I: pbuilder: network access will be disabled during build I: Current time: Wed Jun 19 09:10:42 -12 2024 I: pbuilder-time-stamp: 1718831442 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [avogadro_1.97.0-1.dsc] I: copying [./avogadro_1.97.0.orig.tar.gz] I: copying [./avogadro_1.97.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 28 20:11:30 2022 -12 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./avogadro_1.97.0-1.dsc: no acceptable signature found dpkg-source: info: extracting avogadro in avogadro-1.97.0 dpkg-source: info: unpacking avogadro_1.97.0.orig.tar.gz dpkg-source: info: unpacking avogadro_1.97.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying probe-X11-paths-with-find_package.patch dpkg-source: info: applying avogadro-i18n.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3816810/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3788f74eef4d4a298f87f0ff75210a12' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3816810' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.46uZlgQ5/pbuilderrc_mOtB --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.46uZlgQ5/b1 --logfile b1/build.log avogadro_1.97.0-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 6.1.0-0.deb11.6-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.15-1~bpo11+1 (2023-03-16) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash -rwxr-xr-x 1 root root 121904 Sep 20 2022 date -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd -rwxr-xr-x 1 root root 102200 Sep 20 2022 df -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 35664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln -rwxr-xr-x 1 root root 53024 Mar 23 2023 login -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 59712 Mar 22 2023 more -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 22 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3816810/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), doxygen, libavogadro-dev (>= 1.96~), libeigen3-dev (>> 3.3), libgl2ps-dev, libglew-dev, libhdf5-dev, libopenbabel-dev, libsymspg-dev, molequeue, libmolequeue-dev, pkg-config, qtbase5-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19596 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libavogadro-dev (>= 1.96~); however: Package libavogadro-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev (>> 3.3); however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgl2ps-dev; however: Package libgl2ps-dev is not installed. pbuilder-satisfydepends-dummy depends on libglew-dev; however: Package libglew-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libopenbabel-dev; however: Package libopenbabel-dev is not installed. pbuilder-satisfydepends-dummy depends on libsymspg-dev; however: Package libsymspg-dev is not installed. pbuilder-satisfydepends-dummy depends on molequeue; however: Package molequeue is not installed. pbuilder-satisfydepends-dummy depends on libmolequeue-dev; however: Package libmolequeue-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev; however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavogadro-dev{a} libavogadro2-1{a} libbrotli1{a} libbsd0{a} libcairo2{a} libclang-cpp14{a} libclang1-14{a} libcups2{a} libcurl4{a} libcurl4-openssl-dev{a} libdbus-1-3{a} libdebhelper-perl{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgbm1{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libgl2ps-dev{a} libgl2ps1.4{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglew-dev{a} libglew2.2{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libice6{a} libicu72{a} libinchi1{a} libinput-bin{a} libinput10{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp25{a} libldap-2.5-0{a} libllvm14{a} libllvm15{a} libmaeparser1{a} libmagic-mgc{a} libmagic1{a} libmd4c0{a} libmolequeue-dev{a} libmtdev1{a} libnghttp2-14{a} libopenbabel-dev{a} libopenbabel7{a} libopengl-dev{a} libopengl0{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16{a} libproc2-0{a} libpsl5{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqt5concurrent5{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5printsupport5{a} libqt5sql5{a} libqt5svg5{a} libqt5test5{a} libqt5widgets5{a} libqt5xml5{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsm6{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsymspg-dev{a} libsymspg1{a} libsz2{a} libtool{a} libuchardet0{a} libuv1{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxrender1{a} libxshmfence1{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} molequeue{a} openbabel{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3.11{a} python3.11-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} x11-common{a} x11proto-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus libarchive-cpio-perl libavogadro-data libglib2.0-data libldap-common libltdl-dev libmail-sendmail-perl libqt5opengl5-dev libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules lynx mesa-vulkan-drivers psmisc publicsuffix python3-cclib qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget xdg-user-dirs 0 packages upgraded, 226 newly installed, 0 to remove and 0 not upgraded. Need to get 220 MB of archives. After unpacking 1145 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get: 3 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get: 8 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get: 11 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get: 13 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get: 14 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 15 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get: 16 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get: 17 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get: 18 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get: 19 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 20 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get: 21 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get: 22 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get: 23 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get: 24 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get: 25 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get: 29 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get: 30 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get: 31 http://deb.debian.org/debian bookworm/main amd64 libarchive13 amd64 3.6.2-1 [343 kB] Get: 32 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get: 33 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get: 34 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get: 35 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get: 36 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB] Get: 37 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get: 38 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 39 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get: 40 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-9 [386 kB] Get: 41 http://deb.debian.org/debian bookworm/main amd64 libjsoncpp25 amd64 