Diff of the two buildlogs:
--
--- b1/build.log 2025-02-12 16:13:56.483961433 +0000
+++ b2/build.log 2025-02-12 16:52:05.804694570 +0000
@@ -1,6 +1,6 @@
I: pbuilder: network access will be disabled during build
-I: Current time: Wed Feb 12 03:34:12 -12 2025
-I: pbuilder-time-stamp: 1739374452
+I: Current time: Thu Feb 13 06:14:24 +14 2025
+I: pbuilder-time-stamp: 1739376864
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
@@ -48,52 +48,84 @@
dpkg-source: info: applying graphviz_compat.patch
I: Not using root during the build.
I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/23809/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/D01_modify_environment starting
+debug: Running on virt32z.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Feb 12 16:14 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/D02_print_environment starting
I: set
- BUILDDIR='/build/reproducible-path'
- BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
- BUILDUSERNAME='pbuilder1'
- BUILD_ARCH='armhf'
- DEBIAN_FRONTEND='noninteractive'
- DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 '
- DISTRIBUTION='unstable'
- HOME='/root'
- HOST_ARCH='armhf'
+ BASH=/bin/sh
+ BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+ BASH_ALIASES=()
+ BASH_ARGC=()
+ BASH_ARGV=()
+ BASH_CMDS=()
+ BASH_LINENO=([0]="12" [1]="0")
+ BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+ BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+ BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf")
+ BASH_VERSION='5.2.37(1)-release'
+ BUILDDIR=/build/reproducible-path
+ BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+ BUILDUSERNAME=pbuilder2
+ BUILD_ARCH=armhf
+ DEBIAN_FRONTEND=noninteractive
+ DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 '
+ DIRSTACK=()
+ DISTRIBUTION=unstable
+ EUID=0
+ FUNCNAME=([0]="Echo" [1]="main")
+ GROUPS=()
+ HOME=/root
+ HOSTNAME=i-capture-the-hostname
+ HOSTTYPE=arm
+ HOST_ARCH=armhf
IFS='
'
- INVOCATION_ID='d5f3048ab9e5478da72a23269158bae3'
- LANG='C'
- LANGUAGE='en_US:en'
- LC_ALL='C'
- MAIL='/var/mail/root'
- OPTIND='1'
- PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
- PBCURRENTCOMMANDLINEOPERATION='build'
- PBUILDER_OPERATION='build'
- PBUILDER_PKGDATADIR='/usr/share/pbuilder'
- PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
- PBUILDER_SYSCONFDIR='/etc'
- PPID='23809'
- PS1='# '
- PS2='> '
+ INVOCATION_ID=87dbba577b2642c4a9bbfb43e93555e9
+ LANG=C
+ LANGUAGE=it_CH:it
+ LC_ALL=C
+ MACHTYPE=arm-unknown-linux-gnueabihf
+ MAIL=/var/mail/root
+ OPTERR=1
+ OPTIND=1
+ OSTYPE=linux-gnueabihf
+ PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+ PBCURRENTCOMMANDLINEOPERATION=build
+ PBUILDER_OPERATION=build
+ PBUILDER_PKGDATADIR=/usr/share/pbuilder
+ PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+ PBUILDER_SYSCONFDIR=/etc
+ PIPESTATUS=([0]="0")
+ POSIXLY_CORRECT=y
+ PPID=28015
PS4='+ '
- PWD='/'
- SHELL='/bin/bash'
- SHLVL='2'
- SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SXCAzgMK/pbuilderrc_PsvT --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SXCAzgMK/b1 --logfile b1/build.log snakemake_7.32.4-7.dsc'
- SUDO_GID='113'
- SUDO_UID='107'
- SUDO_USER='jenkins'
- TERM='unknown'
- TZ='/usr/share/zoneinfo/Etc/GMT+12'
- USER='root'
- _='/usr/bin/systemd-run'
- http_proxy='http://10.0.0.15:3142/'
+ PWD=/
+ SHELL=/bin/bash
+ SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+ SHLVL=3
+ SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SXCAzgMK/pbuilderrc_izGe --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SXCAzgMK/b2 --logfile b2/build.log snakemake_7.32.4-7.dsc'
+ SUDO_GID=110
+ SUDO_UID=103
+ SUDO_USER=jenkins
+ TERM=unknown
+ TZ=/usr/share/zoneinfo/Etc/GMT-14
+ UID=0
+ USER=root
+ _='I: set'
+ http_proxy=http://10.0.0.15:3142/
I: uname -a
- Linux virt64b 6.1.0-31-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux
+ Linux i-capture-the-hostname 6.1.0-31-armmp-lpae #1 SMP Debian 6.1.128-1 (2025-02-07) armv7l GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/23809/tmp/hooks/D02_print_environment finished
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
@@ -640,7 +672,7 @@
Get: 407 http://deb.debian.org/debian unstable/main armhf r-cran-shiny all 1.10.0+dfsg-1 [3139 kB]
Get: 408 http://deb.debian.org/debian unstable/main armhf r-cran-rmarkdown all 2.29+dfsg-1 [1473 kB]
Get: 409 http://deb.debian.org/debian unstable/main armhf stress armhf 1.0.7-1 [22.8 kB]
-Fetched 240 MB in 16s (15.0 MB/s)
+Fetched 240 MB in 59s (4043 kB/s)
Preconfiguring packages ...
