Diff of the two buildlogs:

--
--- b1/build.log	2025-01-12 06:25:55.785351089 +0000
+++ b2/build.log	2025-01-12 11:16:20.247580876 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Sat Jan 11 15:20:56 -12 2025
-I: pbuilder-time-stamp: 1736652056
+I: Current time: Sun Jan 12 20:38:09 +14 2025
+I: pbuilder-time-stamp: 1736663889
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
 I: copying local configuration
@@ -34,52 +34,84 @@
 dpkg-source: info: applying doxygen_mathjax_path.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/2815/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/D01_modify_environment starting
+debug: Running on virt64a.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Jan 12 06:38 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build/reproducible-path'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='armhf'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 '
-  DISTRIBUTION='unstable'
-  HOME='/root'
-  HOST_ARCH='armhf'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf")
+  BASH_VERSION='5.2.37(1)-release'
+  BUILDDIR=/build/reproducible-path
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=armhf
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 '
+  DIRSTACK=()
+  DISTRIBUTION=unstable
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=arm
+  HOST_ARCH=armhf
   IFS=' 	
   '
-  INVOCATION_ID='859f2a1b49614f8f8d218a82dfcc8757'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='2815'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=f5b2eb4005fb45fcaaa6a27f991080b7
+  LANG=C
+  LANGUAGE=it_CH:it
+  LC_ALL=C
+  MACHTYPE=arm-unknown-linux-gnueabihf
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnueabihf
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=8523
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5ApiuTZh/pbuilderrc_koOp --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5ApiuTZh/b1 --logfile b1/build.log libsbml_5.20.4+dfsg-0.1.dsc'
-  SUDO_GID='110'
-  SUDO_UID='103'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://10.0.0.15:3142/'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5ApiuTZh/pbuilderrc_ND4H --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5ApiuTZh/b2 --logfile b2/build.log libsbml_5.20.4+dfsg-0.1.dsc'
+  SUDO_GID=114
+  SUDO_UID=108
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://10.0.0.15:3142/
 I: uname -a
-  Linux virt32z 6.1.0-29-armmp-lpae #1 SMP Debian 6.1.123-1 (2025-01-02) armv7l GNU/Linux
+  Linux i-capture-the-hostname 6.1.0-29-arm64 #1 SMP Debian 6.1.123-1 (2025-01-02) aarch64 GNU/Linux
 I: ls -l /bin
   lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/2815/tmp/hooks/D02_print_environment finished
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -777,7 +809,7 @@
 Get: 622 http://deb.debian.org/debian unstable/main armhf r-base-dev all 4.4.2-1 [4516 B]
 Get: 623 http://deb.debian.org/debian unstable/main armhf rdfind armhf 1.6.0-1+b1 [37.8 kB]
 Get: 624 http://deb.debian.org/debian unstable/main armhf swig armhf 4.3.0-0.1 [1440 kB]
-Fetched 402 MB in 51s (7806 kB/s)
+Fetched 402 MB in 57s (7047 kB/s)
 Preconfiguring packages ...
 Selecting previously unselected package libpython3.13-minimal:armhf.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19562 files and directories currently installed.)
@@ -2801,8 +2833,8 @@
 Setting up tzdata (2024b-5) ...
 
 Current default time zone: 'Etc/UTC'
-Local time is now:      Sun Jan 12 03:24:55 UTC 2025.
-Universal Time is now:  Sun Jan 12 03:24:55 UTC 2025.
+Local time is now:      Sun Jan 12 06:44:50 UTC 2025.
+Universal Time is now:  Sun Jan 12 06:44:50 UTC 2025.
 Run 'dpkg-reconfigure tzdata' if you wish to change it.
 
 Setting up libxcb-present0:armhf (1.17.0-2+b1) ...
@@ -3524,7 +3556,11 @@
 Building tag database...
  -> Finished parsing the build-deps
 I: Building the package
-I: Running cd /build/reproducible-path/libsbml-5.20.4+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../libsbml_5.20.4+dfsg-0.1_source.changes
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for unstable
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/libsbml-5.20.4+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../libsbml_5.20.4+dfsg-0.1_source.changes
 dpkg-buildpackage: info: source package libsbml
 dpkg-buildpackage: info: source version 5.20.4+dfsg-0.1
 dpkg-buildpackage: info: source distribution unstable
@@ -3686,10 +3722,10 @@
 
    To contact the developers directly, email libsbml-team@googlegroups.com
 
-   Configured on host 'virt32z'
+   Configured on host 'i-capture-the-hostname'
      host type                       = Linux
-     host operating system           = Linux 6.1.0-29-armmp-lpae
-     host CPU architecture           = armv7l
+     host operating system           = Linux 6.1.0-29-arm64
+     host CPU architecture           = aarch64
 
    General build flags:
      CC                              = /usr/bin/cc
@@ -3739,8 +3775,8 @@
 --   Compression support is enabled for .bz2 files
 -- 
 ----------------------------------------------------------------------
--- Configuring done (14.3s)
--- Generating done (1.9s)
+-- Configuring done (9.2s)
+-- Generating done (1.5s)
 CMake Warning:
   Manually-specified variables were not used by the project:
 