1.9.5-4 [78.6 kB] Get: 42 http://deb.debian.org/debian bookworm/main amd64 librhash0 amd64 1.4.3-3 [134 kB] Get: 43 http://deb.debian.org/debian bookworm/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get: 44 http://deb.debian.org/debian bookworm/main amd64 cmake-data all 3.25.1-1 [2026 kB] Get: 45 http://deb.debian.org/debian bookworm/main amd64 cmake amd64 3.25.1-1 [8692 kB] Get: 46 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 47 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get: 48 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get: 51 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 52 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 53 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get: 54 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get: 55 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get: 56 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 57 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 58 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get: 59 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get: 60 http://deb.debian.org/debian bookworm/main amd64 libedit2 amd64 3.1-20221030-2 [93.0 kB] Get: 61 http://deb.debian.org/debian bookworm/main amd64 libz3-4 amd64 4.8.12-3.1 [7216 kB] Get: 62 http://deb.debian.org/debian bookworm/main amd64 libllvm14 amd64 1:14.0.6-12 [21.8 MB] Get: 63 http://deb.debian.org/debian bookworm/main amd64 libclang-cpp14 amd64 1:14.0.6-12 [11.1 MB] Get: 64 http://deb.debian.org/debian bookworm/main amd64 libclang1-14 amd64 1:14.0.6-12 [6157 kB] Get: 65 http://deb.debian.org/debian bookworm/main amd64 doxygen amd64 1.9.4-4 [4611 kB] Get: 66 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get: 67 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5 [399 kB] Get: 68 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get: 69 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get: 70 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get: 71 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-4 [449 kB] Get: 72 http://deb.debian.org/debian bookworm/main amd64 hdf5-helpers amd64 1.10.8+repack1-1 [27.9 kB] Get: 73 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get: 74 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get: 75 http://deb.debian.org/debian bookworm/main amd64 libaec-dev amd64 1.0.6-1+b1 [19.9 kB] Get: 76 http://deb.debian.org/debian bookworm/main amd64 libavahi-common-data amd64 0.8-10 [107 kB] Get: 77 http://deb.debian.org/debian bookworm/main amd64 libavahi-common3 amd64 0.8-10 [41.6 kB] Get: 78 http://deb.debian.org/debian bookworm/main amd64 libdbus-1-3 amd64 1.14.6-1 [200 kB] Get: 79 http://deb.debian.org/debian bookworm/main amd64 libavahi-client3 amd64 0.8-10 [45.5 kB] Get: 80 http://deb.debian.org/debian bookworm/main amd64 libglvnd0 amd64 1.6.0-1 [51.8 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 83 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 84 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get: 85 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get: 86 http://deb.debian.org/debian bookworm/main amd64 libdrm-common all 2.4.114-1 [7112 B] Get: 87 http://deb.debian.org/debian bookworm/main amd64 libdrm2 amd64 2.4.114-1+b1 [37.5 kB] Get: 88 http://deb.debian.org/debian bookworm/main amd64 libglapi-mesa amd64 22.3.6-1+deb12u1 [35.7 kB] Get: 89 http://deb.debian.org/debian bookworm/main amd64 libx11-xcb1 amd64 2:1.8.4-2 [192 kB] Get: 90 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get: 91 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get: 92 http://deb.debian.org/debian bookworm/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get: 93 http://deb.debian.org/debian bookworm/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get: 94 http://deb.debian.org/debian bookworm/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get: 95 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get: 96 http://deb.debian.org/debian bookworm/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get: 97 http://deb.debian.org/debian bookworm/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get: 98 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 99 http://deb.debian.org/debian bookworm/main amd64 libxfixes3 amd64 1:6.0.0-2 [22.7 kB] Get: 100 http://deb.debian.org/debian bookworm/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get: 101 http://deb.debian.org/debian bookworm/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get: 102 http://deb.debian.org/debian bookworm/main amd64 libdrm-amdgpu1 amd64 2.4.114-1+b1 [20.9 kB] Get: 103 http://deb.debian.org/debian bookworm/main amd64 libpciaccess0 amd64 0.17-2 [51.4 kB] Get: 104 http://deb.debian.org/debian bookworm/main amd64 libdrm-intel1 amd64 2.4.114-1+b1 [64.0 kB] Get: 105 http://deb.debian.org/debian bookworm/main amd64 libdrm-nouveau2 amd64 2.4.114-1+b1 [19.1 kB] Get: 106 http://deb.debian.org/debian bookworm/main amd64 libdrm-radeon1 amd64 2.4.114-1+b1 [21.8 kB] Get: 107 http://deb.debian.org/debian bookworm/main amd64 libllvm15 amd64 1:15.0.6-4+b1 [23.1 MB] Get: 108 http://deb.debian.org/debian bookworm/main amd64 libsensors-config all 1:3.6.0-7.1 [14.3 kB] Get: 109 http://deb.debian.org/debian bookworm/main amd64 libsensors5 amd64 1:3.6.0-7.1 [34.2 kB] Get: 110 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dri amd64 22.3.6-1+deb12u1 [7239 kB] Get: 111 http://deb.debian.org/debian bookworm/main amd64 libglx-mesa0 amd64 22.3.6-1+deb12u1 [147 kB] Get: 112 http://deb.debian.org/debian bookworm/main amd64 libglx0 amd64 1.6.0-1 [34.4 kB] Get: 113 http://deb.debian.org/debian bookworm/main amd64 libgl1 amd64 1.6.0-1 [88.4 kB] Get: 114 http://deb.debian.org/debian bookworm/main amd64 libglew2.2 amd64 2.2.0-4+b1 [175 kB] Get: 115 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get: 116 http://deb.debian.org/debian bookworm/main amd64 libopengl0 amd64 1.6.0-1 [30.6 kB] Get: 117 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get: 118 http://deb.debian.org/debian bookworm/main amd64 shared-mime-info amd64 2.2-1 [729 kB] Get: 119 http://deb.debian.org/debian bookworm/main amd64 libdouble-conversion3 amd64 3.2.1-1 [41.5 kB] Get: 120 http://deb.debian.org/debian bookworm/main amd64 libpcre2-16-0 amd64 10.42-1 [245 kB] Get: 121 http://deb.debian.org/debian bookworm/main amd64 libqt5core5a amd64 5.15.8+dfsg-7 [1809 kB] Get: 122 http://deb.debian.org/debian bookworm/main amd64 libqt5concurrent5 amd64 5.15.8+dfsg-7 [41.9 kB] Get: 123 http://deb.debian.org/debian bookworm/main amd64 libwayland-server0 amd64 1.21.0-1 [35.9 kB] Get: 124 http://deb.debian.org/debian bookworm/main amd64 libgbm1 amd64 22.3.6-1+deb12u1 [38.0 kB] Get: 125 http://deb.debian.org/debian bookworm/main amd64 libwayland-client0 amd64 1.21.0-1 [28.3 kB] Get: 126 http://deb.debian.org/debian bookworm/main amd64 libegl-mesa0 amd64 22.3.6-1+deb12u1 [114 kB] Get: 127 http://deb.debian.org/debian bookworm/main amd64 libegl1 amd64 1.6.0-1 [33.7 kB] Get: 128 