Diff of the two buildlogs: -- --- b1/build.log 2024-07-10 13:54:31.500460993 +0000 +++ b2/build.log 2024-07-10 14:02:04.693164482 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jul 10 00:55:24 -12 2024 -I: pbuilder-time-stamp: 1720616124 +I: Current time: Thu Jul 11 03:54:58 +14 2024 +I: pbuilder-time-stamp: 1720619698 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying unforce-cxxflags.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/17650/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/D01_modify_environment starting +debug: Running on virt64z. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 10 13:55 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='c847b372c041477b878ff23b7452c3b8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='17650' - PS1='# ' - PS2='> ' + INVOCATION_ID=6ae81da312b84b54ab28956ea0f9c335 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=13933 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RyWdp0CP/pbuilderrc_g3NH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RyWdp0CP/b1 --logfile b1/build.log libbpp-core_2.4.1-13.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RyWdp0CP/pbuilderrc_g8Jo --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RyWdp0CP/b2 --logfile b2/build.log libbpp-core_2.4.1-13.dsc' + SUDO_GID=110 + SUDO_UID=103 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux cbxi4a 6.1.0-22-armmp #1 SMP Debian 6.1.94-1 (2024-06-21) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-22-arm64 #1 SMP Debian 6.1.94-1 (2024-06-21) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 22:35 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/17650/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -168,7 +200,7 @@ Get: 52 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf debhelper all 13.16 [891 kB] -Fetched 29.9 MB in 6s (4710 kB/s) +Fetched 29.9 MB in 0s (82.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19404 files and directories currently installed.) @@ -399,7 +431,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libbpp-core-2.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbpp-core_2.4.1-13_source.changes +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbpp-core-2.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbpp-core_2.4.1-13_source.changes dpkg-buildpackage: info: source package libbpp-core dpkg-buildpackage: info: source version 2.4.1-13 dpkg-buildpackage: info: source distribution unstable @@ -430,8 +466,8 @@ -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) --- Configuring done (7.8s) --- Generating done (2.4s) +-- Configuring done (0.6s) +-- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: @@ -442,7 +478,7 @@ -- Build files have been written to: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf dh_auto_build - cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/libbpp-core-2.4.1 -B/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks @@ -455,21 +491,23 @@ make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/src /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-core-shared.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f src/CMakeFiles/bpp-core-shared.dir/build.make src/CMakeFiles/bpp-core-shared.dir/build make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/bpp-core-static.dir/build.make src/CMakeFiles/bpp-core-static.dir/build +make -f src/CMakeFiles/bpp-core-shared.dir/build.make src/CMakeFiles/bpp-core-shared.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' [ 0%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/BppApplication.cpp -[ 0%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.cpp [ 0%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/App/ApplicationTools.cpp.o +[ 0%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o +[ 1%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/App/BppApplication.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/App/BppApplication.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/BppApplication.cpp cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/App/ApplicationTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/App/ApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/App/ApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.cpp -[ 1%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp -[ 2%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/App/BppApplication.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/App/ApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.cpp cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/App/BppApplication.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/App/BppApplication.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/App/BppApplication.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/BppApplication.cpp +[ 1%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp +[ 2%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/App/NumCalcApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp [ 2%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/BppString.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/BppString.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/BppString.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/BppString.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/BppString.cpp In file included from /usr/include/c++/13/vector:72, @@ -481,10 +519,23 @@ /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ +[ 2%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/BppString.cpp /usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/../Io/FileTools.h:46, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Exceptions.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Exceptions.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Exceptions.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Exceptions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Exceptions.cpp +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 In file included from /usr/include/c++/13/vector:66: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'static std::vector > bpp::NumCalcApplicationTools::getVector(const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:90:25: @@ -508,25 +559,8 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 3%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graph/GlobalGraph.cpp -[ 4%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/ColorTools.cpp -[ 4%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/App/NumCalcApplicationTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp -[ 4%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigGraphicDevice.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigGraphicDevice.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigGraphicDevice.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigGraphicDevice.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Fig/XFigGraphicDevice.cpp -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/../Io/FileTools.h:46, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 +[ 4%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Exceptions.cpp In file included from /usr/include/c++/13/vector:66: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'static std::vector > bpp::NumCalcApplicationTools::getVector(const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:90:25: @@ -550,40 +584,58 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 4%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/BppString.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/BppString.cpp -[ 5%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Exceptions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Exceptions.cpp -[ 6%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o +[ 4%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graph/GlobalGraph.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graph/GlobalGraph.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graph/GlobalGraph.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graph/GlobalGraph.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graph/GlobalGraph.cpp +[ 4%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Graph/GlobalGraph.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graph/GlobalGraph.cpp +[ 5%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/ColorTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/ColorTools.cpp +[ 6%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/ColorTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/ColorTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/ColorTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/ColorTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/ColorTools.cpp +[ 6%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigGraphicDevice.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong 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src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp +[ 8%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o -MF 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/build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Svg/SvgGraphicDevice.cpp +[ 15%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Svg/SvgGraphicDevice.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Svg/SvgGraphicDevice.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Svg/SvgGraphicDevice.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Graphics/Svg/SvgGraphicDevice.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Svg/SvgGraphicDevice.cpp -[ 11%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Fig/XFigLaTeXFontManager.cpp -[ 12%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o +[ 15%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp +[ 16%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppODiscreteDistributionFormat.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp -[ 12%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigPostscriptFontManager.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigPostscriptFontManager.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigPostscriptFontManager.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Fig/XFigPostscriptFontManager.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Fig/XFigPostscriptFontManager.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/../VectorExceptions.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/../VectorTools.h:43, @@ -597,8 +649,19 @@ | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -[ 13%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Font/Font.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Font/Font.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Font/Font.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Font/Font.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Font/Font.cpp +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/../VectorExceptions.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/../VectorTools.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/DiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/IoDiscreteDistributionFactory.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:122:23: @@ -628,125 +691,190 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 13%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/GraphicDevice.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/GraphicDevice.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/GraphicDevice.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/GraphicDevice.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/GraphicDevice.cpp -[ 14%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/DvipsColorSet.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/DvipsColorSet.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/DvipsColorSet.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/DvipsColorSet.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Latex/DvipsColorSet.cpp -[ 14%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppOParametrizableFormat.cpp.o +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:122:23: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:127:23: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:149:21: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:150:21: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:176:23: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 17%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppOParametrizableFormat.cpp +[ 17%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Io/BppOParametrizableFormat.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/PgfGraphicDevice.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/PgfGraphicDevice.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Graphics/Latex/PgfGraphicDevice.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Graphics/Latex/PgfGraphicDevice.cpp -[ 15%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Io/FileTools.cpp.o +[ 17%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Io/FileTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT 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src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp +[ 43%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp -[ 29%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o +[ 43%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp -[ 30%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o +[ 43%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp +[ 44%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp +[ 45%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp +[ 45%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp +[ 45%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/../VectorExceptions.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/../VectorTools.