persistence_representations_example_landscape_on_grid ....................................... Passed 0.00 sec test 58 Start 58: Persistence_representations_example_landscape 58: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/Persistence_representations_example_landscape 58: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations 58: Test timeout computed to be: 10000000 58: Integral of the first landscape : 11.5 58: Integral of the second landscape : 23.5 58: l1 : Lambda_0: 58: -inf , 0 58: 0 , 0 58: 2 , 2 58: 3.5 , 0.5 58: 5.5 , 2.5 58: 8 , 0 58: +inf , 0 58: Lambda_1: 58: -inf , 0 58: 1 , 0 58: 1.5 , 0.5 58: 2 , 0 58: 3 , 0 58: 3.5 , 0.5 58: 4 , 0 58: 6 , 0 58: 7 , 1 58: 8 , 0 58: +inf , 0 58: 58: l2 : Lambda_0: 58: -inf , 0 58: 1 , 0 58: 3.5 , 2.5 58: 4 , 2 58: 5.5 , 3.5 58: 7.5 , 1.5 58: 8 , 2 58: 10 , 0 58: +inf , 0 58: Lambda_1: 58: -inf , 0 58: 2 , 0 58: 4 , 2 58: 6 , 0 58: 7.5 , 1.5 58: 9 , 0 58: +inf , 0 58: Lambda_2: 58: -inf , 0 58: 3 , 0 58: 4 , 1 58: 5 , 0 58: +inf , 0 58: 58: sum : Lambda_0: 58: -inf , 0 58: 0 , 0 58: 1 , 1 58: 2 , 3 58: 3.5 , 3 58: 4 , 3 58: 5.5 , 6 58: 7.5 , 2 58: 8 , 2 58: 10 , 0 58: +inf , 0 58: Lambda_1: 58: -inf , 0 58: 1 , 0 58: 1.5 , 0.5 58: 2 , 0 58: 3 , 1 58: 3.5 , 2 58: 4 , 2 58: 6 , 0 58: 7 , 2 58: 7.5 , 2 58: 8 , 1 58: 9 , 0 58: +inf , 0 58: Lambda_2: 58: -inf , 0 58: 3 , 0 58: 4 , 1 58: 5 , 0 58: +inf , 0 58: 58: Maximum of l1 : 2.5 58: Maximum of l2 : 3.5 58: L^1 Norm of l1 : 11.5 58: L^1 Norm of l2 : 23.5 58: average : Lambda_0: 58: -inf , 0 58: 0 , 0 58: 1 , 0.5 58: 2 , 1.5 58: 3.5 , 1.5 58: 4 , 1.5 58: 5.5 , 3 58: 7.5 , 1 58: 8 , 1 58: 10 , 0 58: +inf , 0 58: Lambda_1: 58: -inf , 0 58: 1 , 0 58: 1.5 , 0.25 58: 2 , 0 58: 3 , 0.5 58: 3.5 , 1 58: 4 , 1 58: 6 , 0 58: 7 , 1 58: 7.5 , 1 58: 8 , 0.5 58: 9 , 0 58: +inf , 0 58: Lambda_2: 58: -inf , 0 58: 3 , 0 58: 4 , 0.5 58: 5 , 0 58: +inf , 0 58: 58: Distance : 16 58: Scalar product : 21.875 58: To visualize, install gnuplot and type the command: gnuplot -persist -e "load 'average_landscape_GnuplotScript'" 58/140 Test #58: Persistence_representations_example_landscape ............................................... Passed 0.00 sec test 59 Start 59: Persistence_representations_example_intervals 59: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/Persistence_representations_example_intervals "/build/gudhi-3.7.1+dfsg/build/userversion/data/persistence_diagram/first.pers" 59: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations 59: Test timeout computed to be: 10000000 59: Birth-death range : 2.7 34.974 59: Length of ten dominant intervals : 59: 4.4 59: 1 59: 0.774 59: Here are the dominant intervals : 59: ( 9.6,14 59: ( 2.7,3.7 59: ( 34.2,34.974 59: Here is the histogram of barcode's length : 59: 0 1 1 0 0 0 0 0 0 1 59: Cumulative histogram : 59: 0 1 2 2 2 2 2 2 2 3 59: Characteristic function of diagram : 59: 0 0 14.2006 0 0 0 0 0 0 2.49801 59: Cumulative characteristic function of diagram : 59: 0 0 14.2006 14.2006 14.2006 14.2006 14.2006 14.2006 14.2006 16.6986 59: Persistence Betti numbers 59: 2.7 1 59: 3.7 0 59: 9.6 1 59: 14 0 59: 34.2 1 59: 34.974 0 59/140 Test #59: Persistence_representations_example_intervals ............................................... Passed 0.00 sec test 60 Start 60: Persistence_representations_example_vectors 60: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/Persistence_representations_example_vectors 60: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations 60: Test timeout computed to be: 10000000 60: v1 : 3.53553 2.82843 2.82843 1.41421 1.41421 1.41421 0.707107 0.707107 0.707107 0.707107 60: v2 : 4.94975 3.53553 3.16228 2.82843 2.82843 2.82843 1.41421 1.41421 1.41421 1.41421 60: Average : 4.24264 3.18198 2.99535 2.12132 2.12132 2.12132 1.06066 1.06066 1.06066 1.06066 60: l^1 distance : 9.52624 60: Scalar product of l1 and l2 : 52.4443 60: To visualize, install gnuplot and type the command: gnuplot -persist -e "load 'plot_of_vector_representation_GnuplotScript'" 60/140 Test #60: Persistence_representations_example_vectors ................................................. Passed 0.00 sec test 61 Start 61: Persistence_representations_example_heat_maps 61: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/Persistence_representations_example_heat_maps 61: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations 61: Test timeout computed to be: 10000000 61: The L^1 distance is : 4.54314 61: Scalar product is : 0.0401617 61: Scalar product computed with exact 2D kernel on grid is : 2.91157 61: Scalar product computed with exact 2D kernel is : 0.160898 61/140 Test #61: Persistence_representations_example_heat_maps ............................................... Passed 0.00 sec test 62 Start 62: Sliced_Wasserstein 62: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations/Sliced_Wasserstein 62: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistence_representations 62: Test timeout computed to be: 10000000 62: Approx SW kernel: 0.0693743 62: Exact SW kernel: 0.0692879 62: Distance induced by approx SW kernel: 1.36428 62: Distance induced by exact SW kernel: 1.36432 62/140 Test #62: Sliced_Wasserstein .......................................................................... Passed 0.01 sec test 63 Start 63: Persistence_representation_utilities_create_pssk 63: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/create_pssk "10" "-1" "-1" "4" "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers" 63: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 63: Test timeout computed to be: 10000000 63: This program creates PSSK files (*.pssk) of persistence diagrams files (*.pers) provided as an input. 63: The first parameter of a program is an integer, a size of a grid. 63: The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 63: The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number of pixels. 63: The fifth parameter of this program is a dimension of persistence that will be used in creation of the PSSK.If your input files contains persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the first parameter to -1. 63: The remaining parameters are the names of files with persistence diagrams. 63: Creating a PSSK based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers 63: Creating a PSSK based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers 63/140 Test #63: Persistence_representation_utilities_create_pssk ............................................ Passed 0.01 sec test 64 Start 64: Persistence_representation_utilities_create_p_h_m_weighted_by_arctan_of_their_persistence 64: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence "10" "-1" "-1" "4" "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers" 64: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 64: Test timeout computed to be: 10000000 64: This program creates persistence heat map files (*.mps) of persistence diagrams files (*.pers) provided as an input.The Gaussian kernels are weighted by the arc tangential of their persistence. 64: The first parameter of a program is an integer, a size of a grid. 64: The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 64: The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number of pixels. 64: The fifth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the fifth parameter to -1. 64: The remaining parameters are the names of files with persistence diagrams. 64: Creating a heat map based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers 64: Creating a heat map based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers 64/140 Test #64: Persistence_representation_utilities_create_p_h_m_weighted_by_arctan_of_their_persistence ... Passed 0.00 sec test 65 Start 65: Persistence_representation_utilities_create_p_h_m_weighted_by_distance_from_diagonal 65: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal "10" "-1" "-1" "4" "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers" 65: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 65: Test timeout computed to be: 10000000 65: This program creates persistence heat map files (*.mps) of persistence diagrams files (*.pers) provided as an input.The Gaussian kernels are weighted by the distance of a center from the diagonal. 65: The first parameter of a program is an integer, a size of a grid. 65: The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 65: The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number of pixels. 65: The fifth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the fifth parameter to -1. 65: The remaining parameters are the names of files with persistence diagrams. 65: Creating a heat map based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers 65: Creating a heat map based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers 65/140 Test #65: Persistence_representation_utilities_create_p_h_m_weighted_by_distance_from_diagonal ........ Passed 0.00 sec test 66 Start 66: Persistence_representation_utilities_create_p_h_m_weighted_by_squared_diag_distance 66: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance "10" "-1" "-1" "4" "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers" 66: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 66: Test timeout computed to be: 10000000 66: This program creates persistence heat map files (*.mps) of persistence diagrams files (*.pers) provided as an input.The Gaussian kernels are weighted by the square of distance of a center from the diagonal. 66: The first parameter of a program is an integer, a size of a grid. 66: The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 66: The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number of pixels. 66: The fifth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the fifth parameter to -1. 66: The remaining parameters are the names of files with persistence diagrams. 66: Creating a heat map based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers 66: Creating a heat map based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers 66/140 Test #66: Persistence_representation_utilities_create_p_h_m_weighted_by_squared_diag_distance ......... Passed 0.00 sec test 67 Start 67: Persistence_representation_utilities_create_persistence_heat_maps 67: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps "10" "0" "35" "10" "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers" 67: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 67: Test timeout computed to be: 10000000 67: This program creates persistence heat map files (*.mps) of persistence diagrams files (*.pers) provided as an input. 67: The first parameter of a program is an integer, a size of a grid. 67: The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 67: The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number of pixels. 67: The fifth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the fifth parameter to -1. 67: The remaining parameters are the names of files with persistence diagrams. 67: Creating a heat map based on file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers 67: Creating a heat map based on file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers 67/140 Test #67: Persistence_representation_utilities_create_persistence_heat_maps ........................... Passed 0.00 sec test 68 Start 68: Persistence_representation_utilities_plot_persistence_heat_map_first 68: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers.mps" 68: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 68: Test timeout computed to be: 10000000 68: This program creates a gnuplot script from a persistence heat maps stored in a file (the file needs to be created beforehand). Please call the code with the name of a single heat maps file 68: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers.mps_GnuplotScript'" 68/140 Test #68: Persistence_representation_utilities_plot_persistence_heat_map_first ........................ Passed 0.00 sec test 69 Start 69: Persistence_representation_utilities_average_persistence_heat_maps 69: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers.mps" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers.mps" 69: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 69: Test timeout computed to be: 10000000 69: This program computes average of persistence heat maps stored in files (the files needs to be created beforehand). 69: The parameters of this programs are names of files with persistence heat maps. 69: Average can be found in 'average.mps' file 69/140 Test #69: Persistence_representation_utilities_average_persistence_heat_maps .......................... Passed 0.00 sec test 70 Start 70: Persistence_representation_utilities_compute_distance_of_persistence_heat_maps 70: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers.mps" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers.mps" 70: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 70: Test timeout computed to be: 10000000 70: This program computes distance of persistence heat maps stored in files (the files needs to be created beforehand). 70: The first parameter of a program is an integer p. The program compute L^p distance of the two heat maps. For L^infty distance choose p = -1. 70: The remaining parameters of this program are names of files with persistence heat maps. 70: 110 70: Distance can be found in 'distance.mps' file 70/140 Test #70: Persistence_representation_utilities_compute_distance_of_persistence_heat_maps .............. Passed 0.00 sec test 71 Start 71: Persistence_representation_utilities_compute_scalar_product_of_persistence_heat_maps 71: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../first.pers.mps" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps/../second.pers.mps" 71: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_heat_maps 71: Test timeout computed to be: 10000000 71: This program computes scalar product of persistence heat maps stored in a file (the file needs to be created beforehand). 71: The parameters of this programs are names of files with persistence heat maps. 71: 0.0202966 0.0159094 71: 0.0159094 0.0142823 71: Distance can be found in 'scalar_product.mps' file 71/140 Test #71: Persistence_representation_utilities_compute_scalar_product_of_persistence_heat_maps ........ Passed 0.00 sec test 72 Start 72: Persistence_representation_utilities_plot_histogram_of_intervals_lengths 72: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers" "-1" 72: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals 72: Test timeout computed to be: 10000000 72: This program computes a histogram of barcode's length. A number of bins in the histogram is a parameter of this program. 72: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers_GnuplotScript'" 72/140 Test #72: Persistence_representation_utilities_plot_histogram_of_intervals_lengths .................... Passed 0.00 sec test 73 Start 73: Persistence_representation_utilities_plot_persistence_intervals_first 73: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers" 73: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals 73: Test timeout computed to be: 10000000 73: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers_GnuplotScript'" 73/140 Test #73: Persistence_representation_utilities_plot_persistence_intervals_first ....................... Passed 0.00 sec test 74 Start 74: Persistence_representation_utilities_plot_persistence_Betti_numbers_first 74: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers" 74: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals 74: Test timeout computed to be: 10000000 74: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers_GnuplotScript'" 74/140 Test #74: Persistence_representation_utilities_plot_persistence_Betti_numbers_first ................... Passed 0.00 sec test 75 Start 75: Persistence_representation_utilities_compute_birth_death_range_in_persistence_diagram 75: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../second.pers" 75: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals 75: Test timeout computed to be: 10000000 75: This program computes the range of birth and death times of persistence pairs in diagrams provided as an input. 75: The first parameter is the dimension of persistence to be used to create persistence intervals. If your file contains the information about dimension of persistence pairs, please provide here the dimension of persistence pairs you want to use. If your input files consist only of birth-death pairs, please set this first parameter to -1. 75: The remaining parameters of the program are the names of files with persistence diagrams. 75: Creating diagram based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers 75: Creating diagram based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../second.pers 75: Birth-death range : min: 2.7, max: 34.974 75/140 Test #75: Persistence_representation_utilities_compute_birth_death_range_in_persistence_diagram ....... Passed 0.00 sec test 76 Start 76: Persistence_representation_utilities_compute_number_of_dominant_intervals 76: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers" "-1" "2" 76: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals 76: Test timeout computed to be: 10000000 76: This program compute the dominant intervals. A number of intervals to be displayed is a parameter of this program. 76: Here are the dominant intervals : 76: 9.6,14 76: 2.7,3.7 76/140 Test #76: Persistence_representation_utilities_compute_number_of_dominant_intervals ................... Passed 0.00 sec test 77 Start 77: Persistence_representation_utilities_compute_bottleneck_distance 77: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals/../second.pers" 77: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_intervals 77: Test timeout computed to be: 10000000 77: This program computes the bottleneck distance of persistence pairs in diagrams provided as an input. 77: The first parameter is the dimension of persistence to be used to create persistence intervals. If your file contains the information about dimension of persistence pairs, please provide here the dimension of persistence pairs you want to use. If your input files consist only of birth-death pairs, please set this first parameter to -1. 77: The remaining parameters of the program are the names of files with persistence diagrams. 77: 0 0.75 77: 0.75 0 77: Distance can be found in 'distance.itv' file 77/140 Test #77: Persistence_representation_utilities_compute_bottleneck_distance ............................ Passed 0.00 sec test 78 Start 78: Persistence_representation_utilities_create_landscapes 78: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/create_landscapes "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../second.pers" 78: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes 78: Test timeout computed to be: 10000000 78: This program creates persistence landscapes files (*.land) of persistence diagrams files (*.pers) provided as an input. 78: The first parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a first parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the first parameter to -1. 78: The remaining parameters are the names of files with persistence diagrams. 78: Creating a landscape based on file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers 78: Creating a landscape based on file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../second.pers 78/140 Test #78: Persistence_representation_utilities_create_landscapes ...................................... Passed 0.00 sec test 79 Start 79: Persistence_representation_utilities_plot_landscapes_first 79: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/plot_landscapes "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers.land" 79: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes 79: Test timeout computed to be: 10000000 79: This program creates a gnuplot script from a persistence landscape stored in a file (the file needs to be created beforehand). Please call the code with the name of a single landscape file. 79: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers.land_GnuplotScript'" 79/140 Test #79: Persistence_representation_utilities_plot_landscapes_first .................................. Passed 0.00 sec test 80 Start 80: Persistence_representation_utilities_average_landscapes 80: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/average_landscapes "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers.land" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../second.pers.land" 80: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes 80: Test timeout computed to be: 10000000 80: This program computes average of persistence landscapes stored in files (the files needs to be created beforehand). 