Selecting previously unselected package fonts-lato.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19532 files and directories currently installed.)
@@ -1947,8 +1979,8 @@
Setting up tzdata (2025a-2) ...
Current default time zone: 'Etc/UTC'
-Local time is now: Wed Feb 12 15:39:16 UTC 2025.
-Universal Time is now: Wed Feb 12 15:39:16 UTC 2025.
+Local time is now: Wed Feb 12 16:19:55 UTC 2025.
+Universal Time is now: Wed Feb 12 16:19:55 UTC 2025.
Run 'dpkg-reconfigure tzdata' if you wish to change it.
Setting up liberror-perl (0.17029-2) ...
@@ -2356,7 +2388,11 @@
Building tag database...
-> Finished parsing the build-deps
I: Building the package
-I: Running cd /build/reproducible-path/snakemake-7.32.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snakemake_7.32.4-7_source.changes
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for unstable
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/snakemake-7.32.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../snakemake_7.32.4-7_source.changes
dpkg-buildpackage: info: source package snakemake
dpkg-buildpackage: info: source version 7.32.4-7
dpkg-buildpackage: info: source distribution unstable
@@ -2386,142 +2422,142 @@
running build
running build_py
creating build/lib/snakemake
-copying snakemake/sourcecache.py -> build/lib/snakemake
-copying snakemake/gui.py -> build/lib/snakemake
-copying snakemake/_version.py -> build/lib/snakemake
+copying snakemake/modules.py -> build/lib/snakemake
+copying snakemake/__main__.py -> build/lib/snakemake
+copying snakemake/script.py -> build/lib/snakemake
+copying snakemake/utils.py -> build/lib/snakemake
+copying snakemake/jobs.py -> build/lib/snakemake
+copying snakemake/cwl.py -> build/lib/snakemake
copying snakemake/logging.py -> build/lib/snakemake
copying snakemake/parser.py -> build/lib/snakemake
-copying snakemake/profiles.py -> build/lib/snakemake
-copying snakemake/script.py -> build/lib/snakemake
-copying snakemake/target_jobs.py -> build/lib/snakemake
+copying snakemake/wrapper.py -> build/lib/snakemake
+copying snakemake/rules.py -> build/lib/snakemake
+copying snakemake/resources.py -> build/lib/snakemake
+copying snakemake/interfaces.py -> build/lib/snakemake
copying snakemake/benchmark.py -> build/lib/snakemake
+copying snakemake/gui.py -> build/lib/snakemake
copying snakemake/decorators.py -> build/lib/snakemake
-copying snakemake/ruleinfo.py -> build/lib/snakemake
copying snakemake/stats.py -> build/lib/snakemake
+copying snakemake/ruleinfo.py -> build/lib/snakemake
+copying snakemake/output_index.py -> build/lib/snakemake
+copying snakemake/profiles.py -> build/lib/snakemake
+copying snakemake/persistence.py -> build/lib/snakemake
copying snakemake/shell.py -> build/lib/snakemake
+copying snakemake/_version.py -> build/lib/snakemake
copying snakemake/scheduler.py -> build/lib/snakemake
-copying snakemake/output_index.py -> build/lib/snakemake
-copying snakemake/cwl.py -> build/lib/snakemake
-copying snakemake/rules.py -> build/lib/snakemake
-copying snakemake/utils.py -> build/lib/snakemake
-copying snakemake/path_modifier.py -> build/lib/snakemake
-copying snakemake/checkpoints.py -> build/lib/snakemake
-copying snakemake/interfaces.py -> build/lib/snakemake
+copying snakemake/notebook.py -> build/lib/snakemake
copying snakemake/io.py -> build/lib/snakemake
-copying snakemake/persistence.py -> build/lib/snakemake
-copying snakemake/modules.py -> build/lib/snakemake
-copying snakemake/__main__.py -> build/lib/snakemake
-copying snakemake/resources.py -> build/lib/snakemake
-copying snakemake/__init__.py -> build/lib/snakemake
-copying snakemake/jobs.py -> build/lib/snakemake
-copying snakemake/workflow.py -> build/lib/snakemake
-copying snakemake/wrapper.py -> build/lib/snakemake
copying snakemake/dag.py -> build/lib/snakemake
-copying snakemake/notebook.py -> build/lib/snakemake
+copying snakemake/path_modifier.py -> build/lib/snakemake
+copying snakemake/__init__.py -> build/lib/snakemake
+copying snakemake/checkpoints.py -> build/lib/snakemake
copying snakemake/exceptions.py -> build/lib/snakemake
+copying snakemake/sourcecache.py -> build/lib/snakemake
+copying snakemake/target_jobs.py -> build/lib/snakemake
+copying snakemake/workflow.py -> build/lib/snakemake
+creating build/lib/snakemake/template_rendering
+copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering
+copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering
+copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering
+creating build/lib/snakemake/report
+copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report
+copying snakemake/report/__init__.py -> build/lib/snakemake/report
+creating build/lib/snakemake/unit_tests
+copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests
creating build/lib/snakemake/executors
-copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors
-copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors
copying snakemake/executors/common.py -> build/lib/snakemake/executors
+copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors
copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors
+copying snakemake/executors/flux.py -> build/lib/snakemake/executors
copying snakemake/executors/__init__.py -> build/lib/snakemake/executors
copying snakemake/executors/azure_batch.py -> build/lib/snakemake/executors
-copying snakemake/executors/flux.py -> build/lib/snakemake/executors
+copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors