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/../Numeric/Prob/DiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/IoDiscreteDistributionFactory.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../../Text/TextTools.h:49, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Constraints.h:50, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Parameter.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../ParameterList.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Parametrizable.h:49, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmStateAlphabet.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -[ 30%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:122:23: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + inlined from 'bpp::AutoCorrelationTransitionMatrix::AutoCorrelationTransitionMatrix(const bpp::HmmStateAlphabet*, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:59:29: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:127:23: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:149:21: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:150:21: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'virtual bpp::DiscreteDistribution* bpp::BppODiscreteDistributionFormat::read(const std::string&, bool)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:176:23: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + inlined from 'bpp::AutoCorrelationTransitionMatrix::AutoCorrelationTransitionMatrix(const bpp::HmmStateAlphabet*, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:59:29: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 31%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o +[ 45%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.cpp +[ 46%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../../Text/TextTools.h:49, @@ -774,16 +902,14 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 31%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o +[ 46%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.cpp -[ 32%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Io/BppOParametrizableFormat.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/BppOParametrizableFormat.cpp -[ 33%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o +[ 47%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp +[ 47%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp +[ 48%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp -[ 33%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Io/FileTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Io/FileTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Io/FileTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Io/FileTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/FileTools.cpp -[ 33%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp In file included from /usr/include/c++/13/bits/stl_algo.h:61, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, @@ -794,8 +920,6 @@ /usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ -[ 33%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Io/IoDiscreteDistributionFactory.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Io/IoDiscreteDistributionFactory.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Io/IoDiscreteDistributionFactory.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Io/IoDiscreteDistributionFactory.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Io/IoDiscreteDistributionFactory.cpp /usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1812 | __insertion_sort(_RandomAccessIterator __first, @@ -809,17 +933,8 @@ /usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../../Text/TextTools.h:49, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Constraints.h:50, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Parameter.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../ParameterList.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/Functions.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:45: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ +[ 48%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp In file included from /usr/include/c++/13/bits/stl_algo.h:61, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, @@ -830,13 +945,33 @@ /usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ -[ 34%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParameterAliasable.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParameterAliasable.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParameterAliasable.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParameterAliasable.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/AbstractParameterAliasable.cpp /usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1812 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1854 | __final_insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../../Text/TextTools.h:49, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Constraints.h:50, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Parameter.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../ParameterList.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/Functions.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:45: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:191:39: @@ -885,11 +1020,77 @@ /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1854 | __final_insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +In file included from /usr/include/c++/13/bits/stl_algo.h:61, + from /usr/include/c++/13/algorithm:61, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:46, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:40: +/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1812 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1918 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1918 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::LowMemoryRescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:237:11: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1950 | std::__final_insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::LowMemoryRescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:246:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1950 | std::__final_insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: /usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -910,6 +1111,23 @@ inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: /usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -918,7 +1136,7 @@ | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ @@ -929,21 +1147,65 @@ In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1918 | __introsort_loop(_RandomAccessIterator __first, +In file included from /usr/include/c++/13/bits/stl_algo.h:61, + from /usr/include/c++/13/algorithm:61, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:46, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:40: +/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +[ 49%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1812 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1854 | __final_insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../../Text/TextTools.h:49, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Constraints.h:50, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Parameter.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../ParameterList.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/Functions.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:45: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +[ 49%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/NumTools.cpp +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:191:39: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:214:35: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: + inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ @@ -954,7 +1216,7 @@ In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: + inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: /usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -963,7 +1225,7 @@ | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: + inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ @@ -974,10 +1236,18 @@ In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: + inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1918 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, inlined from 'void bpp::LowMemoryRescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:237:11: @@ -1004,12 +1274,101 @@ /usr/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1950 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 35%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +[ 50%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp -[ 35%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/NumTools.cpp.o +[ 50%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/NumTools.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/NumTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/NumTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/NumTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/NumTools.cpp -[ 36%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.cpp +[ 51%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.cpp +In file included from /usr/include/c++/13/bits/stl_algo.h:61, + from /usr/include/c++/13/algorithm:61, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:46, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:40: +/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1812 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 In file included from /usr/include/c++/13/bits/stl_algo.h:61, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, @@ -1025,6 +1384,80 @@ 1812 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +[ 52%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Parameter.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.cpp +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1918 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::RescaledHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:583:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::RescaledHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:583:7: +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::RescaledHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:472:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::RescaledHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:472:7: +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +[ 52%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterExceptions.cpp +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::RescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:239:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, + inlined from 'void bpp::RescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:239:7: +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +[ 53%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterList.cpp /usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1918 | __introsort_loop(_RandomAccessIterator __first, @@ -1093,20 +1526,20 @@ /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 36%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterExceptions.cpp.o +[ 53%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp +[ 53%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterExceptions.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterExceptions.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterExceptions.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterExceptions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterExceptions.cpp -[ 37%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterList.cpp.o +[ 54%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterList.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterList.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterList.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/ParameterList.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterList.cpp -[ 37%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParametrizable.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParametrizable.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParametrizable.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AbstractParametrizable.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/AbstractParametrizable.cpp -[ 37%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o +[ 54%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp -[ 38%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AdaptiveKernelDensityEstimation.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AdaptiveKernelDensityEstimation.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AdaptiveKernelDensityEstimation.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AdaptiveKernelDensityEstimation.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/AdaptiveKernelDensityEstimation.cpp -[ 39%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o +[ 55%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp +[ 55%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp +[ 56%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp -[ 39%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp In file included from /usr/include/c++/13/map:62, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, @@ -1120,6 +1553,8 @@ /usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 56%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp In file included from /usr/include/c++/13/map:63: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', inlined from 'bpp::ConstantDistribution::ConstantDistribution(double)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:55:23: @@ -1130,8 +1565,53 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -[ 39%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'bpp::ConstantDistribution::ConstantDistribution(double)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:55:23: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'virtual void bpp::ConstantDistribution::fireParameterChanged(const bpp::ParameterList&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:79:23: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +[ 57%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp +[ 57%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp +In file included from /usr/include/c++/13/map:62, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../NumTools.