Diff of the two buildlogs: -- --- b1/build.log 2024-10-25 06:06:41.066168913 +0000 +++ b2/build.log 2024-10-25 06:07:18.884829515 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Oct 24 18:05:46 -12 2024 -I: pbuilder-time-stamp: 1729836346 +I: Current time: Fri Nov 28 02:29:42 +14 2025 +I: pbuilder-time-stamp: 1764246582 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -29,54 +29,86 @@ dpkg-source: info: applying port-to-pytest.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/38101/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/D01_modify_environment starting +debug: Running on ionos16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 27 12:29 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='c988eca30b6045b688a27ee7f1a88bf5' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='38101' - PS1='# ' - PS2='> ' + INVOCATION_ID=8ae6e744b189465585463d149991b52e + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=112688 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rbMNhj6a/pbuilderrc_9yJI --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rbMNhj6a/b1 --logfile b1/build.log python-geneimpacts_0.3.7-4.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rbMNhj6a/pbuilderrc_og9R --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rbMNhj6a/b2 --logfile b2/build.log python-geneimpacts_0.3.7-4.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos12-i386 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/38101/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -188,7 +220,7 @@ Get: 66 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.1-1 [45.8 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 python3-pytest all 8.3.3-1 [249 kB] -Fetched 28.9 MB in 1s (38.5 MB/s) +Fetched 28.9 MB in 0s (89.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19933 files and directories currently installed.) @@ -426,8 +458,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri Oct 25 06:06:17 UTC 2024. -Universal Time is now: Fri Oct 25 06:06:17 UTC 2024. +Local time is now: Thu Nov 27 12:30:03 UTC 2025. +Universal Time is now: Thu Nov 27 12:30:03 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -489,7 +521,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-geneimpacts-0.3.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-geneimpacts_0.3.7-4_source.changes +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-geneimpacts-0.3.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-geneimpacts_0.3.7-4_source.changes dpkg-buildpackage: info: source package python-geneimpacts dpkg-buildpackage: info: source version 0.3.7-4 dpkg-buildpackage: info: source distribution unstable @@ -548,8 +584,8 @@ running build running build_py creating /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts -copying geneimpacts/__init__.py -> /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts copying geneimpacts/effect.py -> /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts +copying geneimpacts/__init__.py -> /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts creating /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests copying geneimpacts/tests/test_impacts.py -> /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests copying geneimpacts/tests/__init__.py -> /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests @@ -583,8 +619,8 @@ def __init__(self, effect_string, keys=None, _patt=re.compile("\||\("), -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -======================== 24 passed, 1 warning in 0.29s ========================= - rm -fr -- /tmp/dh-xdg-rundir-1Nh0k0ae +======================== 24 passed, 1 warning in 0.13s ========================= + rm -fr -- /tmp/dh-xdg-rundir-hFDsMwPR create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -625,25 +661,25 @@ running install_lib creating /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages creating /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/effect.py -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/__init__.py -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts +creating /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__pycache__ +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__pycache__ +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/__pycache__/effect.cpython-312.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__pycache__ creating /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/vep-csqs.txt.gz -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/bcfts.txt.gz -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/test_impacts.py -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/snpeff-anns.txt.gz -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/__init__.py -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests creating /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/__pycache__ -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/__pycache__/test_impacts.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/__pycache__ copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/__pycache__ -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/__init__.py -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts -creating /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__pycache__ -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__pycache__ -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/__pycache__/effect.cpython-312.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__pycache__ -copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/effect.py -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts -byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/test_impacts.py to test_impacts.cpython-312.pyc -byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/__init__.py to __init__.cpython-312.pyc -byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__init__.py to __init__.cpython-312.pyc +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/__pycache__/test_impacts.cpython-312-pytest-8.3.3.pyc -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/__pycache__ +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/vep-csqs.txt.gz -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests +copying /build/reproducible-path/python-geneimpacts-0.3.7/.pybuild/cpython3_3.12_geneimpacts/build/geneimpacts/tests/snpeff-anns.txt.gz -> /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/effect.py to effect.cpython-312.pyc /usr/lib/python3.12/dist-packages/geneimpacts/effect.py:603: SyntaxWarning: invalid escape sequence '\|' +byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/test_impacts.py to test_impacts.cpython-312.pyc +byte-compiling /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts/tests/__init__.py to __init__.cpython-312.pyc running install_egg_info Copying geneimpacts.egg-info to /build/reproducible-path/python-geneimpacts-0.3.7/debian/python3-geneimpacts/usr/lib/python3.12/dist-packages/geneimpacts-0.3.7.egg-info Skipping SOURCES.txt @@ -671,9 +707,9 @@ dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1639832301 as canonical time + Normalizing debian/python3-geneimpacts/usr/lib/python3/dist-packages/geneimpacts/tests/snpeff-anns.txt.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-geneimpacts/usr/lib/python3/dist-packages/geneimpacts/tests/vep-csqs.txt.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-geneimpacts/usr/lib/python3/dist-packages/geneimpacts/tests/bcfts.txt.gz using File::StripNondeterminism::handlers::gzip - Normalizing debian/python3-geneimpacts/usr/lib/python3/dist-packages/geneimpacts/tests/snpeff-anns.txt.gz using File::StripNondeterminism::handlers::gzip dh_compress -O--buildsystem=pybuild cd debian/python3-geneimpacts chmod a-x usr/share/doc/python3-geneimpacts/changelog usr/share/doc/python3-geneimpacts/changelog.Debian @@ -715,12 +751,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/112688/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/38101 and its subdirectories -I: Current time: Thu Oct 24 18:06:40 -12 2024 -I: pbuilder-time-stamp: 1729836400 +I: removing directory /srv/workspace/pbuilder/112688 and its subdirectories +I: Current time: Fri Nov 28 02:30:16 +14 2025 +I: pbuilder-time-stamp: 1764246616