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 129 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get: 130 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 131 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 132 http://deb.debian.org/debian bookworm/main amd64 libevdev2 amd64 1.13.0+dfsg-1 [34.0 kB] Get: 133 http://deb.debian.org/debian bookworm/main amd64 libmtdev1 amd64 1.1.6-1 [23.0 kB] Get: 134 http://deb.debian.org/debian bookworm/main amd64 libgudev-1.0-0 amd64 237-2 [15.1 kB] Get: 135 http://deb.debian.org/debian bookworm/main amd64 libwacom-common all 2.6.0-1 [58.4 kB] Get: 136 http://deb.debian.org/debian bookworm/main amd64 libwacom9 amd64 2.6.0-1 [21.5 kB] Get: 137 http://deb.debian.org/debian bookworm/main amd64 libinput-bin amd64 1.22.1-1 [23.2 kB] Get: 138 http://deb.debian.org/debian bookworm/main amd64 libinput10 amd64 1.22.1-1 [125 kB] Get: 139 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get: 140 http://deb.debian.org/debian bookworm/main amd64 libmd4c0 amd64 0.4.8-1 [44.2 kB] Get: 141 http://deb.debian.org/debian bookworm/main amd64 libqt5dbus5 amd64 5.15.8+dfsg-7 [211 kB] Get: 142 http://deb.debian.org/debian bookworm/main amd64 libqt5network5 amd64 5.15.8+dfsg-7 [674 kB] Get: 143 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 144 http://deb.debian.org/debian bookworm/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get: 145 http://deb.debian.org/debian bookworm/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get: 146 http://deb.debian.org/debian bookworm/main amd64 libxcb-image0 amd64 0.4.0-2 [22.9 kB] Get: 147 http://deb.debian.org/debian bookworm/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get: 148 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get: 149 http://deb.debian.org/debian bookworm/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get: 150 http://deb.debian.org/debian bookworm/main amd64 libxcb-shape0 amd64 1.15-1 [106 kB] Get: 151 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinerama0 amd64 1.15-1 [105 kB] Get: 152 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinput0 amd64 1.15-1 [130 kB] Get: 153 http://deb.debian.org/debian bookworm/main amd64 libxcb-xkb1 amd64 1.15-1 [129 kB] Get: 154 http://deb.debian.org/debian bookworm/main amd64 xkb-data all 2.35.1-1 [764 kB] Get: 155 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon0 amd64 1.5.0-1 [106 kB] Get: 156 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon-x11-0 amd64 1.5.0-1 [15.6 kB] Get: 157 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 libqt5gui5 amd64 5.15.8+dfsg-7 [3407 kB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 libqt5widgets5 amd64 5.15.8+dfsg-7 [2379 kB] Get: 160 http://deb.debian.org/debian bookworm/main amd64 libqt5svg5 amd64 5.15.8-2 [134 kB] Get: 161 http://deb.debian.org/debian bookworm/main amd64 libsymspg1 amd64 2.0.2-1+b3 [188 kB] Get: 162 http://deb.debian.org/debian bookworm/main amd64 libavogadro2-1 amd64 1.97.0-3+b1 [1804 kB] Get: 163 http://deb.debian.org/debian bookworm/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get: 164 http://deb.debian.org/debian bookworm/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get: 165 http://deb.debian.org/debian bookworm/main amd64 pkgconf amd64 1.8.1-1 [25.9 kB] Get: 166 http://deb.debian.org/debian bookworm/main amd64 pkg-config amd64 1.8.1-1 [13.7 kB] Get: 167 http://deb.debian.org/debian bookworm/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 168 http://deb.debian.org/debian bookworm/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 169 http://deb.debian.org/debian bookworm/main amd64 x11proto-dev all 2022.1-1 [599 kB] Get: 170 http://deb.debian.org/debian bookworm/main amd64 libxau-dev amd64 1:1.0.9-1 [22.9 kB] Get: 171 http://deb.debian.org/debian bookworm/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get: 172 http://deb.debian.org/debian bookworm/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 173 http://deb.debian.org/debian bookworm/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get: 174 http://deb.debian.org/debian bookworm/main amd64 libxcb1-dev amd64 1.15-1 [181 kB] Get: 175 http://deb.debian.org/debian bookworm/main amd64 libx11-dev amd64 2:1.8.4-2 [836 kB] Get: 176 http://deb.debian.org/debian bookworm/main amd64 libglx-dev amd64 1.6.0-1 [15.3 kB] Get: 177 http://deb.debian.org/debian bookworm/main amd64 libgl-dev amd64 1.6.0-1 [100 kB] Get: 178 http://deb.debian.org/debian bookworm/main amd64 libglvnd-core-dev amd64 1.6.0-1 [12.9 kB] Get: 179 http://deb.debian.org/debian bookworm/main amd64 libegl-dev amd64 1.6.0-1 [19.1 kB] Get: 180 http://deb.debian.org/debian bookworm/main amd64 libgles1 amd64 1.6.0-1 [11.7 kB] Get: 181 http://deb.debian.org/debian bookworm/main amd64 libgles2 amd64 1.6.0-1 [16.8 kB] Get: 182 http://deb.debian.org/debian bookworm/main amd64 libgles-dev amd64 1.6.0-1 [50.4 kB] Get: 183 http://deb.debian.org/debian bookworm/main amd64 libopengl-dev amd64 1.6.0-1 [4936 B] Get: 184 http://deb.debian.org/debian bookworm/main amd64 libglvnd-dev amd64 1.6.0-1 [4692 B] Get: 185 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dev amd64 22.3.6-1+deb12u1 [14.5 kB] Get: 186 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa amd64 9.0.2-1.1 [178 kB] Get: 187 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1 [216 kB] Get: 188 http://deb.debian.org/debian bookworm/main amd64 libglew-dev amd64 2.2.0-4+b1 [256 kB] Get: 189 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get: 190 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get: 191 http://deb.debian.org/debian bookworm/main amd64 libinchi1 amd64 1.03+dfsg-4+b2 [436 kB] Get: 192 http://deb.debian.org/debian bookworm/main amd64 libmaeparser1 amd64 1.3.0-1 [88.9 kB] Get: 193 http://deb.debian.org/debian bookworm/main amd64 libopenbabel7 amd64 3.1.1+dfsg-9+b3 [3123 kB] Get: 194 http://deb.debian.org/debian bookworm/main amd64 openbabel amd64 3.1.1+dfsg-9+b3 [125 kB] Get: 195 http://deb.debian.org/debian bookworm/main amd64 libavogadro-dev amd64 1.97.0-3+b1 [52.3 MB] Get: 196 http://deb.debian.org/debian bookworm/main amd64 libcups2 amd64 2.4.2-3 [244 kB] Get: 197 http://deb.debian.org/debian bookworm/main amd64 libcurl4-openssl-dev amd64 7.88.1-9 [487 kB] Get: 198 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get: 199 http://deb.debian.org/debian bookworm/main amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-2 [41.3 kB] Get: 200 http://deb.debian.org/debian bookworm/main amd64 libgl2ps-dev amd64 1.4.2+dfsg1-2 [24.8 kB] Get: 201 http://deb.debian.org/debian bookworm/main amd64 libhdf5-cpp-103-1 amd64 1.10.8+repack1-1 [128 kB] Get: 202 http://deb.debian.org/debian bookworm/main amd64 libhdf5-fortran-102 amd64 1.10.8+repack1-1 [93.3 kB] Get: 203 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get: 204 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-fortran-100 amd64 1.10.8+repack1-1 [44.5 kB] Get: 205 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-cpp-100 amd64 1.10.8+repack1-1 [25.5 kB] Get: 206 