80: The parameters of this programs are names of files with persistence landscapes. 80: Average can be found in 'average.land' file 80/140 Test #80: Persistence_representation_utilities_average_landscapes ..................................... Passed 0.00 sec test 81 Start 81: Persistence_representation_utilities_compute_distance_of_landscapes 81: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers.land" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../second.pers.land" 81: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes 81: Test timeout computed to be: 10000000 81: This program computes distance of persistence landscapes stored in files (the files needs to be created beforehand). 81: The first parameter of a program is an integer p. The program compute L^p distance of the two heat maps. For L^infty distance choose p = -1. 81: The remaining parameters of this program are names of files with persistence landscapes. 81: inf 81: Distance can be found in 'distance.land' file 81/140 Test #81: Persistence_representation_utilities_compute_distance_of_landscapes ......................... Passed 0.00 sec test 82 Start 82: Persistence_representation_utilities_compute_scalar_product_of_landscapes 82: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../first.pers.land" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes/../second.pers.land" 82: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes 82: Test timeout computed to be: 10000000 82: This program computes scalar product of persistence landscapes stored in a file (the file needs to be created beforehand). 82: The parameters of this programs are names of files with persistence landscapes. 82: 7.22064 7.68269 82: 7.68269 8.48568 82: Distance can be found in 'scalar_product.land' file 82/140 Test #82: Persistence_representation_utilities_compute_scalar_product_of_landscapes ................... Passed 0.00 sec test 83 Start 83: Persistence_representation_utilities_create_landscapes_on_grid 83: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid "100" "0" "35" "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../second.pers" 83: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid 83: Test timeout computed to be: 10000000 83: This program creates persistence landscapes on grid files (*.g_land) of persistence diagrams files (*.pers) provided as an input. 83: The first parameter of a program is an integer, a size of a grid. 83: The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 83: The fourth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a fourth parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the fourth parameter to -1. 83: The remaining parameters are the names of files with persistence diagrams. 83: Creating persistence landscape on a grid based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers 83: Creating persistence landscape on a grid based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../second.pers 83/140 Test #83: Persistence_representation_utilities_create_landscapes_on_grid .............................. Passed 0.00 sec test 84 Start 84: Persistence_representation_utilities_plot_landscapes_on_grid_first 84: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers.g_land" 84: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid 84: Test timeout computed to be: 10000000 84: This program creates a gnuplot script from a persistence landscape on grid stored in a file (the file needs to be created beforehand). Please call the code with the name of a single landscape on grid file. 84: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers.g_land_GnuplotScript'" 84/140 Test #84: Persistence_representation_utilities_plot_landscapes_on_grid_first .......................... Passed 0.00 sec test 85 Start 85: Persistence_representation_utilities_average_landscapes_on_grid 85: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers.g_land" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../second.pers.g_land" 85: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid 85: Test timeout computed to be: 10000000 85: This program computes average of persistence landscapes on grid stored in files (the files needs to be created beforehand). 85: The parameters of this programs are names of files with persistence landscapes on grid. 85: Average can be found in 'average.g_land' file 85/140 Test #85: Persistence_representation_utilities_average_landscapes_on_grid ............................. Passed 0.00 sec test 86 Start 86: Persistence_representation_utilities_compute_distance_of_landscapes_on_grid 86: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers.g_land" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../second.pers.g_land" 86: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid 86: Test timeout computed to be: 10000000 86: This program computes distance of persistence landscapes on grid stored in files (the files needs to be created beforehand). 86: The first parameter of a program is an integer p. The program compute L^p distance of the two heat maps. For L^infty distance choose p = -1. 86: The remaining parameters of this program are names of files with persistence landscapes on grid. 86: 0 86: Distance can be found in 'distance.g_land' file 86/140 Test #86: Persistence_representation_utilities_compute_distance_of_landscapes_on_grid ................. Passed 0.00 sec test 87 Start 87: Persistence_representation_utilities_compute_scalar_product_of_landscapes_on_grid 87: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../first.pers.g_land" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid/../second.pers.g_land" 87: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_landscapes_on_grid 87: Test timeout computed to be: 10000000 87: This program computes scalar product of persistence landscapes on grid stored in a file (the file needs to be created beforehand). 87: The parameters of this programs are names of files with persistence landscapes on grid. 87: 6.23117 6.18115 87: 6.18115 6.40267 87: Distance can be found in 'scalar_product.g_land' file 87/140 Test #87: Persistence_representation_utilities_compute_scalar_product_of_landscapes_on_grid ........... Passed 0.00 sec test 88 Start 88: Persistence_representation_utilities_create_persistence_vectors 88: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors "-1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../second.pers" 88: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors 88: Test timeout computed to be: 10000000 88: This program creates persistence vectors files (*.vect) of persistence diagrams files (*.pers) provided as an input. 88: The first parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.If your input files contains persistence pairs of various dimension, as a first parameter of the procedure please provide the dimension of persistence you want to use.If in your files there are only birth-death pairs of the same dimension, set the first parameter to -1. 88: The remaining parameters are the names of files with persistence diagrams. 88: The remaining parameters are the names of files with persistence diagrams. 88: Creating persistence vectors based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers 88: Creating persistence vectors based on a file : /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../second.pers 88/140 Test #88: Persistence_representation_utilities_create_persistence_vectors ............................. Passed 0.00 sec test 89 Start 89: Persistence_representation_utilities_plot_persistence_vectors_first 89: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers.vect" 89: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors 89: Test timeout computed to be: 10000000 89: This program create a Gnuplot script to plot persistence vector. Please call this program with the name of file with persistence vector. 89: To visualize, install gnuplot and type the command: gnuplot -persist -e "load '/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers.vect_GnuplotScript'" 89/140 Test #89: Persistence_representation_utilities_plot_persistence_vectors_first ......................... Passed 0.00 sec test 90 Start 90: Persistence_representation_utilities_average_persistence_vectors 90: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers.vect" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../second.pers.vect" 90: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors 90: Test timeout computed to be: 10000000 90: This program computes average of persistence vectors stored in files (the files needs to be created beforehand). 90: The parameters of this programs are names of files with persistence vectors. 90: Done 90/140 Test #90: Persistence_representation_utilities_average_persistence_vectors ............................ Passed 0.00 sec test 91 Start 91: Persistence_representation_utilities_compute_distance_of_persistence_vectors 91: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers.vect" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../second.pers.vect" 91: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors 91: Test timeout computed to be: 10000000 91: This program compute distance of persistence vectors stored in a file (the file needs to be created beforehand). 91: The first parameter of a program is an integer p. The program compute l^p distance of the vectors. For l^infty distance choose p = -1. 91: The remaining parameters of this programs are names of files with persistence vectors. 91: 0 91: Distance can be found in 'distance.vect' file 91/140 Test #91: Persistence_representation_utilities_compute_distance_of_persistence_vectors ................ Passed 0.00 sec test 92 Start 92: Persistence_representation_utilities_compute_scalar_product_of_persistence_vectors 92: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../first.pers.vect" "/build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors/../second.pers.vect" 92: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Persistence_representations/persistence_vectors 92: Test timeout computed to be: 10000000 92: This program computes scalar product of persistence vectors stored in a file (the file needs to be created beforehand). 92: The parameters of this programs are names of files with persistence vectors. 92: 11.5786 11.77 92: 11.77 13.3025 92: Distance can be found in 'scalar_product.vect' file 92/140 Test #92: Persistence_representation_utilities_compute_scalar_product_of_persistence_vectors .......... Passed 0.00 sec test 93 Start 93: Persistent_cohomology_example_plain_homology 93: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/plain_homology 93: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 93: Test timeout computed to be: 10000000 93: 2 0 0 inf 93: 2 0 0 inf 93: 2 1 0 inf 93: 2 1 0 inf 93: 93: The Betti numbers are : b0 = 2 ; b1 = 2 ; b2 = 0 ; 93/140 Test #93: Persistent_cohomology_example_plain_homology ................................................ Passed 0.00 sec test 94 Start 94: Persistent_cohomology_example_from_simple_simplex_tree 94: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/persistence_from_simple_simplex_tree "2" "0" 94: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 94: Test timeout computed to be: 10000000 94: ******************************************************************** 94: TEST OF INSERTION 94: - INSERT (0,1,2) 94: - INSERT 3 94: - INSERT (0,3) 94: - INSERT (0,1) (already inserted) 94: - INSERT (3,4,5) 94: - INSERT (0,1,6,7) 94: - INSERT (4,5,8,9) 94: - INSERT (9,10,11) 94: - INSERT (2,10,12) 94: - INSERT (11,6) 94: - INSERT (13,14,15) 94: The complex contains 58 simplices - 16 vertices 94: - dimension 3 94: 94: 94: Iterator on Simplices in the filtration, with [filtration value]: 94: ************************************************************** 94: strict graph G { 94: [0.1] 3 -- ; 94: [0.2] 0 -- ; 94: [0.2] 1 -- ; 94: [0.2] 1 -- 0 -- ; 94: [0.2] 3 -- 0 -- ; 94: [0.2] 6 -- ; 94: [0.2] 11 -- ; 94: [0.2] 11 -- 6 -- ; 94: [0.25] 13 -- ; 94: [0.25] 14 -- ; 94: [0.25] 14 -- 13 -- ; 94: [0.25] 15 -- ; 94: [0.25] 15 -- 13 -- ; 94: [0.25] 15 -- 14 -- ; 94: [0.25] 15 -- 14 -- 13 -- ; 94: [0.3] 2 -- ; 94: [0.3] 2 -- 0 -- ; 94: [0.3] 2 -- 1 -- ; 94: [0.3] 2 -- 1 -- 0 -- ; 94: [0.3] 4 -- ; 94: [0.3] 4 -- 3 -- ; 94: [0.3] 5 -- ; 94: [0.3] 5 -- 3 -- ; 94: [0.3] 5 -- 4 -- ; 94: [0.3] 5 -- 4 -- 3 -- ; 94: [0.3] 9 -- ; 94: [0.3] 10 -- ; 94: [0.3] 10 -- 2 -- ; 94: [0.3] 10 -- 9 -- ; 94: [0.3] 11 -- 9 -- ; 94: [0.3] 11 -- 10 -- ; 94: [0.3] 11 -- 10 -- 9 -- ; 94: [0.3] 12 -- ; 94: [0.3] 12 -- 2 -- ; 94: [0.3] 12 -- 10 -- ; 94: [0.3] 12 -- 10 -- 2 -- ; 94: [0.4] 6 -- 0 -- ; 94: [0.4] 6 -- 1 -- ; 94: [0.4] 6 -- 1 -- 0 -- ; 94: [0.4] 7 -- ; 94: [0.4] 7 -- 0 -- ; 94: [0.4] 7 -- 1 -- ; 94: [0.4] 7 -- 1 -- 0 -- ; 94: [0.4] 7 -- 6 -- ; 94: [0.4] 7 -- 6 -- 0 -- ; 94: [0.4] 7 -- 6 -- 1 -- ; 94: [0.4] 7 -- 6 -- 1 -- 0 -- ; 94: [0.4] 8 -- ; 94: [0.4] 8 -- 4 -- ; 94: [0.4] 8 -- 5 -- ; 94: [0.4] 8 -- 5 -- 4 -- ; 94: [0.4] 9 -- 4 -- ; 94: [0.4] 9 -- 5 -- ; 94: [0.4] 9 -- 5 -- 4 -- ; 94: [0.4] 9 -- 8 -- ; 94: [0.4] 9 -- 8 -- 4 -- ; 94: [0.4] 9 -- 8 -- 5 -- ; 94: [0.4] 9 -- 8 -- 5 -- 4 -- ; 94: } 94: ************************************************************** 94: 2 0 0.25 inf 94: 2 0 0.1 inf 94: 2 1 0.4 inf 94: 2 1 0.4 inf 94: 2 0 0.2 0.3 94/140 Test #94: Persistent_cohomology_example_from_simple_simplex_tree ...................................... Passed 0.00 sec test 95 Start 95: Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D 95: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/rips_persistence_step_by_step "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" 95: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 95: Test timeout computed to be: 10000000 95: The complex contains 177838 simplices 95: and has dimension 3 95: 3 0 0 inf 95: 3 1 0.0983494 inf 95: 3 1 0.104347 inf 95: 3 2 0.138335 inf 95/140 Test #95: Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D ............................. Passed 0.21 sec test 96 Start 96: Persistent_cohomology_example_via_boundary_matrix 96: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/rips_persistence_via_boundary_matrix "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/Kl.off" "-r" "0.16" "-d" "3" "-p" "3" "-m" "100" 96: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 96: Test timeout computed to be: 10000000 96: The complex contains 464418 simplices 96: and has dimension 3 96: 3 0 0 inf 96: 3 1 0.0702103 inf 96/140 Test #96: Persistent_cohomology_example_via_boundary_matrix ........................................... Passed 2.16 sec test 97 Start 97: Persistent_cohomology_example_from_file_3_2_0 97: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/persistence_from_file "/build/gudhi-3.7.1+dfsg/build/userversion/data/filtered_simplicial_complex/Klein_bottle_complex.fsc" "-p" "2" "-m" "0" 97: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 97: Test timeout computed to be: 10000000 97: Simplex_tree from file=/build/gudhi-3.7.1+dfsg/build/userversion/data/filtered_simplicial_complex/Klein_bottle_complex.fsc - output_file= 97: - p=2 - min_persistence=0 97: The complex contains 55 simplices 97: - dimension 2 97: 2 1 1.45 inf 97: 2 1 1.23 inf 97: 2 0 0.01 inf 97: 2 0 0 inf 97: 2 0 0.02 1.12 97: 2 0 0.03 1.13 97: 2 0 0.09 1.19 97: 2 0 0.08 1.18 97: 2 0 0.04 1.14 97: 2 0 0.05 1.15 97: 2 0 0.06 1.16 97: 2 0 0.07 1.17 97: 2 1 1.68 2.678 97: 2 1 1.28 2.238 97: 2 1 1.56 2.456 97: 2 1 1.69 2.569 97: 2 1 1.58 2.458 97: 2 1 1.36 2.236 97: 2 1 1.26 2.126 97: 2 1 1.29 2.129 97: 2 1 1.78 2.578 97: 2 1 1.37 2.137 97: 2 1 1.38 2.138 97: 2 1 1.46 2.146 97: 2 1 1.48 2.148 97: 2 1 1.67 2.267 97: 2 1 1.57 2.157 97: 2 1 1.59 2.159 97: 2 1 1.89 2.289 97/140 Test #97: Persistent_cohomology_example_from_file_3_2_0 ............................................... Passed 0.02 sec test 98 Start 98: Persistent_cohomology_example_from_file_3_3_100 98: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/persistence_from_file "/build/gudhi-3.7.1+dfsg/build/userversion/data/filtered_simplicial_complex/Klein_bottle_complex.fsc" "-p" "3" "-m" "100" 98: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 98: Test timeout computed to be: 10000000 98: Simplex_tree from file=/build/gudhi-3.7.1+dfsg/build/userversion/data/filtered_simplicial_complex/Klein_bottle_complex.fsc - output_file= 98: - p=3 - min_persistence=100 98: The complex contains 55 simplices 98: - dimension 2 98: 3 0 0 inf 98: 3 0 0.01 inf 98: 3 1 1.23 inf 98/140 Test #98: Persistent_cohomology_example_from_file_3_3_100 ............................................. Passed 0.01 sec test 99 Start 99: Persistent_cohomology_example_multifield_2_71 99: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/rips_multifield_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "2" "-q" "71" 99: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 99: Test timeout computed to be: 10000000 99: The complex contains 177838 simplices 99: and has dimension 3 99: 557940830126698960967415390 0 0 inf 99: 557940830126698960967415390 1 0.0983494 inf 99: 557940830126698960967415390 1 0.104347 inf 99: 557940830126698960967415390 2 0.138335 inf 99/140 Test #99: Persistent_cohomology_example_multifield_2_71 ............................................... Passed 0.44 sec test 100 Start 100: Persistent_cohomology_example_custom_persistence_sort 100: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology/custom_persistence_sort 100: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Persistent_cohomology 100: Test timeout computed to be: 10000000 100: Points size=3000 100: alpha_complex_from_points 100: simplex 100: simplex 100: Simplicial complex is of dimension 3 - 73360 simplices - 3000 vertices. 100: Simplex_tree dim: 3 100: 2 0.597053 inf 100: 2 0.534252 inf 100: 2 0.472832 inf 100: 2 0.400412 inf 100: 2 0.397031 inf 100: 1 0.0795996 0.417194 100: 1 0.0702367 0.401412 100: 1 0.0713226 0.394297 100: 1 0.0853758 0.391649 100: 1 0.0950316 0.399826 100: 1 0.0884407 0.393011 100: 1 0.0898722 0.385839 100: 1 0.0785172 0.371812 100: 1 0.0917191 0.383453 100: 1 0.0771105 0.353592 100: 1 0.067796 0.332299 100: 1 0.0735121 0.32904 100: 1 0.135084 0.387086 100: 1 0.0966006 0.34183 100: 1 0.102396 0.347237 100: 1 0.0777652 0.320265 100: 1 0.106999 0.347167 100: 1 0.0937832 0.327321 100: 1 0.0641926 0.297069 100: 1 0.0625257 0.294397 100: 1 0.0771513 0.304205 100: 1 0.0718941 0.283801 100: 1 0.120051 0.321879 100: 0 0 inf 100: 0 0 0.255147 100: The persistent Betti numbers in interval [0.40, 0.41] are : b0 = 1 ; b1 = 1 ; b2 = 1 ; 100: The Betti numbers are : b0 = 1 ; b1 = 0 ; b2 = 5 ; 100/140 Test #100: Persistent_cohomology_example_custom_persistence_sort ....................................... Passed 0.24 sec test 101 Start 101: Rips_complex_example_one_skeleton_from_points 101: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_one_skeleton_from_points 101: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 101: Test timeout computed to be: 10000000 101: Rips complex is of dimension 1 - 18 simplices - 7 vertices. 101: Iterator on Rips complex simplices in the filtration order, with [filtration value]: 101: ( 0 ) -> [0] 101: ( 1 ) -> [0] 101: ( 2 ) -> [0] 101: ( 3 ) -> [0] 101: ( 4 ) -> [0] 101: ( 5 ) -> [0] 101: ( 6 ) -> [0] 101: ( 3 2 ) -> [5] 101: ( 5 4 ) -> [5.38516] 101: ( 2 0 ) -> [5.83095] 101: ( 1 0 ) -> [6.08276] 101: ( 3 1 ) -> [6.32456] 101: ( 2 1 ) -> [6.7082] 101: ( 6 5 ) -> [7.28011] 101: ( 4 2 ) -> [8.94427] 101: ( 3 0 ) -> [9.43398] 101: ( 6 4 ) -> [9.48683] 101: ( 6 3 ) -> [11] 101/140 Test #101: Rips_complex_example_one_skeleton_from_points ............................................... Passed 0.00 sec test 102 Start 102: Rips_complex_example_one_skeleton_from_distance_matrix 102: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_one_skeleton_from_distance_matrix 102: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 102: Test timeout computed to be: 10000000 102: Rips complex is of dimension 1 - 15 simplices - 5 vertices. 102: Iterator on Rips complex simplices in the filtration order, with [filtration value]: 102: ( 0 ) -> [0] 102: ( 1 ) -> [0] 102: ( 2 ) -> [0] 102: ( 3 ) -> [0] 102: ( 4 ) -> [0] 102: ( 4 0 ) -> [0.11] 102: ( 2 1 ) -> [0.26] 102: ( 3 2 ) -> [0.28] 102: ( 4 3 ) -> [0.3] 102: ( 4 1 ) -> [0.39] 102: ( 2 0 ) -> [0.77] 102: ( 1 0 ) -> [0.94] 102: ( 4 2 ) -> [0.97] 102: ( 3 0 ) -> [0.99] 102: ( 3 1 ) -> [0.99] 102/140 Test #102: Rips_complex_example_one_skeleton_from_distance_matrix ...................................... Passed 0.00 sec test 103 Start 103: Rips_complex_example_sparse 103: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_sparse 103: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 103: Test timeout computed to be: 10000000 103: Sparse Rips complex is of dimension 2 - 19 simplices - 7 vertices. 