@@ -39067,22 +39103,13 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2536: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:970: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:970: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:546: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:547: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:548: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLWriter.cpp:343: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1161: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1161: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLWriter.cpp:343: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.cpp:1282: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1204: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
@@ -39093,77 +39120,82 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1756: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:154: warning: Found unknown command '@_tstruct_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:155: warning: Found unknown command '@_tsbmlbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.h:2212: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.h:2212: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:546: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:547: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:548: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:652: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:427: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:419: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.cpp:696: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.h:746: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:427: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:419: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_tldquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.cpp:696: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.h:746: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:632: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
@@ -39173,101 +39205,64 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.cpp:815: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.cpp:377: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:468: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4484: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2266: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.cpp:2592: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1656: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1265: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1229: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
@@ -39279,28 +39274,60 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:279: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1265: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1229: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:560: warning: Found unknown command '@_tif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:561: warning: Found unknown command '@_tmemberof_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:562: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:622: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
@@ -39315,13 +39342,24 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.cpp:5524: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4519: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:464: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:465: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2421: warning: Found unknown command '@_tif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2422: warning: Found unknown command '@_tmemberof_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2423: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:293: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
@@ -39330,23 +39368,6 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
@@ -39355,99 +39376,104 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:464: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:465: warning: Found unknown command '@_tbrief_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLErrorTable.h:52: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1218: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1218: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag <_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag </_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag <_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag </_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:917: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLErrorTable.h:52: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/validator/CompSBMLError.h:44: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/groups/validator/GroupsSBMLErrorTable.h:55: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1331: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1331: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.cpp:2197: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1754: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:360: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:361: warning: Found unknown command '@_tbrief_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_tldquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1383: warning: explicit link request to '_tFluxBoundOperation_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1262: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1263: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1264: warning: Found unknown command '@_tp_t'
@@ -39462,6 +39488,16 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
@@ -39473,10 +39509,10 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1321: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNamespaces.cpp:464: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.cpp:2022: warning: Found unknown command '@_tendcond_t'
@@ -39491,27 +39527,27 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2041: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/ModelCreator.cpp:539: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/ModelCreator.cpp:539: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:195: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:556: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:112: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:387: warning: Found unknown command '@_tenum_t'
@@ -67225,9 +67261,6 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:1099: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:1101: warning: Found unknown command '@_tcopydetails_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:1103: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLError.h:46: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLError.h:46: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLError.h:53: warning: Found unknown command '@_tcopydetails_t'
  docs for file Layout.h...
 Generating docs for file LineSegment.cpp...
 Generating docs for file LineSegment.h...
@@ -67307,7 +67340,10 @@
 Generating docs for file MultiConsistencyValidator.cpp...
 Generating docs for file MultiConsistencyValidator.h...
 Generating docs for file MultiIdentifierConsistencyValidator.cpp...
-Generating docs for file MultiIdentifierConsistencyValid/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLErrorTable.h:44: warning: Found unknown command '@_tcond_t'
+Generating docs for file MultiIdentifierConsistencyValid/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLError.h:46: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLError.h:46: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLError.h:53: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLErrorTable.h:44: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/validator/MultiSBMLErrorTable.h:44: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:360: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:361: warning: Found unknown command '@_tbrief_t'
@@ -78322,7 +78358,98 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1872: warning: Found unknown command '@_tli_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1872: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1874: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
+ator.h...
+Generating docs for file MultiMathMLConsistencyValidator.cpp...
+Generating docs for file MultiMathMLConsistencyValidator.h...
+Generating docs for file MultiSBMLError.h...
+Generating docs for file MultiSBMLErrorTable.h...
+Generating docs for file MultiValidator.cpp...
+Generating docs for file MultiValidator.h...
+Generating docs for file QualExtensionTypes.h...
+Generating docs for file qualfwd.h...
+Generating docs for file QualExtension.cpp...
+Generating docs for file QualExtension.h...
+Generating docs for file QualModelPlugin.cpp...
+Generating docs for file QualModelPlugin.h...
+Generating docs for file QualSBMLDocumentPlugin.cpp...
+Generating docs for file QualSBMLDocumentPlugin.h...
+Generating docs for file DefaultTerm.cpp...
+Generating docs for file DefaultTerm.h...
+Generating docs for file FunctionTerm.cpp...
+Generating docs for file FunctionTerm.h...
+Generating docs for file Input.cpp...
+Generating docs for file Input.h...
+Generating docs for file Output.cpp...
+Generating docs for file Output.h...
+Generating docs for file QualitativeSpecies.cpp...
+Generating docs for file QualitativeSpecies.h...
+Generating docs for file Transition.cpp...
+Generating docs for file Transition.h...
+Generating docs for file QualConsistencyValidator.cpp...
+Generating docs for file QualConsistencyValidator.h...
+Generating docs for file QualIdentifierConsistencyValidator.cpp...
+Generating docs for file QualIdentifierConsistencyValidator.h...
+Generating docs for file QualMathConsistencyValidator.cpp...
+Generating docs for file QualMathConsistencyValidator.h...
+Generating docs for file QualSBMLError.h...
+Generating docs for file QualSBMLErrorTable.h...
+Generating docs for file QualValidator.cpp...
+Generating docs for file QualValidator.h...
+Generating docs for file Parameter.cpp...
+Generating docs for file Parameter.h...
+Generating docs for file Priority.cpp...
+Generating docs for file Priority.h...
+Generating docs for file RateRule.cpp...
+Generating docs for file RateRule.h...
+Generating docs for file Reaction.cpp...
+Generating docs for file Reaction.h...
+Generating docs for file Rule.cpp...
+Generating docs for file Rule.h...
+Generating docs for file SBase.cpp...
+Generating docs for file SBase.h...
+Generating docs for file SBMLConstructorException.cpp...
+Generating docs for file SBMLConstructorException.h...
+Generating docs for file SBMLConvert.cpp...
+Generating docs for file SBMLDocument.cpp...
+Generating docs for file SBMLDocument.h...
+Generating docs for file SBMLError.cpp...
+Generating docs for file SBMLError.h...
+Generating docs for file SBMLErrorLog.cpp...
+Generating docs for file SBMLErrorLog.h...
+Generating docs for file SBMLErrorTable.h...
+Generating docs for file SBMLNamespaces.cpp...
+Generating docs for file SBMLNamespaces.h...
+Generating docs for file SBMLReader.cpp...
+Generating docs for file SBMLReader.h...
+Generating docs for file SBMLTransforms.cpp...
+Generating docs for file SBMLTransforms.h...
+Generating docs for file SBMLTypeCodes.cpp...
+Generating docs for file SBMLTypeCodes.h...
+Generating docs for file SBMLTypes.h...
+Generating docs for file SBMLVisitor.cpp...
+Generating docs for file SBMLVisitor.h...
+Generating docs for file SBMLWriter.cpp...
+Generating docs for file SBMLWriter.h...
+Generating docs for file SBO.cpp...
+Generating docs for file SBO.h...
+Generating docs for file SimpleSpeciesReference.cpp...
+Generating docs for file SimpleSpeciesReference.h...
+Generating docs for file Species.cpp...
+Generating docs for file Species.h...
+Generating docs for file SpeciesReference.cpp...
+Generating docs for file SpeciesReference.h...
+Generating docs for file SpeciesType.cpp...
+Generating docs for file SpeciesType.h...
+Generating docs for file StoichiometryMath.cpp...
+Generating docs for file StoichiometryMath.h...
+Generating docs for file SyntaxChecker.cpp...
+Generating docs for file SyntaxChecker.h...
+Generating docs for file Trigger.cpp...
+Generating docs for file Trigger.h...
+Generating docs for file Unit.cpp...
+Generating docs for file Unit.h...
+Generating docs for file UnitDefinition.cpp...
+Generating docs for f/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2047: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2032: warning: Found unknown command '@_tparam_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1546: warning: Found unknown command '@_tp_t'
@@ -78763,98 +78890,7 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:414: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:406: warning: Found unknown command '@_tif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:407: warning: Found unknown command '@_tmemberof_t'
-ator.h...
-Generating docs for file MultiMathMLConsistencyValidator.cpp...
-Generating docs for file MultiMathMLConsistencyValidator.h...
-Generating docs for file MultiSBMLError.h...
-Generating docs for file MultiSBMLErrorTable.h...
-Generating docs for file MultiValidator.cpp...
-Generating docs for file MultiValidator.h...
-Generating docs for file QualExtensionTypes.h...
-Generating docs for file qualfwd.h...
-Generating docs for file QualExtension.cpp...
-Generating docs for file QualExtension.h...
-Generating docs for file QualModelPlugin.cpp...
-Generating docs for file QualModelPlugin.h...
-Generating docs for file QualSBMLDocumentPlugin.cpp...
-Generating docs for file QualSBMLDocumentPlugin.h...
-Generating docs for file DefaultTerm.cpp...
-Generating docs for file DefaultTerm.h...
-Generating docs for file FunctionTerm.cpp...
-Generating docs for file FunctionTerm.h...
-Generating docs for file Input.cpp...
-Generating docs for file Input.h...
-Generating docs for file Output.cpp...
-Generating docs for file Output.h...
-Generating docs for file QualitativeSpecies.cpp...
-Generating docs for file QualitativeSpecies.h...
-Generating docs for file Transition.cpp...
-Generating docs for file Transition.h...
-Generating docs for file QualConsistencyValidator.cpp...
-Generating docs for file QualConsistencyValidator.h...
-Generating docs for file QualIdentifierConsistencyValidator.cpp...
-Generating docs for file QualIdentifierConsistencyValidator.h...
-Generating docs for file QualMathConsistencyValidator.cpp...
-Generating docs for file QualMathConsistencyValidator.h...
-Generating docs for file QualSBMLError.h...
-Generating docs for file QualSBMLErrorTable.h...
-Generating docs for file QualValidator.cpp...
-Generating docs for file QualValidator.h...
-Generating docs for file Parameter.cpp...
-Generating docs for file Parameter.h...
-Generating docs for file Priority.cpp...
-Generating docs for file Priority.h...
-Generating docs for file RateRule.cpp...
-Generating docs for file RateRule.h...
-Generating docs for file Reaction.cpp...
-Generating docs for file Reaction.h...
-Generating docs for file Rule.cpp...
-Generating docs for file Rule.h...
-Generating docs for file SBase.cpp...
-Generating docs for file SBase.h...
-Generating docs for file SBMLConstructorException.cpp...
-Generating docs for file SBMLConstructorException.h...
-Generating docs for file SBMLConvert.cpp...
-Generating docs for file SBMLDocument.cpp...
-Generating docs for file SBMLDocument.h...
-Generating docs for file SBMLError.cpp...
-Generating docs for file SBMLError.h...
-Generating docs for file SBMLErrorLog.cpp...
-Generating docs for file SBMLErrorLog.h...
-Generating docs for file SBMLErrorTable.h...
-Generating docs for file SBMLNamespaces.cpp...
-Generating docs for file SBMLNamespaces.h...
-Generating docs for file SBMLReader.cpp...
-Generating docs for file SBMLReader.h...
-Generating docs for file SBMLTransforms.cpp...
-Generating docs for file SBMLTransforms.h...
-Generating docs for file SBMLTypeCodes.cpp...
-Generating docs for file SBMLTypeCodes.h...
-Generating docs for file SBMLTypes.h...
-Generating docs for file SBMLVisitor.cpp...
-Generating docs for file SBMLVisitor.h...
-Generating docs for file SBMLWriter.cpp...
-Generating docs for file SBMLWriter.h...
-Generating docs for file SBO.cpp...
-Generating docs for file SBO.h...
-Generating docs for file SimpleSpeciesReference.cpp...
-Generating docs for file SimpleSpeciesReference.h...
-Generating docs for file Species.cpp...
-Generating docs for file Species.h...
-Generating docs for file SpeciesReference.cpp...
-Generating docs for file SpeciesReference.h...
-Generating docs for file SpeciesType.cpp...
-Generating docs for file SpeciesType.h...
-Generating docs for file StoichiometryMath.cpp...
-Generating docs for file StoichiometryMath.h...
-Generating docs for file SyntaxChecker.cpp...
-Generating docs for file SyntaxChecker.h...
-Generating docs for file Trigger.cpp...
-Generating docs for file Trigger.h...
-Generating docs for file Unit.cpp...
-Generating docs for file Unit.h...
-Generating docs for file UnitDefinition.cpp...
-Generating docs for f/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:408: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:408: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:488: warning: Found unknown command '@_tif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:489: warning: Found unknown command '@_tmemberof_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:490: warning: Found unknown command '@_tendif_t'
@@ -79166,6 +79202,72 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/util.h:197: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/util.h:198: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/util.h:198: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.cpp:1273: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2302: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2302: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2320: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2320: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2358: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2358: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1871: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1872: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1873: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1875: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1876: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1876: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1877: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1877: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1879: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1882: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1893: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1894: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1895: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1896: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1897: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1899: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1900: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1900: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1901: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1901: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1903: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1906: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1919: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1920: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1921: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1923: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1924: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1924: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1925: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1925: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1927: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2035: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2037: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2038: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2038: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2039: warning: Found unknown command '@_tli_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2039: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2041: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1857: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1859: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1861: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.cpp:1273: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1832: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1834: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1845: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1847: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2051: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2052: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2054: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2054: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2056: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2066: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2067: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2068: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2070: warning: Found unknown command '@_treturn_t'