+creating build/lib/snakemake/caching
+copying snakemake/caching/remote.py -> build/lib/snakemake/caching
+copying snakemake/caching/hash.py -> build/lib/snakemake/caching
+copying snakemake/caching/local.py -> build/lib/snakemake/caching
+copying snakemake/caching/__init__.py -> build/lib/snakemake/caching
+creating build/lib/snakemake/linting
+copying snakemake/linting/rules.py -> build/lib/snakemake/linting
+copying snakemake/linting/__init__.py -> build/lib/snakemake/linting
+copying snakemake/linting/links.py -> build/lib/snakemake/linting
+copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting
creating build/lib/snakemake/common
copying snakemake/common/tbdstring.py -> build/lib/snakemake/common
copying snakemake/common/__init__.py -> build/lib/snakemake/common
-creating build/lib/snakemake/template_rendering
-copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering
-copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering
-copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering
+creating build/lib/snakemake/deployment
+copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment
+copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment
+copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment
+copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment
+copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment
creating build/lib/snakemake/remote
-copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote
-copying snakemake/remote/EGA.py -> build/lib/snakemake/remote
+copying snakemake/remote/S3.py -> build/lib/snakemake/remote
+copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote
+copying snakemake/remote/gfal.py -> build/lib/snakemake/remote
+copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote
+copying snakemake/remote/webdav.py -> build/lib/snakemake/remote
+copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote
+copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote
+copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote
copying snakemake/remote/FTP.py -> build/lib/snakemake/remote
+copying snakemake/remote/EGA.py -> build/lib/snakemake/remote
copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote
-copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote
copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote
-copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote
-copying snakemake/remote/__init__.py -> build/lib/snakemake/remote
copying snakemake/remote/GS.py -> build/lib/snakemake/remote
-copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote
-copying snakemake/remote/gfal.py -> build/lib/snakemake/remote
-copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote
copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote
+copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote
+copying snakemake/remote/__init__.py -> build/lib/snakemake/remote
copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote
-copying snakemake/remote/S3.py -> build/lib/snakemake/remote
-copying snakemake/remote/webdav.py -> build/lib/snakemake/remote
-copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote
-creating build/lib/snakemake/linting
-copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting
-copying snakemake/linting/rules.py -> build/lib/snakemake/linting
-copying snakemake/linting/links.py -> build/lib/snakemake/linting
-copying snakemake/linting/__init__.py -> build/lib/snakemake/linting
-creating build/lib/snakemake/deployment
-copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment
-copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment
-copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment
-copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment
-copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment
-creating build/lib/snakemake/unit_tests
-copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests
-creating build/lib/snakemake/caching
-copying snakemake/caching/local.py -> build/lib/snakemake/caching
-copying snakemake/caching/hash.py -> build/lib/snakemake/caching
-copying snakemake/caching/__init__.py -> build/lib/snakemake/caching
-copying snakemake/caching/remote.py -> build/lib/snakemake/caching
-creating build/lib/snakemake/report
-copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report
-copying snakemake/report/__init__.py -> build/lib/snakemake/report
-creating build/lib/snakemake/executors/slurm
-copying snakemake/executors/slurm/slurm_submit.py -> build/lib/snakemake/executors/slurm
-copying snakemake/executors/slurm/slurm_jobstep.py -> build/lib/snakemake/executors/slurm
-copying snakemake/executors/slurm/__init__.py -> build/lib/snakemake/executors/slurm
-creating build/lib/snakemake/unit_tests/templates
-copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates
creating build/lib/snakemake/report/data
-copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data
-copying snakemake/report/data/results.py -> build/lib/snakemake/report/data
-copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data
copying snakemake/report/data/common.py -> build/lib/snakemake/report/data
copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data
-copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data
copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data
+copying snakemake/report/data/results.py -> build/lib/snakemake/report/data
+copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data
+copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data
+copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data
copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data
copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data
creating build/lib/snakemake/report/template
copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template
creating build/lib/snakemake/report/template/components
copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components
+creating build/lib/snakemake/unit_tests/templates
+copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates
+creating build/lib/snakemake/executors/slurm
+copying snakemake/executors/slurm/slurm_submit.py -> build/lib/snakemake/executors/slurm
+copying snakemake/executors/slurm/slurm_jobstep.py -> build/lib/snakemake/executors/slurm
+copying snakemake/executors/slurm/__init__.py -> build/lib/snakemake/executors/slurm
copying snakemake/report.css -> build/lib/snakemake
copying snakemake/gui.html -> build/lib/snakemake
copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors
-copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates
-copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates
copying snakemake/report/template/style.css -> build/lib/snakemake/report/template
copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template
copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template
-copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components
-copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components
copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components
+copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components
+copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates
+copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates
UPDATING build/lib/snakemake/_version.py
set build/lib/snakemake/_version.py to '7.32.4'
installing to build/bdist.linux-armv7l/wheel
@@ -2529,142 +2565,142 @@
running install_lib
creating build/bdist.linux-armv7l/wheel
creating build/bdist.linux-armv7l/wheel/snakemake
-copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/gui.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/_version.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/logging.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/report.css -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/parser.py -> build/bdist.linux-armv7l/wheel/./snakemake
-creating build/bdist.linux-armv7l/wheel/snakemake/executors
-copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/common.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/azure_batch.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-armv7l/wheel/./snakemake/executors
-creating build/bdist.linux-armv7l/wheel/snakemake/executors/slurm
-copying build/lib/snakemake/executors/slurm/slurm_submit.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors/slurm
-copying build/lib/snakemake/executors/slurm/slurm_jobstep.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors/slurm
-copying build/lib/snakemake/executors/slurm/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors/slurm
-creating build/bdist.linux-armv7l/wheel/snakemake/common
-copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-armv7l/wheel/./snakemake/common
-copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/common
+copying build/lib/snakemake/modules.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/__main__.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/script.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/utils.py -> build/bdist.linux-armv7l/wheel/./snakemake
creating build/bdist.linux-armv7l/wheel/snakemake/template_rendering
-copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-armv7l/wheel/./snakemake/template_rendering
copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-armv7l/wheel/./snakemake/template_rendering
+copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-armv7l/wheel/./snakemake/template_rendering
copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/template_rendering
-copying build/lib/snakemake/profiles.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/script.py -> build/bdist.linux-armv7l/wheel/./snakemake
copying build/lib/snakemake/gui.html -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/benchmark.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/decorators.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/stats.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/shell.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/scheduler.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/output_index.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/cwl.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/rules.py -> build/bdist.linux-armv7l/wheel/./snakemake
-creating build/bdist.linux-armv7l/wheel/snakemake/remote
-copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
-copying build/lib/snakemake/utils.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-armv7l/wheel/./snakemake
-creating build/bdist.linux-armv7l/wheel/snakemake/linting
-copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
-copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
-copying build/lib/snakemake/linting/links.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
-copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
-copying build/lib/snakemake/interfaces.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/io.py -> build/bdist.linux-armv7l/wheel/./snakemake