103/140 Test #103: Rips_complex_example_sparse ................................................................. Passed 0.00 sec test 104 Start 104: Rips_complex_example_one_skeleton_rips_from_correlation_matrix 104: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_one_skeleton_rips_from_correlation_matrix 104: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 104: Test timeout computed to be: 10000000 104: Rips complex is of dimension 1 - 15 simplices - 5 vertices. 104: Iterator on Rips complex simplices in the filtration order, with [filtration value]: 104: ( 0 ) -> [0] 104: ( 1 ) -> [0] 104: ( 2 ) -> [0] 104: ( 3 ) -> [0] 104: ( 4 ) -> [0] 104: ( 4 0 ) -> [0.11] 104: ( 2 1 ) -> [0.26] 104: ( 3 2 ) -> [0.28] 104: ( 4 3 ) -> [0.3] 104: ( 4 1 ) -> [0.39] 104: ( 2 0 ) -> [0.77] 104: ( 1 0 ) -> [0.94] 104: ( 4 2 ) -> [0.97] 104: ( 3 0 ) -> [0.99] 104: ( 3 1 ) -> [0.99] 104/140 Test #104: Rips_complex_example_one_skeleton_rips_from_correlation_matrix .............................. Passed 0.00 sec test 105 Start 105: Rips_complex_example_from_off_doc_12_1 105: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" "12.0" "1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripsoffreader_result_12_1.txt" 105: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 105: Test timeout computed to be: 10000000 105/140 Test #105: Rips_complex_example_from_off_doc_12_1 ...................................................... Passed 0.00 sec test 106 Start 106: Rips_complex_example_from_off_doc_12_3 106: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/alphacomplexdoc.off" "12.0" "3" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripsoffreader_result_12_3.txt" 106: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 106: Test timeout computed to be: 10000000 106/140 Test #106: Rips_complex_example_from_off_doc_12_3 ...................................................... Passed 0.00 sec test 107 Start 107: Rips_complex_example_from_csv_distance_matrix_doc_12_1 107: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_from_csv_distance_matrix "/build/gudhi-3.7.1+dfsg/build/userversion/data/distance_matrix/full_square_distance_matrix.csv" "12.0" "1" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripscsvreader_result_12_1.txt" 107: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 107: Test timeout computed to be: 10000000 107/140 Test #107: Rips_complex_example_from_csv_distance_matrix_doc_12_1 ...................................... Passed 0.00 sec test 108 Start 108: Rips_complex_example_from_csv_distance_matrix_doc_12_3 108: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/Rips_complex_example_from_csv_distance_matrix "/build/gudhi-3.7.1+dfsg/build/userversion/data/distance_matrix/full_square_distance_matrix.csv" "12.0" "3" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripscsvreader_result_12_3.txt" 108: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 108: Test timeout computed to be: 10000000 108/140 Test #108: Rips_complex_example_from_csv_distance_matrix_doc_12_3 ...................................... Passed 0.00 sec test 109 Start 109: Rips_complex_example_from_off_doc_12_1_diff_files 109: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripsoffreader_result_12_1.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/one_skeleton_rips_for_doc.txt" 109: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 109: Test timeout computed to be: 10000000 109/140 Test #109: Rips_complex_example_from_off_doc_12_1_diff_files ........................................... Passed 0.00 sec test 110 Start 110: Rips_complex_example_from_off_doc_12_3_diff_files 110: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripsoffreader_result_12_3.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/full_skeleton_rips_for_doc.txt" 110: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 110: Test timeout computed to be: 10000000 110/140 Test #110: Rips_complex_example_from_off_doc_12_3_diff_files ........................................... Passed 0.00 sec test 111 Start 111: Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files 111: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripscsvreader_result_12_1.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/one_skeleton_rips_for_doc.txt" 111: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 111: Test timeout computed to be: 10000000 111/140 Test #111: Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files ........................... Passed 0.00 sec test 112 Start 112: Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files 112: Test command: /usr/bin/diff "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/ripscsvreader_result_12_3.txt" "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex/full_skeleton_rips_for_doc.txt" 112: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Rips_complex 112: Test timeout computed to be: 10000000 112/140 Test #112: Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files ........................... Passed 0.00 sec test 113 Start 113: Rips_complex_utility_from_rips_distance_matrix 113: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/rips_distance_matrix_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/distance_matrix/full_square_distance_matrix.csv" "-r" "1.0" "-d" "3" "-p" "3" "-m" "0" 113: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex 113: Test timeout computed to be: 10000000 113: The complex contains 7 simplices 113: and has dimension 0 113: 3 0 0 inf 113: 3 0 0 inf 113: 3 0 0 inf 113: 3 0 0 inf 113: 3 0 0 inf 113: 3 0 0 inf 113: 3 0 0 inf 113/140 Test #113: Rips_complex_utility_from_rips_distance_matrix .............................................. Passed 0.00 sec test 114 Start 114: Rips_complex_utility_from_rips_on_tore_3D 114: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/rips_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3" 114: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex 114: Test timeout computed to be: 10000000 114: The complex contains 177838 simplices 114: and has dimension 3 114: 3 0 0 inf 114: 3 1 0.0983494 inf 114: 3 1 0.104347 inf 114: 3 2 0.138335 inf 114/140 Test #114: Rips_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.18 sec test 115 Start 115: Rips_complex_utility_from_rips_correlation_matrix 115: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/rips_correlation_matrix_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/correlation_matrix/lower_triangular_correlation_matrix.csv" "-c" "0.3" "-d" "3" "-p" "3" "-m" "0" 115: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex 115: Test timeout computed to be: 10000000 115: The complex contains 56 simplices 115: and has dimension 3 115: 3 1 0.525684 0.523445 115: 3 0 1 0.976074 115: 3 0 1 0.936957 115: 3 0 1 0.910976 115: 3 0 1 0.825489 115: 3 0 1 0.717882 115: 3 0 1 -inf 115/140 Test #115: Rips_complex_utility_from_rips_correlation_matrix ........................................... Passed 0.00 sec test 116 Start 116: Sparse_rips_complex_utility_on_tore_3D 116: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex/sparse_rips_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-e" "0.5" "-m" "0.2" "-d" "3" "-p" "2" 116: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Rips_complex 116: Test timeout computed to be: 10000000 116: The complex contains 1290875 simplices 116: and has dimension 3 116: 2 0 0 inf 116: 2 1 0.522364 1.83591 116: 2 1 0.611267 1.78565 116: 2 1 0.643931 1.46305 116: 2 1 0.647214 1.45954 116: 2 0 0 0.740162 116: 2 0 0 0.72061 116: 2 0 0 0.694984 116: 2 0 0 0.682259 116: 2 0 0 0.662163 116: 2 0 0 0.662141 116: 2 0 0 0.649362 116: 2 0 0 0.644767 116: 2 0 0 0.644037 116: 2 0 0 0.643166 116: 2 0 0 0.637817 116: 2 1 0.647557 1.2799 116: 2 0 0 0.623942 116: 2 0 0 0.623586 116: 2 0 0 0.623047 116: 2 0 0 0.62058 116: 2 0 0 0.613256 116: 2 0 0 0.601587 116: 2 0 0 0.600972 116: 2 0 0 0.598391 116: 2 1 0.703258 1.30113 116: 2 0 0 0.597709 116: 2 0 0 0.595449 116: 2 0 0 0.592934 116: 2 0 0 0.586093 116: 2 0 0 0.584625 116: 2 0 0 0.582968 116: 2 0 0 0.579425 116: 2 0 0 0.568439 116: 2 0 0 0.567219 116: 2 0 0 0.564247 116: 2 0 0 0.560948 116: 2 0 0 0.559899 116: 2 0 0 0.557204 116: 2 0 0 0.551473 116: 2 0 0 0.549306 116: 2 0 0 0.548806 116: 2 0 0 0.543851 116: 2 0 0 0.540352 116: 2 0 0 0.538083 116: 2 0 0 0.535027 116: 2 0 0 0.533802 116: 2 0 0 0.529473 116: 2 1 0.754131 1.28281 116: 2 0 0 0.523473 116: 2 0 0 0.52142 116: 2 0 0 0.51479 116: 2 0 0 0.511312 116: 2 0 0 0.509494 116: 2 0 0 0.504512 116: 2 0 0 0.504037 116: 2 0 0 0.502347 116: 2 0 0 0.498256 116: 2 0 0 0.49744 116: 2 0 0 0.495687 116: 2 1 0.780851 1.27113 116: 2 0 0 0.488981 116: 2 0 0 0.487769 116: 2 0 0 0.479492 116: 2 0 0 0.479391 116: 2 0 0 0.476601 116: 2 0 0 0.476171 116: 2 0 0 0.474232 116: 2 2 1.4715 1.94517 116: 2 0 0 0.472879 116: 2 0 0 0.472496 116: 2 0 0 0.471946 116: 2 0 0 0.469085 116: 2 0 0 0.468763 116: 2 0 0 0.463868 116: 2 0 0 0.458062 116: 2 0 0 0.456104 116: 2 0 0 0.453232 116: 2 0 0 0.451791 116: 2 0 0 0.451542 116: 2 0 0 0.450147 116: 2 0 0 0.448963 116: 2 0 0 0.448374 116: 2 1 0.625467 1.06565 116: 2 0 0 0.438381 116: 2 0 0 0.437882 116: 2 0 0 0.437367 116: 2 0 0 0.429197 116: 2 0 0 0.429099 116: 2 0 0 0.42704 116: 2 0 0 0.426603 116: 2 0 0 0.423437 116: 2 0 0 0.422288 116: 2 0 0 0.421946 116: 2 0 0 0.419499 116: 2 0 0 0.417769 116: 2 1 0.799379 1.21651 116: 2 0 0 0.416777 116: 2 0 0 0.416061 116: 2 0 0 0.414679 116: 2 0 0 0.414448 116: 2 0 0 0.413875 116: 2 0 0 0.411544 116: 2 0 0 0.411337 116: 2 0 0 0.411176 116: 2 0 0 0.406383 116: 2 0 0 0.406372 116: 2 0 0 0.405769 116: 2 0 0 0.40442 116: 2 0 0 0.403846 116: 2 1 0.760219 1.16287 116: 2 0 0 0.401388 116: 2 0 0 0.395647 116: 2 0 0 0.394422 116: 2 0 0 0.394082 116: 2 0 0 0.389455 116: 2 1 0.816904 1.20493 116: 2 0 0 0.387991 116: 2 0 0 0.386693 116: 2 0 0 0.38661 116: 2 0 0 0.386067 116: 2 0 0 0.383727 116: 2 1 0.860223 1.24368 116: 2 0 0 0.383278 116: 2 0 0 0.38114 116: 2 0 0 0.380733 116: 2 0 0 0.379818 116: 2 0 0 0.379121 116: 2 0 0 0.374685 116: 2 0 0 0.374193 116: 2 0 0 0.373873 116: 2 0 0 0.3699 116: 2 1 0.744847 1.11278 116: 2 0 0 0.367295 116: 2 0 0 0.366952 116: 2 0 0 0.364051 116: 2 0 0 0.359789 116: 2 0 0 0.358723 116: 2 0 0 0.357917 116: 2 1 0.720357 1.07614 116: 2 0 0 0.354773 116: 2 0 0 0.348315 116: 2 0 0 0.346859 116: 2 0 0 0.346575 116: 2 1 0.754184 1.10027 116: 2 0 0 0.345069 116: 2 1 0.70094 1.04393 116: 2 0 0 0.338312 116: 2 0 0 0.337215 116: 2 0 0 0.337201 116: 2 0 0 0.335474 116: 2 0 0 0.333951 116: 2 0 0 0.333068 116: 2 0 0 0.331754 116: 2 0 0 0.331679 116: 2 0 0 0.329996 116: 2 0 0 0.326787 116: 2 0 0 0.326685 116: 2 0 0 0.326655 116: 2 0 0 0.324976 116: 2 1 0.833168 1.15632 116: 2 0 0 0.322136 116: 2 0 0 0.320629 116: 2 0 0 0.319774 116: 2 0 0 0.319659 116: 2 0 0 0.315649 116: 2 0 0 0.31561 116: 2 0 0 0.315381 116: 2 0 0 0.315319 116: 2 0 0 0.314846 116: 2 0 0 0.313883 116: 2 0 0 0.313767 116: 2 1 0.748344 1.06176 116: 2 0 0 0.306359 116: 2 0 0 0.305686 116: 2 0 0 0.30473 116: 2 0 0 0.303754 116: 2 0 0 0.302366 116: 2 0 0 0.300439 116: 2 0 0 0.29982 116: 2 0 0 0.293781 116: 2 0 0 0.292387 116: 2 0 0 0.28973 116: 2 0 0 0.289567 116: 2 1 0.743363 1.03205 116: 2 0 0 0.28835 116: 2 1 0.640272 0.928305 116: 2 1 0.75441 1.04196 116: 2 0 0 0.287193 116: 2 0 0 0.28703 116: 2 0 0 0.286042 116: 2 1 0.704609 0.986787 116: 2 0 0 0.281789 116: 2 0 0 0.281256 116: 2 0 0 0.280745 116: 2 0 0 0.276777 116: 2 0 0 0.275405 116: 2 0 0 0.273719 116: 2 0 0 0.272758 116: 2 0 0 0.272528 116: 2 0 0 0.270133 116: 2 0 0 0.268366 116: 2 1 1.07743 1.34476 116: 2 0 0 0.266908 116: 2 0 0 0.266483 116: 2 0 0 0.26547 116: 2 1 0.614911 0.878878 116: 2 0 0 0.262995 116: 2 0 0 0.262038 116: 2 0 0 0.260123 116: 2 0 0 0.259684 116: 2 0 0 0.256705 116: 2 0 0 0.253487 116: 2 0 0 0.25087 116: 2 0 0 0.249234 116: 2 0 0 0.247752 116: 2 1 0.826771 1.07418 116: 2 0 0 0.247002 116: 2 0 0 0.245384 116: 2 0 0 0.245278 116: 2 1 0.905729 1.14972 116: 2 0 0 0.238796 116: 2 0 0 0.235437 116: 2 0 0 0.234362 116: 2 0 0 0.230039 116: 2 0 0 0.229979 116: 2 0 0 0.229756 116: 2 1 0.608367 0.836999 116: 2 0 0 0.227877 116: 2 1 0.835365 1.06023 116: 2 0 0 0.224662 116: 2 1 0.914238 1.13816 116: 2 0 0 0.222902 116: 2 1 0.675557 0.895377 116: 2 0 0 0.219414 116: 2 0 0 0.216543 116: 2 0 0 0.215915 116: 2 0 0 0.214266 116: 2 0 0 0.214148 116: 2 1 0.57007 0.784133 116: 2 0 0 0.212578 116: 2 0 0 0.21163 116: 2 0 0 0.211386 116: 2 0 0 0.21126 116: 2 1 0.835367 1.04527 116: 2 0 0 0.208638 116: 2 0 0 0.2079 116: 2 0 0 0.207525 116: 2 0 0 0.205056 116: 2 0 0 0.200922 116: 2 0 0 0.200859 116/140 Test #116: Sparse_rips_complex_utility_on_tore_3D ...................................................... Passed 2.65 sec test 117 Start 117: Simplex_tree_example_from_cliques_of_graph_2 117: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_from_cliques_of_graph "/build/gudhi-3.7.1+dfsg/build/userversion/data/filtered_simplicial_complex/Klein_bottle_complex.fsc" "2" 117: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 117: Test timeout computed to be: 10000000 117: Insert the 1-skeleton in the simplex tree in 0.00026 s. 117: max_dim = 2 117: Expand the simplex tree in 1.4e-05 s. 117: Information of the Simplex Tree: 117: Number of vertices = 10 Number of simplices = 74 117: 117: 117: Iterator on vertices: 0 1 2 3 4 5 6 7 8 9 117: 117: 117: Iterator on simplices: 117: 0 117: 3 2 1 117: 6 2 1 117: 8 2 1 117: 9 2 1 117: 2 1 117: 6 3 1 117: 7 3 1 117: 8 3 1 117: 3 1 117: 5 4 1 117: 6 4 1 117: 8 4 1 117: 4 1 117: 6 5 1 117: 7 5 1 117: 8 5 1 117: 9 5 1 117: 5 1 117: 7 6 1 117: 8 6 1 117: 9 6 1 117: 6 1 117: 8 7 1 117: 7 1 117: 9 8 1 117: 8 1 117: 9 1 117: 1 117: 6 3 2 117: 8 3 2 117: 3 2 117: 8 6 2 117: 9 6 2 117: 6 2 117: 9 8 2 117: 8 2 117: 9 2 117: 2 117: 7 6 3 117: 8 6 3 117: 6 3 117: 8 7 3 117: 7 3 117: 8 3 117: 3 117: 6 5 4 117: 8 5 4 117: 5 4 117: 8 6 4 117: 6 4 117: 8 4 117: 4 117: 7 6 5 117: 8 6 5 117: 9 6 5 117: 6 5 117: 8 7 5 117: 7 5 117: 9 8 5 117: 8 5 117: 9 5 117: 5 117: 8 7 6 117: 7 6 117: 9 8 6 117: 8 6 117: 9 6 117: 6 117: 8 7 117: 7 117: 9 8 117: 8 117: 9 117: 117: 117: Iterator on Simplices in the filtration, with [filtration value]: 117: [0] 0 117: [0.01] 1 117: [0.02] 2 117: [0.03] 3 117: [0.04] 4 117: [0.05] 5 117: [0.06] 6 117: [0.07] 7 117: [0.08] 8 117: [0.09] 9 117: [1.12] 2 1 117: [1.13] 3 1 117: [1.14] 4 1 117: [1.15] 5 1 117: [1.16] 6 1 117: [1.17] 7 1 117: [1.18] 8 1 117: [1.19] 9 1 117: [1.23] 3 2 117: [1.23] 3 2 1 117: [1.26] 6 2 117: [1.26] 6 2 1 117: [1.28] 8 2 117: [1.28] 8 2 1 117: [1.29] 9 2 117: [1.29] 9 2 1 117: [1.36] 6 3 117: [1.36] 6 3 1 117: [1.36] 6 3 2 117: [1.37] 7 3 117: [1.37] 7 3 1 117: [1.38] 8 3 117: [1.38] 8 3 1 117: [1.38] 8 3 2 117: [1.45] 5 4 117: [1.45] 5 4 1 117: [1.46] 6 4 117: [1.46] 6 4 1 117: [1.48] 8 4 117: [1.48] 8 4 1 117: [1.56] 6 5 117: [1.56] 6 5 1 117: [1.56] 6 5 4 117: [1.57] 7 5 117: [1.57] 7 5 1 117: [1.58] 8 5 117: [1.58] 8 5 1 117: [1.58] 8 5 4 117: [1.59] 9 5 117: [1.59] 9 5 1 117: [1.67] 7 6 117: [1.67] 7 6 1 117: [1.67] 7 6 3 117: [1.67] 7 6 5 117: [1.68] 8 6 117: [1.68] 8 6 1 117: [1.68] 8 6 2 117: [1.68] 8 6 3 117: [1.68] 8 6 4 117: [1.68] 8 6 5 117: [1.69] 9 6 117: [1.69] 9 6 1 117: [1.69] 9 6 2 117: [1.69] 9 6 5 117: [1.78] 8 7 117: [1.78] 8 7 1 117: [1.78] 8 7 3 117: [1.78] 8 7 5 117: [1.78] 8 7 6 117: [1.89] 9 8 117: [1.89] 9 8 1 117: [1.89] 9 8 2 117: [1.89] 9 8 5 117: [1.89] 9 8 6 117: 117: 117: Iterator on Simplices in the filtration, and their boundary simplices: 117: [0] 0 117: [0.01] 1 117: [0.02] 2 117: [0.03] 3 117: [0.04] 4 117: [0.05] 5 117: [0.06] 6 117: [0.07] 7 117: [0.08] 8 117: [0.09] 9 117: [1.12] 2 1 117: [0.01] 1 117: [0.02] 2 117: [1.13] 3 1 117: [0.01] 1 117: [0.03] 3 117: [1.14] 4 1 117: [0.01] 1 117: [0.04] 4 117: [1.15] 5 1 117: [0.01] 1 117: [0.05] 5 117: [1.16] 6 1 117: [0.01] 1 117: [0.06] 6 117: [1.17] 7 1 117: [0.01] 1 117: [0.07] 7 117: [1.18] 8 1 117: [0.01] 1 117: [0.08] 8 117: [1.19] 9 1 117: [0.01] 1 117: [0.09] 9 117: [1.23] 3 2 117: [0.02] 2 117: [0.03] 3 117: [1.23] 3 2 1 117: [1.12] 2 1 117: [1.13] 3 1 117: [1.23] 3 2 117: [1.26] 6 2 117: [0.02] 2 117: [0.06] 6 117: [1.26] 6 2 1 117: [1.12] 2 1 117: [1.16] 6 1 117: [1.26] 6 2 117: [1.28] 8 2 117: [0.02] 2 117: [0.08] 8 117: [1.28] 8 2 1 117: [1.12] 2 1 117: [1.18] 8 1 117: [1.28] 8 2 117: [1.29] 9 2 117: [0.02] 2 117: [0.09] 9 117: [1.29] 9 2 1 117: [1.12] 2 1 117: [1.19] 9 1 117: [1.29] 9 2 117: [1.36] 6 3 117: [0.03] 3 117: [0.06] 6 117: [1.36] 6 3 1 117: [1.13] 3 1 117: [1.16] 6 1 117: [1.36] 6 3 117: [1.36] 6 3 2 117: [1.23] 3 2 117: [1.26] 6 2 117: [1.36] 6 3 117: [1.37] 7 3 117: [0.03] 3 117: [0.07] 7 117: [1.37] 7 3 1 117: [1.13] 3 1 117: [1.17] 7 1 117: [1.37] 7 3 117: [1.38] 8 3 117: [0.03] 3 117: [0.08] 8 117: [1.38] 8 3 1 117: [1.13] 3 1 117: [1.18] 8 1 117: [1.38] 8 3 117: [1.38] 8 3 2 117: [1.23] 3 2 117: [1.28] 8 2 117: [1.38] 8 3 117: [1.45] 5 4 117: [0.04] 4 117: [0.05] 5 117: [1.45] 5 4 1 117: [1.14] 4 1 117: [1.15] 5 1 117: [1.45] 5 4 117: [1.46] 6 4 117: [0.04] 4 117: [0.06] 6 117: [1.46] 6 4 1 117: [1.14] 4 1 117: [1.16] 6 1 117: [1.46] 6 4 117: [1.48] 8 4 117: [0.04] 4 117: [0.08] 8 117: [1.48] 8 4 1 117: [1.14] 4 1 117: [1.18] 8 1 117: [1.48] 8 4 117: [1.56] 6 5 117: [0.05] 5 117: [0.06] 6 117: [1.56] 6 5 1 117: [1.15] 5 1 117: [1.16] 6 1 117: [1.56] 6 5 117: [1.56] 6 5 4 117: [1.45] 5 4 117: [1.46] 6 4 117: [1.56] 6 5 117: [1.57] 7 5 117: [0.05] 5 117: [0.07] 7 117: [1.57] 7 5 1 117: [1.15] 5 1 117: [1.17] 7 1 117: [1.57] 7 5 117: [1.58] 8 5 117: [0.05] 5 117: [0.08] 8 117: [1.58] 8 5 1 117: [1.15] 5 1 117: [1.18] 8 1 117: [1.58] 8 5 117: [1.58] 8 5 4 117: [1.45] 5 4 117: [1.48] 8 4 117: [1.58] 8 5 117: [1.59] 9 5 117: [0.05] 5 117: [0.09] 9 117: [1.59] 9 5 1 117: [1.15] 5 1 117: [1.19] 9 1 117: [1.59] 9 5 117: [1.67] 7 6 117: [0.06] 6 117: [0.07] 7 117: [1.67] 7 6 1 117: [1.16] 6 1 117: [1.17] 7 1 117: [1.67] 7 6 117: [1.67] 7 6 3 117: [1.36] 6 3 117: [1.37] 7 3 117: [1.67] 7 6 117: [1.67] 7 6 5 117: [1.56] 6 5 117: [1.57] 7 5 117: [1.67] 7 6 117: [1.68] 8 6 117: [0.06] 6 117: [0.08] 8 117: [1.68] 8 6 1 117: [1.16] 6 1 117: [1.18] 8 1 117: [1.68] 8 6 117: [1.68] 8 6 2 117: [1.26] 6 2 117: [1.28] 8 2 117: [1.68] 8 6 117: [1.68] 8 6 3 117: [1.36] 6 3 117: [1.38] 8 3 117: [1.68] 8 6 117: [1.68] 8 6 4 117: [1.46] 6 4 117: [1.48] 8 4 117: [1.68] 8 6 117: [1.68] 8 6 5 117: [1.56] 6 5 117: [1.58] 8 5 117: [1.68] 8 6 117: [1.69] 9 6 117: [0.06] 6 117: [0.09] 9 117: [1.69] 9 6 1 117: [1.16] 6 1 117: [1.19] 9 1 117: [1.69] 9 6 117: [1.69] 9 6 2 117: [1.26] 6 2 117: [1.29] 9 2 117: [1.69] 9 6 117: [1.69] 9 6 5 117: [1.56] 6 5 117: [1.59] 9 5 117: [1.69] 9 6 117: [1.78] 8 7 117: [0.07] 7 117: [0.08] 8 117: [1.78] 8 7 1 117: [1.17] 7 1 117: [1.18] 8 1 117: [1.78] 8 7 117: [1.78] 8 7 3 117: [1.37] 7 3 117: [1.38] 8 3 117: [1.78] 8 7 117: [1.78] 8 7 5 117: [1.57] 7 5 117: [1.58] 8 5 117: [1.78] 8 7 117: [1.78] 8 7 6 117: [1.67] 7 6 117: [1.68] 8 6 117: [1.78] 8 7 117: [1.89] 9 8 117: [0.08] 8 117: [0.09] 9 117: [1.89] 9 8 1 117: [1.18] 8 1 117: [1.19] 9 1 117: [1.89] 9 8 117: [1.89] 9 8 2 117: [1.28] 8 2 117: [1.29] 9 2 117: [1.89] 9 8 117: [1.89] 9 8 5 117: [1.58] 8 5 117: [1.59] 9 5 117: [1.89] 9 8 117: [1.89] 9 8 6 117: [1.68] 8 6 117: [1.69] 9 6 117: [1.89] 9 8 117/140 Test #117: Simplex_tree_example_from_cliques_of_graph_2 ................................................ Passed 0.01 sec test 118 Start 118: Simplex_tree_example_from_cliques_of_graph_3 118: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_from_cliques_of_graph "/build/gudhi-3.7.1+dfsg/build/userversion/data/filtered_simplicial_complex/Klein_bottle_complex.fsc" "3" 118: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 118: Test timeout computed to be: 10000000 118: Insert the 1-skeleton in the simplex tree in 0.000259 s. 118: max_dim = 3 118: Expand the simplex tree in 2.5e-05 s. 118: Information of the Simplex Tree: 118: Number of vertices = 10 Number of simplices = 98 118: 118: 118: Iterator on vertices: 0 1 2 3 4 5 6 7 8 9 118: 118: 118: Iterator on simplices: 118: 0 118: 6 3 2 1 118: 8 3 2 1 118: 3 2 1 118: 8 6 2 1 118: 9 6 2 1 118: 6 2 1 118: 9 8 2 1 118: 8 2 1 118: 9 2 1 118: 2 1 118: 7 6 3 1 118: 8 6 3 1 118: 6 3 1 118: 8 7 3 1 118: 7 3 1 118: 8 3 1 118: 3 1 118: 6 5 4 1 118: 8 5 4 1 118: 5 4 1 118: 8 6 4 1 118: 6 4 1 118: 8 4 1 118: 4 1 118: 7 6 5 1 118: 8 6 5 1 118: 9 6 5 1 118: 6 5 1 118: 8 7 5 1 118: 7 5 1 118: 9 8 5 1 118: 8 5 1 118: 9 5 1 118: 5 1 118: 8 7 6 1 118: 7 6 1 118: 9 8 6 1 118: 8 6 1 118: 9 6 1 118: 6 1 118: 8 7 1 118: 7 1 118: 9 8 1 118: 8 1 118: 9 1 118: 1 118: 8 6 3 2 118: 6 3 2 118: 8 3 2 118: 3 2 118: 9 8 6 2 118: 8 6 2 118: 9 6 2 118: 6 2 118: 9 8 2 118: 8 2 118: 9 2 118: 2 118: 8 7 6 3 118: 7 6 3 118: 8 6 3 118: 6 3 118: 8 7 3 118: 7 3 118: 8 3 118: 3 118: 8 6 5 4 118: 6 5 4 118: 8 5 4 118: 5 4 118: 8 6 4 118: 6 4 118: 8 4 118: 4 118: 8 7 6 5 118: 7 6 5 118: 9 8 6 5 118: 8 6 5 118: 9 6 5 118: 6 5 118: 8 7 5 118: 7 5 118: 9 8 5 118: 8 5 118: 9 5 118: 5 118: 8 7 6 118: 7 6 118: 9 8 6 118: 8 6 118: 9 6 118: 6 118: 8 7 118: 7 118: 9 8 118: 8 118: 9 118: 118: 118: Iterator on Simplices in the filtration, with [filtration value]: 118: [0] 0 118: [0.01] 1 118: [0.02] 2 118: [0.03] 3 118: [0.04] 4 118: [0.05] 5 118: [0.06] 6 118: [0.07] 7 118: [0.08] 8 118: [0.09] 9 118: [1.12] 2 1 118: [1.13] 3 1 118: [1.14] 4 1 118: [1.15] 5 1 118: [1.16] 6 1 118: [1.17] 7 1 118: [1.18] 8 1 118: [1.19] 9 1 118: [1.23] 3 2 118: [1.23] 3 2 1 118: [1.26] 6 2 118: [1.26] 6 2 1 118: [1.28] 8 2 118: [1.28] 8 2 1 118: [1.29] 9 2 118: [1.29] 9 2 1 118: [1.36] 6 3 118: [1.36] 6 3 1 118: [1.36] 6 3 2 118: [1.36] 6 3 2 1 118: [1.37] 7 3 118: [1.37] 7 3 1 118: [1.38] 8 3 118: [1.38] 8 3 1 118: [1.38] 8 3 2 118: [1.38] 8 3 2 1 118: [1.45] 5 4 118: [1.45] 5 4 1 118: [1.46] 6 4 118: [1.46] 6 4 1 118: [1.48] 8 4 118: [1.48] 8 4 1 118: [1.56] 6 5 118: [1.56] 6 5 1 118: [1.56] 6 5 4 118: [1.56] 6 5 4 1 118: [1.57] 7 5 118: [1.57] 7 5 1 118: [1.58] 8 5 118: [1.58] 8 5 1 118: [1.58] 8 5 4 118: [1.58] 8 5 4 1 118: [1.59] 9 5 118: [1.59] 9 5 1 118: [1.67] 7 6 118: [1.67] 7 6 1 118: [1.67] 7 6 3 118: [1.67] 7 6 3 1 118: [1.67] 7 6 5 118: [1.67] 7 6 5 1 118: [1.68] 8 6 118: [1.68] 8 6 1 118: [1.68] 8 6 2 118: [1.68] 8 6 2 1 118: [1.68] 8 6 3 118: [1.68] 8 6 3 1 118: [1.68] 8 6 3 2 118: [1.68] 8 6 4 118: [1.68] 8 6 4 1 118: [1.68] 8 6 5 118: [1.68] 8 6 5 1 118: [1.68] 8 6 5 4 118: [1.69] 9 6 118: [1.69] 9 6 1 118: [1.69] 9 6 2 118: [1.69] 9 6 2 1 118: [1.69] 9 6 5 118: [1.69] 9 6 5 1 118: [1.78] 8 7 118: [1.78] 8 7 1 118: [1.78] 8 7 3 118: [1.78] 8 7 3 1 118: [1.78] 8 7 5 118: [1.78] 8 7 5 1 118: [1.78] 8 7 6 118: [1.78] 8 7 6 1 118: [1.78] 8 7 6 3 118: [1.78] 8 7 6 5 118: [1.89] 9 8 118: [1.89] 9 8 1 118: [1.89] 9 8 2 118: [1.89] 9 8 2 1 118: [1.89] 9 8 5 118: [1.89] 9 8 5 1 118: [1.89] 9 8 6 118: [1.89] 9 8 6 1 118: [1.89] 9 8 6 2 118: [1.89] 9 8 6 5 118: 118: 118: Iterator on Simplices in the filtration, and their boundary simplices: 118: [0] 0 118: [0.01] 1 118: [0.02] 2 118: [0.03] 3 118: [0.04] 4 118: [0.05] 5 118: [0.06] 6 118: [0.07] 7 118: [0.08] 8 118: [0.09] 9 118: [1.12] 2 1 118: [0.01] 1 118: [0.02] 2 118: [1.13] 3 1 118: [0.01] 1 118: [0.03] 3 118: [1.14] 4 1 118: [0.01] 1 118: [0.04] 4 118: [1.15] 5 1 118: [0.01] 1 118: [0.05] 5 118: [1.16] 6 1 118: [0.01] 1 118: [0.06] 6 118: [1.17] 7 1 118: [0.01] 1 118: [0.07] 7 118: [1.18] 8 1 118: [0.01] 1 118: [0.08] 8 118: [1.19] 9 1 118: [0.01] 1 118: [0.09] 9 118: [1.23] 3 2 118: [0.02] 2 118: [0.03] 3 118: [1.23] 3 2 1 118: [1.12] 2 1 118: [1.13] 3 1 118: [1.23] 3 2 118: [1.26] 6 2 118: [0.02] 2 118: [0.06] 6 118: [1.26] 6 2 1 118: [1.12] 2 1 118: [1.16] 6 1 118: [1.26] 6 2 118: [1.28] 8 2 118: [0.02] 2 118: [0.08] 8 118: [1.28] 8 2 1 118: [1.12] 2 1 118: [1.18] 8 1 118: [1.28] 8 2 118: [1.29] 9 2 118: [0.02] 2 118: [0.09] 9 118: [1.29] 9 2 1 118: [1.12] 2 1 118: [1.19] 9 1 118: [1.29] 9 2 118: [1.36] 6 3 118: [0.03] 3 118: [0.06] 6 118: [1.36] 6 3 1 118: [1.13] 3 1 118: [1.16] 6 1 118: [1.36] 6 3 118: [1.36] 6 3 2 118: [1.23] 3 2 118: [1.26] 6 2 118: [1.36] 6 3 118: [1.36] 6 3 2 1 118: [1.23] 3 2 1 118: [1.26] 6 2 1 118: [1.36] 6 3 1 118: [1.36] 6 3 2 118: [1.37] 7 3 118: [0.03] 3 118: [0.07] 7 118: [1.37] 7 3 1 118: [1.13] 3 1 118: [1.17] 7 1 118: [1.37] 7 3 118: [1.38] 8 3 118: [0.03] 3 118: [0.08] 8 118: [1.38] 8 3 1 118: [1.13] 3 1 118: [1.18] 8 1 118: [1.38] 8 3 118: [1.38] 8 3 2 118: [1.23] 3 2 118: [1.28] 8 2 118: [1.38] 8 3 118: [1.38] 8 3 2 1 118: [1.23] 3 2 1 118: [1.28] 8 2 1 118: [1.38] 8 3 1 118: [1.38] 8 3 2 118: [1.45] 5 4 118: [0.04] 4 118: [0.05] 5 118: [1.45] 5 4 1 118: [1.14] 4 1 118: [1.15] 5 1 118: [1.45] 5 4 118: [1.46] 6 4 118: [0.04] 4 118: [0.06] 6 118: [1.46] 6 4 1 118: [1.14] 4 1 118: [1.16] 6 1 118: [1.46] 6 4 118: [1.48] 8 4 118: [0.04] 4 118: [0.08] 8 118: [1.48] 8 4 1 118: [1.14] 4 1 118: [1.18] 8 1 118: [1.48] 8 4 118: [1.56] 6 5 118: [0.05] 5 118: [0.06] 6 118: [1.56] 6 5 1 118: [1.15] 5 1 118: [1.16] 6 1 118: [1.56] 6 5 118: [1.56] 6 5 4 118: [1.45] 5 4 118: [1.46] 6 4 118: [1.56] 6 5 118: [1.56] 6 5 4 1 118: [1.45] 5 4 1 118: [1.46] 6 4 1 118: [1.56] 6 5 1 118: [1.56] 6 5 4 118: [1.57] 7 5 118: [0.05] 5 118: [0.07] 7 118: [1.57] 7 5 1 118: [1.15] 5 1 118: [1.17] 7 1 118: [1.57] 7 5 118: [1.58] 8 5 118: [0.05] 5 118: [0.08] 8 118: [1.58] 8 5 1 118: [1.15] 5 1 118: [1.18] 8 1 118: [1.58] 8 5 118: [1.58] 8 5 4 118: [1.45] 5 4 118: [1.48] 8 4 118: [1.58] 8 5 118: [1.58] 8 5 4 1 118: [1.45] 5 4 1 118: [1.48] 8 4 1 118: [1.58] 8 5 1 118: [1.58] 8 5 4 118: [1.59] 9 5 118: [0.05] 5 118: [0.09] 9 118: [1.59] 9 5 1 118: [1.15] 5 1 118: [1.19] 9 1 118: [1.59] 9 5 118: [1.67] 7 6 118: [0.06] 6 118: [0.07] 7 118: [1.67] 7 6 1 118: [1.16] 6 1 118: [1.17] 7 1 118: [1.67] 7 6 118: [1.67] 7 6 3 118: [1.36] 6 3 118: [1.37] 7 3 118: [1.67] 7 6 118: [1.67] 7 6 3 1 118: [1.36] 6 3 1 118: [1.37] 7 3 1 118: [1.67] 7 6 1 118: [1.67] 7 6 3 118: [1.67] 7 6 5 118: [1.56] 6 5 118: [1.57] 7 5 118: [1.67] 7 6 118: [1.67] 7 6 5 1 118: [1.56] 6 5 1 118: [1.57] 7 5 1 118: [1.67] 7 6 1 118: [1.67] 7 6 5 118: [1.68] 8 6 118: [0.06] 6 118: [0.08] 8 118: [1.68] 8 6 1 118: [1.16] 6 1 118: [1.18] 8 1 118: [1.68] 8 6 118: [1.68] 8 6 2 118: [1.26] 6 2 118: [1.28] 8 2 118: [1.68] 8 6 118: [1.68] 8 6 2 1 118: [1.26] 6 2 1 118: [1.28] 8 2 1 118: [1.68] 8 6 1 118: [1.68] 8 6 2 118: [1.68] 8 6 3 118: [1.36] 6 3 118: [1.38] 8 3 118: [1.68] 8 6 118: [1.68] 8 6 3 1 118: [1.36] 6 3 1 118: [1.38] 8 3 1 118: [1.68] 8 6 1 118: [1.68] 8 6 3 118: [1.68] 8 6 3 2 118: [1.36] 6 3 2 118: [1.38] 8 3 2 118: [1.68] 8 6 2 118: [1.68] 8 6 3 118: [1.68] 8 6 4 118: [1.46] 6 4 118: [1.48] 8 4 118: [1.68] 8 6 118: [1.68] 8 6 4 1 118: [1.46] 6 4 1 118: [1.48] 8 4 1 118: [1.68] 8 6 1 118: [1.68] 8 6 4 118: [1.68] 8 6 5 118: [1.56] 6 5 118: [1.58] 8 5 118: [1.68] 8 6 118: [1.68] 8 6 5 1 118: [1.56] 6 5 1 118: [1.58] 8 5 1 118: [1.68] 8 6 1 118: [1.68] 8 6 5 118: [1.68] 8 6 5 4 118: [1.56] 6 5 4 118: [1.58] 8 5 4 118: [1.68] 8 6 4 118: [1.68] 8 6 5 118: [1.69] 9 6 118: [0.06] 6 118: [0.09] 9 118: [1.69] 9 6 1 118: [1.16] 6 1 118: [1.19] 9 1 118: [1.69] 9 6 118: [1.69] 9 6 2 118: [1.26] 6 2 118: [1.29] 9 2 118: [1.69] 9 6 118: [1.69] 9 6 2 1 118: [1.26] 6 2 1 118: [1.29] 9 2 1 118: [1.69] 9 6 1 118: [1.69] 9 6 2 118: [1.69] 9 6 5 118: [1.56] 6 5 118: [1.59] 9 5 118: [1.69] 9 6 118: [1.69] 9 6 5 1 118: [1.56] 6 5 1 118: [1.59] 9 5 1 118: [1.69] 9 6 1 118: [1.69] 9 6 5 118: [1.78] 8 7 118: [0.07] 7 118: [0.08] 8 118: [1.78] 8 7 1 118: [1.17] 7 1 118: [1.18] 8 1 118: [1.78] 8 7 118: [1.78] 8 7 3 118: [1.37] 7 3 118: [1.38] 8 3 118: [1.78] 8 7 118: [1.78] 8 7 3 1 118: [1.37] 7 3 1 118: [1.38] 8 3 1 118: [1.78] 8 7 1 118: [1.78] 8 7 3 118: [1.78] 8 7 5 118: [1.57] 7 5 118: [1.58] 8 5 118: [1.78] 8 7 118: [1.78] 8 7 5 1 118: [1.57] 7 5 1 118: [1.58] 8 5 1 118: [1.78] 8 7 1 118: [1.78] 8 7 5 118: [1.78] 8 7 6 118: [1.67] 7 6 118: [1.68] 8 6 118: [1.78] 8 7 118: [1.78] 8 7 6 1 118: [1.67] 7 6 1 118: [1.68] 8 6 1 118: [1.78] 8 7 1 118: [1.78] 8 7 6 118: [1.78] 8 7 6 3 118: [1.67] 7 6 3 118: [1.68] 8 6 3 118: [1.78] 8 7 3 118: [1.78] 8 7 6 118: [1.78] 8 7 6 5 118: [1.67] 7 6 5 118: [1.68] 8 6 5 118: [1.78] 8 7 5 118: [1.78] 8 7 6 118: [1.89] 9 8 118: [0.08] 8 118: [0.09] 9 118: [1.89] 9 8 1 118: [1.18] 8 1 118: [1.19] 9 1 118: [1.89] 9 8 118: [1.89] 9 8 2 118: [1.28] 8 2 118: [1.29] 9 2 118: [1.89] 9 8 118: [1.89] 9 8 2 1 118: [1.28] 8 2 1 118: [1.29] 9 2 1 118: [1.89] 9 8 1 118: [1.89] 9 8 2 118: [1.89] 9 8 5 118: [1.58] 8 5 118: [1.59] 9 5 118: [1.89] 9 8 118: [1.89] 9 8 5 1 118: [1.58] 8 5 1 118: [1.59] 9 5 1 118: [1.89] 9 8 1 118: [1.89] 9 8 5 118: [1.89] 9 8 6 118: [1.68] 8 6 118: [1.69] 9 6 118: [1.89] 9 8 118: [1.89] 9 8 6 1 118: [1.68] 8 6 1 118: [1.69] 9 6 1 118: [1.89] 9 8 1 118: [1.89] 9 8 6 118: [1.89] 9 8 6 2 118: [1.68] 8 6 2 118: [1.69] 9 6 2 118: [1.89] 9 8 2 118: [1.89] 9 8 6 118: [1.89] 9 8 6 5 118: [1.68] 8 6 5 118: [1.69] 9 6 5 118: [1.89] 9 8 5 118: [1.89] 9 8 6 118/140 Test #118: Simplex_tree_example_from_cliques_of_graph_3 ................................................ Passed 0.03 sec test 119 Start 119: Simplex_tree_example_simple_simplex_tree 119: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_simple_simplex_tree 119: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 119: Test timeout computed to be: 10000000 119: ******************************************************************** 119: EXAMPLE OF SIMPLE INSERTION 119: * INSERT 0 119: + 0 INSERTED 119: * INSERT 1 119: + 1 INSERTED 119: * INSERT (0,1) 119: + (0,1) INSERTED 119: * INSERT 2 119: + 2 INSERTED 119: * INSERT (2,0) 119: + (2,0) INSERTED 119: * INSERT (2,1) 119: + (2,1) INSERTED 119: * INSERT (2,1,0) 119: + (2,1,0) INSERTED 119: * INSERT 3 119: + 3 INSERTED 119: * INSERT (3,0) 119: + (3,0) INSERTED 119: * INSERT 0 (already inserted) 119: - 0 NOT INSERTED 119: * INSERT (2,1,0) (already inserted) 119: - (2,1,0) NOT INSERTED 119: ******************************************************************** 119: * The complex contains 9 simplices 119: - dimension 2 119: * Iterator on Simplices in the filtration, with [filtration value]: 119: [0.1] (0) 119: [0.1] (1) 119: [0.1] (2) 119: [0.1] (3) 119: [0.2] (1)(0) 119: [0.2] (2)(0) 119: [0.2] (2)(1) 119: [0.2] (3)(0) 119: [0.3] (2)(1)(0) 119: **************IS THE SIMPLEX {1} IN THE SIMPLEX TREE ? 119: ***+ YES IT IS! 119: **************IS THE SIMPLEX {15} IN THE SIMPLEX TREE ? 119: ***- NO IT ISN'T 119: **************IS THE SIMPLEX {2,0} IN THE SIMPLEX TREE ? 119: ***+ YES IT IS! 119: **************IS THE SIMPLEX {15,1} IN THE SIMPLEX TREE ? 119: ***- NO IT ISN'T 119: **************IS THE SIMPLEX {1,2,0} IN THE SIMPLEX TREE ? 119: ***+ YES IT IS! 119: **************IS THE SIMPLEX {0,1} IN THE SIMPLEX TREE ? 119: ***+ YES IT IS! 119: **************COFACES OF {0,1} IN CODIMENSION 1 ARE 119: (2)(1)(0) 119: **************STARS OF {0,1} ARE 119: (1)(0) 119: (2)(1)(0) 119: **************BOUNDARIES OF {0,1,2} ARE 119: (1)(0) 119: (2)(0) 119: (2)(1) 119/140 Test #119: Simplex_tree_example_simple_simplex_tree .................................................... Passed 0.01 sec test 120 Start 120: Simplex_tree_example_mini_simplex_tree 120: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_mini_simplex_tree 120: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 120: Test timeout computed to be: 10000000 120: 210 120/140 Test #120: Simplex_tree_example_mini_simplex_tree ...................................................... Passed 0.01 sec test 121 Start 121: Simplex_tree_example_alpha_shapes_3_from_off 121: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_alpha_shapes_3_from_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" 121: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 121: Test timeout computed to be: 10000000 121: 0 0 0 121: 0 1 0 121: 0 2 0 121: 0 3 0 121: 0 4 0 121: 0 5 0 121: 0 6 0 121: 0 7 0 121: 0 8 0 121: 0 9 0 121: 0 10 0 121: 0 11 0 121: 0 12 0 121: 0 13 0 121: 0 14 0 121: 0 15 0 121: 0 16 0 121: 0 17 0 121: 0 18 0 121: 0 19 0 121: 0 20 0 121: 0 21 0 121: 0 22 0 121: 0 23 0 121: 0 24 0 121: 0 25 0 121: 0 26 0 121: 0 27 0 121: 0 28 0 121: 0 29 0 121: 0 30 0 121: 0 31 0 121: 0 32 0 121: 0 33 0 121: 0 34 0 121: 0 35 0 121: 0 36 0 121: 0 37 0 121: 0 38 0 121: 0 39 0 121: 0 40 0 121: 0 41 0 121: 0 42 0 121: 0 43 0 121: 0 44 0 121: 0 45 0 121: 0 46 0 121: 0 47 0 121: 0 48 0 121: 0 49 0 121: 0 50 0 121: 0 51 0 121: 0 52 0 121: 0 53 0 121: 0 54 0 121: 0 55 0 121: 0 56 0 121: 0 57 0 121: 0 58 0 121: 0 59 0 121: 0 60 0 121: 0 61 0 121: 0 62 0 121: 0 63 0 121: 0 64 0 121: 0 65 0 121: 0 66 0 121: 0 67 0 121: 0 68 0 121: 0 69 0 121: 0 70 0 121: 0 71 0 121: 0 72 0 121: 0 73 0 121: 0 74 0 121: 0 75 0 121: 0 76 0 121: 0 77 0 121: 0 78 0 121: 0 79 0 121: 0 80 0 121: 0 81 0 121: 0 82 0 121: 0 83 0 121: 0 84 0 121: 0 85 0 121: 0 86 0 121: 0 87 0 121: 0 88 0 121: 0 89 0 121: 0 90 0 121: 0 91 0 121: 0 92 0 121: 0 93 0 121: 0 94 0 121: 0 95 0 121: 0 96 0 121: 0 97 0 121: 0 98 0 121: 0 99 0 121: 0 100 0 121: 0 101 0 121: 0 102 0 121: 0 103 0 121: 0 104 0 121: 0 105 0 121: 0 106 0 121: 0 107 0 121: 0 108 0 121: 0 109 0 121: 0 110 0 121: 0 111 0 121: 0 112 0 121: 0 113 0 121: 0 114 0 121: 0 115 0 121: 0 116 0 121: 0 117 0 121: 0 118 0 121: 0 119 0 121: 0 120 0 121: 0 121 0 121: 0 122 0 121: 0 123 0 121: 0 124 0 121: 0 125 0 121: 0 126 0 121: 0 127 0 121: 0 128 0 121: 0 129 0 121: 0 130 0 121: 0 131 0 121: 0 132 0 121: 0 133 0 121: 0 134 0 121: 0 135 0 121: 0 136 0 121: 0 137 0 121: 0 138 0 121: 0 139 0 121: 0 140 0 121: 0 141 0 121: 0 142 0 121: 0 143 0 121: 0 144 0 121: 0 145 0 121: 0 146 0 121: 0 147 0 121: 0 148 0 121: 0 149 0 121: 0 150 0 121: 0 151 0 121: 0 152 0 121: 0 153 0 121: 0 154 0 121: 0 155 0 121: 0 156 0 121: 0 157 0 121: 0 158 0 121: 0 159 0 121: 0 160 0 121: 0 161 0 121: 0 162 0 121: 0 163 0 121: 0 164 0 121: 0 165 0 121: 0 166 0 121: 0 167 0 121: 0 168 0 121: 0 169 0 121: 0 170 0 121: 0 171 0 121: 0 172 0 121: 0 173 0 121: 0 174 0 121: 0 175 0 121: 0 176 0 121: 0 177 0 121: 0 178 0 121: 0 179 0 121: 0 180 0 121: 0 181 0 121: 0 182 0 121: 0 183 0 121: 0 184 0 121: 0 185 0 121: 0 186 0 121: 0 187 0 121: 0 188 0 121: 0 189 0 121: 0 190 0 121: 0 191 0 121: 0 192 0 121: 0 193 0 121: 0 194 0 121: 0 195 0 121: 0 196 0 121: 0 197 0 121: 0 198 0 121: 0 199 0 121: 0 200 0 121: 0 201 0 121: 0 202 0 121: 0 203 0 121: 0 204 0 121: 0 205 0 121: 0 206 0 121: 0 207 0 121: 0 208 0 121: 0 209 0 121: 0 210 0 121: 0 211 0 121: 0 212 0 121: 0 213 0 121: 0 214 0 121: 0 215 0 121: 0 216 0 121: 0 217 0 121: 0 218 0 121: 0 219 0 121: 0 220 0 121: 0 221 0 121: 0 222 0 121: 0 223 0 121: 0 224 0 121: 0 225 0 121: 0 226 0 121: 0 227 0 121: 0 228 0 121: 0 229 0 121: 0 230 0 121: 0 231 0 121: 0 232 0 121: 0 233 0 121: 0 234 0 121: 0 235 0 121: 0 236 0 121: 0 237 0 121: 0 238 0 121: 0 239 0 121: 0 240 0 121: 0 241 0 121: 0 242 0 121: 0 243 0 121: 0 244 0 121: 0 245 0 121: 0 246 0 121: 0 247 0 121: 0 248 0 121: 0 249 0 121: 0 250 0 121: 0 251 0 121: 0 252 0 121: 0 253 0 121: 0 254 0 121: 0 255 0 121: 0 256 0 121: 0 257 0 121: 0 258 0 121: 0 259 0 121: 0 260 0 121: 0 261 0 121: 0 262 0 121: 0 263 0 121: 0 264 0 121: 0 265 0 121: 0 266 0 121: 0 267 0 121: 0 268 0 121: 0 269 0 121: 0 270 0 121: 0 271 0 121: 0 272 0 121: 0 273 0 121: 0 274 0 121: 0 275 0 121: 0 276 0 121: 0 277 0 121: 0 278 0 121: 0 279 0 121: 0 280 0 121: 0 281 0 121: 0 282 0 121: 0 283 0 121: 0 284 0 121: 0 285 0 121: 0 286 0 121: 0 287 0 121: 0 288 0 121: 0 289 0 121: 0 290 0 121: 0 291 0 121: 0 292 0 121: 0 293 0 121: 0 294 0 121: 0 295 0 121: 0 296 0 121: 0 297 0 121: 0 298 0 121: 0 299 0 121: 0 300 0 121: 0 301 0 121: 0 302 0 121: 0 303 0 121: 0 304 0 121: 0 305 0 121: 0 306 0 121: 0 307 0 121: 0 308 0 121: 0 309 0 121: 0 310 0 121: 0 311 0 121: 0 312 0 121: 0 313 0 121: 0 314 0 121: 0 315 0 121: 0 316 0 121: 0 317 0 121: 0 318 0 121: 0 319 0 121: 0 320 0 121: 0 321 0 121: 0 322 0 121: 0 323 0 121: 0 324 0 121: 0 325 0 121: 0 326 0 121: 0 327 0 121: 0 328 0 121: 0 329 0 121: 0 330 0 121: 0 331 0 121: 0 332 0 121: 0 333 0 121: 0 334 0 121: 0 335 0 121: 0 336 0 121: 0 337 0 121: 0 338 0 121: 0 339 0 121: 0 340 0 121: 0 341 0 121: 0 342 0 121: 0 343 0 121: 0 344 0 121: 0 345 0 121: 0 346 0 121: 0 347 0 121: 0 348 0 121: 0 349 0 121: 0 350 0 121: 0 351 0 121: 0 352 0 121: 0 353 0 121: 0 354 0 121: 0 355 0 121: 0 356 0 121: 0 357 0 121: 0 358 0 121: 0 359 0 121: 0 360 0 121: 0 361 0 121: 0 362 0 121: 0 363 0 121: 0 364 0 121: 0 365 0 121: 0 366 0 121: 0 367 0 121: 0 368 0 121: 0 369 0 121: 0 370 0 121: 0 371 0 121: 0 372 0 121: 0 373 0 121: 0 374 0 121: 0 375 0 121: 0 376 0 121: 0 377 0 121: 0 378 0 121: 0 379 0 121: 0 380 0 121: 0 381 0 121: 0 382 0 121: 0 383 0 121: 0 384 0 121: 0 385 0 121: 0 386 0 121: 0 387 0 121: 0 388 0 121: 0 389 0 121: 0 390 0 121: 0 391 0 121: 0 392 0 121: 0 393 0 121: 0 394 0 121: 0 395 0 121: 0 396 0 121: 0 397 0 121: 0 398 0 121: 0 399 0 121: 0 400 0 121: 0 401 0 121: 0 402 0 121: 0 403 0 121: 0 404 0 121: 0 405 0 121: 0 406 0 121: 0 407 0 121: 0 408 0 121: 0 409 0 121: 0 410 0 121: 0 411 0 121: 0 412 0 121: 0 413 0 121: 0 414 0 121: 0 415 0 121: 0 416 0 121: 0 417 0 121: 0 418 0 121: 0 419 0 121: 0 420 0 121: 0 421 0 121: 0 422 0 121: 0 423 0 121: 0 424 0 121: 0 425 0 121: 0 426 0 121: 0 427 0 121: 0 428 0 121: 0 429 0 121: 0 430 0 121: 0 431 0 121: 0 432 0 121: 0 433 0 121: 0 434 0 121: 0 435 0 121: 0 436 0 121: 0 437 0 121: 0 438 0 121: 0 439 0 121: 0 440 0 121: 0 441 0 121: 0 442 0 121: 0 443 0 121: 0 444 0 121: 0 445 0 121: 0 446 0 121: 0 447 0 121: 0 448 0 121: 0 449 0 121: 0 450 0 121: 0 451 0 121: 0 452 0 121: 0 453 0 121: 0 454 0 121: 0 455 0 121: 0 456 0 121: 0 457 0 121: 0 458 0 121: 0 459 0 121: 0 460 0 121: 0 461 0 121: 0 462 0 121: 0 463 0 121: 0 464 0 121: 0 465 0 121: 0 466 0 121: 0 467 0 121: 0 468 0 121: 0 469 0 121: 0 470 0 121: 0 471 0 121: 0 472 0 121: 0 473 0 121: 0 474 0 121: 0 475 0 121: 0 476 0 121: 0 477 0 121: 0 478 0 121: 0 479 0 121: 0 480 0 121: 0 481 0 121: 0 482 0 121: 0 483 0 121: 0 484 0 121: 0 485 0 121: 0 486 0 121: 0 487 0 121: 0 488 0 121: 0 489 0 121: 0 490 0 121: 0 491 0 121: 0 492 0 121: 0 493 0 121: 0 494 0 121: 0 495 0 121: 0 496 0 121: 0 497 0 121: 0 498 0 121: 0 499 0 121: 0 500 0 121: 0 501 0 121: 0 502 0 121: 0 503 0 121: 0 504 0 121: 0 505 0 121: 0 506 0 121: 0 507 0 121: 0 508 0 121: 0 509 0 121: 0 510 0 121: 0 511 0 121: 0 512 0 121: 0 513 0 121: 0 514 0 121: 0 515 0 121: 0 516 0 121: 0 517 0 121: 0 518 0 121: 0 519 0 121: 0 520 0 121: 0 521 0 121: 0 522 0 121: 0 523 0 121: 0 524 0 121: 0 525 0 121: 0 526 0 121: 0 527 0 121: 0 528 0 121: 0 529 0 121: 0 530 0 121: 0 531 0 121: 0 532 0 121: 0 533 0 121: 0 534 0 121: 0 535 0 121: 0 536 0 121: 0 537 0 121: 0 538 0 121: 0 539 0 121: 0 540 0 121: 0 541 0 121: 0 542 0 121: 0 543 0 121: 0 544 0 121: 0 545 0 121: 0 546 0 121: 0 547 0 121: 0 548 0 121: 0 549 0 121: 0 550 0 121: 0 551 0 121: 0 552 0 121: 0 553 0 121: 0 554 0 121: 0 555 0 121: 0 556 0 121: 0 557 0 121: 0 558 0 121: 0 559 0 121: 0 560 0 121: 0 561 0 121: 0 562 0 121: 0 563 0 121: 0 564 0 121: 0 565 0 121: 0 566 0 121: 0 567 0 121: 0 568 0 121: 0 569 0 121: 0 570 0 121: 0 571 0 121: 0 572 0 121: 0 573 0 121: 0 574 0 121: 0 575 0 121: 0 576 0 121: 0 577 0 121: 0 578 0 121: 0 579 0 121: 0 580 0 121: 0 581 0 121: 0 582 0 121: 0 583 0 121: 0 584 0 121: 0 585 0 121: 0 586 0 121: 0 587 0 121: 0 588 0 121: 0 589 0 121: 0 590 0 121: 0 591 0 121: 0 592 0 121: 0 593 0 121: 0 594 0 121: 0 595 0 121: 0 596 0 121: 0 597 0 121: 0 598 0 121: 0 599 0 121: 0 600 0 121: 0 601 0 121: 0 602 0 121: 0 603 0 121: 0 604 0 121: 0 605 0 121: 0 606 0 121: 0 607 0 121: 0 608 0 121: 0 609 0 121: 0 610 0 121: 0 611 0 121: 0 612 0 121: 0 613 0 121: 0 614 0 121: 0 615 0 121: 0 616 0 121: 0 617 0 121: 0 618 0 121: 0 619 0 121: 0 620 0 121: 0 621 0 121: 0 622 0 121: 0 623 0 121: 0 624 0 121: 0 625 0 121: 0 626 0 121: 0 627 0 121: 0 628 0 121: 0 629 0 121: 0 630 0 121: 0 631 0 121: 0 632 0 121: 0 633 0 121: 0 634 0 121: 0 635 0 121: 0 636 0 121: 0 637 0 121: 0 638 0 121: 0 639 0 121: 0 640 0 121: 0 641 0 121: 0 642 0 121: 0 643 0 121: 0 644 0 121: 0 645 0 121: 0 646 0 121: 0 647 0 121: 0 648 0 121: 0 649 0 121: 0 650 0 121: 0 651 0 121: 0 652 0 121: 0 653 0 121: 0 654 0 121: 0 655 0 121: 0 656 0 121: 0 657 0 121: 0 658 0 121: 0 659 0 121: 0 660 0 121: 0 661 0 121: 0 662 0 121: 0 663 0 121: 0 664 0 121: 0 665 0 121: 0 666 0 121: 0 667 0 121: 0 668 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545 538 24.8027 121: 1 623 616 24.8579 121: 2 623 617 616 24.8579 121: 2 623 618 616 24.8579 121: 3 623 618 617 616 24.8579 121: 1 1306 1301 24.9614 121: 2 1306 1301 1300 24.9614 121: 2 1306 1302 1301 24.9614 121: 3 1306 1302 1301 1300 24.9614 121: 2 848 828 764 25.0843 121: 3 848 847 828 764 25.0843 121: 1 533 498 25.1653 121: 2 533 498 495 25.1653 121: 2 533 522 498 25.1653 121: 3 533 522 498 495 25.1653 121: 1 538 393 25.3099 121: 2 538 393 378 25.3099 121: 2 538 495 393 25.3099 121: 3 538 495 393 378 25.3099 121: 1 218 161 25.5667 121: 2 704 218 161 25.5667 121: 2 1304 218 161 25.5667 121: 3 1304 704 218 161 25.5667 121: 1 