 ile UnitDefinition.h...
 Generating docs for file UnitKind.c...
 Generating docs for file UnitKind.h...
@@ -79249,73 +79351,7 @@
 Generating docs for file LibXMLHandler.cpp...
 Generating docs for file LibXMLHandler.h...
 Generating docs for file LibXMLNamespaces.cpp...
-Generating docs for file LibXMLNamespa/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.cpp:1273: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2302: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2302: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2320: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2320: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2358: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2358: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1871: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1872: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1873: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1875: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1876: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1876: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1877: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1877: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1879: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1882: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1893: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1894: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1895: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1896: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1897: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1899: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1900: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1900: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1901: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1901: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1903: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1906: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1919: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1920: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1921: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1923: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1924: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1924: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1925: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1925: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1927: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2035: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2037: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2038: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2038: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2039: warning: Found unknown command '@_tli_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2039: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2041: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1857: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1859: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1861: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.cpp:1273: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1832: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1834: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1845: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:1847: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2051: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2052: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2054: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2054: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2056: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2066: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2067: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2068: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2070: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2071: warning: Found unknown command '@_tc_t'
+Generating docs for file LibXMLNamespa/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2071: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2073: warning: Found unknown command '@_tmemberof_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2083: warning: Found unknown command '@_tparam_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2084: warning: Found unknown command '@_tparam_t'
@@ -87852,22 +87888,13 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2536: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:970: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:970: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:546: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:547: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:548: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLWriter.cpp:343: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1161: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1161: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLWriter.cpp:343: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.cpp:1282: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1204: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
@@ -87878,77 +87905,82 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1756: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:154: warning: Found unknown command '@_tstruct_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:155: warning: Found unknown command '@_tsbmlbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.h:2212: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.h:2212: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:546: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:547: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:548: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:652: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:427: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:419: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.cpp:696: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.h:746: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:427: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:419: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_tldquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.cpp:696: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.h:746: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:632: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
@@ -87958,101 +87990,64 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.cpp:815: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.cpp:377: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:468: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4484: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2266: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.cpp:2592: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1656: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1265: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1229: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
@@ -88064,28 +88059,60 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:279: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1265: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1229: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesReference.h:2006: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:560: warning: Found unknown command '@_tif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:561: warning: Found unknown command '@_tmemberof_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:562: warning: Found unknown command '@_tendif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:622: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
@@ -88100,13 +88127,24 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.cpp:5524: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4519: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:464: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:465: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2421: warning: Found unknown command '@_tif_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2422: warning: Found unknown command '@_tmemberof_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2423: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:293: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
@@ -88115,23 +88153,6 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag </_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
@@ -88140,99 +88161,104 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:464: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:465: warning: Found unknown command '@_tbrief_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLErrorTable.h:52: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1218: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1218: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag <_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag </_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag <_tcode_t> found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag </_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:917: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLErrorTable.h:52: warning: Found unknown command '@_tcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/validator/CompSBMLError.h:44: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/groups/validator/GroupsSBMLErrorTable.h:55: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1331: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1331: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.cpp:2197: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1754: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:360: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:361: warning: Found unknown command '@_tbrief_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_tldquo_t; found
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1383: warning: explicit link request to '_tFluxBoundOperation_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1262: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1263: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1264: warning: Found unknown command '@_tp_t'
@@ -88247,6 +88273,16 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2513: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2514: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
@@ -88258,10 +88294,10 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1321: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNamespaces.cpp:464: warning: Found unknown command '@_tendcond_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.cpp:2022: warning: Found unknown command '@_tendcond_t'
@@ -88276,27 +88312,27 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2041: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/ModelCreator.cpp:539: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/ModelCreator.cpp:539: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:195: warning: Found unknown command '@_tclass_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:556: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:112: warning: Found unknown command '@_treturn_t'
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:387: warning: Found unknown command '@_tenum_t'
@@ -133944,7 +133980,6 @@
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h...
 Pa/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.cpp:413: warning: Conditional section with label 'doxygenLibsbmlInternal' does not have a corresponding \endcond command within this file.
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp:969: warning: Conditional section with label 'doxygenLibsbmlInternal' does not have a corresponding \endcond command within this file.
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.h:126: warning: Conditional section with label 'doxygenLibsbmlInternal' does not have a corresponding \endcond command within this file.
 rsing file /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h...
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp...
 Parsing file /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp...
@@ -133979,7 +134014,8 @@
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h...
 Parsing file /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h...
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp...
-Parsing file /build/reproducible-path/libsbml-5.20./build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:944: warning: Conditional section with label 'doxygenLibsbmlInternal' does not have a corresponding \endcond command within this file.
+Parsing file /build/reproducible-path/libsbml-5.20./build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.h:126: warning: Conditional section with label 'doxygenLibsbmlInternal' does not have a corresponding \endcond command within this file.
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.cpp:944: warning: Conditional section with label 'doxygenLibsbmlInternal' does not have a corresponding \endcond command within this file.
 /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1242: warning: the \endcond does not have a corresponding \cond in this file
 4+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.cpp...
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualModelPlugin.h...
@@ -154440,11 +154476,6 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:222: warning: included file callExternalValidator.py is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:225: warning: included file convertSBML.py is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:228: warning: included file createExampleSBML.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:231: warning: included file echoSBML.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:236: warning: included file getAllElementsWithNotes.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:238: warning: included file printAnnotation.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:241: warning: included file printMath.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:244: warning: included file printNotes.py is not found. Check your EXAMPLE_PATH
 -path/libsbml-5.20.4+dfsg/docs/src/libsbml-math.txt...
 Parsing file /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-math.txt...
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-news.txt...
@@ -154531,7 +154562,12 @@
 Generating docs for example callExternalValidator.py...
 Generating docs for example convertSBML.py...
 Generating docs for example createExampleSBML.py...
-Generating docs fo/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:247: warning: included file printRegisteredPackages.py is not found. Check your EXAMPLE_PATH
+Generating docs fo/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:231: warning: included file echoSBML.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:236: warning: included file getAllElementsWithNotes.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:238: warning: included file printAnnotation.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:241: warning: included file printMath.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:244: warning: included file printNotes.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:247: warning: included file printRegisteredPackages.py is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:250: warning: included file printSBML.py is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:253: warning: included file printSupported.py is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:256: warning: included file printUnits.py is not found. Check your EXAMPLE_PATH
@@ -162298,8 +162334,6 @@
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:330: warning: included file translateMath.cpp is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:333: warning: included file unsetAnnotation.cpp is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:336: warning: included file unsetNotes.cpp is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:337: warning: included file validateSBML.cpp is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:339: warning: included file flattenModel.cpp is not found. Check your EXAMPLE_PATH
 l/packages/qual/validator/QualSBMLError.h...
 Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/validator/QualSBMLErrorTable.h...
 Parsing file /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/validator/QualSBMLErrorTable.h...
@@ -162394,7 +162428,9 @@
 Generating docs for example translateMath.cpp...
 Generating docs for example unsetAnnotation.cpp...
 Generating docs for example unsetNotes.cpp...
-Generating docs for example va/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:342: warning: included file spec_example1.cpp is not found. Check your EXAMPLE_PATH
+Generating docs for example va/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:337: warning: included file validateSBML.cpp is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:339: warning: included file flattenModel.cpp is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:342: warning: included file spec_example1.cpp is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:345: warning: included file spec_example2.cpp is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:348: warning: included file spec_example3.cpp is not found. Check your EXAMPLE_PATH
 /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:351: warning: included file spec_example4.cpp is not found. Check your EXAMPLE_PATH
@@ -177572,7 +177608,7 @@
 1:  TestMultipleNamespaces
 1:  SBMLCompCheckConsistency
 1: 100%: Checks: 14, Failures: 0, Errors: 0
- 1/65 Test  #1: test_comp_extensions_run ......................   Passed    0.78 sec
+ 1/65 Test  #1: test_comp_extensions_run ......................   Passed    1.41 sec
 test 2
       Start  2: test_comp_sbase_run
 