-creating build/bdist.linux-armv7l/wheel/snakemake/deployment
-copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
-copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
-copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
-copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
-copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
-copying build/lib/snakemake/persistence.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/modules.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/__main__.py -> build/bdist.linux-armv7l/wheel/./snakemake
-creating build/bdist.linux-armv7l/wheel/snakemake/unit_tests
-creating build/bdist.linux-armv7l/wheel/snakemake/unit_tests/templates
-copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests/templates
-copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests/templates
-copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests/templates
-copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests
-copying build/lib/snakemake/resources.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/jobs.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/workflow.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/wrapper.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/dag.py -> build/bdist.linux-armv7l/wheel/./snakemake
-creating build/bdist.linux-armv7l/wheel/snakemake/caching
-copying build/lib/snakemake/caching/local.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
-copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
-copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
-copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
-copying build/lib/snakemake/notebook.py -> build/bdist.linux-armv7l/wheel/./snakemake
-copying build/lib/snakemake/exceptions.py -> build/bdist.linux-armv7l/wheel/./snakemake
creating build/bdist.linux-armv7l/wheel/snakemake/report
-copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-armv7l/wheel/./snakemake/report
creating build/bdist.linux-armv7l/wheel/snakemake/report/data
-copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
-copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
-copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
-copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
+copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
+copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
+copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
+copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/data
+copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-armv7l/wheel/./snakemake/report
+copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/report
creating build/bdist.linux-armv7l/wheel/snakemake/report/template
+copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-armv7l/wheel/./snakemake/report/template
copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-armv7l/wheel/./snakemake/report/template
copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-armv7l/wheel/./snakemake/report/template
creating build/bdist.linux-armv7l/wheel/snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
+copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
-copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-armv7l/wheel/./snakemake/report/template
+copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-armv7l/wheel/./snakemake/report/template/components
copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/report/template
-copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/report
+creating build/bdist.linux-armv7l/wheel/snakemake/unit_tests
+creating build/bdist.linux-armv7l/wheel/snakemake/unit_tests/templates
+copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests/templates
+copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests/templates
+copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests/templates
+copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/unit_tests
+copying build/lib/snakemake/jobs.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/cwl.py -> build/bdist.linux-armv7l/wheel/./snakemake
+creating build/bdist.linux-armv7l/wheel/snakemake/executors
+copying build/lib/snakemake/executors/common.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+creating build/bdist.linux-armv7l/wheel/snakemake/executors/slurm
+copying build/lib/snakemake/executors/slurm/slurm_submit.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors/slurm
+copying build/lib/snakemake/executors/slurm/slurm_jobstep.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors/slurm
+copying build/lib/snakemake/executors/slurm/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors/slurm
+copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/executors/azure_batch.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-armv7l/wheel/./snakemake/executors
+copying build/lib/snakemake/logging.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/parser.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/wrapper.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/rules.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/resources.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/interfaces.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/benchmark.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/gui.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/decorators.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/stats.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-armv7l/wheel/./snakemake