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:40: +/usr/include/c++/13/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = double; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]': +/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 57%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp +In file included from /usr/include/c++/13/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'bpp::ConstantDistribution::ConstantDistribution(double)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:55:23: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', inlined from 'bpp::ConstantDistribution::ConstantDistribution(double)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:55:23: /usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 @@ -1150,12 +1630,10 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -[ 40%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o +[ 58%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp -[ 40%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AutoParameter.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AutoParameter.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AutoParameter.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/AutoParameter.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/AutoParameter.cpp -[ 41%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/DataTable.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/DataTable.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/DataTable.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/DataTable.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/DataTable.cpp +[ 59%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43, @@ -1219,22 +1697,93 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 41%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'void bpp::DirichletDiscreteDistribution::applyParameters()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:105:21: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 42%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MultipleDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::getValueCategory(bpp::Vdouble&) const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:169:17: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::getValueCategory(bpp::Vdouble&) const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:171:15: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::rand() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:257:17: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::rand() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:260:15: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::randC() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:274:17: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::randC() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:277:15: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::VVdouble bpp::DirichletDiscreteDistribution::getCategories() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:204:17: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::VVdouble bpp::DirichletDiscreteDistribution::getCategories() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:223:21: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::VVdouble bpp::DirichletDiscreteDistribution::getCategories() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:240:17: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 59%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'void bpp::DirichletDiscreteDistribution::applyParameters()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:105:21: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 59%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp +[ 60%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp -[ 42%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o +[ 60%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp +[ 61%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp +[ 61%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp -[ 43%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp -[ 43%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/AbstractOptimizer.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/AbstractOptimizer.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/AbstractOptimizer.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/AbstractOptimizer.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.cpp In file included from /usr/include/c++/13/map:62, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, @@ -1248,6 +1797,8 @@ /usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 62%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43: @@ -1255,6 +1806,64 @@ /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:87:27: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:91:31: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:93:28: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:116:22: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:125:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:126:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:130:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:135:22: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/map:62, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, @@ -1268,6 +1877,76 @@ /usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/map:63: +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'void bpp::MixtureOfDiscreteDistributions::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:194:30: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', + inlined from 'void bpp::MixtureOfDiscreteDistributions::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:204:30: +/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 514 | std::tuple(__k), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 515 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'static std::vector bpp::MapTools::getKeys(const std::map&) [with Key = double; T = double; Cmp = bpp::AbstractDiscreteDistribution::Order]' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../../Utils/MapTools.h:68:19, + inlined from 'void bpp::MixtureOfDiscreteDistributions::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:236:111: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +[ 62%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp +In file included from /usr/include/c++/13/map:62, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../NumTools.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:40: +/usr/include/c++/13/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = double; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]': +/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::MixtureOfDiscreteDistributions& bpp::MixtureOfDiscreteDistributions::operator=(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:132:22: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:117:22: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:117:22: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/map:63: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:87:27: @@ -1326,6 +2005,29 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const std::vector&, const std::vector >&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:69:22: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In file included from /usr/include/c++/13/map:62, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../NumTools.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:40: +/usr/include/c++/13/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = double; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]': +/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 + 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const std::vector&, const std::vector >&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:69:22: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43: @@ -1364,6 +2066,8 @@ /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1292 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +[ 62%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:117:22: /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 @@ -1374,21 +2078,19 @@ /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1292 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 43%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const std::vector&, const std::vector >&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:69:22: /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1292 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +[ 63%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const std::vector&, const std::vector >&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:69:22: /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1292 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 44%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BfgsMultiDimensions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BfgsMultiDimensions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BfgsMultiDimensions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BfgsMultiDimensions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/BfgsMultiDimensions.cpp -[ 45%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/Simplex.cpp.o +[ 64%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/Simplex.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/Simplex.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/Simplex.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/Simplex.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, @@ -1417,6 +2119,24 @@ | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.h:43, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'static std::vector bpp::MapTools::getKeys(const std::map&) [with Key = double; T = double; Cmp = bpp::AbstractDiscreteDistribution::Order]' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../../Utils/MapTools.h:68:19, + inlined from 'virtual void bpp::SimpleDiscreteDistribution::discretize()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp:302:111: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:65:21: @@ -1429,8 +2149,6 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BrentOneDimension.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BrentOneDimension.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BrentOneDimension.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/BrentOneDimension.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/BrentOneDimension.cpp In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:65:21: /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 @@ -1448,12 +2166,33 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.h:45, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:154:24: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:65:21: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:85:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:132:21: @@ -1466,44 +2205,153 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:65:21: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:85:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 64%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:132:21: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:154:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 65%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:132:21: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:154:24: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 65%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp -[ 46%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.cpp -[ 47%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o +[ 66%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && 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src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FivePointsNumericalDerivative.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FivePointsNumericalDerivative.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FivePointsNumericalDerivative.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/FivePointsNumericalDerivative.cpp -[ 51%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o +[ 73%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp +[ 73%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp +[ 73%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp -[ 52%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o +[ 74%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp -[ 53%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FunctionTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FunctionTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FunctionTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/FunctionTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/FunctionTools.cpp -[ 53%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/GoldenSectionSearch.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/GoldenSectionSearch.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/GoldenSectionSearch.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/GoldenSectionSearch.