@@ -177593,7 +177629,7 @@
 2:  comp_sBaseRef
 2:  comp_submodel
 2: 100%: Checks: 105, Failures: 0, Errors: 0
- 2/65 Test  #2: test_comp_sbase_run ...........................   Passed    1.04 sec
+ 2/65 Test  #2: test_comp_sbase_run ...........................   Passed    1.41 sec
 test 3
       Start  3: test_comp_util_run
 
@@ -177611,7 +177647,7 @@
 3:  SBMLCompFlatteningNewFlags
 3:  SBMLCompFlatteningConverterStripPackage
 3: 100%: Checks: 365, Failures: 0, Errors: 0
- 3/65 Test  #3: test_comp_util_run ............................   Passed    9.64 sec
+ 3/65 Test  #3: test_comp_util_run ............................   Passed   19.26 sec
 test 4
       Start  4: test_comp_validator_run
 
@@ -177631,7 +177667,7 @@
 4: 100%: Checks: 14, Failures: 0
 4: Testing Unit Consistency Constraints (10500 - 10599).
 4: 100%: Checks: 22, Failures: 0
- 4/65 Test  #4: test_comp_validator_run .......................   Passed    1.33 sec
+ 4/65 Test  #4: test_comp_validator_run .......................   Passed    2.84 sec
 test 5
       Start  5: test_sbml_package_fbc_run
 
@@ -177645,7 +177681,7 @@
 5:  ReadFbcExtension
 5:  FbcAssociation
 5: 100%: Checks: 38, Failures: 0, Errors: 0
- 5/65 Test  #5: test_sbml_package_fbc_run .....................   Passed    0.54 sec
+ 5/65 Test  #5: test_sbml_package_fbc_run .....................   Passed    0.92 sec
 test 6
       Start  6: test_fbc_validator_run
 
@@ -177663,7 +177699,7 @@
 6: 100%: Checks: 248, Failures: 0
 6: Testing Id Consistency Constraints (10300 - 10399).
 6: 100%: Checks: 13, Failures: 0
- 6/65 Test  #6: test_fbc_validator_run ........................   Passed    1.28 sec
+ 6/65 Test  #6: test_fbc_validator_run ........................   Passed    2.78 sec
 test 7
       Start  7: test_extension_package_groups_run
 
@@ -177677,7 +177713,7 @@
 7:  ReadGroupsExtension
 7:  GroupsModelPlugin
 7: 100%: Checks: 25, Failures: 0, Errors: 0
- 7/65 Test  #7: test_extension_package_groups_run .............   Passed    0.33 sec
+ 7/65 Test  #7: test_extension_package_groups_run .............   Passed    0.31 sec
 test 8
       Start  8: test_groups_validator_run
 
@@ -177695,7 +177731,7 @@
 8: 100%: Checks: 95, Failures: 0
 8: Testing Id Consistency Constraints (10300 - 10399).
 8: 100%: Checks: 11, Failures: 0
- 8/65 Test  #8: test_groups_validator_run .....................   Passed    0.33 sec
+ 8/65 Test  #8: test_groups_validator_run .....................   Passed    0.42 sec
 test 9
       Start  9: test_l3v2extendedmath_validator_run
 
@@ -177713,7 +177749,7 @@
 9: 100%: Checks: 4, Failures: 0
 9: Testing Unit Consistency Constraints (10500 - 10599).
 9: 100%: Checks: 6, Failures: 0
- 9/65 Test  #9: test_l3v2extendedmath_validator_run ...........   Passed    0.12 sec
+ 9/65 Test  #9: test_l3v2extendedmath_validator_run ...........   Passed    0.19 sec
 test 10
       Start 10: test_extension_package_l3v2extendedmath_run
 