+creating build/bdist.linux-armv7l/wheel/snakemake/caching
+copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
+copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
+copying build/lib/snakemake/caching/local.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
+copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/caching
+creating build/bdist.linux-armv7l/wheel/snakemake/linting
+copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
+copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
+copying build/lib/snakemake/linting/links.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
+copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-armv7l/wheel/./snakemake/linting
+copying build/lib/snakemake/output_index.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/profiles.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/persistence.py -> build/bdist.linux-armv7l/wheel/./snakemake
+creating build/bdist.linux-armv7l/wheel/snakemake/common
+copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-armv7l/wheel/./snakemake/common
+copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/common
+creating build/bdist.linux-armv7l/wheel/snakemake/deployment
+copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
+copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
+copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
+copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
+copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-armv7l/wheel/./snakemake/deployment
+copying build/lib/snakemake/shell.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/_version.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/scheduler.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/notebook.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/io.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/dag.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/exceptions.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/report.css -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-armv7l/wheel/./snakemake
+creating build/bdist.linux-armv7l/wheel/snakemake/remote
+copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-armv7l/wheel/./snakemake/remote
+copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-armv7l/wheel/./snakemake
+copying build/lib/snakemake/workflow.py -> build/bdist.linux-armv7l/wheel/./snakemake
running install_egg_info
running egg_info
creating snakemake.egg-info
@@ -2682,7 +2718,7 @@
Copying snakemake.egg-info to build/bdist.linux-armv7l/wheel/./snakemake-7.32.4.egg-info
running install_scripts
creating build/bdist.linux-armv7l/wheel/snakemake-7.32.4.dist-info/WHEEL
-creating '/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/.tmp-yavfw7ax/snakemake-7.32.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
+creating '/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/.tmp-wbtwldsg/snakemake-7.32.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
adding 'snakemake/__init__.py'
adding 'snakemake/__main__.py'
adding 'snakemake/_version.py'
@@ -2984,9 +3020,9 @@
copying downloadable files... [100%] tests/test_report/expected-results/report.html
copying static files...
-Writing evaluated template result to /build/reproducible-path/snakemake-7.32.4/docs/_build/html/_static/language_data.js
-Writing evaluated template result to /build/reproducible-path/snakemake-7.32.4/docs/_build/html/_static/basic.css
Writing evaluated template result to /build/reproducible-path/snakemake-7.32.4/docs/_build/html/_static/documentation_options.js
+Writing evaluated template result to /build/reproducible-path/snakemake-7.32.4/docs/_build/html/_static/basic.css
+Writing evaluated template result to /build/reproducible-path/snakemake-7.32.4/docs/_build/html/_static/language_data.js
Writing evaluated template result to /build/reproducible-path/snakemake-7.32.4/docs/_build/html/_static/js/versions.js
copying static files: done
copying extra files...
@@ -3120,7 +3156,7 @@
cachedir: .pytest_cache
rootdir: /build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build
configfile: pyproject.toml
-plugins: requests_mock-1.12.1, mock-3.14.0, typeguard-4.4.1
+plugins: mock-3.14.0, requests_mock-1.12.1, typeguard-4.4.1
collecting ... collected 395 items / 99 deselected / 296 selected
.pybuild/cpython3_3.13_snakemake/build/tests/test_expand.py::test_simple_expand PASSED [ 0%]
@@ -3135,34 +3171,34 @@
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.pybuild/cpython3_3.13_snakemake/build/tests/test_kubernetes.py::test_issue1041 SKIPPED [ 4%]
-.pybuild/cpython3_3.13_snakemake/build/tests/test_linting.py::test_lint[version-positive] SKIPPED [ 4%]
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+.pybuild/cpython3_3.13_snakemake/build/tests/test_linting.py::test_lint[path_add-positive] SKIPPED [ 13%]
+.pybuild/cpython3_3.13_snakemake/build/tests/test_linting.py::test_lint[path_add-negative] SKIPPED [ 13%]
.pybuild/cpython3_3.13_snakemake/build/tests/test_persistence.py::TestCleanupContainers::test_one_unrequired_container_gets_removed PASSED [ 13%]
.pybuild/cpython3_3.13_snakemake/build/tests/test_schema.py::test_config PASSED [ 14%]
.pybuild/cpython3_3.13_snakemake/build/tests/test_schema.py::test_config_ref PASSED [ 14%]
@@ -3196,19 +3232,19 @@
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test12 PASSED [ 23%]
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test13 PASSED [ 24%]
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test14 Timeout (0:01:00)!