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/GoldenSectionSearch.cpp -[ 53%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/StatTools.cpp.o +[ 74%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp +In file included from /usr/include/c++/13/bits/stl_algo.h:61, + from /usr/include/c++/13/algorithm:61, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:43: +/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = bpp::StatTools::PValue_; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, + | ^~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': +/usr/include/c++/13/bits/stl_algo.h:1792:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1792 | __unguarded_linear_insert(_RandomAccessIterator __last, + | ^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1812 | __insertion_sort(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1918 | __introsort_loop(_RandomAccessIterator __first, + | ^~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 +/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.h:44, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:40: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {bpp::StatTools::PValue_}; _Tp = bpp::StatTools::PValue_; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {bpp::StatTools::PValue_}; _Tp = bpp::StatTools::PValue_; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = bpp::StatTools::PValue_; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'static std::vector bpp::StatTools::computeFdr(const std::vector&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:52:28: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'static std::vector bpp::StatTools::computeFdr(const std::vector&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:54:7: +/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1947 | std::__introsort_loop(__first, __last, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ + 1948 | std::__lg(__last - __first) * 2, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1949 | __comp); + | ~~~~~~~ +In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', + inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, + inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, + inlined from 'static std::vector bpp::StatTools::computeFdr(const std::vector&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:54:7: +/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 1864 | std::__insertion_sort(__first, __last, __comp); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +[ 75%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp +[ 75%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/StatTools.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/StatTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/StatTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/Stat/StatTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp In file included from /usr/include/c++/13/bits/stl_algo.h:61, from /usr/include/c++/13/algorithm:61, @@ -1562,12 +2410,10 @@ /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 54%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/VectorTools.cpp.o +[ 76%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/VectorTools.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/VectorTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/VectorTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Numeric/VectorTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp -[ 54%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/MetaOptimizer.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/MetaOptimizer.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/MetaOptimizer.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/MetaOptimizer.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/MetaOptimizer.cpp -[ 54%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.cpp +[ 76%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/../Text/TextTools.h:49, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:41: @@ -1589,40 +2435,90 @@ /usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 1292 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 55%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/NestedStringTokenizer.cpp.o +[ 77%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/NestedStringTokenizer.cpp +In file included from /usr/include/c++/13/vector:72, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/../Text/TextTools.h:49, + from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:41: +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 + 445 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ +/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 +In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', + inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, + inlined from 'static std::vector > bpp::VectorTools::breaks(const std::vector >&, unsigned int)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:60:18: +/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/vector:66: +In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', + inlined from 'static std::vector > bpp::VectorTools::breaks(const std::vector >&, unsigned int)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:62:16: +/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 + 1292 | _M_realloc_insert(end(), __x); + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +[ 77%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Text/KeyvalTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.cpp +[ 78%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/NestedStringTokenizer.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/NestedStringTokenizer.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Text/NestedStringTokenizer.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Text/NestedStringTokenizer.cpp.o -c 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Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/TextTools.cpp +[ 79%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/StringTokenizer.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/StringTokenizer.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Text/StringTokenizer.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Text/StringTokenizer.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/StringTokenizer.cpp -[ 56%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Text/TextTools.cpp.o +[ 79%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Utils/AttributesTools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 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src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/NewtonBacktrackOneDimension.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/NewtonBacktrackOneDimension.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/NewtonBacktrackOneDimension.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/NewtonBacktrackOneDimension.cpp -[ 57%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Utils/AttributesTools.cpp.o +[ 80%] Building CXX object src/CMakeFiles/bpp-core-shared.dir/Bpp/Utils/AttributesTools.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_core_shared_EXPORTS -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-shared.dir/Bpp/Utils/AttributesTools.cpp.o -MF CMakeFiles/bpp-core-shared.dir/Bpp/Utils/AttributesTools.cpp.o.d -o CMakeFiles/bpp-core-shared.dir/Bpp/Utils/AttributesTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Utils/AttributesTools.cpp -[ 57%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/NewtonOneDimension.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/NewtonOneDimension.cpp.o -MF 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src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/Operators/ComputationTree.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/Operators/ComputationTree.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/Operators/ComputationTree.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/Operators/ComputationTree.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Operators/ComputationTree.cpp -[ 60%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/OptimizationStopCondition.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/OptimizationStopCondition.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/OptimizationStopCondition.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/OptimizationStopCondition.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/OptimizationStopCondition.cpp +/usr/bin/ranlib libbpp-core.a +make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +[ 82%] Built target bpp-core-static cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_symlink_library libbpp-core.so.4.1.0 libbpp-core.so.4 libbpp-core.so make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 60%] Built target bpp-core-shared +[ 82%] Built target bpp-core-shared make -f test/CMakeFiles/test_bfgs.dir/build.make test/CMakeFiles/test_bfgs.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +make -f test/CMakeFiles/test_dAGraphObs.dir/build.make test/CMakeFiles/test_dAGraphObs.dir/depend cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test 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'/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_derivative1.dir/DependInfo.cmake "--color=" +make -f test/CMakeFiles/test_distributions.dir/build.make test/CMakeFiles/test_distributions.dir/depend +make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test 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test/CMakeFiles/test_dAGraphObs.dir/build +make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +make -f test/CMakeFiles/test_distributions.dir/build.make test/CMakeFiles/test_distributions.dir/build +make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 60%] Building CXX object test/CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o +[ 82%] Building CXX object test/CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o -MF CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o.d -o CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_derivative1.cpp +[ 82%] Building CXX object test/CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o -MF CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o.d -o CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_bfgs.cpp -[ 60%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/PowellMultiDimensions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/PowellMultiDimensions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/PowellMultiDimensions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/PowellMultiDimensions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/PowellMultiDimensions.cpp +[ 82%] Building CXX object test/CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -MF CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o.d -o CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_dAGraphObs.cpp +[ 82%] Building CXX object test/CMakeFiles/test_distributions.dir/test_distributions.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_distributions.dir/test_distributions.cpp.o -MF CMakeFiles/test_distributions.dir/test_distributions.cpp.o.d -o CMakeFiles/test_distributions.dir/test_distributions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_distributions.cpp In file included from /usr/include/c++/13/map:62, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/../AbstractParametrizable.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:45, @@ -1634,76 +2530,32 @@ /usr/include/c++/13/bits/stl_tree.h:2210:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' changed in GCC 7.1 2210 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 61%] Linking CXX executable test_bfgs -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bfgs.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o -o test_bfgs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 82%] Linking CXX executable test_distributions +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_distributions.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_distributions.dir/test_distributions.cpp.o -o test_distributions -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 61%] Built target test_bfgs -make -f test/CMakeFiles/test_dAGraphObs.dir/build.make test/CMakeFiles/test_dAGraphObs.dir/depend +[ 82%] Built target test_distributions +make -f test/CMakeFiles/test_downhill.dir/build.make test/CMakeFiles/test_downhill.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_dAGraphObs.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_downhill.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_dAGraphObs.dir/build.make test/CMakeFiles/test_dAGraphObs.dir/build +make -f test/CMakeFiles/test_downhill.dir/build.make test/CMakeFiles/test_downhill.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 61%] Building CXX object test/CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -MF CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o.d -o CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_dAGraphObs.cpp -[ 62%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ReparametrizationFunctionWrapper.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ReparametrizationFunctionWrapper.cpp.o -MF 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CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/SimpleMultiDimensions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/SimpleMultiDimensions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/SimpleMultiDimensions.cpp -[ 63%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.cpp -[ 63%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/ThreePointsNumericalDerivative.cpp -[ 64%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/TwoPointsNumericalDerivative.cpp -[ 65%] Linking CXX executable test_dAGraphObs -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dAGraphObs.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -o test_dAGraphObs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 83%] Building CXX object test/CMakeFiles/test_downhill.dir/test_downhill.