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get: 207 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2 [290 kB] Get: 208 http://deb.debian.org/debian bookworm/main amd64 libjpeg-dev amd64 1:2.1.5-2 [71.8 kB] Get: 209 http://deb.debian.org/debian bookworm/main amd64 libssl-dev amd64 3.0.8-1 [2427 kB] Get: 210 http://deb.debian.org/debian bookworm/main amd64 libhdf5-dev amd64 1.10.8+repack1-1 [2615 kB] Get: 211 http://deb.debian.org/debian bookworm/main amd64 libmolequeue-dev amd64 0.9.0-1+b2 [69.4 kB] Get: 212 http://deb.debian.org/debian bookworm/main amd64 libopenbabel-dev amd64 3.1.1+dfsg-9+b3 [180 kB] Get: 213 http://deb.debian.org/debian bookworm/main amd64 libqt5printsupport5 amd64 5.15.8+dfsg-7 [202 kB] Get: 214 http://deb.debian.org/debian bookworm/main amd64 libqt5sql5 amd64 5.15.8+dfsg-7 [121 kB] Get: 215 http://deb.debian.org/debian bookworm/main amd64 libqt5test5 amd64 5.15.8+dfsg-7 [146 kB] Get: 216 http://deb.debian.org/debian bookworm/main amd64 libqt5xml5 amd64 5.15.8+dfsg-7 [121 kB] Get: 217 http://deb.debian.org/debian bookworm/main amd64 libsymspg-dev amd64 2.0.2-1+b3 [199 kB] Get: 218 http://deb.debian.org/debian bookworm/main amd64 libvulkan1 amd64 1.3.239.0-1 [116 kB] Get: 219 http://deb.debian.org/debian bookworm/main amd64 libvulkan-dev amd64 1.3.239.0-1 [1115 kB] Get: 220 http://deb.debian.org/debian bookworm/main amd64 libxext-dev amd64 2:1.3.4-1+b1 [107 kB] Get: 221 http://deb.debian.org/debian bookworm/main amd64 molequeue amd64 0.9.0-1+b2 [482 kB] Get: 222 http://deb.debian.org/debian bookworm/main amd64 qt5-qmake-bin amd64 5.15.8+dfsg-7 [1024 kB] Get: 223 http://deb.debian.org/debian bookworm/main amd64 qtchooser amd64 66-2 [26.3 kB] Get: 224 http://deb.debian.org/debian bookworm/main amd64 qt5-qmake amd64 5.15.8+dfsg-7 [221 kB] Get: 225 http://deb.debian.org/debian bookworm/main amd64 qtbase5-dev-tools amd64 5.15.8+dfsg-7 [757 kB] Get: 226 http://deb.debian.org/debian bookworm/main amd64 qtbase5-dev amd64 5.15.8+dfsg-7 [1121 kB] Fetched 220 MB in 7s (32.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. 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Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1) ... Setting up molequeue (0.9.0-1+b2) ... Setting up qtbase5-dev:amd64 (5.15.8+dfsg-7) ... Setting up libgles-dev:amd64 (1.6.0-1) ... Setting up libqt5svg5:amd64 (5.15.8-2) ... Setting up libglvnd-dev:amd64 (1.6.0-1) ... Setting up libavogadro2-1:amd64 (1.97.0-3+b1) ... Setting up libgl2ps-dev (1.4.2+dfsg1-2) ... Setting up libglew-dev:amd64 (2.2.0-4+b1) ... Setting up libavogadro-dev:amd64 (1.97.0-3+b1) ... Setting up libgl1-mesa-dev:amd64 (22.3.6-1+deb12u1) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/avogadro-1.97.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../avogadro_1.97.0-1_source.changes dpkg-buildpackage: info: source package avogadro dpkg-buildpackage: info: source version 1.97.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/avogadro-1.97.0' dh_clean conf.log conf.pri make[1]: Leaving directory '/build/avogadro-1.97.0' debian/rules build dh build dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/avogadro-1.97.0' dh_auto_configure -- \ -DCMAKE_SKIP_RPATH=TRUE \ -DAvogadro_ENABLE_RPC=ON \ -DBUILD_DOCUMENTATION=ON \ -DChemData_SOURCE_DIR=/build/avogadro-1.97.0 \ -DChemData_BINARY_DIR=/build/avogadro-1.97.0/obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_SKIP_RPATH=TRUE -DAvogadro_ENABLE_RPC=ON -DBUILD_DOCUMENTATION=ON -DChemData_SOURCE_DIR=/build/avogadro-1.97.0 -DChemData_BINARY_DIR=/build/avogadro-1.97.0/obj-x86_64-linux-gnu .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could not use git to determine source version, using version 1.97.0 -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.8") found components: C -- Found Doxygen: /usr/bin/doxygen (found version "1.9.4") found components: doxygen missing components: dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/avogadro-1.97.0/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/avogadro-1.97.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/avogadro-1.97.0' dh_auto_build cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/avogadro-1.97.0 -B/build/avogadro-1.97.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/avogadro-1.97.0/obj-x86_64-linux-gnu/CMakeFiles /build/avogadro-1.97.0/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make -f avogadro/CMakeFiles/avogadro_autogen.dir/build.make avogadro/CMakeFiles/avogadro_autogen.dir/depend make[4]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/avogadro-1.97.0 /build/avogadro-1.97.0/avogadro /build/avogadro-1.97.0/obj-x86_64-linux-gnu /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/CMakeFiles/avogadro_autogen.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make -f avogadro/CMakeFiles/avogadro_autogen.dir/build.make avogadro/CMakeFiles/avogadro_autogen.dir/build make[4]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' [ 6%] Automatic MOC for target avogadro cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/cmake -E cmake_autogen /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/CMakeFiles/avogadro_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -dM -E -c /usr/share/cmake-3.25/Modules/CMakeCXXCompilerABI.cpp -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu AutoGen: Parsing "SRC:/avogadro/aboutdialog.h" AutoGen: Parsing "SRC:/avogadro/application.h" AutoGen: Parsing "SRC:/avogadro/viewfactory.h" AutoGen: Parsing "SRC:/avogadro/tooltipfilter.h" AutoGen: Parsing "SRC:/avogadro/aboutdialog.cpp" AutoGen: Parsing "SRC:/avogadro/menubuilder.cpp" AutoGen: Parsing "SRC:/avogadro/rpclistener.h" AutoGen: Parsing "SRC:/avogadro/backgroundfileformat.h" AutoGen: Parsing "SRC:/avogadro/rpclistener.cpp" AutoGen: Parsing "SRC:/avogadro/application.cpp" AutoGen: Parsing "SRC:/avogadro/backgroundfileformat.cpp" AutoGen: Parsing "SRC:/avogadro/mainwindow.cpp" AutoGen: Parsing "SRC:/avogadro/menubuilder.h" AutoGen: Parsing "SRC:/avogadro/mainwindow.h" AutoGen: Parsing "SRC:/avogadro/tooltipfilter.cpp" AutoGen: Parsing "SRC:/avogadro/avogadro.cpp" AutoGen: Parsing "SRC:/avogadro/viewfactory.cpp" AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_aboutdialog.cpp", because it doesn't exist, from "SRC:/avogadro/aboutdialog.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_aboutdialog.cpp /build/avogadro-1.97.0/avogadro/aboutdialog.h AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_menubuilder.cpp", because it doesn't exist, from "SRC:/avogadro/menubuilder.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_menubuilder.cpp /build/avogadro-1.97.0/avogadro/menubuilder.h AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp", because it doesn't exist, from "SRC:/avogadro/backgroundfileformat.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp /build/avogadro-1.97.0/avogadro/backgroundfileformat.h AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_rpclistener.cpp", because it doesn't exist, from "SRC:/avogadro/rpclistener.