@@ -177727,7 +177763,7 @@
 10:  ReadL3v2EMExtension
 10:  ReadWriteL3v2Infix
 10: 100%: Checks: 18, Failures: 0, Errors: 0
-10/65 Test #10: test_extension_package_l3v2extendedmath_run ...   Passed    0.23 sec
+10/65 Test #10: test_extension_package_l3v2extendedmath_run ...   Passed    0.30 sec
 test 11
       Start 11: test_sbml_package_layout_run
 
@@ -177756,7 +177792,7 @@
 11:  SBMLHandler
 11:  LayoutWriting
 11: 100%: Checks: 288, Failures: 0, Errors: 0
-11/65 Test #11: test_sbml_package_layout_run ..................   Passed    3.68 sec
+11/65 Test #11: test_sbml_package_layout_run ..................   Passed    2.33 sec
 test 12
       Start 12: test_layout_validator_run
 
@@ -177774,7 +177810,7 @@
 12: 100%: Checks: 223, Failures: 0
 12: Testing Id Consistency Constraints (10300 - 10399).
 12: 100%: Checks: 18, Failures: 0
-12/65 Test #12: test_layout_validator_run .....................   Passed    1.51 sec
+12/65 Test #12: test_layout_validator_run .....................   Passed    3.45 sec
 test 13
       Start 13: test_extension_package_qual_run
 
@@ -177788,7 +177824,7 @@
 13:  ReadQualExtension
 13:  GetAllElements
 13: 100%: Checks: 20, Failures: 0, Errors: 0
-13/65 Test #13: test_extension_package_qual_run ...............   Passed    0.26 sec
+13/65 Test #13: test_extension_package_qual_run ...............   Passed    0.42 sec
 test 14
       Start 14: test_sbml_package_qual_run
 
@@ -177806,7 +177842,7 @@
 14:  ListOfFunctionTerms
 14:  CopyAndClone
 14: 100%: Checks: 73, Failures: 0, Errors: 0
-14/65 Test #14: test_sbml_package_qual_run ....................   Passed    0.63 sec
+14/65 Test #14: test_sbml_package_qual_run ....................   Passed    1.14 sec
 test 15
       Start 15: test_qual_validator_run
 
@@ -177826,7 +177862,7 @@
 15: 100%: Checks: 4, Failures: 0
 15: Testing Math Consistency Constraints (10200 - 10299).
 15: 100%: Checks: 3, Failures: 0
-15/65 Test #15: test_qual_validator_run .......................   Passed    0.42 sec
+15/65 Test #15: test_qual_validator_run .......................   Passed    0.94 sec
 test 16
       Start 16: test_sbml_package_render_run
 
@@ -177865,7 +177901,7 @@
 16:  RenderReading
 16:  RenderWriting
 16: 100%: Checks: 136, Failures: 0, Errors: 0
-16/65 Test #16: test_sbml_package_render_run ..................   Passed    2.40 sec
+16/65 Test #16: test_sbml_package_render_run ..................   Passed    4.08 sec
 test 17
       Start 17: test_render_validator_run
 
@@ -177881,7 +177917,7 @@
 17: 
 17: Testing General XML Consistency Constraints (20000 - 29999).
 17: 100%: Checks: 111, Failures: 0
-17/65 Test #17: test_render_validator_run .....................   Passed    0.42 sec
+17/65 Test #17: test_render_validator_run .....................   Passed    0.78 sec
 test 18
       Start 18: test_sbml_annotation_run
 
@@ -177908,7 +177944,7 @@
 18:  RDFAnnotationV4
 18:  UnusualRDFAnnotation
 18: 100%: Checks: 193, Failures: 0, Errors: 0
-18/65 Test #18: test_sbml_annotation_run ......................   Passed    2.11 sec
+18/65 Test #18: test_sbml_annotation_run ......................   Passed    3.78 sec
 test 19
       Start 19: test_sbml_conversion_run
 
@@ -177930,7 +177966,7 @@
 19:  RateOfConverter
 19:  SBMLRateRuleConverter
 19: 100%: Checks: 188, Failures: 0, Errors: 0
-19/65 Test #19: test_sbml_conversion_run ......................   Passed    2.97 sec
+19/65 Test #19: test_sbml_conversion_run ......................   Passed    6.36 sec
 test 20
       Start 20: test_sbml_extension_run
 
@@ -177949,7 +177985,7 @@
 20:  SBMLExtensionRegistry
 20:  TestUnknownPackages
 20: 100%: Checks: 30, Failures: 0, Errors: 0
-20/65 Test #20: test_sbml_extension_run .......................   Passed    0.35 sec
+20/65 Test #20: test_sbml_extension_run .......................   Passed    0.53 sec
 test 21
       Start 21: test_sbml_math_run
 
@@ -177977,7 +178013,7 @@
 21:  TestInferRnFunctions
 21:  TestDerivFunctions
 21: 100%: Checks: 739, Failures: 0, Errors: 0
-21/65 Test #21: test_sbml_math_run ............................   Passed    6.35 sec
+21/65 Test #21: test_sbml_math_run ............................   Passed    4.48 sec
 test 22
       Start 22: test_sbml_sbml_run
 
@@ -178093,7 +178129,7 @@
 22:  SBaseIdName
 22:  Generic Attribute Functions
 22: 100%: Checks: 1746, Failures: 0, Errors: 0
-22/65 Test #22: test_sbml_sbml_run ............................   Passed   14.76 sec
+22/65 Test #22: test_sbml_sbml_run ............................   Passed   13.30 sec
 test 23
       Start 23: test_sbml_units_run
 
@@ -178114,7 +178150,7 @@
 23:  UnitFormulaFormatter3
 23:  DerivedUnitDefinitionUndefined
 23: 100%: Checks: 178, Failures: 0, Errors: 0
-23/65 Test #23: test_sbml_units_run ...........................   Passed    2.69 sec
+23/65 Test #23: test_sbml_units_run ...........................   Passed    3.94 sec
 test 24
       Start 24: test_sbml_util_run
 
@@ -178127,7 +178163,7 @@
 24:  Stack
 24:  StringBuffer
 24: 100%: Checks: 57, Failures: 0, Errors: 0
-24/65 Test #24: test_sbml_util_run ............................   Passed    0.43 sec
+24/65 Test #24: test_sbml_util_run ............................   Passed    0.62 sec
 test 25
       Start 25: test_sbml_validator_run
 
@@ -178204,7 +178240,7 @@
 25: 100%: Checks: 30, Failures: 0
 25: Testing Modeling Practice Constraints (80000 - 89999).
 25: 100%: Checks: 56, Failures: 0
-25/65 Test #25: test_sbml_validator_run .......................   Passed   23.11 sec
+25/65 Test #25: test_sbml_validator_run .......................   Passed   17.10 sec
 test 26
       Start 26: test_sbml_xml_run
 
@@ -178226,11 +178262,11 @@
 26:  XMLErrorLog
 26:  XMLInputStream
 26:  XMLOutputStream
-26: <!-- Created by foo version bar on 2025-01-11 17:58 with libSBML version 5.20.4. -->
+26: <!-- Created by foo version bar on 2025-01-13 00:42 with libSBML version 5.20.4. -->
 26:  XMLAttributesC
 26:  XMLExceptions
 26: 100%: Checks: 131, Failures: 0, Errors: 0
-26/65 Test #26: test_sbml_xml_run .............................   Passed    2.00 sec
+26/65 Test #26: test_sbml_xml_run .............................   Passed    1.64 sec
 test 27
       Start 27: test_java_binding
 