1087 1084 25.6267 121: 2 1087 1084 143 25.6267 121: 2 1089 1087 1084 25.6267 121: 3 1089 1087 1084 143 25.6267 121: 1 1076 1069 26.5405 121: 2 1076 1069 131 26.5405 121: 2 1094 1076 1069 26.5405 121: 3 1094 1076 1069 131 26.5405 121: 1 764 161 26.6953 121: 2 764 762 161 26.6953 121: 2 828 764 161 26.6953 121: 3 828 764 762 161 26.6953 121: 1 713 702 27.1233 121: 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1111 395 354 44 30.5164 121: 1 352 44 30.9166 121: 2 354 352 44 30.9166 121: 2 1111 352 44 30.9166 121: 3 1111 354 352 44 30.9166 121: 1 395 352 31.9609 121: 2 395 352 44 31.9609 121: 2 1111 395 352 31.9609 121: 3 1111 395 352 44 31.9609 121: 1 939 889 32.2936 121: 2 939 890 889 32.2936 121: 2 939 938 889 32.2936 121: 3 939 938 890 889 32.2936 121: 2 538 533 498 32.3664 121: 3 538 533 498 495 32.3664 121: 2 1090 1076 131 32.6232 121: 3 1091 1090 1076 131 32.6232 121: 1 947 924 33.084 121: 2 947 930 924 33.084 121: 2 947 932 924 33.084 121: 3 947 932 930 924 33.084 121: 1 538 395 33.1537 121: 2 538 395 378 33.1537 121: 2 950 538 395 33.1537 121: 3 950 538 395 378 33.1537 121: 1 85 78 33.2456 121: 2 633 85 78 33.2456 121: 2 634 85 78 33.2456 121: 3 634 633 85 78 33.2456 121: 1 1283 19 33.5704 121: 2 1283 1185 19 33.5704 121: 2 1283 1282 19 33.5704 121: 3 1283 1282 1185 19 33.5704 121: 1 1111 1069 33.6333 121: 2 1111 1076 1069 33.6333 121: 2 1111 1094 1069 33.6333 121: 3 1111 1094 1076 1069 33.6333 121: 1 1116 356 33.7177 121: 2 1116 356 350 33.7177 121: 2 1116 357 356 33.7177 121: 3 1116 357 356 350 33.7177 121: 1 634 218 34.7377 121: 2 634 218 175 34.7377 121: 2 704 634 218 34.7377 121: 3 704 634 218 175 34.7377 121: 1 296 273 35.0007 121: 2 296 294 273 35.0007 121: 2 296 295 273 35.0007 121: 3 296 295 294 273 35.0007 121: 1 1069 950 35.3208 121: 2 1076 1069 950 35.3208 121: 2 1111 1069 950 35.3208 121: 3 1111 1076 1069 950 35.3208 121: 1 1118 357 35.9213 121: 2 1118 357 351 35.9213 121: 2 1118 1116 357 35.9213 121: 3 1118 1116 357 351 35.9213 121: 1 395 393 36.0811 121: 2 395 393 378 36.0811 121: 2 538 395 393 36.0811 121: 3 538 395 393 378 36.0811 121: 1 1077 962 36.4278 121: 2 1077 962 134 36.4278 121: 2 1081 1077 962 36.4278 121: 3 1081 1077 962 134 36.4278 121: 1 970 949 36.6862 121: 2 970 949 13 36.6862 121: 2 970 949 121 36.6862 121: 3 970 949 121 13 36.6862 121: 1 1290 1244 37.1432 121: 2 1290 1269 1244 37.1432 121: 2 1304 1290 1244 37.1432 121: 3 1304 1290 1269 1244 37.1432 121: 1 1290 218 38.5601 121: 2 1290 218 161 38.5601 121: 2 1304 1290 218 38.5601 121: 3 1304 1290 218 161 38.5601 121: 2 1290 1244 218 39.2158 121: 3 1304 1290 1244 218 39.2158 121: 1 764 218 41.5851 121: 2 764 218 161 41.5851 121: 2 764 704 218 41.5851 121: 3 764 704 218 161 41.5851 121: 1 857 856 41.9606 121: 2 857 856 852 41.9606 121: 2 857 856 855 41.9606 121: 3 857 856 855 852 41.9606 121: 1 390 377 42.2809 121: 2 391 390 377 42.2809 121: 2 392 390 377 42.2809 121: 3 392 391 390 377 42.2809 121: 1 1249 219 44.5442 121: 2 1249 1237 219 44.5442 121: 2 1249 1248 219 44.5442 121: 3 1249 1248 1237 219 44.5442 121: 1 950 352 44.7405 121: 2 950 395 352 44.7405 121: 2 1111 950 352 44.7405 121: 3 1111 950 395 352 44.7405 121: 1 1177 1163 45.4513 121: 2 1177 1163 1162 45.4513 121: 2 1177 1164 1163 45.4513 121: 3 1177 1164 1163 1162 45.4513 121: 1 300 4 46.3819 121: 2 300 299 4 46.3819 121: 2 302 300 4 46.3819 121: 3 302 300 299 4 46.3819 121: 1 323 248 46.7048 121: 2 323 248 39 46.7048 121: 2 323 250 248 46.7048 121: 3 323 250 248 39 46.7048 121: 1 1114 950 46.8094 121: 2 1114 950 352 46.8094 121: 2 1114 1111 950 46.8094 121: 3 1114 1111 950 352 46.8094 121: 1 1114 395 47.0748 121: 2 1114 395 352 47.0748 121: 2 1114 950 395 47.0748 121: 3 1114 950 395 352 47.0748 121: 1 764 708 47.5682 121: 2 764 708 704 47.5682 121: 2 764 762 708 47.5682 121: 3 764 762 708 704 47.5682 121: 1 834 161 48.365 121: 2 834 828 161 48.365 121: 2 834 831 161 48.365 121: 3 834 831 828 161 48.365 121: 1 1110 1069 48.8172 121: 2 1110 1094 1069 48.8172 121: 2 1111 1110 1069 48.8172 121: 3 1111 1110 1094 1069 48.8172 121: 1 1118 3 49.1566 121: 2 1118 1117 3 49.1566 121: 2 1120 1118 3 49.1566 121: 3 1120 1118 1117 3 49.1566 121: 1 395 350 49.8181 121: 2 395 352 350 49.8181 121: 2 1114 395 350 49.8181 121: 3 1114 395 352 350 49.8181 121: 1 834 764 50.2103 121: 2 834 828 764 50.2103 121: 2 848 834 764 50.2103 121: 3 848 834 828 764 50.2103 121: 1 764 634 50.2626 121: 2 764 634 218 50.2626 121: 2 764 704 634 50.2626 121: 3 764 704 634 218 50.2626 121: 1 1114 1069 50.6264 121: 2 1114 1069 950 50.6264 121: 2 1114 1111 1069 50.6264 121: 3 1114 1111 1069 950 50.6264 121: 2 1090 1076 1069 50.6848 121: 3 1090 1076 1069 131 50.6848 121: 2 359 352 44 51.6914 121: 3 359 354 352 44 51.6914 121: 1 350 44 52.5004 121: 2 352 350 44 52.5004 121: 2 395 350 44 52.5004 121: 3 395 352 350 44 52.5004 121: 2 834 764 161 52.5599 121: 3 834 828 764 161 52.5599 121: 2 1110 1093 1069 52.8258 121: 3 1110 1094 1093 1069 52.8258 121: 1 950 924 55.9106 121: 2 950 924 538 55.9106 121: 2 950 932 924 55.9106 121: 3 950 932 924 538 55.9106 121: 1 1103 1102 58.8665 121: 2 1103 1102 136 58.8665 121: 2 1105 1103 1102 58.8665 121: 3 1105 1103 1102 136 58.8665 121: 1 545 536 60.96 121: 2 545 536 66 60.96 121: 2 545 538 536 60.96 121: 3 545 538 536 66 60.96 121: 1 764 85 61.3155 121: 2 764 634 85 61.3155 121: 2 764 704 85 61.3155 121: 3 764 704 634 85 61.3155 121: 1 1250 1244 65.6488 121: 2 1250 1244 218 65.6488 121: 2 1250 1246 1244 65.6488 121: 3 1250 1246 1244 218 65.6488 121: 1 166 77 66.9414 121: 2 175 166 77 66.9414 121: 2 197 166 77 66.9414 121: 3 197 175 166 77 66.9414 121: 2 1114 1110 1069 67.4593 121: 3 1114 1111 1110 1069 67.4593 121: 1 1247 1243 67.5911 121: 2 1247 1243 1235 67.5911 121: 2 1247 1245 1243 67.5911 121: 3 1247 1245 1243 1235 67.5911 121: 1 1181 1179 71.2692 121: 2 1181 1179 1172 71.2692 121: 2 1181 1180 1179 71.2692 121: 3 1181 1180 1179 1172 71.2692 121: 1 1244 161 72.5457 121: 2 1244 218 161 72.5457 121: 2 1290 1244 161 72.5457 121: 3 1290 1244 218 161 72.5457 121: 1 725 723 75.828 121: 2 725 723 713 75.828 121: 2 725 724 723 75.828 121: 3 725 724 723 713 75.828 121: 1 637 218 81.7786 121: 2 637 218 175 81.7786 121: 2 637 634 218 81.7786 121: 3 637 634 218 175 81.7786 121: 2 359 350 44 82.4673 121: 3 359 352 350 44 82.4673 121: 2 395 393 392 83.7567 121: 3 395 393 392 378 83.7567 121: 1 498 395 91.9351 121: 2 498 395 393 91.9351 121: 2 538 498 395 91.9351 121: 3 538 498 395 393 91.9351 121: 2 764 761 708 93.1824 121: 3 764 762 761 708 93.1824 121: 1 929 111 95.7593 121: 2 929 914 111 95.7593 121: 2 930 929 111 95.7593 121: 3 930 929 914 111 95.7593 121: 1 708 703 96.0112 121: 2 708 704 703 96.0112 121: 2 711 708 703 96.0112 121: 3 711 708 704 703 96.0112 121: 1 1166 1164 104.238 121: 2 1166 1164 1163 104.238 121: 2 1166 1165 1164 104.238 121: 3 1166 1165 1164 1163 104.238 121: 1 924 395 107.325 121: 2 924 538 395 107.325 121: 2 950 924 395 107.325 121: 3 950 924 538 395 107.325 121: 1 503 392 134.606 121: 2 503 393 392 134.606 121: 2 503 502 392 134.606 121: 3 503 502 393 392 134.606 121: 1 853 775 136.818 121: 2 853 775 95 136.818 121: 2 853 775 765 136.818 121: 3 853 775 765 95 136.818 121: 1 535 522 142.688 121: 2 535 522 521 142.688 121: 2 535 533 522 142.688 121: 3 535 533 522 521 142.688 121: 1 843 106 150.407 121: 2 844 843 106 150.407 121: 2 862 843 106 150.407 121: 3 862 844 843 106 150.407 121: 1 959 954 156.173 121: 2 959 955 954 156.173 121: 2 960 959 954 156.173 121: 3 960 959 955 954 156.173 121: 1 1090 134 156.855 121: 2 1090 1076 134 156.855 121: 2 1090 1088 134 156.855 121: 3 1090 1088 1076 134 156.855 121: 1 1130 1101 167.863 121: 2 1130 1101 136 167.863 121: 2 1149 1130 1101 167.863 121: 3 1149 1130 1101 136 167.863 121: 1 348 41 184.474 121: 2 349 348 41 184.474 121: 2 351 348 41 184.474 121: 3 351 349 348 41 184.474 121: 1 1244 764 186.092 121: 2 1244 764 161 186.092 121: 2 1244 764 218 186.092 121: 3 1244 764 218 161 186.092 121: 1 924 498 187.738 121: 2 924 498 395 187.738 121: 2 924 538 498 187.738 121: 3 924 538 498 395 187.738 121: 1 218 198 199.089 121: 2 218 198 175 199.089 121: 2 218 215 198 199.089 121: 3 218 215 198 175 199.089 121: 1 764 637 204.004 121: 2 764 637 218 204.004 121: 2 764 637 634 204.004 121: 3 764 637 634 218 204.004 121: 1 198 77 235.497 121: 2 198 166 77 235.497 121: 2 198 175 77 235.497 121: 3 198 175 166 77 235.497 121: 1 172 163 250.766 121: 2 172 171 163 250.766 121: 2 173 172 163 250.766 121: 3 173 172 171 163 250.766 121: 1 708 85 255.128 121: 2 708 704 85 255.128 121: 2 764 708 85 255.128 121: 3 764 708 704 85 255.128 121: 1 1244 637 260.437 121: 2 1244 637 218 260.437 121: 2 1244 764 637 260.437 121: 3 1244 764 637 218 260.437 121: 2 223 218 198 284.797 121: 3 223 218 215 198 284.797 121: 1 1283 823 409.134 121: 2 1283 823 158 409.134 121: 2 1283 824 823 409.134 121: 3 1283 824 823 158 409.134 121: 1 1126 1120 506.994 121: 2 1126 1120 3 506.994 121: 2 1127 1126 1120 506.994 121: 3 1127 1126 1120 3 506.994 121: 1 362 6 560.281 121: 2 362 44 6 560.281 121: 2 372 362 6 560.281 121: 3 372 362 44 6 560.281 121: 1 637 85 604.307 121: 2 637 634 85 604.307 121: 2 764 637 85 604.307 121: 3 764 637 634 85 604.307 121: 1 924 533 984.145 121: 2 924 533 498 984.145 121: 2 924 538 533 984.145 121: 3 924 538 533 498 984.145 121: 1 1250 24 1038.62 121: 2 1250 218 24 1038.62 121: 2 1250 1248 24 1038.62 121: 3 1250 1248 218 24 1038.62 121: 1 637 198 2341.64 121: 2 637 198 77 2341.64 121: 2 637 198 175 2341.64 121: 3 637 198 175 77 2341.64 121: 1 545 533 5283.1 121: 2 545 538 533 5283.1 121: 2 924 545 533 5283.1 121: 3 924 545 538 533 5283.1 121: 121/140 Test #121: Simplex_tree_example_alpha_shapes_3_from_off ................................................ Passed 1.05 sec test 122 Start 122: Simplex_tree_example_cech_complex_cgal_mini_sphere_3d 122: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_300.off" "-r" "0.3" "-d" "3" 122: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 122: Test timeout computed to be: 10000000 122: The complex contains 2126 simplices 122: and has dimension 3 122/140 Test #122: Simplex_tree_example_cech_complex_cgal_mini_sphere_3d ....................................... Passed 0.09 sec test 123 Start 123: Simplex_tree_example_graph_expansion_with_blocker 123: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree/Simplex_tree_example_graph_expansion_with_blocker 123: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Simplex_tree 123: Test timeout computed to be: 10000000 123: Blocker on [6, 5, 4, ] ( 10 + 1. ) = 1 123: Blocker on [3, 2, 1, ] ( 5 + 1. ) = 0 123: Blocker on [3, 2, 0, ] ( 5 + 1. ) = 0 123: Blocker on [2, 1, 0, ] ( 3 + 1. ) = 0 123: Blocker on [3, 1, 0, ] ( 4 + 1. ) = 0 123: Blocker on [3, 2, 1, 0, ] ( 6 + 1. ) = 0 123: ******************************************************************** 123: * The complex contains 23 simplices - dimension 3 123: * Iterator on Simplices in the filtration, with [filtration value]: 123: [0] (0) 123: [0] (1)(0) 123: [1] (2)(0) 123: [2] (3)(0) 123: [3] (1) 123: [3] (2)(1) 123: [4] (2)(1)(0) 123: [4] (3)(1) 123: [5] (2) 123: [5] (3)(1)(0) 123: [5] (3)(2) 123: [6] (3)(2)(0) 123: [6] (3)(2)(1) 123: [6] (4)(2) 123: [7] (3) 123: [7] (3)(2)(1)(0) 123: [7] (6)(3) 123: [8] (4) 123: [8] (5)(4) 123: [9] (6)(4) 123: [10] (5) 123: [10] (6) 123: [10] (6)(5) 123/140 Test #123: Simplex_tree_example_graph_expansion_with_blocker ........................................... Passed 0.01 sec test 124 Start 124: Skeleton_blocker_example_from_simplices 124: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker/Skeleton_blocker_example_from_simplices 124: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker 124: Test timeout computed to be: 10000000 124: Simplices: 124: {0} {0,1} {0,2} {0,3} {0,1,2} {0,1,3} {0,2,3} {1} {1,2} {1,3} {1,2,3} {2} {2,3} {3} 124: Blockers: {0,1,2,3} 124: 124: Simplices: 124: {0} {0,1} {0,2} {1} {1,2} {2} 124: Blockers: {0,1,2} 124: 124/140 Test #124: Skeleton_blocker_example_from_simplices ..................................................... Passed 0.01 sec test 125 Start 125: Skeleton_blocker_example_iteration 125: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker/Skeleton_blocker_example_iteration 125: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker 125: Test timeout computed to be: 10000000 125: Vertex 0 125: Vertex 1 125: Vertex 2 125: Vertex 3 125: Vertex 4 125: Vertex 5 125: Vertex 6 125: Vertex 7 125: Vertex 8 125: Vertex 9 125: Vertex 10 125: Vertex 11 125: Vertex 12 125: Vertex 13 125: Vertex 14 125: Saw 15 vertices, 105 edges and 32767 simplices 125: The Euler Characteristic is 1 125: Time to build the complete complex, enumerate simplices and Euler Characteristic: 0.113s 125/140 Test #125: Skeleton_blocker_example_iteration .......................................................... Passed 0.12 sec test 126 Start 126: Skeleton_blocker_example_link 126: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker/Skeleton_blocker_example_link 126: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Skeleton_blocker 126: Test timeout computed to be: 10000000 126: add_simplex: Some vertices were not present in the complex, adding them 126: complex:4 vertices: 126: {0} {1} {2} {3} 126: 126: 6 edges: 126: {0,1} {0,2} {0,3} {1,2} {1,3} {2,3} 126: 126: 0 blockers: 126: 126: 126: link:3 vertices: 126: {0} {2} {3} 126: 126: 3 edges: 126: {0,2} {0,3} {2,3} 126: 126: 0 blockers: 126: 126: 126: link.contains_vertex(Vertex_handle(0)):1 126: link.contains_vertex(Vertex_handle(1)):1 126: link.contains_vertex(Vertex_handle(2)):1 126: link.contains_vertex(Vertex_handle(3)):0 126: link.contains_vertex(Vertex_handle(4)):0 126: 126: link.contains_vertex(Root_vertex_handle(0)):1 126: link.contains_vertex(Root_vertex_handle(1)):0 126: link.contains_vertex(Root_vertex_handle(2)):1 126: link.contains_vertex(Root_vertex_handle(3)):1 126: link.contains_vertex(Root_vertex_handle(4)):0 126/140 Test #126: Skeleton_blocker_example_link ............................................................... Passed 0.01 sec test 127 Start 127: Spatial_searching_example_spatial_searching 127: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Spatial_searching/Spatial_searching_example_spatial_searching 127: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Spatial_searching 127: Test timeout computed to be: 10000000 127: 10 nearest neighbors from points[20]: 127: 20 (sq. dist. = 0) 127: 40 (sq. dist. = 0.0368548) 127: 159 (sq. dist. = 0.0535659) 127: 403 (sq. dist. = 0.0625268) 127: 302 (sq. dist. = 0.0870504) 127: 95 (sq. dist. = 0.0882785) 127: 364 (sq. dist. = 0.112364) 127: 209 (sq. dist. = 0.114946) 127: 236 (sq. dist. = 0.171094) 127: 419 (sq. dist. = 0.175002) 127: Incremental nearest neighbors: 127: 45 (sq. dist. = 0) 127: 101 (sq. dist. = 0.0766543) 127: 57 (sq. dist. = 0.104488) 127: 205 (sq. dist. = 0.124846) 127: 323 (sq. dist. = 0.172615) 127: 28 (sq. dist. = 0.194651) 127: 249 (sq. dist. = 0.233208) 127: 310 (sq. dist. = 0.349283) 127: 343 (sq. dist. = 0.37058) 127: 146 (sq. dist. = 0.382756) 127: 203 (sq. dist. = 0.396782) 127: 482 (sq. dist. = 0.396864) 127: 180 (sq. dist. = 0.478449) 127: 188 (sq. dist. = 0.509545) 127: 301 (sq. dist. = 0.53918) 127: 344 (sq. dist. = 0.540086) 127: 46 (sq. dist. = 0.557241) 127: 288 (sq. dist. = 0.566397) 127: 254 (sq. dist. = 0.57478) 127: 430 (sq. dist. = 0.599261) 127: 69 (sq. dist. = 0.620785) 127: 244 (sq. dist. = 0.667207) 127: 237 (sq. dist. = 0.688706) 127: 41 (sq. dist. = 0.699284) 127: 339 (sq. dist. = 0.719241) 127: 215 (sq. dist. = 0.747408) 127: 76 (sq. dist. = 0.763222) 127: 230 (sq. dist. = 0.776531) 127: 277 (sq. dist. = 0.820709) 127: 29 (sq. dist. = 0.850699) 127: 265 (sq. dist. = 0.853599) 127: 99 (sq. dist. = 0.862982) 127: 376 (sq. dist. = 0.864674) 127: 330 (sq. dist. = 0.904781) 127: 140 (sq. dist. = 0.905651) 127: 317 (sq. dist. = 0.913407) 127: 260 (sq. dist. = 0.938955) 127: 231 (sq. dist. = 0.958882) 127: 393 (sq. dist. = 0.966576) 127: 206 (sq. dist. = 0.975328) 127: 409 (sq. dist. = 1.0001) 127: 324 (sq. dist. = 1.00681) 127: 194 (sq. dist. = 1.01901) 127: 394 (sq. dist. = 1.02322) 127: 149 (sq. dist. = 1.04131) 127: 213 (sq. dist. = 1.06886) 127: 137 (sq. dist. = 1.08157) 127: 2 (sq. dist. = 1.09748) 127: 475 (sq. dist. = 1.10729) 127: 128 (sq. dist. = 1.1244) 127: 67 (sq. dist. = 1.12949) 127: 186 (sq. dist. = 1.14012) 127: 136 (sq. dist. = 1.14054) 127: 398 (sq. dist. = 1.16614) 127: 65 (sq. dist. = 1.17382) 127: 10 (sq. dist. = 1.19326) 127: 391 (sq. dist. = 1.19766) 127: 279 (sq. dist. = 1.23041) 127: 346 (sq. dist. = 1.24116) 127: 52 (sq. dist. = 1.25676) 127: 201 (sq. dist. = 1.2584) 127: 294 (sq. dist. = 1.2703) 127: 50 (sq. dist. = 1.28014) 127: 221 (sq. dist. = 1.28422) 127: 184 (sq. dist. = 1.29446) 127: 481 (sq. dist. = 1.30603) 127: 404 (sq. dist. = 1.31395) 127: 269 (sq. dist. = 1.32394) 127: 239 (sq. dist. = 1.32625) 127: 166 (sq. dist. = 1.33692) 127: 97 (sq. dist. = 1.3453) 127: 446 (sq. dist. = 1.34716) 127: 499 (sq. dist. = 1.34936) 127: 329 (sq. dist. = 1.34959) 127: 337 (sq. dist. = 1.35314) 127: 338 (sq. dist. = 1.35479) 127: 42 (sq. dist. = 1.36763) 127: 305 (sq. dist. = 1.38695) 127: 270 (sq. dist. = 1.38707) 127: 438 (sq. dist. = 1.42415) 127: 143 (sq. dist. = 1.44571) 127: 454 (sq. dist. = 1.47786) 127: 27 (sq. dist. = 1.47983) 127: 426 (sq. dist. = 1.49229) 127: 289 (sq. dist. = 1.49308) 127: 56 (sq. dist. = 1.49875) 127: 452 (sq. dist. = 1.50196) 127: 442 (sq. dist. = 1.50767) 127: 94 (sq. dist. = 1.51348) 127: 4 (sq. dist. = 1.51902) 127: 333 (sq. dist. = 1.53101) 127: 3 (sq. dist. = 1.53218) 127: 35 (sq. dist. = 1.53976) 127: 220 (sq. dist. = 1.55347) 127: 219 (sq. dist. = 1.55928) 127: 437 (sq. dist. = 1.55995) 127: 181 (sq. dist. = 1.56723) 127: 49 (sq. dist. = 1.57772) 127: 132 (sq. dist. = 1.58107) 127: 314 (sq. dist. = 1.60425) 127: 418 (sq. dist. = 1.60719) 127: 111 (sq. dist. = 1.6115) 127: 154 (sq. dist. = 1.61166) 127: 226 (sq. dist. = 1.61177) 127: 495 (sq. dist. = 1.61219) 127: 326 (sq. dist. = 1.61463) 127: 47 (sq. dist. = 1.61597) 127: 335 (sq. dist. = 1.61752) 127: 424 (sq. dist. = 1.62328) 127: 96 (sq. dist. = 1.62707) 127: 139 (sq. dist. = 1.63994) 127: 145 (sq. dist. = 1.63995) 127: 89 (sq. dist. = 1.6402) 127: 268 (sq. dist. = 1.64107) 127: 486 (sq. dist. = 1.64333) 127: 319 (sq. dist. = 1.65767) 127: 389 (sq. dist. = 1.66195) 127: 126 (sq. dist. = 1.6638) 127: 85 (sq. dist. = 1.68267) 127: 123 (sq. dist. = 1.6999) 127: 380 (sq. dist. = 1.70307) 127: 303 (sq. dist. = 1.70398) 127: 37 (sq. dist. = 1.70591) 127: 88 (sq. dist. = 1.71083) 127: 386 (sq. dist. = 1.73307) 127: 308 (sq. dist. = 1.7346) 127: 33 (sq. dist. = 1.75039) 127: 90 (sq. dist. = 1.75731) 127: 353 (sq. dist. = 1.7593) 127: 458 (sq. dist. = 1.75976) 127: 374 (sq. dist. = 1.77825) 127: 429 (sq. dist. = 1.78392) 127: 173 (sq. dist. = 1.79296) 127: 107 (sq. dist. = 1.8004) 127: 53 (sq. dist. = 1.8008) 127: 408 (sq. dist. = 1.80795) 127: 73 (sq. dist. = 1.82151) 127: 255 (sq. dist. = 1.84272) 127: 135 (sq. dist. = 1.865) 127: 105 (sq. dist. = 1.88175) 127: 378 (sq. dist. = 1.90052) 127: 328 (sq. dist. = 1.90241) 127: 148 (sq. dist. = 1.91574) 127: 459 (sq. dist. = 1.9269) 127: 327 (sq. dist. = 1.93611) 127: 92 (sq. dist. = 1.98104) 127: 34 (sq. dist. = 1.98244) 127: 84 (sq. dist. = 1.98586) 127: 168 (sq. dist. = 2.00374) 127: 13 (sq. dist. = 2.01137) 127: 396 (sq. dist. = 2.02485) 127: 36 (sq. dist. = 2.03072) 127: 104 (sq. dist. = 2.03186) 127: 191 (sq. dist. = 2.03291) 127: 415 (sq. dist. = 2.04159) 127: 152 (sq. dist. = 2.05095) 127: 51 (sq. dist. = 2.05751) 127: 130 (sq. dist. = 2.05891) 127: 208 (sq. dist. = 2.06424) 127: 59 (sq. dist. = 2.06693) 127: 342 (sq. dist. = 2.07096) 127: 316 (sq. dist. = 2.09102) 127: 171 (sq. dist. = 2.1014) 127: 397 (sq. dist. = 2.11105) 127: 162 (sq. dist. = 2.1224) 127: 480 (sq. dist. = 2.16184) 127: 210 (sq. dist. = 2.1872) 127: 62 (sq. dist. = 2.21039) 127: 24 (sq. dist. = 2.2186) 127: 321 (sq. dist. = 2.22512) 127: 332 (sq. dist. = 2.23213) 127: 147 (sq. dist. = 2.23318) 127: 370 (sq. dist. = 2.25246) 127: 55 (sq. dist. = 2.25829) 127: 9 (sq. dist. = 2.26871) 127: 379 (sq. dist. = 2.28777) 127: 439 (sq. dist. = 2.28913) 127: 82 (sq. dist. = 2.2935) 127: 369 (sq. dist. = 2.29541) 127: 200 (sq. dist. = 2.31567) 127: 253 (sq. dist. = 2.32585) 127: 129 (sq. dist. = 2.33319) 127: 119 (sq. dist. = 2.33631) 127: 413 (sq. dist. = 2.33911) 127: 17 (sq. dist. = 2.35649) 127: 453 (sq. dist. = 2.37398) 127: 167 (sq. dist. = 2.37532) 127: 124 (sq. dist. = 2.37819) 127: 207 (sq. dist. = 2.38972) 127: 340 (sq. dist. = 2.40144) 127: 199 (sq. dist. = 2.4135) 127: 262 (sq. dist. = 2.41736) 127: 151 (sq. dist. = 2.43095) 