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_downhill.dir/test_downhill.cpp.o -MF CMakeFiles/test_downhill.dir/test_downhill.cpp.o.d -o CMakeFiles/test_downhill.dir/test_downhill.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_downhill.cpp +[ 84%] Linking CXX executable test_bfgs +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bfgs.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_bfgs.dir/test_bfgs.cpp.o -o test_bfgs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 65%] Built target test_dAGraphObs -make -f test/CMakeFiles/test_derivative1.dir/build.make test/CMakeFiles/test_derivative1.dir/depend +[ 84%] Built target test_bfgs +make -f test/CMakeFiles/test_eigen.dir/build.make test/CMakeFiles/test_eigen.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_derivative1.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_eigen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_derivative1.dir/build.make test/CMakeFiles/test_derivative1.dir/build +make -f test/CMakeFiles/test_eigen.dir/build.make test/CMakeFiles/test_eigen.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 65%] Building CXX object test/CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o -MF CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o.d -o CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_derivative1.cpp -[ 65%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp -[ 66%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp -[ 66%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../../Text/TextTools.h:49, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Constraints.h:50, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Parameter.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../ParameterList.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Parametrizable.h:49, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmStateAlphabet.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::AutoCorrelationTransitionMatrix::AutoCorrelationTransitionMatrix(const bpp::HmmStateAlphabet*, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:59:29: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::AutoCorrelationTransitionMatrix::AutoCorrelationTransitionMatrix(const bpp::HmmStateAlphabet*, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:59:29: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 66%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/HmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.cpp +[ 85%] Building CXX object test/CMakeFiles/test_eigen.dir/test_eigen.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_eigen.dir/test_eigen.cpp.o -MF CMakeFiles/test_eigen.dir/test_eigen.cpp.o.d -o CMakeFiles/test_eigen.dir/test_eigen.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_eigen.cpp In file included from /usr/include/c++/13/map:62, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/../AbstractParametrizable.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:45, @@ -1713,373 +2565,40 @@ /usr/include/c++/13/bits/stl_tree.h:2210:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' changed in GCC 7.1 2210 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 67%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp -[ 68%] Linking CXX executable test_derivative1 +[ 85%] Linking CXX executable test_downhill +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_downhill.dir/link.txt --verbose=1 +[ 86%] Linking CXX executable test_derivative1 cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_derivative1.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_downhill.dir/test_downhill.cpp.o -o test_downhill -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_derivative1.dir/test_derivative1.cpp.o -o test_derivative1 -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 68%] Built target test_derivative1 -make -f test/CMakeFiles/test_distributions.dir/build.make test/CMakeFiles/test_distributions.dir/depend -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_distributions.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_distributions.dir/build.make test/CMakeFiles/test_distributions.dir/build -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 68%] Building CXX object test/CMakeFiles/test_distributions.dir/test_distributions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_distributions.dir/test_distributions.cpp.o -MF CMakeFiles/test_distributions.dir/test_distributions.cpp.o.d -o CMakeFiles/test_distributions.dir/test_distributions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_distributions.cpp -[ 68%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp -In file included from /usr/include/c++/13/bits/stl_algo.h:61, - from /usr/include/c++/13/algorithm:61, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:46, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:40: -/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1812 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1918 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 68%] Linking CXX executable test_distributions -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_distributions.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_distributions.dir/test_distributions.cpp.o -o test_distributions -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 86%] Built target test_downhill make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 68%] Built target test_distributions -make -f test/CMakeFiles/test_downhill.dir/build.make test/CMakeFiles/test_downhill.dir/depend +make -f test/CMakeFiles/test_gradient.dir/build.make test/CMakeFiles/test_gradient.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_downhill.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_gradient.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_downhill.dir/build.make test/CMakeFiles/test_downhill.dir/build +make -f test/CMakeFiles/test_gradient.dir/build.make test/CMakeFiles/test_gradient.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 69%] Building CXX object test/CMakeFiles/test_downhill.dir/test_downhill.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_downhill.dir/test_downhill.cpp.o -MF CMakeFiles/test_downhill.dir/test_downhill.cpp.o.d -o CMakeFiles/test_downhill.dir/test_downhill.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_downhill.cpp -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../../Text/TextTools.h:49, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Constraints.h:50, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../Parameter.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/../ParameterList.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../Function/Functions.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:45: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:191:39: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:214:35: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:219:7: -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/bits/stl_algo.h:61, - from /usr/include/c++/13/algorithm:61, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:46, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:40: -/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1812 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1854 | __final_insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:463:7: -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1918 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'void bpp::LogsumHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.cpp:571:7: -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::LowMemoryRescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:237:11: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1950 | std::__final_insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::LowMemoryRescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.cpp:246:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1950 | std::__final_insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 70%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp -[ 70%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/NumTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/NumTools.cpp -[ 70%] Linking CXX executable test_downhill -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_downhill.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_downhill.dir/test_downhill.cpp.o -o test_downhill -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 70%] Built target test_downhill -make -f test/CMakeFiles/test_eigen.dir/build.make test/CMakeFiles/test_eigen.dir/depend +[ 86%] Built target test_derivative1 +[ 87%] Building CXX object test/CMakeFiles/test_gradient.dir/test_gradient.cpp.o +make -f test/CMakeFiles/test_graphObs.dir/build.make test/CMakeFiles/test_graphObs.dir/depend +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_gradient.dir/test_gradient.cpp.o -MF CMakeFiles/test_gradient.dir/test_gradient.cpp.o.d -o CMakeFiles/test_gradient.dir/test_gradient.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_gradient.cpp make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_eigen.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_graphObs.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_eigen.dir/build.make test/CMakeFiles/test_eigen.dir/build +make -f test/CMakeFiles/test_graphObs.dir/build.make test/CMakeFiles/test_graphObs.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 71%] Building CXX object test/CMakeFiles/test_eigen.dir/test_eigen.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_eigen.dir/test_eigen.cpp.o -MF CMakeFiles/test_eigen.dir/test_eigen.cpp.o.d -o CMakeFiles/test_eigen.dir/test_eigen.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_eigen.cpp -[ 72%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Parameter.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.cpp -In file included from /usr/include/c++/13/bits/stl_algo.h:61, - from /usr/include/c++/13/algorithm:61, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/../VectorTools.h:54, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:46, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:40: -/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1812 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1918 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::RescaledHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:583:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::RescaledHmmLikelihood::computeD2Forward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:583:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 72%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterExceptions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterExceptions.cpp -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::RescaledHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:472:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::RescaledHmmLikelihood::computeDForward_() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:472:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::RescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:239:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator > >; _Compare = greater]' at /usr/include/c++/13/bits/stl_algo.h:4894:18, - inlined from 'void bpp::RescaledHmmLikelihood::computeForward_()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.cpp:239:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 72%] Linking CXX executable test_eigen +[ 88%] Building CXX object test/CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -MF CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o.d -o CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_graphObs.cpp +[ 88%] Linking CXX executable test_eigen cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_eigen.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_eigen.dir/test_eigen.cpp.o -o test_eigen -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 -[ 73%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/ParameterList.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterList.cpp make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 73%] Built target test_eigen -make -f test/CMakeFiles/test_gradient.dir/build.make test/CMakeFiles/test_gradient.dir/depend -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_gradient.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_gradient.dir/build.make test/CMakeFiles/test_gradient.dir/build +[ 88%] Built target test_eigen +make -f test/CMakeFiles/test_matrices.dir/build.make test/CMakeFiles/test_matrices.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 73%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.cpp -[ 74%] Building CXX object test/CMakeFiles/test_gradient.dir/test_gradient.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_gradient.dir/test_gradient.cpp.o -MF CMakeFiles/test_gradient.dir/test_gradient.cpp.o.d -o CMakeFiles/test_gradient.dir/test_gradient.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_gradient.cpp +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_matrices.dir/DependInfo.cmake "--color=" In file included from /usr/include/c++/13/map:62, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/../AbstractParametrizable.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:45, @@ -2091,240 +2610,115 @@ /usr/include/c++/13/bits/stl_tree.h:2210:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' changed in GCC 7.1 2210 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 74%] Linking CXX executable test_gradient -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_gradient.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_gradient.dir/test_gradient.cpp.o -o test_gradient -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 74%] Built target test_gradient -make -f test/CMakeFiles/test_graphObs.dir/build.make test/CMakeFiles/test_graphObs.dir/depend -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_graphObs.