@@ -178239,8 +178275,8 @@
 27: Environment variables: 
 27:  LD_LIBRARY_PATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/java:
 27: Test timeout computed to be: 3000
-27: ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
-27/65 Test #27: test_java_binding .............................   Passed    3.15 sec
+27: .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+27/65 Test #27: test_java_binding .............................   Passed    5.53 sec
 test 28
       Start 28: test_java_printversion
 
@@ -178248,7 +178284,7 @@
 28: Working Directory: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/java
 28: Test timeout computed to be: 3000
 28: .
-28/65 Test #28: test_java_printversion ........................   Passed    0.97 sec
+28/65 Test #28: test_java_printversion ........................   Passed    1.01 sec
 test 29
       Start 29: test_perl_binding
 
@@ -178299,9 +178335,9 @@
 29: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/perl/t/07__TestModelHistory.t .......... ok
 29: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/perl/t/07__TestRDFAnnotation2.t ........ ok
 29: All tests successful.
-29: Files=41, Tests=3364, 26 wallclock secs ( 0.66 usr  0.09 sys + 12.41 cusr  2.22 csys = 15.38 CPU)
+29: Files=41, Tests=3364, 30 wallclock secs ( 0.84 usr  0.12 sys + 20.26 cusr  1.70 csys = 22.92 CPU)
 29: Result: PASS
-29/65 Test #29: test_perl_binding .............................   Passed   27.26 sec
+29/65 Test #29: test_perl_binding .............................   Passed   30.17 sec
 test 30
       Start 30: test_python_binding
 
@@ -178314,13 +178350,13 @@
 30:   re_libxml = re.compile('^ USE_LIBXML  \s* = \s* 1', re.X)
 30: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/python/test/sbml/TestReadSBML.py:51: SyntaxWarning: invalid escape sequence '\s'
 30:   re_xerces = re.compile('^ USE_XERCES  \s* = \s* 1', re.X)
-30: ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................<!-- Created by foo version bar on 2025-01-11 17:58 with libSBML version 5.20.4. -->
-30: .........................................................................................................................................................................................................................................................................................................................................................
+30: ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................<!-- Created by foo version bar on 2025-01-13 00:43 with libSBML version 5.20.4. -->
+30: ...........................................................................................................................................................................................................................................................................................................................................................
 30: ----------------------------------------------------------------------
-30: Ran 1819 tests in 1.576s
+30: Ran 1819 tests in 1.710s
 30: 
 30: OK
-30/65 Test #30: test_python_binding ...........................   Passed    6.01 sec
+30/65 Test #30: test_python_binding ...........................   Passed    8.53 sec
 test 31
       Start 31: test_python_printversion
 
@@ -178329,7 +178365,7 @@
 31: Environment variables: 
 31:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 31: Test timeout computed to be: 3000
-31/65 Test #31: test_python_printversion ......................   Passed    0.62 sec
+31/65 Test #31: test_python_printversion ......................   Passed    0.55 sec
 test 32
       Start 32: test_python_addCVTerms
 
@@ -178338,7 +178374,7 @@
 32: Environment variables: 
 32:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 32: Test timeout computed to be: 3000
-32/65 Test #32: test_python_addCVTerms ........................   Passed    0.79 sec
+32/65 Test #32: test_python_addCVTerms ........................   Passed    0.72 sec
 test 33
       Start 33: test_python_addingEvidenceCodes_1
 
@@ -178347,7 +178383,7 @@
 33: Environment variables: 
 33:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 33: Test timeout computed to be: 3000
-33/65 Test #33: test_python_addingEvidenceCodes_1 .............   Passed    0.77 sec
+33/65 Test #33: test_python_addingEvidenceCodes_1 .............   Passed    0.60 sec
 test 34
       Start 34: test_python_addingEvidenceCodes_2
 
@@ -178356,7 +178392,7 @@
 34: Environment variables: 
 34:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 34: Test timeout computed to be: 3000
-34/65 Test #34: test_python_addingEvidenceCodes_2 .............   Passed    0.71 sec
+34/65 Test #34: test_python_addingEvidenceCodes_2 .............   Passed    0.83 sec
 test 35
       Start 35: test_python_addModelHistory
 
@@ -178369,7 +178405,7 @@
 35: Set created date:      succeeded
 35: Set modified date:     succeeded
 35: Set model history:     unknown
-35/65 Test #35: test_python_addModelHistory ...................   Passed    0.73 sec
+35/65 Test #35: test_python_addModelHistory ...................   Passed    0.57 sec
 test 36
       Start 36: test_python_append_to_note
 
@@ -178386,7 +178422,7 @@
 36: Body after change: 
 36: <body xmlns="http://www.w3.org/1999/xhtml">
 36:   <p xmlns="http://www.w3.org/1999/xhtml">Some notes</p>a new note</body>
-36/65 Test #36: test_python_append_to_note ....................   Passed    0.72 sec
+36/65 Test #36: test_python_append_to_note ....................   Passed    0.69 sec
 test 37
       Start 37: test_python_appendAnnotation
 
@@ -178408,7 +178444,7 @@
 38: 
 38: Conversion completed.
 38: 
-38/65 Test #38: test_python_convertSBML .......................   Passed    0.78 sec
+38/65 Test #38: test_python_convertSBML .......................   Passed    0.82 sec
 test 39
       Start 39: test_python_createExampleSBML
 
@@ -178426,7 +178462,7 @@
 39: Notice: encountered 1 validation warning in model 'functionExample'.
 39: 
 39: Wrote file 'functiondef.xml'
-39/65 Test #39: test_python_createExampleSBML .................   Passed    0.83 sec
+39/65 Test #39: test_python_createExampleSBML .................   Passed    1.41 sec
 test 40
       Start 40: test_python_createSimpleModel
 
@@ -178478,7 +178514,7 @@
 40:   </model>
 40: </sbml>
 40: 
-40/65 Test #40: test_python_createSimpleModel .................   Passed    0.73 sec
+40/65 Test #40: test_python_createSimpleModel .................   Passed    0.78 sec
 test 41
       Start 41: test_python_echoSBML
 
@@ -178488,7 +178524,7 @@
 41:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 41: Test timeout computed to be: 3000
 41: [OK] Echoed /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml to echoSBML.out.xml
-41/65 Test #41: test_python_echoSBML ..........................   Passed    0.53 sec
+41/65 Test #41: test_python_echoSBML ..........................   Passed    0.65 sec
 test 42
       Start 42: test_python_evaluateCustomMath
 
@@ -178498,7 +178534,7 @@
 42:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 42: Test timeout computed to be: 3000
 42: 2*3+4 = 10.0
-42/65 Test #42: test_python_evaluateCustomMath ................   Passed    0.56 sec
+42/65 Test #42: test_python_evaluateCustomMath ................   Passed    0.61 sec
 test 43
       Start 43: test_python_getAllElementsWithNotes
 
@@ -178509,11 +178545,11 @@
 43: Test timeout computed to be: 3000
 43: 
 43:             filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
-43:       read time (ms): 2.401123046875
+43:       read time (ms): 3.18994140625
 43:     searching ......:
-43:     search time (ms): 4.653564453125
+43:     search time (ms): 8.679931640625
 43:  elements with notes: 0
-43/65 Test #43: test_python_getAllElementsWithNotes ...........   Passed    0.59 sec
+43/65 Test #43: test_python_getAllElementsWithNotes ...........   Passed    0.79 sec
 test 44
       Start 44: test_python_inlineInitialAssignments
 