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_rpclistener.cpp /build/avogadro-1.97.0/avogadro/rpclistener.h AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_mainwindow.cpp", because it doesn't exist, from "SRC:/avogadro/mainwindow.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_mainwindow.cpp /build/avogadro-1.97.0/avogadro/mainwindow.h AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_application.cpp", because it doesn't exist, from "SRC:/avogadro/application.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_application.cpp /build/avogadro-1.97.0/avogadro/application.h AutoMoc: Generating "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_tooltipfilter.cpp", because it doesn't exist, from "SRC:/avogadro/tooltipfilter.h" /usr/lib/qt5/bin/moc -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -I/usr/include/eigen3 -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -I/usr/include -I/usr/include/c++/12 -I/usr/include/x86_64-linux-gnu/c++/12 -I/usr/include/c++/12/backward -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu --include /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/moc_predefs.h --output-dep-file -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_tooltipfilter.cpp /build/avogadro-1.97.0/avogadro/tooltipfilter.h AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_tooltipfilter.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_menubuilder.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_rpclistener.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_application.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_aboutdialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/EWIEGA46WW/moc_mainwindow.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/obj-x86_64-linux-gnu/avogadro/CMakeFiles/avogadro_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-x86_64-linux-gnu/avogadro/CMakeFiles/avogadro_autogen.dir/AutogenUsed.txt" make[4]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' [ 6%] Built target avogadro_autogen make -f avogadro/CMakeFiles/avogadro.dir/build.make avogadro/CMakeFiles/avogadro.dir/depend make[4]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' [ 18%] Generating ui_mainwindow.h [ 18%] Generating qrc_avogadro.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/lib/qt5/bin/rcc --name avogadro --output /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/qrc_avogadro.cpp /build/avogadro-1.97.0/avogadro/avogadro.qrc cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/lib/qt5/bin/uic -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/ui_mainwindow.h /build/avogadro-1.97.0/avogadro/mainwindow.ui [ 25%] Generating ui_aboutdialog.h cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/lib/qt5/bin/uic -o /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/ui_aboutdialog.h /build/avogadro-1.97.0/avogadro/aboutdialog.ui cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/avogadro-1.97.0 /build/avogadro-1.97.0/avogadro /build/avogadro-1.97.0/obj-x86_64-linux-gnu /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/CMakeFiles/avogadro.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make -f avogadro/CMakeFiles/avogadro.dir/build.make avogadro/CMakeFiles/avogadro.dir/build make[4]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' [ 31%] Building CXX object avogadro/CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o [ 37%] Building CXX object avogadro/CMakeFiles/avogadro.dir/avogadro.cpp.o [ 43%] Building CXX object avogadro/CMakeFiles/avogadro.dir/aboutdialog.cpp.o [ 56%] Building CXX object avogadro/CMakeFiles/avogadro.dir/application.cpp.o [ 56%] Building CXX object avogadro/CMakeFiles/avogadro.dir/tooltipfilter.cpp.o [ 62%] Building CXX object avogadro/CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o -MF CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o -c /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/mocs_compilation.cpp [ 68%] Building CXX object avogadro/CMakeFiles/avogadro.dir/viewfactory.cpp.o [ 75%] Building CXX object avogadro/CMakeFiles/avogadro.dir/mainwindow.cpp.o [ 81%] Building CXX object avogadro/CMakeFiles/avogadro.dir/menubuilder.cpp.o cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/aboutdialog.cpp.o -MF CMakeFiles/avogadro.dir/aboutdialog.cpp.o.d -o CMakeFiles/avogadro.dir/aboutdialog.cpp.o -c /build/avogadro-1.97.0/avogadro/aboutdialog.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/application.cpp.o -MF CMakeFiles/avogadro.dir/application.cpp.o.d -o CMakeFiles/avogadro.dir/application.cpp.o -c /build/avogadro-1.97.0/avogadro/application.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/avogadro.cpp.o -MF CMakeFiles/avogadro.dir/avogadro.cpp.o.d -o CMakeFiles/avogadro.dir/avogadro.cpp.o -c /build/avogadro-1.97.0/avogadro/avogadro.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o -MF CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o.d -o CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o -c /build/avogadro-1.97.0/avogadro/backgroundfileformat.cpp [ 87%] Building CXX object avogadro/CMakeFiles/avogadro.dir/rpclistener.cpp.o cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/mainwindow.cpp.o -MF CMakeFiles/avogadro.dir/mainwindow.cpp.o.d -o CMakeFiles/avogadro.dir/mainwindow.cpp.o -c /build/avogadro-1.97.0/avogadro/mainwindow.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/menubuilder.cpp.o -MF CMakeFiles/avogadro.dir/menubuilder.cpp.o.d -o CMakeFiles/avogadro.dir/menubuilder.cpp.o -c /build/avogadro-1.97.0/avogadro/menubuilder.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/tooltipfilter.cpp.o -MF CMakeFiles/avogadro.dir/tooltipfilter.cpp.o.d -o CMakeFiles/avogadro.dir/tooltipfilter.cpp.o -c /build/avogadro-1.97.0/avogadro/tooltipfilter.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/viewfactory.cpp.o -MF CMakeFiles/avogadro.dir/viewfactory.cpp.o.d -o CMakeFiles/avogadro.dir/viewfactory.cpp.o -c /build/avogadro-1.97.0/avogadro/viewfactory.cpp [ 93%] Building CXX object avogadro/CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/rpclistener.cpp.o -MF CMakeFiles/avogadro.dir/rpclistener.cpp.o.d -o CMakeFiles/avogadro.dir/rpclistener.cpp.o -c /build/avogadro-1.97.0/avogadro/rpclistener.cpp cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/c++ -DAvogadro_ENABLE_RPC -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/avogadro_autogen/include -I/build/avogadro-1.97.0 -I/build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro -isystem /usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtConcurrent -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=c++17 -MD -MT avogadro/CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o -MF CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o.d -o CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o -c /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro/qrc_avogadro.cpp /build/avogadro-1.97.0/avogadro/menubuilder.cpp: In member function 'void Avogadro::MenuBuilder::buildMenu(QMenu*, const