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_graphObs.dir/build.make test/CMakeFiles/test_graphObs.dir/build -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 75%] Building CXX object test/CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -MF CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o.d -o CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_graphObs.cpp -[ 76%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/BetaDiscreteDistribution.cpp -[ 76%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ConstantDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp -In file included from /usr/include/c++/13/map:62, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../NumTools.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:40: -/usr/include/c++/13/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = double; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]': -/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'bpp::ConstantDistribution::ConstantDistribution(double)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:55:23: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'bpp::ConstantDistribution::ConstantDistribution(double)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:55:23: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'virtual void bpp::ConstantDistribution::fireParameterChanged(const bpp::ParameterList&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ConstantDistribution.cpp:79:23: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -make -f test/CMakeFiles/test_matrices.dir/build.make test/CMakeFiles/test_matrices.dir/depend -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_matrices.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_matrices.dir/build.make test/CMakeFiles/test_matrices.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 77%] Building CXX object test/CMakeFiles/test_matrices.dir/test_matrices.cpp.o +[ 89%] Building CXX object test/CMakeFiles/test_matrices.dir/test_matrices.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_matrices.dir/test_matrices.cpp.o -MF CMakeFiles/test_matrices.dir/test_matrices.cpp.o.d -o CMakeFiles/test_matrices.dir/test_matrices.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_matrices.cpp -[ 78%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp -[ 78%] Linking CXX executable test_matrices -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_matrices.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_matrices.dir/test_matrices.cpp.o -o test_matrices -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 89%] Linking CXX executable test_gradient +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_gradient.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_gradient.dir/test_gradient.cpp.o -o test_gradient -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 78%] Built target test_matrices +[ 89%] Built target test_gradient make -f test/CMakeFiles/test_mva.dir/build.make test/CMakeFiles/test_mva.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_mva.dir/DependInfo.cmake "--color=" -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MultipleDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_mva.dir/build.make test/CMakeFiles/test_mva.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 79%] Building CXX object test/CMakeFiles/test_mva.dir/test_mva.cpp.o +[ 90%] Building CXX object test/CMakeFiles/test_mva.dir/test_mva.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_mva.dir/test_mva.cpp.o -MF CMakeFiles/test_mva.dir/test_mva.cpp.o.d -o CMakeFiles/test_mva.dir/test_mva.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_mva.cpp -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::getValueCategory(bpp::Vdouble&) const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:169:17: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::getValueCategory(bpp::Vdouble&) const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:171:15: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::rand() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:257:17: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::rand() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:260:15: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::randC() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:274:17: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'virtual bpp::Vdouble bpp::DirichletDiscreteDistribution::randC() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:277:15: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::VVdouble bpp::DirichletDiscreteDistribution::getCategories() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:204:17: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::VVdouble bpp::DirichletDiscreteDistribution::getCategories() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:223:21: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::VVdouble bpp::DirichletDiscreteDistribution::getCategories() const' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:240:17: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'void bpp::DirichletDiscreteDistribution::applyParameters()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DirichletDiscreteDistribution.cpp:105:21: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 79%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.cpp -[ 79%] Linking CXX executable test_graphObs -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graphObs.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -o test_graphObs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 90%] Linking CXX executable test_matrices +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_matrices.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_matrices.dir/test_matrices.cpp.o -o test_matrices -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 79%] Built target test_graphObs +[ 90%] Built target test_matrices make -f test/CMakeFiles/test_numconstants.dir/build.make test/CMakeFiles/test_numconstants.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_numconstants.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_numconstants.dir/build.make test/CMakeFiles/test_numconstants.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 80%] Building CXX object test/CMakeFiles/test_numconstants.dir/test_numconstants.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_numconstants.dir/test_numconstants.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_numconstants.dir/test_numconstants.cpp.o -MF CMakeFiles/test_numconstants.dir/test_numconstants.cpp.o.d -o CMakeFiles/test_numconstants.dir/test_numconstants.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_numconstants.cpp -[ 80%] Linking CXX executable test_mva +[ 91%] Linking CXX executable test_mva cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mva.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mva.dir/test_mva.cpp.o -o test_mva -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 80%] Built target test_mva +[ 91%] Built target test_mva make -f test/CMakeFiles/test_powell.dir/build.make test/CMakeFiles/test_powell.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_powell.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_powell.dir/build.make test/CMakeFiles/test_powell.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 80%] Building CXX object test/CMakeFiles/test_powell.dir/test_powell.cpp.o +[ 91%] Building CXX object test/CMakeFiles/test_powell.dir/test_powell.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_powell.dir/test_powell.cpp.o -MF CMakeFiles/test_powell.dir/test_powell.cpp.o.d -o CMakeFiles/test_powell.dir/test_powell.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_powell.cpp -[ 80%] Linking CXX executable test_numconstants +[ 92%] Linking CXX executable test_dAGraphObs +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dAGraphObs.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_dAGraphObs.dir/test_dAGraphObs.cpp.o -o test_dAGraphObs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 92%] Linking CXX executable test_numconstants cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_numconstants.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_numconstants.dir/test_numconstants.cpp.o -o test_numconstants -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 80%] Built target test_numconstants +[ 92%] Built target test_numconstants make -f test/CMakeFiles/test_range.dir/build.make test/CMakeFiles/test_range.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_range.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_range.dir/build.make test/CMakeFiles/test_range.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 80%] Building CXX object test/CMakeFiles/test_range.dir/test_range.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_range.dir/test_range.cpp.o -MF CMakeFiles/test_range.dir/test_range.cpp.o.d -o CMakeFiles/test_range.dir/test_range.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_range.cpp -[ 81%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp -[ 82%] Linking CXX executable test_powell -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_powell.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_powell.dir/test_powell.cpp.o -o test_powell -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 82%] Built target test_powell +[ 92%] Building CXX object test/CMakeFiles/test_range.dir/test_range.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_range.dir/test_range.cpp.o -MF CMakeFiles/test_range.dir/test_range.cpp.o.d -o CMakeFiles/test_range.dir/test_range.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_range.cpp +[ 92%] Built target test_dAGraphObs make -f test/CMakeFiles/test_reparametrization.dir/build.make test/CMakeFiles/test_reparametrization.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_reparametrization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_reparametrization.dir/build.make test/CMakeFiles/test_reparametrization.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 82%] Building CXX object test/CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o +[ 92%] Building CXX object test/CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o -MF CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o.d -o CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_reparametrization.cpp -[ 83%] Linking CXX executable test_range -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_range.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_range.dir/test_range.cpp.o -o test_range -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 93%] Linking CXX executable test_reparametrization +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reparametrization.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o -o test_reparametrization -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 83%] Built target test_range +[ 93%] Built target test_reparametrization make -f test/CMakeFiles/test_sample.dir/build.make test/CMakeFiles/test_sample.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_sample.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_sample.dir/build.make test/CMakeFiles/test_sample.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 83%] Building CXX object test/CMakeFiles/test_sample.dir/test_sample.cpp.o +[ 93%] Building CXX object test/CMakeFiles/test_sample.dir/test_sample.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_sample.dir/test_sample.cpp.o -MF CMakeFiles/test_sample.dir/test_sample.cpp.o.d -o CMakeFiles/test_sample.dir/test_sample.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_sample.cpp -[ 83%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GaussianDiscreteDistribution.cpp -[ 84%] Linking CXX executable test_reparametrization -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reparametrization.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_reparametrization.dir/test_reparametrization.cpp.o -o test_reparametrization -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 94%] Linking CXX executable test_powell +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_powell.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_powell.dir/test_powell.cpp.o -o test_powell -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +[ 94%] Linking CXX executable test_graphObs +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graphObs.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_graphObs.dir/test_graphObs.cpp.o -o test_graphObs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 84%] Built target test_reparametrization +[ 94%] Built target test_powell make -f test/CMakeFiles/test_simplex.dir/build.make test/CMakeFiles/test_simplex.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_simplex.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' make -f test/CMakeFiles/test_simplex.dir/build.make test/CMakeFiles/test_simplex.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 84%] Building CXX object test/CMakeFiles/test_simplex.dir/test_simplex.cpp.o +make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +[ 94%] Building CXX object test/CMakeFiles/test_simplex.dir/test_simplex.cpp.o cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_simplex.dir/test_simplex.cpp.o -MF CMakeFiles/test_simplex.dir/test_simplex.cpp.o.d -o CMakeFiles/test_simplex.dir/test_simplex.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_simplex.cpp +[ 94%] Built target test_graphObs +make -f test/CMakeFiles/test_stats.dir/build.make test/CMakeFiles/test_stats.dir/depend +make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_stats.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +make -f test/CMakeFiles/test_stats.dir/build.make test/CMakeFiles/test_stats.dir/build +make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +[ 94%] Building CXX object test/CMakeFiles/test_stats.dir/test_stats.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_stats.dir/test_stats.cpp.o -MF CMakeFiles/test_stats.dir/test_stats.cpp.o.d -o CMakeFiles/test_stats.dir/test_stats.