127: 138 (sq. dist. = 2.43281) 127: 461 (sq. dist. = 2.45415) 127: 464 (sq. dist. = 2.46183) 127: 25 (sq. dist. = 2.47267) 127: 447 (sq. dist. = 2.50451) 127: 490 (sq. dist. = 2.52726) 127: 121 (sq. dist. = 2.5273) 127: 411 (sq. dist. = 2.5304) 127: 102 (sq. dist. = 2.55526) 127: 5 (sq. dist. = 2.57612) 127: 106 (sq. dist. = 2.58376) 127: 448 (sq. dist. = 2.60094) 127: 264 (sq. dist. = 2.60264) 127: 402 (sq. dist. = 2.6037) 127: 465 (sq. dist. = 2.6061) 127: 456 (sq. dist. = 2.60821) 127: 32 (sq. dist. = 2.61015) 127: 183 (sq. dist. = 2.61024) 127: 284 (sq. dist. = 2.61085) 127: 449 (sq. dist. = 2.62189) 127: 43 (sq. dist. = 2.62248) 127: 428 (sq. dist. = 2.62351) 127: 387 (sq. dist. = 2.62899) 127: 286 (sq. dist. = 2.63516) 127: 259 (sq. dist. = 2.6549) 127: 304 (sq. dist. = 2.674) 127: 375 (sq. dist. = 2.67933) 127: 423 (sq. dist. = 2.68445) 127: 345 (sq. dist. = 2.716) 127: 296 (sq. dist. = 2.73383) 127: 273 (sq. dist. = 2.73787) 127: 282 (sq. dist. = 2.73801) 127: 462 (sq. dist. = 2.74577) 127: 70 (sq. dist. = 2.77847) 127: 290 (sq. dist. = 2.77881) 127: 275 (sq. dist. = 2.79394) 127: 309 (sq. dist. = 2.79654) 127: 246 (sq. dist. = 2.82647) 127: 474 (sq. dist. = 2.83148) 127: 251 (sq. dist. = 2.83958) 127: 202 (sq. dist. = 2.84007) 127: 248 (sq. dist. = 2.85086) 127: 298 (sq. dist. = 2.89221) 127: 100 (sq. dist. = 2.89392) 127: 311 (sq. dist. = 2.94011) 127: 64 (sq. dist. = 2.94345) 127: 470 (sq. dist. = 2.94683) 127: 156 (sq. dist. = 2.94714) 127: 120 (sq. dist. = 2.95614) 127: 21 (sq. dist. = 2.96031) 127: 224 (sq. dist. = 2.96179) 127: 468 (sq. dist. = 2.97807) 127: 113 (sq. dist. = 2.99581) 127: 401 (sq. dist. = 3.0164) 127: 360 (sq. dist. = 3.0293) 127: 245 (sq. dist. = 3.03406) 127: 497 (sq. dist. = 3.04791) 127: 258 (sq. dist. = 3.0589) 127: 44 (sq. dist. = 3.06666) 127: 281 (sq. dist. = 3.07046) 127: 280 (sq. dist. = 3.0766) 127: 157 (sq. dist. = 3.10549) 127: 185 (sq. dist. = 3.11854) 127: 266 (sq. dist. = 3.12102) 127: 227 (sq. dist. = 3.1237) 127: 232 (sq. dist. = 3.13385) 127: 425 (sq. dist. = 3.14156) 127: 318 (sq. dist. = 3.14264) 127: 256 (sq. dist. = 3.14299) 127: 306 (sq. dist. = 3.15424) 127: 117 (sq. dist. = 3.1697) 127: 479 (sq. dist. = 3.18367) 127: 30 (sq. dist. = 3.18742) 127: 263 (sq. dist. = 3.19311) 127: 14 (sq. dist. = 3.19712) 127: 155 (sq. dist. = 3.20927) 127: 271 (sq. dist. = 3.2118) 127: 261 (sq. dist. = 3.21446) 127: 133 (sq. dist. = 3.22735) 127: 197 (sq. dist. = 3.24458) 127: 372 (sq. dist. = 3.24686) 127: 212 (sq. dist. = 3.24978) 127: 348 (sq. dist. = 3.25464) 127: 357 (sq. dist. = 3.27151) 127: 257 (sq. dist. = 3.27202) 127: 109 (sq. dist. = 3.29239) 127: 196 (sq. dist. = 3.2937) 127: 381 (sq. dist. = 3.30851) 127: 12 (sq. dist. = 3.31037) 127: 434 (sq. dist. = 3.31871) 127: 488 (sq. dist. = 3.3295) 127: 19 (sq. dist. = 3.33274) 127: 150 (sq. dist. = 3.33488) 127: 78 (sq. dist. = 3.36767) 127: 169 (sq. dist. = 3.37021) 127: 382 (sq. dist. = 3.38346) 127: 278 (sq. dist. = 3.39624) 127: 225 (sq. dist. = 3.41156) 127: 383 (sq. dist. = 3.4162) 127: 498 (sq. dist. = 3.42857) 127: 315 (sq. dist. = 3.44195) 127: 131 (sq. dist. = 3.44986) 127: 433 (sq. dist. = 3.48133) 127: 23 (sq. dist. = 3.4834) 127: 40 (sq. dist. = 3.48545) 127: 467 (sq. dist. = 3.49171) 127: 118 (sq. dist. = 3.49193) 127: 450 (sq. dist. = 3.50051) 127: 473 (sq. dist. = 3.50623) 127: 371 (sq. dist. = 3.51056) 127: 291 (sq. dist. = 3.51389) 127: 80 (sq. dist. = 3.53545) 127: 172 (sq. dist. = 3.54535) 127: 60 (sq. dist. = 3.56797) 127: 483 (sq. dist. = 3.61942) 127: 276 (sq. dist. = 3.62078) 127: 414 (sq. dist. = 3.62188) 127: 178 (sq. dist. = 3.62913) 127: 164 (sq. dist. = 3.63245) 127: 476 (sq. dist. = 3.63402) 127: 236 (sq. dist. = 3.65629) 127: 422 (sq. dist. = 3.66871) 127: 285 (sq. dist. = 3.6711) 127: 477 (sq. dist. = 3.68379) 127: 400 (sq. dist. = 3.68793) 127: 361 (sq. dist. = 3.70301) 127: 322 (sq. dist. = 3.7175) 127: 399 (sq. dist. = 3.72042) 127: 358 (sq. dist. = 3.72299) 127: 235 (sq. dist. = 3.72542) 127: 432 (sq. dist. = 3.73064) 127: 214 (sq. dist. = 3.74582) 127: 18 (sq. dist. = 3.75641) 127: 26 (sq. dist. = 3.75651) 127: 91 (sq. dist. = 3.77131) 127: 177 (sq. dist. = 3.78325) 127: 122 (sq. dist. = 3.7898) 127: 20 (sq. dist. = 3.79088) 127: 127 (sq. dist. = 3.79445) 127: 359 (sq. dist. = 3.80974) 127: 217 (sq. dist. = 3.82355) 127: 366 (sq. dist. = 3.83032) 127: 95 (sq. dist. = 3.83299) 127: 405 (sq. dist. = 3.83656) 127: 368 (sq. dist. = 3.85035) 127: 471 (sq. dist. = 3.86159) 127: 451 (sq. dist. = 3.86513) 127: 247 (sq. dist. = 3.87858) 127: 31 (sq. dist. = 3.87878) 127: 22 (sq. dist. = 3.89181) 127: 267 (sq. dist. = 3.91329) 127: 307 (sq. dist. = 3.9174) 127: 274 (sq. dist. = 3.91831) 127: 272 (sq. dist. = 3.92508) 127: 407 (sq. dist. = 3.94048) 127: 355 (sq. dist. = 3.95801) 127: 15 (sq. dist. = 3.98242) 127: 403 (sq. dist. = 4.00506) 127: 108 (sq. dist. = 4.00951) 127: 114 (sq. dist. = 4.01756) 127: 487 (sq. dist. = 4.01873) 127: 141 (sq. dist. = 4.03141) 127: 240 (sq. dist. = 4.03689) 127: 238 (sq. dist. = 4.04616) 127: 86 (sq. dist. = 4.10562) 127: 392 (sq. dist. = 4.10727) 127: 431 (sq. dist. = 4.11113) 127: 373 (sq. dist. = 4.113) 127: 174 (sq. dist. = 4.11612) 127: 334 (sq. dist. = 4.11674) 127: 115 (sq. dist. = 4.12073) 127: 66 (sq. dist. = 4.13694) 127: 216 (sq. dist. = 4.15339) 127: 410 (sq. dist. = 4.15384) 127: 75 (sq. dist. = 4.15725) 127: 165 (sq. dist. = 4.16246) 127: 198 (sq. dist. = 4.17904) 127: 176 (sq. dist. = 4.18256) 127: 192 (sq. dist. = 4.18391) 127: 463 (sq. dist. = 4.18881) 127: 228 (sq. dist. = 4.22029) 127: 81 (sq. dist. = 4.23582) 127: 420 (sq. dist. = 4.24022) 127: 412 (sq. dist. = 4.24122) 127: 417 (sq. dist. = 4.27085) 127: 6 (sq. dist. = 4.27347) 127: 496 (sq. dist. = 4.28183) 127: 416 (sq. dist. = 4.28533) 127: 427 (sq. dist. = 4.31232) 127: 142 (sq. dist. = 4.33997) 127: 302 (sq. dist. = 4.37876) 127: 364 (sq. dist. = 4.38859) 127: 445 (sq. dist. = 4.39212) 127: 229 (sq. dist. = 4.41792) 127: 222 (sq. dist. = 4.42271) 127: 159 (sq. dist. = 4.42338) 127: 187 (sq. dist. = 4.43722) 127: 233 (sq. dist. = 4.46207) 127: 377 (sq. dist. = 4.51083) 127: 484 (sq. dist. = 4.52842) 127: 161 (sq. dist. = 4.52952) 127: 457 (sq. dist. = 4.5307) 127: 242 (sq. dist. = 4.54209) 127: 436 (sq. dist. = 4.55037) 127: 112 (sq. dist. = 4.57071) 127: 485 (sq. dist. = 4.57295) 127: 182 (sq. dist. = 4.59532) 127: 71 (sq. dist. = 4.60431) 127: 158 (sq. dist. = 4.60642) 127: 295 (sq. dist. = 4.61462) 127: 170 (sq. dist. = 4.62149) 127: 367 (sq. dist. = 4.64684) 127: 492 (sq. dist. = 4.65383) 127: 351 (sq. dist. = 4.65472) 127: 313 (sq. dist. = 4.68436) 127: 469 (sq. dist. = 4.69097) 127: 87 (sq. dist. = 4.70182) 127: 363 (sq. dist. = 4.70704) 127: 68 (sq. dist. = 4.71944) 127: 209 (sq. dist. = 4.72837) 127: 419 (sq. dist. = 4.77265) 127: 153 (sq. dist. = 4.79298) 127: 243 (sq. dist. = 4.83349) 127: 134 (sq. dist. = 4.83945) 127: 443 (sq. dist. = 4.85563) 127: 72 (sq. dist. = 4.89145) 127: 478 (sq. dist. = 4.89147) 127: 347 (sq. dist. = 4.9453) 127: 77 (sq. dist. = 5.00438) 127: 125 (sq. dist. = 5.01143) 127: 312 (sq. dist. = 5.02412) 127: 356 (sq. dist. = 5.02529) 127: 325 (sq. dist. = 5.07993) 127: 195 (sq. dist. = 5.08001) 127: 250 (sq. dist. = 5.10779) 127: 223 (sq. dist. = 5.11089) 127: 103 (sq. dist. = 5.12846) 127: 116 (sq. dist. = 5.18546) 127: 472 (sq. dist. = 5.19337) 127: 491 (sq. dist. = 5.21901) 127: 211 (sq. dist. = 5.22296) 127: 384 (sq. dist. = 5.24045) 127: 362 (sq. dist. = 5.2702) 127: 110 (sq. dist. = 5.27673) 127: 365 (sq. dist. = 5.28893) 127: 440 (sq. dist. = 5.30647) 127: 163 (sq. dist. = 5.30686) 127: 218 (sq. dist. = 5.31216) 127: 283 (sq. dist. = 5.32815) 127: 341 (sq. dist. = 5.33972) 127: 39 (sq. dist. = 5.35798) 127: 8 (sq. dist. = 5.37128) 127: 189 (sq. dist. = 5.38088) 127: 74 (sq. dist. = 5.40187) 127: 234 (sq. dist. = 5.43391) 127: 193 (sq. dist. = 5.44151) 127: 144 (sq. dist. = 5.48034) 127: 350 (sq. dist. = 5.61209) 127: 79 (sq. dist. = 5.64861) 127: 160 (sq. dist. = 5.65302) 127: 455 (sq. dist. = 5.6579) 127: 444 (sq. dist. = 5.6642) 127: 293 (sq. dist. = 5.73132) 127: 435 (sq. dist. = 5.74351) 127: 336 (sq. dist. = 5.76901) 127: 354 (sq. dist. = 5.80024) 127: 10 furthest neighbors from points[20]: 127: 19 (sq. dist. = 7.46337) 127: 405 (sq. dist. = 7.40765) 127: 141 (sq. dist. = 7.25459) 127: 118 (sq. dist. = 7.13657) 127: 5 (sq. dist. = 6.65196) 127: 23 (sq. dist. = 6.59022) 127: 113 (sq. dist. = 6.57702) 127: 178 (sq. dist. = 6.17447) 127: 480 (sq. dist. = 6.0561) 127: 275 (sq. dist. = 6.01038) 127: Incremental furthest neighbors: 127: 349 (sq. dist. = 7.97751) 127: 352 (sq. dist. = 7.89668) 127: 460 (sq. dist. = 7.85411) 127: 252 (sq. dist. = 7.78164) 127: 190 (sq. dist. = 7.64482) 127: 292 (sq. dist. = 7.63684) 127: 297 (sq. dist. = 7.5643) 127: 48 (sq. dist. = 7.56166) 127: 16 (sq. dist. = 7.15447) 127: 494 (sq. dist. = 7.14841) 127: 38 (sq. dist. = 7.10134) 127: 204 (sq. dist. = 7.08628) 127: 98 (sq. dist. = 7.07838) 127: 320 (sq. dist. = 7.07209) 127: 390 (sq. dist. = 7.00681) 127: 63 (sq. dist. = 6.96744) 127: 11 (sq. dist. = 6.936) 127: 61 (sq. dist. = 6.91802) 127: 385 (sq. dist. = 6.88808) 127: 300 (sq. dist. = 6.88279) 127: 93 (sq. dist. = 6.72747) 127: 441 (sq. dist. = 6.71288) 127: 299 (sq. dist. = 6.69362) 127: 395 (sq. dist. = 6.63444) 127: 241 (sq. dist. = 6.50869) 127: 421 (sq. dist. = 6.45801) 127: 287 (sq. dist. = 6.40909) 127: 175 (sq. dist. = 6.341) 127: 388 (sq. dist. = 6.24097) 127: 58 (sq. dist. = 6.24067) 127: 83 (sq. dist. = 6.21228) 127: 1 (sq. dist. = 6.16911) 127: 466 (sq. dist. = 6.1129) 127: 331 (sq. dist. = 6.05866) 127: 489 (sq. dist. = 6.00916) 127: 493 (sq. dist. = 5.98705) 127: 406 (sq. dist. = 5.94371) 127: 179 (sq. dist. = 5.93511) 127: 54 (sq. dist. = 5.91819) 127: 7 (sq. dist. = 5.88886) 127: All-near-neighbors search: 127: 45 (sq. dist. = 0) 127: 101 (sq. dist. = 0.0766543) 127: 249 (sq. dist. = 0.233208) 127: 57 (sq. dist. = 0.104488) 127: 323 (sq. dist. = 0.172615) 127: 28 (sq. dist. = 0.194651) 127: 205 (sq. dist. = 0.124846) 127/140 Test #127: Spatial_searching_example_spatial_searching ................................................. Passed 0.02 sec test 128 Start 128: Subsampling_example_pick_n_random_points 128: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/Subsampling_example_pick_n_random_points 128: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling 128: Test timeout computed to be: 10000000 128: Before sparsification: 500 points. 128: After sparsification: 100 points. 128/140 Test #128: Subsampling_example_pick_n_random_points .................................................... Passed 0.01 sec test 129 Start 129: Subsampling_example_choose_n_farthest_points 129: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/Subsampling_example_choose_n_farthest_points 129: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling 129: Test timeout computed to be: 10000000 129: Before sparsification: 500 points. 129: After sparsification: 100 points. 129/140 Test #129: Subsampling_example_choose_n_farthest_points ................................................ Passed 0.01 sec test 130 Start 130: Subsampling_example_sparsify_point_set 130: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling/Subsampling_example_sparsify_point_set 130: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Subsampling 130: Test timeout computed to be: 10000000 130: Before sparsification: 500 points. 130: After sparsification: 76 points. 130/140 Test #130: Subsampling_example_sparsify_point_set ...................................................... Passed 0.01 sec test 131 Start 131: Tangential_complex_example_basic 131: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex/Tangential_complex_example_basic 131: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex 131: Test timeout computed to be: 10000000 131: 131: ========================================================== 131: Inconsistencies: 131: * Total number of simplices in stars (incl. duplicates): 588 131: * Number of inconsistent simplices in stars (incl. duplicates): 0 (0%) 131: * Number of stars containing inconsistent simplices: 0 (0%) 131: ========================================================== 131/140 Test #131: Tangential_complex_example_basic ............................................................ Passed 0.03 sec test 132 Start 132: Tangential_complex_example_with_perturb 132: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex/Tangential_complex_example_with_perturb 132: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Tangential_complex 132: Test timeout computed to be: 10000000 132/140 Test #132: Tangential_complex_example_with_perturb ..................................................... Passed 0.01 sec test 133 Start 133: Toplex_map_example_simple_toplex_map 133: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Toplex_map/Toplex_map_example_simple_toplex_map 133: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Toplex_map 133: Test timeout computed to be: 10000000 133: num max simplices = 2 - num vertices = 5 133: Maximal cofaces of {2, 3} are : 133: 1, 2, 3, 133: 2, 3, 4, 5, 133: Maximal simplices are : 133: 1, 2, 3, 133: 2, 3, 4, 5, 133: After contraction(1, 3) - 3 133: num max simplices = 1 - num vertices = 4 133: Maximal simplices are : 133: 2, 3, 4, 5, 133: After contraction(3, 4) - 4 133: num max simplices = 1 - num vertices = 3 133: Maximal simplices are : 133: 2, 4, 5, 133: After remove_simplex(1, 2, 3) 133: num max simplices = 3 - num vertices = 5 133: Maximal simplices are : 133: 2, 3, 4, 5, 133: 1, 3, 133: 1, 2, 133: After remove_vertex(1) 133: num max simplices = 1 - num vertices = 4 133: Maximal simplices are : 133: 2, 3, 4, 5, 133/140 Test #133: Toplex_map_example_simple_toplex_map ........................................................ Passed 0.01 sec test 134 Start 134: Witness_complex_example_nearest_landmark_table 134: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/Witness_complex_example_nearest_landmark_table 134: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex 134: Test timeout computed to be: 10000000 134: Number of simplices: 31 134: 11 0 0 inf 134: 11 1 0 0.1 134: 11 0 0 0 134: 11 0 0 0 134: 11 0 0 0 134: 11 0 0 0 134: 11 1 0.1 0.1 134: 11 1 0.1 0.1 134: 11 1 0.1 0.1 134: 11 2 0.1 0.1 134: 11 1 0.1 0.1 134: 11 1 0.1 0.1 134: 11 2 0.1 0.1 134: 11 2 0.1 0.1 134: 11 2 0.1 0.1 134: 11 3 0.1 0.1 134/140 Test #134: Witness_complex_example_nearest_landmark_table .............................................. Passed 0.01 sec test 135 Start 135: Witness_complex_example_off_test_torus 135: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/Witness_complex_example_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "20" "1.0" "3" 135: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex 135: Test timeout computed to be: 10000000 135: Successfully read 1307 points. 135: Ambient dimension is 3. 135: Witness complex took 0.129137 s. 135: Number of simplices is: 1297 135/140 Test #135: Witness_complex_example_off_test_torus ...................................................... Passed 0.14 sec test 136 Start 136: Witness_complex_example_test_sphere_10 136: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/Witness_complex_example_sphere "10" 136: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex 136: Test timeout computed to be: 10000000 136: Successfully generated 500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.004172 s. 136: Number of simplices is: 81 136: Successfully generated 1000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.008755 s. 136: Number of simplices is: 111 136: Successfully generated 1500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.012367 s. 136: Number of simplices is: 92 136: Successfully generated 2000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.01635 s. 136: Number of simplices is: 91 136: Successfully generated 2500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.022331 s. 136: Number of simplices is: 101 136: Successfully generated 3000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.026755 s. 136: Number of simplices is: 104 136: Successfully generated 3500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.031682 s. 136: Number of simplices is: 104 136: Successfully generated 4000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.037356 s. 136: Number of simplices is: 113 136: Successfully generated 4500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.041893 s. 136: Number of simplices is: 110 136: Successfully generated 5000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.046668 s. 136: Number of simplices is: 107 136: Successfully generated 5500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.049765 s. 136: Number of simplices is: 114 136: Successfully generated 6000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.053079 s. 136: Number of simplices is: 108 136: Successfully generated 6500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.05885 s. 136: Number of simplices is: 105 136: Successfully generated 7000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.062048 s. 136: Number of simplices is: 95 136: Successfully generated 7500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.063768 s. 136: Number of simplices is: 101 136: Successfully generated 8000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.073852 s. 136: Number of simplices is: 114 136: Successfully generated 8500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.07675 s. 136: Number of simplices is: 118 136: Successfully generated 9000 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.083473 s. 136: Number of simplices is: 115 136: Successfully generated 9500 points. 136: Ambient dimension is 4. 136: Witness complex for 10 landmarks took 0.066793 s. 136: Number of simplices is: 97 136/140 Test #136: Witness_complex_example_test_sphere_10 ...................................................... Passed 1.04 sec test 137 Start 137: Witness_complex_example_strong_off_test_torus 137: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex/Witness_complex_example_strong_off "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "20" "1.0" "3" 137: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Witness_complex 137: Test timeout computed to be: 10000000 137: Successfully read 1307 points. 137: Ambient dimension is 3. 137: Strong witness complex took 0.044231 s. 137: Number of simplices is: 1364 137/140 Test #137: Witness_complex_example_strong_off_test_torus ............................................... Passed 0.05 sec test 138 Start 138: Witness_complex_strong_test_torus_persistence 138: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex/Witness_complex_strong_witness_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-l" "20" "-a" "0.5" 138: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex 138: Test timeout computed to be: 10000000 138: Successfully read 1307 points. 138: Ambient dimension is 3. 138: The complex contains 636 simplices 138: and has dimension 6 138: 11 1 0.00760422 inf 138: 11 0 0 inf 138: 11 2 0.0685417 0.213367 138: 11 2 0.0619562 0.200229 138: 11 2 0.0677776 0.200942 138: 11 2 0.0695598 0.18494 138: 11 1 0.00721121 0.0703718 138: 11 1 0.00531452 0.0637875 138: 11 2 0.0760869 0.133389 138: 11 1 0.00373029 0.0602818 138: 11 1 0.00655706 0.0630692 138: 11 1 0.00571434 0.0615768 138: 11 1 0.00830148 0.0609043 138: 11 1 0.0088843 0.0553922 138: 11 1 0.0126472 0.0551373 138: 11 1 0.0149458 0.0522045 138: 11 1 0.00886693 0.0454324 138: 11 1 0.0167976 0.048035 138: 11 1 0.0275349 0.0558847 138: 11 1 0.0124624 0.0403938 138: 11 1 0.0147035 0.0419111 138: 11 1 0.0109216 0.0366653 138: 11 1 0.00478273 0.0303964 138: 11 1 0.0169676 0.0393517 138: 11 1 0.0039673 0.0248839 138: 11 1 0.00552836 0.0259126 138: 11 1 0.00998149 0.0278175 138: 11 2 0.0861056 0.103646 138: 11 1 0.0210082 0.0308175 138: 11 1 0.00375292 0.0123575 138: 11 1 0.0107705 0.0182014 138: 11 0 0 0.00667402 138: 11 1 0.0114395 0.0178274 138: 11 0 0 0.00538448 138: 11 0 0 0.0051952 138: 11 0 0 0.00462227 138: 11 0 0 0.00459489 138: 11 0 0 0.00349811 138: 11 0 0 0.00294483 138: 11 0 0 0.00290498 138: 11 0 0 0.00264549 138: 11 0 0 0.00255021 138: 11 0 0 0.00238628 138: 11 0 0 0.00217405 138: 11 0 0 0.00204977 138: 11 0 0 0.0019129 138: 11 0 0 0.000855498 138: 11 0 0 0.000744451 138: 11 0 0 0.000561282 138: 11 0 0 0.000129064 138: 11 0 0 1.26818e-05 138/140 Test #138: Witness_complex_strong_test_torus_persistence ............................................... Passed 0.01 sec test 139 Start 139: Witness_complex_weak_test_torus_persistence 139: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex/Witness_complex_weak_witness_persistence "/build/gudhi-3.7.1+dfsg/build/userversion/data/points/tore3D_1307.off" "-l" "20" "-a" "0.5" 139: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/utilities/Witness_complex 139: Test timeout computed to be: 10000000 139: Successfully read 1307 points. 