QString&)': /build/avogadro-1.97.0/avogadro/menubuilder.cpp:168:8: warning: 'void qSort(RandomAccessIterator, RandomAccessIterator, LessThan) [with RandomAccessIterator = QList::iterator; LessThan = bool (*)(const Avogadro::{anonymous}::PriorityText&, const Avogadro::{anonymous}::PriorityText&)]' is deprecated: Use std::sort [-Wdeprecated-declarations] 168 | qSort(actionText.begin(), actionText.end(), lessThan); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/x86_64-linux-gnu/qt5/QtCore/qmap.h:44, from /usr/include/x86_64-linux-gnu/qt5/QtCore/QMap:1, from /build/avogadro-1.97.0/avogadro/menubuilder.h:9, from /build/avogadro-1.97.0/avogadro/menubuilder.cpp:6: /usr/include/x86_64-linux-gnu/qt5/QtCore/qalgorithms.h:181:46: note: declared here 181 | QT_DEPRECATED_X("Use std::sort") inline void qSort(RandomAccessIterator start, RandomAccessIterator end, LessThan lessThan) | ^~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp: In member function 'void Avogadro::MainWindow::setupInterface()': /build/avogadro-1.97.0/avogadro/mainwindow.cpp:346:42: warning: 'QDockWidget::AllDockWidgetFeatures' is deprecated [-Wdeprecated-declarations] 346 | ~QDockWidget::AllDockWidgetFeatures); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDockWidget:1, from /build/avogadro-1.97.0/avogadro/mainwindow.cpp:63: /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdockwidget.h:82:9: note: declared here 82 | AllDockWidgetFeatures Q_DECL_ENUMERATOR_DEPRECATED = | ^~~~~~~~~~~~~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp:346:42: warning: 'QDockWidget::AllDockWidgetFeatures' is deprecated [-Wdeprecated-declarations] 346 | ~QDockWidget::AllDockWidgetFeatures); | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdockwidget.h:82:9: note: declared here 82 | AllDockWidgetFeatures Q_DECL_ENUMERATOR_DEPRECATED = | ^~~~~~~~~~~~~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp:358:41: warning: 'QDockWidget::AllDockWidgetFeatures' is deprecated [-Wdeprecated-declarations] 358 | ~QDockWidget::AllDockWidgetFeatures); | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdockwidget.h:82:9: note: declared here 82 | AllDockWidgetFeatures Q_DECL_ENUMERATOR_DEPRECATED = | ^~~~~~~~~~~~~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp:358:41: warning: 'QDockWidget::AllDockWidgetFeatures' is deprecated [-Wdeprecated-declarations] 358 | ~QDockWidget::AllDockWidgetFeatures); | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdockwidget.h:82:9: note: declared here 82 | AllDockWidgetFeatures Q_DECL_ENUMERATOR_DEPRECATED = | ^~~~~~~~~~~~~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp: In member function 'QImage Avogadro::MainWindow::renderToImage(const QSize&)': /build/avogadro-1.97.0/avogadro/mainwindow.cpp:1184:41: warning: 'static QPixmap QPixmap::grabWindow(WId, int, int, int, int)' is deprecated: Use QScreen::grabWindow() instead [-Wdeprecated-declarations] 1184 | QPixmap pixmap = QPixmap::grabWindow(glWidget->winId()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/x86_64-linux-gnu/qt5/QtGui/qpalette.h:46, from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qwidget.h:48, from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qmainwindow.h:44, from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QMainWindow:1, from /build/avogadro-1.97.0/avogadro/mainwindow.h:10, from /build/avogadro-1.97.0/avogadro/mainwindow.cpp:6: /usr/include/x86_64-linux-gnu/qt5/QtGui/qpixmap.h:118:20: note: declared here 118 | static QPixmap grabWindow(WId, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp: In member function 'QString Avogadro::MainWindow::generateFilterString(const std::vector&, bool)': /build/avogadro-1.97.0/avogadro/mainwindow.cpp:2009:28: warning: 'QList QMap::values(const Key&) const [with Key = QString; T = QString]' is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 2009 | if (!formatMap.values(name).contains(ext)) { | ~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/QMap:1, from /build/avogadro-1.97.0/avogadro/menubuilder.h:9, from /build/avogadro-1.97.0/avogadro/mainwindow.cpp:11: /usr/include/x86_64-linux-gnu/qt5/QtCore/qmap.h:1360:10: note: declared here 1360 | QList QMap::values(const Key &key) const | ^~~~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp:2010:30: warning: 'QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]' is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 2010 | formatMap.insertMulti(name, ext); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/x86_64-linux-gnu/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/qalgorithms.h:43, from /usr/include/x86_64-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/x86_64-linux-gnu/qt5/QtCore/qstringlist.h:41, from /usr/include/x86_64-linux-gnu/qt5/QtCore/QStringList:1, from /build/avogadro-1.97.0/avogadro/mainwindow.h:9: /build/avogadro-1.97.0/avogadro/mainwindow.cpp:2018:53: warning: 'QList QMap::uniqueKeys() const [with Key = QString; T = QString]' is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 2018 | foreach (const QString& desc, formatMap.uniqueKeys()) { | ~~~~~~~~~~~~~~~~~~~~^~ /usr/include/x86_64-linux-gnu/qt5/QtCore/qmap.h:1354:12: note: declared here 1354 | QList QMap::uniqueKeys() const | ^~~~~~~~~~~~ /build/avogadro-1.97.0/avogadro/mainwindow.cpp:2020:49: warning: 'QList QMap::values(const Key&) const [with Key = QString; T = QString]' is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 2020 | foreach (QString extension, formatMap.values(desc)) | ~~~~~~~~~~~~~~~~^~~~~~ /usr/include/x86_64-linux-gnu/qt5/QtCore/qmap.h:1360:10: note: declared here 1360 | QList QMap::values(const Key &key) const | ^~~~~~~~~~~~ [100%] Linking CXX executable ../bin/avogadro2 cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/avogadro && /usr/bin/cmake -E cmake_link_script CMakeFiles/avogadro.dir/link.txt --verbose=1 /usr/bin/c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/avogadro-1.97.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -rdynamic CMakeFiles/avogadro.dir/avogadro_autogen/mocs_compilation.cpp.o CMakeFiles/avogadro.dir/aboutdialog.cpp.o CMakeFiles/avogadro.dir/application.cpp.o CMakeFiles/avogadro.dir/avogadro.cpp.o CMakeFiles/avogadro.dir/backgroundfileformat.cpp.o CMakeFiles/avogadro.dir/mainwindow.cpp.o CMakeFiles/avogadro.dir/menubuilder.cpp.o CMakeFiles/avogadro.dir/tooltipfilter.cpp.o CMakeFiles/avogadro.dir/viewfactory.cpp.o CMakeFiles/avogadro.dir/rpclistener.cpp.o CMakeFiles/avogadro.dir/qrc_avogadro.cpp.o -o ../bin/avogadro2 /usr/lib/x86_64-linux-gnu/libQt5Concurrent.so.5.15.8 /usr/lib/x86_64-linux-gnu/libAvogadroQtOpenGL.so.1.97.0 /usr/lib/x86_64-linux-gnu/libAvogadroQtPlugins.so.1.97.0 /usr/lib/x86_64-linux-gnu/libMoleQueueServerCore.a /usr/lib/x86_64-linux-gnu/libMoleQueueClient.a /usr/lib/x86_64-linux-gnu/libAvogadroRendering.so.1.97.0 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libAvogadroQtGui.so.1.97.0 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.8 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.8 /usr/lib/x86_64-linux-gnu/libAvogadroIO.so.1.97.0 /usr/lib/x86_64-linux-gnu/libAvogadroCore.so.1.97.0 /usr/lib/x86_64-linux-gnu/libQt5Network.so.5.15.8 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.8 make[4]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' [100%] Built target avogadro make[3]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/avogadro-1.97.0/obj-x86_64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' cd obj-x86_64-linux-gnu; make documentation make[2]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/avogadro-1.97.0 -B/build/avogadro-1.97.