-Thread 0xeecfe400 (most recent call first):
+Thread 0xaeffe400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf06ff400 (most recent call first):
+Thread 0xb09ff400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf10fe400 (most recent call first):
+Thread 0xaf7ff400 (most recent call first):
File "/usr/lib/python3.13/selectors.py", line 452 in select
File "/usr/lib/python3.13/asyncio/base_events.py", line 2002 in _run_once
File "/usr/lib/python3.13/asyncio/base_events.py", line 683 in run_forever
@@ -3220,7 +3256,7 @@
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf7e9c020 (most recent call first):
+Thread 0xb6f7c020 (most recent call first):
File "/usr/lib/python3.13/threading.py", line 1092 in join
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 894 in shutdown
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/scheduler.py", line 578 in schedule
@@ -3262,13 +3298,13 @@
File "<frozen runpy>", line 198 in _run_module_as_main
PASSED [ 24%]
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test_cluster_statusscript Timeout (0:01:00)!
-Thread 0xf2282400 (most recent call first):
+Thread 0xae5ff400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf33ef400 (most recent call first):
+Thread 0xb248f400 (most recent call first):
File "/usr/lib/python3.13/selectors.py", line 452 in select
File "/usr/lib/python3.13/asyncio/base_events.py", line 2002 in _run_once
File "/usr/lib/python3.13/asyncio/base_events.py", line 683 in run_forever
@@ -3280,19 +3316,19 @@
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xeecfe400 (most recent call first):
+Thread 0xaeffe400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf06ff400 (most recent call first):
+Thread 0xb09ff400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf7e9c020 (most recent call first):
+Thread 0xb6f7c020 (most recent call first):
File "/usr/lib/python3.13/threading.py", line 1092 in join
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 894 in shutdown
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/scheduler.py", line 578 in schedule
@@ -3517,38 +3553,12 @@
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test_checkpoint_allowed_rules PASSED [ 86%]
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test_modules_ruledeps_inheritance PASSED [ 86%]
.pybuild/cpython3_3.13_snakemake/build/tests/tests.py::test_issue1331 Timeout (0:01:00)!
-Thread 0xe94f3400 (most recent call first):
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
- File "/usr/lib/python3.13/threading.py", line 992 in run
- File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
- File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-
-Thread 0xed4fb400 (most recent call first):
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
- File "/usr/lib/python3.13/threading.py", line 992 in run
- File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
- File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-
-Thread 0xeccfa400 (most recent call first):
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
- File "/usr/lib/python3.13/threading.py", line 992 in run
- File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
- File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-
-Thread 0xeb4f7400 (most recent call first):
- File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 679 in run_group_job
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 59 in run
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 93 in _worker
- File "/usr/lib/python3.13/threading.py", line 992 in run
- File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
- File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-
-Thread 0xe8cf2400 (most recent call first):
- File "/usr/lib/python3.13/subprocess.py", line 2026 in _try_wait
- File "/usr/lib/python3.13/subprocess.py", line 2068 in _wait
- File "/usr/lib/python3.13/subprocess.py", line 1276 in wait
- File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/shell.py", line 284 in __new__
- File "/tmp/snakemake-9r4plojg/Snakefile", line 56 in __rule_align
+Thread 0xa8df4400 (most recent call first):
+ File "/usr/lib/python3.13/subprocess.py", line 1803 in _posix_spawn
+ File "/usr/lib/python3.13/subprocess.py", line 1859 in _execute_child
+ File "/usr/lib/python3.13/subprocess.py", line 1038 in __init__
+ File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/shell.py", line 258 in __new__
+ File "/tmp/snakemake-5l8r2f6s/Snakefile", line 34 in __rule_trimming
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 2656 in run_wrapper
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 699 in cached_or_run
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 59 in run
@@ -3557,78 +3567,71 @@
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xe9cf4400 (most recent call first):
- File "/usr/lib/python3.13/subprocess.py", line 2026 in _try_wait
- File "/usr/lib/python3.13/subprocess.py", line 2068 in _wait
- File "/usr/lib/python3.13/subprocess.py", line 1276 in wait
- File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/shell.py", line 284 in __new__