@@ -178522,7 +178558,7 @@
 44: Environment variables: 
 44:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 44: Test timeout computed to be: 3000
-44/65 Test #44: test_python_inlineInitialAssignments ..........   Passed    0.75 sec
+44/65 Test #44: test_python_inlineInitialAssignments ..........   Passed    0.69 sec
 test 45
       Start 45: test_python_printAnnotation
 
@@ -178533,7 +178569,7 @@
 45: Test timeout computed to be: 3000
 45: filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
 45: 
-45/65 Test #45: test_python_printAnnotation ...................   Passed    0.75 sec
+45/65 Test #45: test_python_printAnnotation ...................   Passed    0.70 sec
 test 46
       Start 46: test_python_printMath
 
@@ -178549,7 +178585,7 @@
 46: 
 46: 
 46: 
-46/65 Test #46: test_python_printMath .........................   Passed    0.76 sec
+46/65 Test #46: test_python_printMath .........................   Passed    0.62 sec
 test 47
       Start 47: test_python_printRegisteredPackages
 
@@ -178569,7 +178605,7 @@
 47: 	qual
 47: 
 47: 
-47/65 Test #47: test_python_printRegisteredPackages ...........   Passed    0.76 sec
+47/65 Test #47: test_python_printRegisteredPackages ...........   Passed    4.42 sec
 test 48
       Start 48: test_python_printSBML
 
@@ -178595,7 +178631,7 @@
 48:              events: 0
 48: 
 48: 
-48/65 Test #48: test_python_printSBML .........................   Passed    0.78 sec
+48/65 Test #48: test_python_printSBML .........................   Passed    0.61 sec
 test 49
       Start 49: test_python_printsupported
 
@@ -178616,7 +178652,7 @@
 49: 	SBML Level: 3 Version: 1
 49: 	SBML Level: 3 Version: 2
 49: 
-49/65 Test #49: test_python_printsupported ....................   Passed    0.63 sec
+49/65 Test #49: test_python_printsupported ....................   Passed    0.66 sec
 test 50
       Start 50: test_python_printUnits
 
@@ -178636,7 +178672,7 @@
 50: Reaction 1: 
 50: Kinetic Law: second (exponent = -1, multiplier = 1, scale = 0), mole (exponent = 1, multiplier = 1, scale = 0)
 50:         undeclared units: no
-50/65 Test #50: test_python_printUnits ........................   Passed    0.40 sec
+50/65 Test #50: test_python_printUnits ........................   Passed    0.67 sec
 test 51
       Start 51: test_python_promoteParameters
 
@@ -178646,7 +178682,7 @@
 51:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 51: Test timeout computed to be: 3000
 51: [OK] wrote promoteParameters.out.xml
-51/65 Test #51: test_python_promoteParameters .................   Passed    0.52 sec
+51/65 Test #51: test_python_promoteParameters .................   Passed    0.71 sec
 test 52
       Start 52: test_python_readSBML
 
@@ -178658,10 +178694,10 @@
 52: 
 52:             filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
 52:            file size: 3930
-52:       read time (ms): 6.994724273681641
+52:       read time (ms): 7.775306701660156
 52:  validation error(s): 0
 52: 
-52/65 Test #52: test_python_readSBML ..........................   Passed    0.66 sec
+52/65 Test #52: test_python_readSBML ..........................   Passed    0.80 sec
 test 53
       Start 53: test_python_replaceOneFD
 
@@ -178670,7 +178706,7 @@
 53: Environment variables: 
 53:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 53: Test timeout computed to be: 3000
-53/65 Test #53: test_python_replaceOneFD ......................   Passed    0.75 sec
+53/65 Test #53: test_python_replaceOneFD ......................   Passed    0.76 sec
 test 54
       Start 54: test_python_setIdFromNames
 
@@ -178681,11 +178717,11 @@
 54: Test timeout computed to be: 3000
 54: 
 54:             filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
-54:       read time (ms): 6.59765625
-54:     rename time (ms): 0.305419921875
-54:      write time (ms): 6.465087890625
+54:       read time (ms): 3.29150390625
+54:     rename time (ms): 0.3505859375
+54:      write time (ms): 1.951171875
 54: 
-54/65 Test #54: test_python_setIdFromNames ....................   Passed    0.69 sec
+54/65 Test #54: test_python_setIdFromNames ....................   Passed    0.66 sec
 test 55
       Start 55: test_python_setNamesFromIds
 
@@ -178696,11 +178732,11 @@
 55: Test timeout computed to be: 3000
 55: 
 55:             filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
-55:       read time (ms): 2.40966796875
-55:     rename time (ms): 8.8525390625
-55:      write time (ms): 2.427001953125
+55:       read time (ms): 3.014892578125
+55:     rename time (ms): 0.857177734375
+55:      write time (ms): 1.7890625
 55: 
-55/65 Test #55: test_python_setNamesFromIds ...................   Passed    0.69 sec
+55/65 Test #55: test_python_setNamesFromIds ...................   Passed    1.68 sec
 test 56
       Start 56: test_python_unsetAnnotation
 
@@ -178709,7 +178745,7 @@
 56: Environment variables: 
 56:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 56: Test timeout computed to be: 3000
-56/65 Test #56: test_python_unsetAnnotation ...................   Passed    0.78 sec
+56/65 Test #56: test_python_unsetAnnotation ...................   Passed    0.80 sec
 test 57
       Start 57: test_python_unsetNotes
 
@@ -178718,7 +178754,7 @@
 57: Environment variables: 
 57:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 57: Test timeout computed to be: 3000
-57/65 Test #57: test_python_unsetNotes ........................   Passed    0.71 sec
+57/65 Test #57: test_python_unsetNotes ........................   Passed    0.74 sec
 test 58
       Start 58: test_python_validateSBML
 
@@ -178730,15 +178766,15 @@
 58: ---------------------------------------------------------------------------
 58:                  filename : /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
 58:          file size (byte) : 3930
-58:            read time (ms) : 6.880522
-58:         c-check time (ms) : 7.061958
+58:            read time (ms) : 3.521681
+58:         c-check time (ms) : 9.328604
 58:       validation error(s) : 0
 58:     (consistency error(s)): 0
 58:     validation warning(s) : 0
 58:   (consistency warning(s)): 0
 58: ---------------------------------------------------------------------------
 58: Validated 1 files, 1 valid files, 0 invalid files
-58/65 Test #58: test_python_validateSBML ......................   Passed    0.61 sec
+58/65 Test #58: test_python_validateSBML ......................   Passed    0.91 sec
 test 59
       Start 59: test_python_stringInput
 
@@ -178751,7 +178787,7 @@
 59: 
 59: <class 'str'>
 59: <class 'str'>
-59/65 Test #59: test_python_stringInput .......................   Passed    0.51 sec
+59/65 Test #59: test_python_stringInput .......................   Passed    0.63 sec
 test 60
       Start 60: test_python_stripPackage
 
@@ -178761,7 +178797,7 @@
 60:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 60: Test timeout computed to be: 3000
 60: [OK] stripped package 'fbc' from /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/fbc/fbc_example1.xml to stripPackage.out.xml
-60/65 Test #60: test_python_stripPackage ......................   Passed    0.78 sec
+60/65 Test #60: test_python_stripPackage ......................   Passed    2.13 sec
 test 61
       Start 61: test_python_fbc_fbc_example1
 