139: Ambient dimension is 3. 139: The complex contains 536 simplices 139: and has dimension 6 139: 11 0 0 inf 139: 11 1 0 inf 139: 11 2 0 0.00777418 139/140 Test #139: Witness_complex_weak_test_torus_persistence ................................................. Passed 0.10 sec test 140 Start 140: Nerve_GIC_example_CoordGIC 140: Test command: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC/CoordGIC "/build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC/tore3D_1307.off" "0" 140: Working Directory: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC 140: Test timeout computed to be: 10000000 140: /build/gudhi-3.7.1+dfsg/build/userversion/build/example/Nerve_GIC/tore3D_1307.off_sc.dot file generated. It can be visualized with e.g. neato. 140/140 Test #140: Nerve_GIC_example_CoordGIC .................................................................. Passed 4.46 sec 100% tests passed, 0 tests failed out of 140 Total Test time (real) = 40.21 sec make[2]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--no-parallel dh_prep -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_auto_install --buildsystem=cmake --no-parallel --sourcedir=build/userversion --builddirectory=build/userversion/build cd build/userversion/build && make -j1 install DESTDIR=/build/gudhi-3.7.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' /usr/bin/cmake -S/build/gudhi-3.7.1+dfsg/build/userversion -B/build/gudhi-3.7.1+dfsg/build/userversion/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/share/gudhi/GUDHIConfig.cmake -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/share/gudhi/GUDHIConfigVersion.cmake -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/GIC.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Witness_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Witness_complex -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Witness_complex/all_faces_in.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Strong_witness_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Euclidean_witness_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Euclidean_strong_witness_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Active_witness -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Active_witness/Active_witness.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Active_witness/Active_witness_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Toplex_map.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Lazy_toplex_map.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/Simplicial_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/config.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/utilities.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/sparsify_point_set.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/pick_n_random_points.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/choose_n_farthest_points.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Kd_tree_search.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_simplifiable_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_link_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_geometric_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal/Top_faces.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal/Trie.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_siblings.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/indexing_tag.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Sparse_rips_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Rips_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Field_Zp.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Multi_field.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/read_persistence_from_file.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/common_persistence_representations.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Sliced_Wasserstein.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_vectors.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_landscape_on_grid.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_landscape.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_intervals_with_distances.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_intervals.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_heat_maps.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/PSSK.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Hasse_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Sphere_circumradius.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Cech_complex_blocker.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Cech_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Combination_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Integer_combination_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Ordered_set_partition_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Permutahedral_representation_iterators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Permutation_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Set_partition_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Simplex_comparator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/Size_range.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Permutahedral_representation/face_from_indices.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Manifold_tracing.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Implicit_manifold_intersection_oracle.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/IO -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/IO/Mesh_medit.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/IO/build_mesh_from_cell_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/IO/output_debug_traces_to_html.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/IO/output_meshes_to_medit.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Cartesian_product.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Constant_function.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Embed_in_Rd.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_Sm_in_Rd.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_affine_plane_in_Rd.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_chair_in_R3.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_iron_in_R3.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_lemniscate_revolution_in_R3.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_moment_curve_in_Rd.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_torus_in_R3.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Function_whitney_umbrella_in_R3.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Linear_transformation.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Negation.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/PL_approximation.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/Translate.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Functions/random_orthogonal_matrix.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Freudenthal_triangulation.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Coxeter_triangulation.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Coxeter_triangulation -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Coxeter_triangulation/Cell_complex -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Coxeter_triangulation/Cell_complex/Cell_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Coxeter_triangulation/Cell_complex/Hasse_diagram_cell.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Coxeter_triangulation/Query_result.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_contractor.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Edge_contraction.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/Edge_profile.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Contraction_visitor.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Cost_policy.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Dummy_valid_contraction.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Edge_length_cost.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/First_vertex_placement.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Link_condition_valid_contraction.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Middle_placement.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Placement_policy.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Valid_contraction_policy.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Flag_complex_edge_collapser.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Persistence_graph.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Neighbors_finder.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Internal_point.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Graph_matching.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Bottleneck.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex_base.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex/counter.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Alpha_complex_options.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Alpha_complex_3d.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Alpha_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Alpha_complex -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Alpha_complex/Alpha_kernel_d.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/writing_persistence_to_file.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/reader_utils.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/random_point_generators.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/graph_simplicial_complex.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/distance_functions.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/console_color.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/allocator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Unitary_tests_utils.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Simple_object_pool.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Points_off_io.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Points_3D_off_io.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Point.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Off_reader.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Null_output_iterator.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Debug_utils.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/include/gudhi/Clock.h -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/off_file_from_shape_generator -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/alpha_complex_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/alpha_complex_3d_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/cubical_complex_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/periodic_cubical_complex_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/bottleneck_distance -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/cech_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/point_cloud_edge_collapse_rips_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/distance_matrix_edge_collapse_rips_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_pssk -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_p_h_m_weighted_by_arctan_of_their_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_p_h_m_weighted_by_distance_from_diagonal -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_p_h_m_weighted_by_squared_diag_distance -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_persistence_heat_maps -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_persistence_heat_map -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/average_persistence_heat_maps -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_distance_of_persistence_heat_maps -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_persistence_heat_maps -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_histogram_of_intervals_lengths -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_persistence_intervals -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_persistence_Betti_numbers -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_birth_death_range_in_persistence_diagram -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_number_of_dominant_intervals -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_bottleneck_distance -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_landscapes -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_landscapes -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/average_landscapes -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_distance_of_landscapes -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_landscapes -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_landscapes_on_grid -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_landscapes_on_grid -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/average_landscapes_on_grid -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_distance_of_landscapes_on_grid -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_landscapes_on_grid -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/create_persistence_vectors -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/plot_persistence_vectors -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/average_persistence_vectors -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_distance_of_persistence_vectors -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_persistence_vectors -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/rips_distance_matrix_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/rips_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/rips_correlation_matrix_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/sparse_rips_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/Witness_complex_strong_witness_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/Witness_complex_weak_witness_persistence -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/Nerve -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/VoronoiGIC -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/KeplerMapperVisuFromTxtFile.py -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/km.py -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/km.py.COPYRIGHT -- Installing: /build/gudhi-3.7.1+dfsg/debian/tmp/usr/bin/GudhUI make[2]: Leaving directory '/build/gudhi-3.7.1+dfsg/build/userversion/build' for py3ver in 3.11 ; do \ cd build-py$py3ver/userversion/build/python ; \ /usr/bin/python$py3ver setup.py install --root=../../../../debian/tmp --single-version-externally-managed --install-layout=deb ; \ done /usr/lib/python3/dist-packages/pythran/tables.py:4530: FutureWarning: In the future `np.bool` will be defined as the corresponding NumPy scalar. if not hasattr(numpy, method): /usr/lib/python3/dist-packages/pythran/tables.py:4563: FutureWarning: In the future `np.bytes` will be defined as the corresponding NumPy scalar. obj = getattr(themodule, elem) running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext running install_lib creating ../../../../debian/tmp/usr/lib creating ../../../../debian/tmp/usr/lib/python3 creating ../../../../debian/tmp/usr/lib/python3/dist-packages creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/bottleneck.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/alpha_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/euclidean_strong_witness_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/euclidean_witness_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/tangential_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/subsampling.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/nerve_gic.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/strong_witness_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/witness_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/reader_utils.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/periodic_cubical_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/cubical_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/rips_complex.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/simplex_tree.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/off_utils.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations copying build/lib.linux-x86_64-cpython-311/gudhi/representations/vector_methods.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations copying build/lib.linux-x86_64-cpython-311/gudhi/representations/preprocessing.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations copying build/lib.linux-x86_64-cpython-311/gudhi/representations/metrics.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations copying build/lib.linux-x86_64-cpython-311/gudhi/representations/kernel_methods.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations copying build/lib.linux-x86_64-cpython-311/gudhi/representations/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein copying build/lib.linux-x86_64-cpython-311/gudhi/wasserstein/wasserstein.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein copying build/lib.linux-x86_64-cpython-311/gudhi/wasserstein/barycenter.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein copying build/lib.linux-x86_64-cpython-311/gudhi/wasserstein/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow copying build/lib.linux-x86_64-cpython-311/gudhi/tensorflow/rips_layer.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow copying build/lib.linux-x86_64-cpython-311/gudhi/tensorflow/lower_star_simplex_tree_layer.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow copying build/lib.linux-x86_64-cpython-311/gudhi/tensorflow/cubical_layer.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow copying build/lib.linux-x86_64-cpython-311/gudhi/tensorflow/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud copying build/lib.linux-x86_64-cpython-311/gudhi/point_cloud/timedelay.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud copying build/lib.linux-x86_64-cpython-311/gudhi/point_cloud/knn.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud copying build/lib.linux-x86_64-cpython-311/gudhi/point_cloud/dtm.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud copying build/lib.linux-x86_64-cpython-311/gudhi/point_cloud/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/clustering copying build/lib.linux-x86_64-cpython-311/gudhi/clustering/_tomato.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/clustering copying build/lib.linux-x86_64-cpython-311/gudhi/clustering/tomato.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/clustering copying build/lib.linux-x86_64-cpython-311/gudhi/clustering/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/clustering creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/hera copying build/lib.linux-x86_64-cpython-311/gudhi/hera/bottleneck.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/hera copying build/lib.linux-x86_64-cpython-311/gudhi/hera/wasserstein.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/hera copying build/lib.linux-x86_64-cpython-311/gudhi/hera/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/hera creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/generators copying build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators/_points.cpython-311-x86_64-linux-gnu.so -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/generators copying build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators/points.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/generators copying build/lib.linux-x86_64-cpython-311/gudhi/datasets/generators/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/generators copying build/lib.linux-x86_64-cpython-311/gudhi/datasets/remote.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets copying build/lib.linux-x86_64-cpython-311/gudhi/datasets/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets creating ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/sklearn copying build/lib.linux-x86_64-cpython-311/gudhi/sklearn/cubical_persistence.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/sklearn copying build/lib.linux-x86_64-cpython-311/gudhi/sklearn/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/sklearn copying build/lib.linux-x86_64-cpython-311/gudhi/__init__.