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 documentation make[3]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/avogadro-1.97.0 -B/build/avogadro-1.97.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/avogadro-1.97.0/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 docs/CMakeFiles/documentation.dir/all make[4]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make -f docs/CMakeFiles/documentation.dir/build.make docs/CMakeFiles/documentation.dir/depend make[5]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/avogadro-1.97.0 /build/avogadro-1.97.0/docs /build/avogadro-1.97.0/obj-x86_64-linux-gnu /build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs /build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/CMakeFiles/documentation.dir/DependInfo.cmake --color= make[5]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make -f docs/CMakeFiles/documentation.dir/build.make docs/CMakeFiles/documentation.dir/build make[5]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs && /usr/bin/cmake -E remove_directory /build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/html cd /build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs && /usr/bin/doxygen /build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile warning: Tag 'SYMBOL_CACHE_SIZE' at line 290 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 490 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 757 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 843 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'USE_INLINE_TREES' at line 1028 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1161 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1253 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1259 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1420 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 1433 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1442 of file '/build/avogadro-1.97.0/obj-x86_64-linux-gnu/docs/doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. warning: source 'images' is not a readable file or directory... skipping. /build/avogadro-1.97.0/avogadro/aboutdialog.h:17: warning: Compound Avogadro::AboutDialog is not documented. /build/avogadro-1.97.0/avogadro/application.h:13: warning: Compound Avogadro::Application is not documented. /build/avogadro-1.97.0/avogadro/menubuilder.h:31: warning: Compound Avogadro::MenuBuilder is not documented. /build/avogadro-1.97.0/avogadro/viewfactory.h:13: warning: Compound Avogadro::ViewFactory is not documented. /build/avogadro-1.97.0/avogadro/tooltipfilter.h:9: warning: Compound ToolTipFilter is not documented. Doxygen version used: 1.9.4 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/avogadro-1.97.0/avogadro Searching for files in directory /build/avogadro-1.97.0/avogadro/lastinstall Searching for files in directory /build/avogadro-1.97.0/avogadro/icons Reading and parsing tag files Parsing files Preprocessing /build/avogadro-1.97.0/avogadro/aboutdialog.cpp... Parsing file /build/avogadro-1.97.0/avogadro/aboutdialog.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/aboutdialog.h... Parsing file /build/avogadro-1.97.0/avogadro/aboutdialog.h... Preprocessing /build/avogadro-1.97.0/avogadro/application.cpp... Parsing file /build/avogadro-1.97.0/avogadro/application.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/application.h... Parsing file /build/avogadro-1.97.0/avogadro/application.h... Preprocessing /build/avogadro-1.97.0/avogadro/avogadro.cpp... Parsing file /build/avogadro-1.97.0/avogadro/avogadro.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/backgroundfileformat.cpp... Parsing file /build/avogadro-1.97.0/avogadro/backgroundfileformat.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/backgroundfileformat.h... Parsing file /build/avogadro-1.97.0/avogadro/backgroundfileformat.h... Preprocessing /build/avogadro-1.97.0/avogadro/mainwindow.cpp... Parsing file /build/avogadro-1.97.0/avogadro/mainwindow.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/mainwindow.h... Parsing file /build/avogadro-1.97.0/avogadro/mainwindow.h... Preprocessing /build/avogadro-1.97.0/avogadro/menubuilder.cpp... Parsing file /build/avogadro-1.97.0/avogadro/menubuilder.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/menubuilder.h... Parsing file /build/avogadro-1.97.0/avogadro/menubuilder.h... Preprocessing /build/avogadro-1.97.0/avogadro/rpclistener.cpp... Parsing file /build/avogadro-1.97.0/avogadro/rpclistener.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/rpclistener.h... Parsing file /build/avogadro-1.97.0/avogadro/rpclistener.h... Preprocessing /build/avogadro-1.97.0/avogadro/tooltipfilter.cpp... Parsing file /build/avogadro-1.97.0/avogadro/tooltipfilter.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/tooltipfilter.h... Parsing file /build/avogadro-1.97.0/avogadro/tooltipfilter.h... Preprocessing /build/avogadro-1.97.0/avogadro/viewfactory.cpp... Parsing file /build/avogadro-1.97.0/avogadro/viewfactory.cpp... Preprocessing /build/avogadro-1.97.0/avogadro/viewfactory.h... Parsing file /build/avogadro-1.97.0/avogadro/viewfactory.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Distributing member group documentation. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xref/build/avogadro-1.97.0/avogadro/tooltipfilter.h:14: warning: Member ToolTipFilter(QObject *parent) (function) of class ToolTipFilter is not documented. /build/avogadro-1.97.0/avogadro/tooltipfilter.h:16: warning: Member eventFilter(QObject *object, QEvent *event) (function) of class ToolTipFilter is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.cpp:502: warning: Member setWidgetMolecule(T *glWidget, M *mol) (function) of namespace Avogadro is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.cpp:509: warning: Member setDefaultViews(MultiViewWidget *viewWidget) (function) of namespace Avogadro is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.cpp:1055: warning: Member populatePluginModel(ScenePluginModel &model, bool editOnly=false) (function) of namespace Avogadro is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.cpp:1080: warning: Member populateTools(T *glWidget) (function) of namespace Avogadro is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.cpp:1906: warning: Member ToolSort(const ToolPlugin *a, const ToolPlugin *b) (function) of namespace Avogadro is not documented. /build/avogadro-1.97.0/avogadro/aboutdialog.h:21: warning: Member AboutDialog(QWidget *Parent) (function) of class Avogadro::AboutDialog is not documented. /build/avogadro-1.97.0/avogadro/application.h:18: warning: Member Application(int &argc, char **argv) (function) of class Avogadro::Application is not documented. /build/avogadro-1.97.0/avogadro/application.h:19: warning: Member loadFile(const QString &fileName) (function) of class Avogadro::Application is not documented. /build/avogadro-1.97.0/avogadro/application.h:22: warning: Member event(QEvent *event) (function) of class Avogadro::Application is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:65: warning: Member setMolecule(Avogadro::QtGui::Molecule *molecule) (slot) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:61: warning: Member MainWindow(const QStringList &fileNames, bool disableSettings=false) (function) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:98: warning: Member molecule() (function) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:230: warning: Member undoEdit() (slot) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:231: warning: Member redoEdit() (slot) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:232: warning: Member activeMoleculeEdited() (slot) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:233: warning: Member refreshDisplayTypes() (slot) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:128: warning: Member closeEvent(QCloseEvent *event) (function) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:131: warning: Member dragEnterEvent(QDragEnterEvent *event) (function) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/mainwindow.h:132: warning: Member dropEvent(QDropEvent *event) (function) of class Avogadro::MainWindow is not documented. /build/avogadro-1.97.0/avogadro/menubuilder.h:51: warning: argument 'menu' of command @param is not found in the argument list of MenuBuilder::buildMenuBar(QMenuBar *menuBar) /build/avogadro-1.97.0/avogadro/menubuilder.h:51: warning: The following parameter of Avogadro::MenuBuilder::buildMenuBar(QMenuBar *menuBar) is not documented: parameter 'menuBar' /build/avogadro-1.97.0/avogadro/rpclistener.h:38: warning: Member RpcListener(QObject *parent=0) (function) of class Avogadro::RpcListener is not documented. /build/avogadro-1.97.0/avogadro/rpclistener.h:41: warning: Member start() (function) of class Avogadro::RpcListener is not documented. /build/avogadro-1.97.0/avogadro/viewfactory.h:19: warning: Member views() const (function) of class Avogadro::ViewFactory is not documented. /build/avogadro-1.97.0/avogadro/viewfactory.h:20: warning: Member createView(const QString &view) (function) of class Avogadro::ViewFactory is not documented. items... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound ToolTipFilter... Generating concept documentation... Generating namespace index... Generating docs for namespace Avogadro Generating docs for compound Avogadro::AboutDialog... Generating docs for compound Avogadro::Application... Generating docs for compound Avogadro::BackgroundFileFormat... Generating docs for compound Avogadro::MainWindow... Generating docs for compound Avogadro::MenuBuilder... Generating docs for compound Avogadro::RpcListener... Generating docs for compound Avogadro::ViewFactory... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... lookup cache used 181/65536 hits=785 misses=366 finished... make[5]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' Built target documentation make[4]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/avogadro-1.97.0/obj-x86_64-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make[2]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/avogadro-1.97.0' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/avogadro-1.97.0' dh_auto_install --destdir=debian/tmp cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/avogadro-1.97.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/avogadro-1.97.0 -B/build/avogadro-1.97.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/doc/AvogadroApp/avogadro2/README.md -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/doc/AvogadroApp/avogadro2/CONTRIBUTING.md -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/doc/AvogadroApp/avogadro2/LICENSE -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadroapp-zh_TW.qm -- Installing: 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/build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-it.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-id.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-hu.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-hr.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-hi.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-he.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-gl.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-fr_CA.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-fr.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-fi.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-fa.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-eu.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-et.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-es.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-eo.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-en_GB.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-en_CA.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-en_AU.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-el.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-de.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-da.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-cs.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-ca@valencia.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-ca.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-bs.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-bg.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-ar.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/avogadro2/i18n/avogadrolibs-af.qm -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/applications/avogadro2.desktop -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/metainfo/avogadro2.appdata.xml -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/share/pixmaps/avogadro2.png -- Installing: /build/avogadro-1.97.0/debian/tmp/usr/bin/avogadro2 make[2]: Leaving directory '/build/avogadro-1.97.0/obj-x86_64-linux-gnu' cp -r obj-x86_64-linux-gnu/docs/html debian/tmp make[1]: Leaving directory '/build/avogadro-1.97.0' dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'avogadro' in '../avogadro_1.97.0-1_amd64.deb'. dpkg-deb: building package 'avogadro-dbgsym' in '../avogadro-dbgsym_1.97.0-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../avogadro_1.97.0-1_amd64.buildinfo dpkg-genchanges --build=binary -O../avogadro_1.97.0-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3816810 and its subdirectories I: Current time: Wed Jun 19 09:12:33 -12 2024 I: pbuilder-time-stamp: 1718831553