@@ -178770,7 +178806,7 @@
 61: Environment variables: 
 61:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 61: Test timeout computed to be: 3000
-61/65 Test #61: test_python_fbc_fbc_example1 ..................   Passed    0.61 sec
+61/65 Test #61: test_python_fbc_fbc_example1 ..................   Passed    0.73 sec
 test 62
       Start 62: test_python_groups_groups_example1
 
@@ -178779,7 +178815,7 @@
 62: Environment variables: 
 62:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 62: Test timeout computed to be: 3000
-62/65 Test #62: test_python_groups_groups_example1 ............   Passed    0.76 sec
+62/65 Test #62: test_python_groups_groups_example1 ............   Passed    0.57 sec
 test 63
       Start 63: test_python_layout_example1_L3
 
@@ -178788,7 +178824,7 @@
 63: Environment variables: 
 63:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 63: Test timeout computed to be: 3000
-63/65 Test #63: test_python_layout_example1_L3 ................   Passed    0.74 sec
+63/65 Test #63: test_python_layout_example1_L3 ................   Passed    0.80 sec
 test 64
       Start 64: test_python_layout_example1
 
@@ -178797,7 +178833,7 @@
 64: Environment variables: 
 64:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 64: Test timeout computed to be: 3000
-64/65 Test #64: test_python_layout_example1 ...................   Passed    0.76 sec
+64/65 Test #64: test_python_layout_example1 ...................   Passed    0.79 sec
 test 65
       Start 65: test_python_qual_qual_example1
 
@@ -178806,11 +178842,11 @@
 65: Environment variables: 
 65:  PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
 65: Test timeout computed to be: 3000
-65/65 Test #65: test_python_qual_qual_example1 ................   Passed    0.87 sec
+65/65 Test #65: test_python_qual_qual_example1 ................   Passed    0.66 sec
 
 100% tests passed, 0 tests failed out of 65
 
-Total Test time (real) = 141.77 sec
+Total Test time (real) = 171.84 sec
 make[1]: Leaving directory '/build/reproducible-path/libsbml-5.20.4+dfsg/build'
    create-stamp debian/debhelper-build-stamp
    dh_testroot -O--builddir=build -O--buildsystem=cmake -O--no-parallel
@@ -179399,7 +179435,8 @@
 	mv /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/*/${pyv}/site-packages/* /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/${pyv}/dist-packages ; \
     fi ; \
 done
-+ [ -d /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/ ]
++ for pyv in python3.13
++ '[' -d /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/ ']'
 + mkdir -p /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
 + mv /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/libsbml /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/libsbml.pth /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
 find /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr -type f -name "*.js" -delete
@@ -179430,15 +179467,17 @@
 	rmdir ${madir}/arm-linux-gnueabihf ; \
     fi ; \
 done
-+ + find debian -name arm-linux-gnueabihf -type d
-sort
-+ uniq
-+ [ -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf ]
-+ echo Moving contents of wrong directory debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf into place
+++ uniq
+++ find debian -name arm-linux-gnueabihf -type d
+++ sort
++ for madir in `find debian -name arm-linux-gnueabihf -type d | sort | uniq`
++ '[' -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf ']'
++ echo 'Moving contents of wrong directory debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf into place'
 Moving contents of wrong directory debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf into place
 + mv debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf/perl5 debian/tmp/usr/lib/arm-linux-gnueabihf
 + rmdir debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf
-+ [ -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf/arm-linux-gnueabihf ]
++ for madir in `find debian -name arm-linux-gnueabihf -type d | sort | uniq`
++ '[' -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf/arm-linux-gnueabihf ']'
 find debian -type f -name "_form*" -delete
 make[1]: Leaving directory '/build/reproducible-path/libsbml-5.20.4+dfsg'
    dh_install -O--builddir=build -O--buildsystem=cmake -O--no-parallel
@@ -179491,8 +179530,8 @@
  diversion by libc6 from: /lib/ld-linux-armhf.so.3
 dpkg-shlibdeps: warning: diversions involved - output may be incorrect
  diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged
-dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libsbml5t64/usr/lib/arm-linux-gnueabihf/libsbml.so.5.20.4 found in none of the libraries
 dpkg-shlibdeps: warning: debian/python3-sbml5/usr/lib/python3/dist-packages/libsbml/_libsbml.cpython-313-arm-linux-gnueabihf.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
+dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libsbml5t64/usr/lib/arm-linux-gnueabihf/libsbml.so.5.20.4 found in none of the libraries
 dpkg-shlibdeps: warning: diversions involved - output may be incorrect
  diversion by libc6 from: /lib/ld-linux-armhf.so.3
 dpkg-shlibdeps: warning: diversions involved - output may be incorrect
@@ -179506,19 +179545,19 @@
    dh_gencontrol -O--builddir=build -O--buildsystem=cmake -O--no-parallel
    dh_md5sums -O--builddir=build -O--buildsystem=cmake -O--no-parallel
    dh_builddeb -O--builddir=build -O--buildsystem=cmake -O--no-parallel
-dpkg-deb: building package 'libsbml5-examples' in '../libsbml5-examples_5.20.4+dfsg-0.1_all.deb'.
+dpkg-deb: building package 'libsbml5-perl-doc' in '../libsbml5-perl-doc_5.20.4+dfsg-0.1_all.deb'.
 dpkg-deb: building package 'libsbml5-dev' in '../libsbml5-dev_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'python3-sbml5-dbgsym' in '../python3-sbml5-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-perl-dbgsym' in '../libsbml5-perl-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5t64' in '../libsbml5t64_5.20.4+dfsg-0.1_armhf.deb'.
 dpkg-deb: building package 'libsbml5-java' in '../libsbml5-java_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-octave' in '../libsbml5-octave_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-examples' in '../libsbml5-examples_5.20.4+dfsg-0.1_all.deb'.
 dpkg-deb: building package 'libsbml5-doc' in '../libsbml5-doc_5.20.4+dfsg-0.1_all.deb'.
-dpkg-deb: building package 'libsbml5-java-dbgsym' in '../libsbml5-java-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5t64' in '../libsbml5t64_5.20.4+dfsg-0.1_armhf.deb'.
 dpkg-deb: building package 'libsbml5t64-dbgsym' in '../libsbml5t64-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-perl' in '../libsbml5-perl_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-perl-dbgsym' in '../libsbml5-perl-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-java-dbgsym' in '../libsbml5-java-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
 dpkg-deb: building package 'python3-sbml5' in '../python3-sbml5_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'python3-sbml5-dbgsym' in '../python3-sbml5-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-octave' in '../libsbml5-octave_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-perl-doc' in '../libsbml5-perl-doc_5.20.4+dfsg-0.1_all.deb'.
+dpkg-deb: building package 'libsbml5-perl' in '../libsbml5-perl_5.20.4+dfsg-0.1_armhf.deb'.
 dpkg-deb: building package 'python3-sbml5-doc' in '../python3-sbml5-doc_5.20.4+dfsg-0.1_all.deb'.
  dpkg-genbuildinfo --build=binary -O../libsbml_5.20.4+dfsg-0.1_armhf.buildinfo
  dpkg-genchanges --build=binary -O../libsbml_5.20.4+dfsg-0.1_armhf.changes
@@ -179528,12 +179567,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: including full source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/8523/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/2815 and its subdirectories
-I: Current time: Sat Jan 11 18:24:51 -12 2025
-I: pbuilder-time-stamp: 1736663091
+I: removing directory /srv/workspace/pbuilder/8523 and its subdirectories
+I: Current time: Mon Jan 13 01:15:25 +14 2025
+I: pbuilder-time-stamp: 1736680525