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/persistence_graphical_tools.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/weighted_rips_complex.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi copying build/lib.linux-x86_64-cpython-311/gudhi/dtm_rips_complex.py -> ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations/vector_methods.py to vector_methods.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations/preprocessing.py to preprocessing.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations/metrics.py to metrics.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations/kernel_methods.py to kernel_methods.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/representations/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein/wasserstein.py to wasserstein.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein/barycenter.py to barycenter.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/wasserstein/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow/rips_layer.py to rips_layer.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow/lower_star_simplex_tree_layer.py to lower_star_simplex_tree_layer.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow/cubical_layer.py to cubical_layer.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/tensorflow/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud/timedelay.py to timedelay.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud/knn.py to knn.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud/dtm.py to dtm.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/point_cloud/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/clustering/tomato.py to tomato.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/clustering/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/hera/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/generators/points.py to points.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/generators/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/remote.py to remote.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/datasets/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/sklearn/cubical_persistence.py to cubical_persistence.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/sklearn/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/__init__.py to __init__.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/persistence_graphical_tools.py to persistence_graphical_tools.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/weighted_rips_complex.py to weighted_rips_complex.cpython-311.pyc byte-compiling ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi/dtm_rips_complex.py to dtm_rips_complex.cpython-311.pyc running install_data copying ./introduction.rst -> ../../../../debian/tmp/usr/. running install_egg_info running egg_info creating gudhi.egg-info writing gudhi.egg-info/PKG-INFO writing dependency_links to gudhi.egg-info/dependency_links.txt writing requirements to gudhi.egg-info/requires.txt writing top-level names to gudhi.egg-info/top_level.txt writing manifest file 'gudhi.egg-info/SOURCES.txt' reading manifest file 'gudhi.egg-info/SOURCES.txt' writing manifest file 'gudhi.egg-info/SOURCES.txt' Copying gudhi.egg-info to ../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi-3.7.1.egg-info Skipping SOURCES.txt running install_scripts mv debian/tmp/usr/bin/Nerve \ debian/tmp/usr/bin/gudhi-nerve mv debian/tmp/usr/bin/VoronoiGIC \ debian/tmp/usr/bin/gudhi-voronoi-gic mv debian/tmp/usr/bin/Witness_complex_strong_witness_persistence \ debian/tmp/usr/bin/gudhi-witness-complex-strong-witness-persistence mv debian/tmp/usr/bin/Witness_complex_weak_witness_persistence \ debian/tmp/usr/bin/gudhi-witness-complex-weak-witness-persistence mv debian/tmp/usr/bin/alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-alpha-complex-3d-persistence mv debian/tmp/usr/bin/alpha_complex_persistence \ debian/tmp/usr/bin/gudhi-alpha-complex-persistence mv debian/tmp/usr/bin/bottleneck_distance \ debian/tmp/usr/bin/gudhi-bottleneck-distance mv debian/tmp/usr/bin/cech_persistence \ debian/tmp/usr/bin/gudhi-cech-persistence mv debian/tmp/usr/bin/cubical_complex_persistence \ debian/tmp/usr/bin/gudhi-cubical-complex-persistence mv debian/tmp/usr/bin/off_file_from_shape_generator \ debian/tmp/usr/bin/gudhi-off-file-from-shape-generator mv debian/tmp/usr/bin/periodic_cubical_complex_persistence \ debian/tmp/usr/bin/gudhi-periodic-cubical-complex-persistence mv debian/tmp/usr/bin/rips_correlation_matrix_persistence \ debian/tmp/usr/bin/gudhi-rips-correlation-matrix-persistence mv debian/tmp/usr/bin/rips_distance_matrix_persistence \ debian/tmp/usr/bin/gudhi-rips-distance-matrix-persistence mv debian/tmp/usr/bin/rips_persistence \ debian/tmp/usr/bin/gudhi-rips-persistence mv debian/tmp/usr/bin/sparse_rips_persistence \ debian/tmp/usr/bin/gudhi-sparse-rips-persistence mv debian/tmp/usr/bin/distance_matrix_edge_collapse_rips_persistence \ debian/tmp/usr/bin/gudhi-distance-matrix-edge-collapse-rips-persistence mv debian/tmp/usr/bin/point_cloud_edge_collapse_rips_persistence \ debian/tmp/usr/bin/gudhi-point-cloud-edge-collapse-rips-persistence mv debian/tmp/usr/bin/GudhUI debian/tmp/usr/bin/gudhui make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' find src -type f -path '*/example/*' \( -name '*.cpp' -o \( -name '*.txt' -a ! -iname 'cmake*' \) \) -exec sh -c 'name=$(echo $0 | sed s/src\\/// | sed s/example\\///); install -D -m 644 $0 debian/tmp/usr/share/doc/libgudhi-examples/$name' {} \; make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' debian/rules override_dh_install make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_install -X__pycache__ -X.pyc -X.pyo make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' dh_installdocs -O--buildsystem=cmake -O--no-parallel dh_installchangelogs -O--buildsystem=cmake -O--no-parallel dh_installman -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_python3 make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' for py3ver in 3.11 ; do \ dh_python3 -O--sourcedir=build-py$py3ver/userversion ; \ done make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' dh_installsystemduser -O--buildsystem=cmake -O--no-parallel dh_perl -O--buildsystem=cmake -O--no-parallel dh_link -O--buildsystem=cmake -O--no-parallel dh_strip_nondeterminism -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_compress make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_compress -X.cpp make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' dh_fixperms -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_missing make[1]: Entering directory '/build/gudhi-3.7.1+dfsg' dh_missing --list-missing dh_missing: warning: usr/bin/KeplerMapperVisuFromTxtFile.py exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/average_landscapes exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/average_landscapes_on_grid exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/average_persistence_heat_maps exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/average_persistence_vectors exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_birth_death_range_in_persistence_diagram exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_bottleneck_distance exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_distance_of_landscapes exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_distance_of_landscapes_on_grid exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_distance_of_persistence_heat_maps exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_distance_of_persistence_vectors exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_number_of_dominant_intervals exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_scalar_product_of_landscapes exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_scalar_product_of_landscapes_on_grid exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_scalar_product_of_persistence_heat_maps exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/compute_scalar_product_of_persistence_vectors exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_landscapes exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_landscapes_on_grid exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_p_h_m_weighted_by_arctan_of_their_persistence exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_p_h_m_weighted_by_distance_from_diagonal exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_p_h_m_weighted_by_squared_diag_distance exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_persistence_heat_maps exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_persistence_vectors exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/create_pssk exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/km.py exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/km.py.COPYRIGHT exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_histogram_of_intervals_lengths exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_landscapes exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_landscapes_on_grid exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_persistence_Betti_numbers exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_persistence_heat_map exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_persistence_intervals exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/plot_persistence_vectors exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Active_witness/Active_witness.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Active_witness/Active_witness_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Alpha_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Alpha_complex/Alpha_kernel_d.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Alpha_complex_3d.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Alpha_complex_options.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Bitmap_cubical_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Bitmap_cubical_complex/counter.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Bitmap_cubical_complex_base.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Bottleneck.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Cech_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Cech_complex_blocker.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Clock.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/Edge_profile.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Contraction_visitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Cost_policy.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Dummy_valid_contraction.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Edge_length_cost.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/First_vertex_placement.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Link_condition_valid_contraction.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Middle_placement.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Placement_policy.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Contraction/policies/Valid_contraction_policy.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Coxeter_triangulation.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Coxeter_triangulation/Cell_complex/Cell_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Coxeter_triangulation/Cell_complex/Hasse_diagram_cell.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Coxeter_triangulation/Query_result.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Debug_utils.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Edge_contraction.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Euclidean_strong_witness_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Euclidean_witness_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Flag_complex_edge_collapser.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Freudenthal_triangulation.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Cartesian_product.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Constant_function.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Embed_in_Rd.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_Sm_in_Rd.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_affine_plane_in_Rd.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_chair_in_R3.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_iron_in_R3.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_lemniscate_revolution_in_R3.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_moment_curve_in_Rd.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_torus_in_R3.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Function_whitney_umbrella_in_R3.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Linear_transformation.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Negation.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/PL_approximation.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/Translate.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Functions/random_orthogonal_matrix.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/GIC.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Graph_matching.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Hasse_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/IO/Mesh_medit.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/IO/build_mesh_from_cell_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/IO/output_debug_traces_to_html.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/IO/output_meshes_to_medit.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Implicit_manifold_intersection_oracle.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Internal_point.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Kd_tree_search.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Lazy_toplex_map.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Manifold_tracing.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Neighbors_finder.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Null_output_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Off_reader.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/PSSK.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Combination_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Integer_combination_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Ordered_set_partition_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Permutahedral_representation_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Permutation_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Set_partition_iterator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Simplex_comparator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/Size_range.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Permutahedral_representation/face_from_indices.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_graph.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_heat_maps.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_intervals.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_intervals_with_distances.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_landscape.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_landscape_on_grid.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistence_vectors.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistent_cohomology.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistent_cohomology/Field_Zp.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistent_cohomology/Multi_field.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Point.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Points_3D_off_io.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Points_off_io.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Rips_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Simple_object_pool.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Simplex_tree.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Simplex_tree/Simplex_tree_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Simplex_tree/Simplex_tree_siblings.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Simplex_tree/indexing_tag.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/internal/Top_faces.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/internal/Trie.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker_contractor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker_geometric_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker_link_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Skeleton_blocker_simplifiable_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Sliced_Wasserstein.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Sparse_rips_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Sphere_circumradius.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Strong_witness_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Tangential_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Tangential_complex/Simplicial_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Tangential_complex/config.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Tangential_complex/utilities.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Toplex_map.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Unitary_tests_utils.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Witness_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/Witness_complex/all_faces_in.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/allocator.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/choose_n_farthest_points.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/common_persistence_representations.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/console_color.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/distance_functions.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/graph_simplicial_complex.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/pick_n_random_points.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/random_point_generators.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/read_persistence_from_file.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/reader_utils.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/sparsify_point_set.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/gudhi/writing_persistence_to_file.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/introduction.rst exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/gudhi/GUDHIConfig.cmake exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/gudhi/GUDHIConfigVersion.cmake exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: gudhi-utils (17), gudhui (1), libgudhi-dev (1), libgudhi-doc (1757), libgudhi-examples (0), python3-gudhi (1) * dh_installdocs: gudhi-utils (0), gudhui (0), libgudhi-dev (1), libgudhi-doc (0), libgudhi-examples (19), python3-gudhi (0) * dh_installman: gudhi-utils (0), gudhui (1), libgudhi-dev (0), libgudhi-doc (0), libgudhi-examples (0), python3-gudhi (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Leaving directory '/build/gudhi-3.7.1+dfsg' dh_dwz -a -O--buildsystem=cmake -O--no-parallel dh_strip -a -O--buildsystem=cmake -O--no-parallel dh_makeshlibs -a -O--buildsystem=cmake -O--no-parallel dh_shlibdeps -a -O--buildsystem=cmake -O--no-parallel dh_installdeb -O--buildsystem=cmake -O--no-parallel dh_gencontrol -O--buildsystem=cmake -O--no-parallel dh_md5sums -O--buildsystem=cmake -O--no-parallel dh_builddeb -O--buildsystem=cmake -O--no-parallel dpkg-deb: building package 'libgudhi-dev' in '../libgudhi-dev_3.7.1+dfsg-1_all.deb'. dpkg-deb: building package 'libgudhi-examples' in '../libgudhi-examples_3.7.1+dfsg-1_all.deb'. dpkg-deb: building package 'libgudhi-doc' in '../libgudhi-doc_3.7.1+dfsg-1_all.deb'. dpkg-deb: building package 'python3-gudhi' in '../python3-gudhi_3.7.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-gudhi-dbgsym' in '../python3-gudhi-dbgsym_3.7.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'gudhui' in '../gudhui_3.7.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'gudhui-dbgsym' in '../gudhui-dbgsym_3.7.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'gudhi-utils' in '../gudhi-utils_3.7.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'gudhi-utils-dbgsym' in '../gudhi-utils-dbgsym_3.7.1+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../gudhi_3.7.1+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -O../gudhi_3.7.1+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/656416 and its subdirectories I: Current time: Sat May 18 22:01:03 -12 2024 I: pbuilder-time-stamp: 1716112863