- File "/tmp/snakemake-9r4plojg/Snakefile", line 76 in __rule_sort
- File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 2656 in run_wrapper
- File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 699 in cached_or_run
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 59 in run
- File "/usr/lib/python3.13/concurrent/futures/thread.py", line 93 in _worker
- File "/usr/lib/python3.13/threading.py", line 992 in run
- File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
- File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-
-Thread 0xe6cee400 (most recent call first):
+Thread 0xacdfc400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xe74ef400 (most recent call first):
+Thread 0xa65ef400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xeacf6400 (most recent call first):
+Thread 0xa95f5400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xe7cf0400 (most recent call first):
+Thread 0xa6df0400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xe84f1400 (most recent call first):
+Thread 0xa75f1400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xee4fd400 (most recent call first):
+Thread 0xad5fd400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf2282400 (most recent call first):
+Thread 0xae5ff400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xeecfe400 (most recent call first):
+Thread 0xaeffe400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf06ff400 (most recent call first):
+Thread 0xb09ff400 (most recent call first):
File "/usr/lib/python3.13/concurrent/futures/thread.py", line 90 in _worker
File "/usr/lib/python3.13/threading.py", line 992 in run
File "/usr/lib/python3.13/threading.py", line 1041 in _bootstrap_inner
File "/usr/lib/python3.13/threading.py", line 1012 in _bootstrap
-Thread 0xf7e9c020 (most recent call first):
+Thread 0xb6f7c020 (most recent call first):
File "/usr/lib/python3.13/threading.py", line 359 in wait
- File "/usr/lib/python3.13/threading.py", line 511 in acquire
- File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/scheduler.py", line 546 in schedule
+ File "/usr/lib/python3.13/threading.py", line 659 in wait
+ File "/usr/lib/python3.13/threading.py", line 979 in start
+ File "/usr/lib/python3.13/concurrent/futures/thread.py", line 203 in _adjust_thread_count
+ File "/usr/lib/python3.13/concurrent/futures/thread.py", line 180 in submit
+ File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 634 in run_single_job
+ File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 582 in run
+ File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/executors/__init__.py", line 158 in run_jobs
+ File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/scheduler.py", line 685 in run
+ File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/scheduler.py", line 636 in schedule
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/workflow.py", line 1242 in execute
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/snakemake/__init__.py", line 792 in snakemake
File "/build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/tests/common.py", line 234 in run
@@ -3720,10 +3723,10 @@
warnings.warn(
tests/tests.py::test_glpk_solver
- <frozen os>:890: DeprecationWarning: This process (pid=27321) is multi-threaded, use of fork() may lead to deadlocks in the child.
+ <frozen os>:890: DeprecationWarning: This process (pid=17705) is multi-threaded, use of fork() may lead to deadlocks in the child.
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
-= 249 passed, 46 skipped, 99 deselected, 1 xfailed, 21 warnings in 1412.97s (0:23:32) =
+= 249 passed, 46 skipped, 99 deselected, 1 xfailed, 21 warnings in 1356.20s (0:22:36) =
I: pybuild pybuild:334: rm -fr /build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/bin /build/reproducible-path/snakemake-7.32.4/.pybuild/cpython3_3.13_snakemake/build/tests
make[1]: Leaving directory '/build/reproducible-path/snakemake-7.32.4'
create-stamp debian/debhelper-build-stamp
@@ -3755,8 +3758,8 @@
dpkg-gencontrol: warning: package snakemake-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined
dh_md5sums -O--buildsystem=pybuild
dh_builddeb -O--buildsystem=pybuild
-dpkg-deb: building package 'snakemake' in '../snakemake_7.32.4-7_all.deb'.
dpkg-deb: building package 'snakemake-doc' in '../snakemake-doc_7.32.4-7_all.deb'.
+dpkg-deb: building package 'snakemake' in '../snakemake_7.32.4-7_all.deb'.
dpkg-genbuildinfo --build=binary -O../snakemake_7.32.4-7_armhf.buildinfo
dpkg-genchanges --build=binary -O../snakemake_7.32.4-7_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
@@ -3764,12 +3767,14 @@
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/28015/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
-I: removing directory /srv/workspace/pbuilder/23809 and its subdirectories
-I: Current time: Wed Feb 12 04:13:52 -12 2025
-I: pbuilder-time-stamp: 1739376832
+I: removing directory /srv/workspace/pbuilder/28015 and its subdirectories
+I: Current time: Thu Feb 13 06:52:01 +14 2025
+I: pbuilder-time-stamp: 1739379121