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_stats.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorExceptions.h:47, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.h:43, @@ -2337,6 +2731,19 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 95%] Linking CXX executable test_range +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_range.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_range.dir/test_range.cpp.o -o test_range -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 +make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +[ 95%] Built target test_range +make -f test/CMakeFiles/test_text_tools.dir/build.make test/CMakeFiles/test_text_tools.dir/depend +make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_text_tools.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +make -f test/CMakeFiles/test_text_tools.dir/build.make test/CMakeFiles/test_text_tools.dir/build +make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' +[ 95%] Building CXX object test/CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o -MF CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o.d -o CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_text_tools.cpp In file included from /usr/include/c++/13/vector:72, from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.h:45, from /build/reproducible-path/libbpp-core-2.4.1/test/test_simplex.cpp:40: @@ -2348,418 +2755,47 @@ /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 85%] Linking CXX executable test_sample +[ 96%] Linking CXX executable test_sample cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_sample.dir/test_sample.cpp.o -o test_sample -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 85%] Built target test_sample -make -f test/CMakeFiles/test_stats.dir/build.make test/CMakeFiles/test_stats.dir/depend +[ 96%] Built target test_sample +make -f test/CMakeFiles/test_treeGraphObs.dir/build.make test/CMakeFiles/test_treeGraphObs.dir/depend make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_stats.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_treeGraphObs.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_stats.dir/build.make test/CMakeFiles/test_stats.dir/build +make -f test/CMakeFiles/test_treeGraphObs.dir/build.make test/CMakeFiles/test_treeGraphObs.dir/build make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 85%] Building CXX object test/CMakeFiles/test_stats.dir/test_stats.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_stats.dir/test_stats.cpp.o -MF CMakeFiles/test_stats.dir/test_stats.cpp.o.d -o CMakeFiles/test_stats.dir/test_stats.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_stats.cpp -[ 86%] Linking CXX executable test_simplex +[ 96%] Building CXX object test/CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o +cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o -MF CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o.d -o CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_treeGraphObs.cpp +[ 97%] Linking CXX executable test_simplex cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simplex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_simplex.dir/test_simplex.cpp.o -o test_simplex -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 86%] Built target test_simplex -make -f test/CMakeFiles/test_text_tools.dir/build.make test/CMakeFiles/test_text_tools.dir/depend -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_text_tools.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_text_tools.dir/build.make test/CMakeFiles/test_text_tools.dir/build -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 86%] Building CXX object test/CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o -MF CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o.d -o CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_text_tools.cpp -[ 86%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp -In file included from /usr/include/c++/13/map:62, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../NumTools.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:40: -/usr/include/c++/13/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = double; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]': -/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 87%] Linking CXX executable test_stats +[ 97%] Built target test_simplex +[ 98%] Linking CXX executable test_stats cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stats.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_stats.dir/test_stats.cpp.o -o test_stats -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 87%] Built target test_stats -make -f test/CMakeFiles/test_treeGraphObs.dir/build.make test/CMakeFiles/test_treeGraphObs.dir/depend -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbpp-core-2.4.1 /build/reproducible-path/libbpp-core-2.4.1/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/CMakeFiles/test_treeGraphObs.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -make -f test/CMakeFiles/test_treeGraphObs.dir/build.make test/CMakeFiles/test_treeGraphObs.dir/build -make[3]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 87%] Building CXX object test/CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT test/CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o -MF CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o.d -o CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/test/test_treeGraphObs.cpp -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:87:27: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:91:31: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:93:28: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:116:22: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:125:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:126:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:130:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'void bpp::InvariantMixedDiscreteDistribution::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.cpp:135:22: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 88%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp -In file included from /usr/include/c++/13/map:62, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/../AbstractParametrizable.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../Function/Functions.h:45, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../NumTools.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:40: -/usr/include/c++/13/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = double; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]': -/usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/map:63: -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'void bpp::MixtureOfDiscreteDistributions::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:194:30: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = double; _Compare = bpp::AbstractDiscreteDistribution::Order; _Alloc = std::allocator >]', - inlined from 'void bpp::MixtureOfDiscreteDistributions::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:204:30: -/usr/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, bpp::AbstractDiscreteDistribution::Order, std::allocator > >::const_iterator' changed in GCC 7.1 - 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 514 | std::tuple(__k), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 515 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'static std::vector bpp::MapTools::getKeys(const std::map&) [with Key = double; T = double; Cmp = bpp::AbstractDiscreteDistribution::Order]' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../../Utils/MapTools.h:68:19, - inlined from 'void bpp::MixtureOfDiscreteDistributions::updateDistribution()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:236:111: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::MixtureOfDiscreteDistributions& bpp::MixtureOfDiscreteDistributions::operator=(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:132:22: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:117:22: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const bpp::MixtureOfDiscreteDistributions&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:117:22: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const std::vector&, const std::vector >&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:69:22: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::MixtureOfDiscreteDistributions::MixtureOfDiscreteDistributions(const std::vector&, const std::vector >&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.cpp:69:22: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 88%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp -[ 89%] Linking CXX executable test_text_tools +[ 98%] Built target test_stats +[ 99%] Linking CXX executable test_text_tools cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_text_tools.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_text_tools.dir/test_text_tools.cpp.o -o test_text_tools -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 89%] Built target test_text_tools -[ 90%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/Simplex.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.h:45, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:65:21: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:85:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorExceptions.h:47, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../VectorTools.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/DiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.h:43, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'static std::vector bpp::MapTools::getKeys(const std::map&) [with Key = double; T = double; Cmp = bpp::AbstractDiscreteDistribution::Order]' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/../../Utils/MapTools.h:68:19, - inlined from 'virtual void bpp::SimpleDiscreteDistribution::discretize()' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp:302:111: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:65:21: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::Simplex::Simplex(const std::vector&, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:85:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:132:21: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:154:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:132:21: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'bpp::Simplex::Simplex(size_t, short unsigned int, bool, const std::string&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.cpp:154:24: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 90%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.cpp -[ 91%] Linking CXX executable test_treeGraphObs +[ 99%] Built target test_text_tools +[100%] Linking CXX executable test_treeGraphObs cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_treeGraphObs.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_treeGraphObs.dir/test_treeGraphObs.cpp.o -o test_treeGraphObs -Wl,-rpath,/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src ../src/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' -[ 91%] Built target test_treeGraphObs -[ 92%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/UniformDiscreteDistribution.cpp -[ 92%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/ContingencyTableGenerator.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/ContingencyTableGenerator.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/ContingencyTableGenerator.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/ContingencyTableGenerator.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Random/ContingencyTableGenerator.cpp -[ 93%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/RandomTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/RandomTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/RandomTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/RandomTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp -[ 93%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01K.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01K.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01K.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01K.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Random/Uniform01K.cpp -[ 94%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01QD.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01QD.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01QD.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01QD.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Random/Uniform01QD.cpp -[ 94%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01WH.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01WH.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01WH.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Random/Uniform01WH.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Random/Uniform01WH.cpp -/build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:50:68: warning: conversion from 'time_t' {aka 'long long int'} to 'long int' may change value [-Wconversion] - 50 | RandomFactory* RandomTools::DEFAULT_GENERATOR = new Uniform01K(time(NULL)); - | ~~~~^~~~~~ -[ 95%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/ContingencyTableTest.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/ContingencyTableTest.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/ContingencyTableTest.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/ContingencyTableTest.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/ContingencyTableTest.cpp -[ 95%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.cpp -[ 96%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp -[ 96%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp -[ 96%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/Stat/StatTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp -In file included from /usr/include/c++/13/bits/stl_algo.h:61, - from /usr/include/c++/13/algorithm:61, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:43: -/usr/include/c++/13/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = bpp::StatTools::PValue_; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, - | ^~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': -/usr/include/c++/13/bits/stl_algo.h:1792:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1792 | __unguarded_linear_insert(_RandomAccessIterator __last, - | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1812 | __insertion_sort(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1918 | __introsort_loop(_RandomAccessIterator __first, - | ^~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 -/usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.h:44, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:40: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {bpp::StatTools::PValue_}; _Tp = bpp::StatTools::PValue_; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {bpp::StatTools::PValue_}; _Tp = bpp::StatTools::PValue_; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = bpp::StatTools::PValue_; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'static std::vector bpp::StatTools::computeFdr(const std::vector&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:52:28: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'static std::vector bpp::StatTools::computeFdr(const std::vector&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:54:7: -/usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1947 | std::__introsort_loop(__first, __last, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ - 1948 | std::__lg(__last - __first) * 2, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1949 | __comp); - | ~~~~~~~ -In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', - inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, - inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, - inlined from 'static std::vector bpp::StatTools::computeFdr(const std::vector&)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/StatTools.cpp:54:7: -/usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 1864 | std::__insertion_sort(__first, __last, __comp); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -[ 97%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Numeric/VectorTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp -[ 97%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/KeyvalTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.cpp -In file included from /usr/include/c++/13/vector:72, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/../Text/TextTools.h:49, - from /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:41: -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 - 445 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -/usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 -In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]', - inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, - inlined from 'static std::vector > bpp::VectorTools::breaks(const std::vector >&, unsigned int)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:60:18: -/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/vector:66: -In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]', - inlined from 'static std::vector > bpp::VectorTools::breaks(const std::vector >&, unsigned int)' at /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.cpp:62:16: -/usr/include/c++/13/bits/stl_vector.h:1292:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 - 1292 | _M_realloc_insert(end(), __x); - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 98%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/NestedStringTokenizer.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/NestedStringTokenizer.cpp -[ 98%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/StringTokenizer.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/StringTokenizer.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/StringTokenizer.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/StringTokenizer.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/StringTokenizer.cpp -[ 99%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Text/TextTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Text/TextTools.cpp -[ 99%] Building CXX object src/CMakeFiles/bpp-core-static.dir/Bpp/Utils/AttributesTools.cpp.o -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/build/reproducible-path/libbpp-core-2.4.1/src -g -O2 -ffile-prefix-map=/build/reproducible-path/libbpp-core-2.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT src/CMakeFiles/bpp-core-static.dir/Bpp/Utils/AttributesTools.cpp.o -MF CMakeFiles/bpp-core-static.dir/Bpp/Utils/AttributesTools.cpp.o.d -o CMakeFiles/bpp-core-static.dir/Bpp/Utils/AttributesTools.cpp.o -c /build/reproducible-path/libbpp-core-2.4.1/src/Bpp/Utils/AttributesTools.cpp -[100%] Linking CXX static library libbpp-core.a -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/bpp-core-static.dir/cmake_clean_target.cmake -cd /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-core-static.dir/link.txt --verbose=1 -/usr/bin/ar qc libbpp-core.a 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bpp-core-static +[100%] Built target test_treeGraphObs make[2]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' dh_auto_test - cd obj-arm-linux-gnueabihf && make -j3 test ARGS\+=--verbose ARGS\+=-j3 + cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=--verbose ARGS\+=-j4 make[1]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j3 +/usr/bin/ctest --force-new-ctest-process --verbose -j4 UpdateCTestConfiguration from :/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/DartConfiguration.tcl Parse Config file:/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/DartConfiguration.tcl @@ -2789,6 +2825,24 @@ 3: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_derivative1 3: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 3: Test timeout computed to be: 1500 +test 4 + Start 4: test_distributions + +4: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_distributions +4: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test +4: Test timeout computed to be: 1500 +1: 38 +1: Step x y z Function Time +1: 0 0 0 0 38.000000 0.000000 +1: Optimizing... / 14 5 -2 3 0.000000 0.000000 +1: Optimizing... / 5!!! Function increase !!! +1: !!! Optimization might have failed. Try to reparametrize your function to remove constraints. +1: 17 5.00077 -2.00031 3.00046 0.000001 0.000000 +1: x=5.000769 +1: y=-2.000308 +1: z=3.000461 +1: f=0.000001 +1: 0.00153852915943812445 2: Creating node zero. 2: digraph myTestDirGrObs { 2: 0; @@ -2869,32 +2923,20 @@ 2: TRUE 2: 2: Test passed -1: 38 -1: Step x y z Function Time -1: 0 0 0 0 38.000000 0.000000 -1: Optimizing... / 14 5 -2 3 0.000000 0.000000 -1: Optimizing... / 5!!! Function increase !!! -1: !!! Optimization might have failed. Try to reparametrize your function to remove constraints. -1: 17 5.00077 -2.00031 3.00046 0.000001 0.000000 -1: x=5.000769 -1: y=-2.000308 -1: z=3.000461 -1: f=0.000001 -1: 0.00153852915943812445 - 1/19 Test #1: test_bfgs ........................ Passed 0.06 sec - 2/19 Test #2: test_dAGraphObs .................. Passed 0.05 sec -test 4 - Start 4: test_distributions - -4: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_distributions -4: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test -4: Test timeout computed to be: 1500 + 1/19 Test #1: test_bfgs ........................ Passed 0.03 sec + 2/19 Test #2: test_dAGraphObs .................. Passed 0.03 sec test 5 Start 5: test_downhill 5: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_downhill 5: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 5: Test timeout computed to be: 1500 +test 6 + Start 6: test_eigen + +6: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_eigen +6: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test +6: Test timeout computed to be: 1500 4: Testing Exponential distribution with lambda = 0.2: 4: Testing 2 classes. 4: Test sum of probabilities: ok @@ -3016,59 +3058,6 @@ 4: Test equality of probabilities: ok 4: Testing 97 classes. 4: Test sum of probabilities: ok -5: 38 -5: Step x y z Function Time -5: 0 0 0 0 38.000000 0.000000 -5: Optimizing... / 13 0.2 0 0 36.040000 0.000000 -5: Optimizing... - 46 0.2 -0.4 0.2 33.440000 0.000000 -5: Optimizing... \ 79 0.4 -0.4 0.4 30.480000 0.000000 -5: Optimizing... - 1012 0.8 -0.8 0.2 26.920000 0.000000 -5: Optimizing... / 1315 1 -1.6 0.8 21.000000 0.000000 -5: Optimizing... - 1618 1.8 -2 1 14.240000 0.000000 -5: Optimizing... \ 1921 2.8 -3.6 1.2 10.640000 0.000000 -5: Optimizing... - 2223 2.93333 -4 1.8 9.711111 0.000000 -5: Optimizing... - 2426 2.93333 -4 1.8 9.711111 0.000000 -5: Optimizing... \ 2729 2.93333 -4 1.8 9.711111 0.000000 -5: Optimizing... - 3032 3.52099 -4.31111 2.11852 8.305722 0.000000 -5: Optimizing... / 3335 3.52099 -4.31111 2.11852 8.305722 0.000000 -5: Optimizing... - 3638 3.52099 -4.31111 2.11852 8.305722 0.000000 -5: Optimizing... \ 3941 4.25171 -4.43457 1.99465 7.497780 0.000000 -5: Optimizing... - 4243 3.60508 -3.65432 2.02016 5.642670 0.000000 -5: Optimizing... - 4446 3.60508 -3.65432 2.02016 5.642670 0.000000 -5: Optimizing... \ 4749 5.39095 -4.01481 2.24691 4.779457 0.000000 -5: Optimizing... - 5052 5.06872 -3.34815 2.74691 1.886279 0.000000 -5: Optimizing... / 5354 4.91248 -1.92099 2.07572 0.868195 0.000000 -5: Optimizing... \ 5556 4.91248 -1.92099 2.07572 0.868195 0.000000 -5: Optimizing... / 5758 4.91248 -1.92099 2.07572 0.868195 0.000000 -5: Optimizing... \ 5961 4.91248 -1.92099 2.07572 0.868195 0.000000 -5: Optimizing... - 6264 4.93604 -2.48718 2.57406 0.422859 0.000000 -5: Optimizing... / 6567 4.93604 -2.48718 2.57406 0.422859 0.000000 -5: Optimizing... - 6870 5.23618 -1.63158 2.55964 0.385428 0.000000 -5: Optimizing... \ 7172 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... / 7375 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... - 7678 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... \ 7981 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... - 8283 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... - 8486 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... \ 8788 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... / 8991 4.86427 -2.03655 2.9586 0.021473 0.000000 -5: Optimizing... - 9294 5.07694 -1.94377 3.00846 0.009154 0.000000 -5: Optimizing... \ 9597 5.07045 -2.02994 2.97016 0.006750 0.000000 -5: Optimizing... - 98100 5.07045 -2.02994 2.97016 0.006750 0.000000 -5: Optimizing... / 101103 4.952 -2.01795 2.9893 0.002741 0.000000 -5: Optimizing... - 104106 5.03751 -1.98392 3.01103 0.001787 0.000000 -5: Optimizing... \ 107109 4.99588 -2.01745 3.03576 0.001600 0.000000 -5: Optimizing... - 110112 5.03279 -2.01819 2.99109 0.001485 0.000000 -5: Optimizing... / 113115 4.98703 -2.01223 3.00096 0.000319 0.000000 -5: Optimizing... - 116118 4.98703 -2.01223 3.00096 0.000319 0.000000 -5: Optimizing... \ 119121 4.98703 -2.01223 3.00096 0.000319 0.000000 -5: Optimizing... - 122124 4.98703 -2.01223 3.00096 0.000319 0.000000 -5: Optimizing... / 125126 5.00769 -2.00495 3.01147 0.000215 0.000000 -5: Optimizing... \ 127129 5.00769 -2.00495 3.01147 0.000215 0.000000 -5: Optimizing... - 130132 4.99637 -2.00775 2.99101 0.000154 0.000000 -5: Optimizing... / 133135 5.00578 -1.99641 3.00255 0.000053 0.000000 -5: Optimizing... - 136138 4.99421 -2.00165 3.00224 0.000041 0.000000 -5: Optimizing... \ 139141 4.99421 -2.00165 3.00224 0.000041 0.000000 4: Test equality of probabilities: ok 4: Testing Truncated Exponential distribution with lambda = 0.2 and t = 0.1: 4: Testing 2 classes. @@ -3121,79 +3110,6 @@ 4: Test equality of probabilities: ok 4: Testing 82 classes. 4: Test sum of probabilities: ok -5: Optimizing... - 142144 4.99872 -2.00412 2.99714 0.000027 0.000000 -5: Optimizing... / 145147 5.00225 -1.99974 3.00201 0.000009 0.000000 -5: Optimizing... - 148150 5.00225 -1.99974 3.00201 0.000009 0.000000 -5: Optimizing... \ 151153 5.00225 -1.99974 3.00201 0.000009 0.000000 -5: Optimizing... - 154156 4.99944 -2.00277 2.9996 0.000008 0.000000 -5: Optimizing... / 157158 4.99858 -2.00031 2.99929 0.000003 0.000000 -5: Optimizing... \ 159161 4.99858 -2.00031 2.99929 0.000003 0.000000 -5: Optimizing... - 162164 5.00126 -2.00038 3.00068 0.000002 0.000000 -5: Optimizing... / 165167 5.00127 -2.00056 2.99951 0.000002 0.000000 -5: Optimizing... - 168170 5.00083 -1.99924 2.99994 0.000001 0.000000 -5: Optimizing... \ 171172 4.99985 -2.00018 2.99967 0.000000 0.000000 -5: Optimizing... / 173175 4.99985 -2.00018 2.99967 0.000000 0.000000 -5: Optimizing... - 176178 4.99985 -2.00018 2.99967 0.000000 0.000000 -5: Optimizing... \ 179181 4.99985 -2.00018 2.99967 0.000000 0.000000 -5: Optimizing... - 182183 4.99985 -2.00018 2.99967 0.000000 0.000000 -5: Optimizing... - 184186 4.99985 -2.00018 2.99967 0.000000 0.000000 -5: Optimizing... \ 187188 5.00032 -2.00015 3.00002 0.000000 0.000000 -5: Optimizing... / 189191 5.00032 -2.00015 3.00002 0.000000 0.000000 -5: Optimizing... - 192194 5.00017 -1.99985 2.99974 0.000000 0.000000 -5: Optimizing... \ 195197 4.99996 -2.00008 2.99983 0.000000 0.000000 -5: Optimizing... - 198200 4.99994 -1.99998 3.00005 0.000000 0.000000 -5: Optimizing... / 201203 4.99994 -1.99998 3.00005 0.000000 0.000000 -5: Optimizing... - 204206 4.99994 -1.99998 3.00005 0.000000 0.000000 -5: Optimizing... \ 207209 4.99994 -1.99998 3.00005 0.000000 0.000000 -5: Optimizing... - 210212 4.99994 -1.99998 3.00005 0.000000 0.000000 -5: Optimizing... / 213214 5.00001 -1.99999 2.99994 0.000000 0.000000 -5: Optimizing... \ 215217 5.00001 -1.99999 2.99994 0.000000 0.000000 -5: Optimizing... - 218220 5.00003 -2.00002 2.99999 0.000000 0.000000 -5: Optimizing... / 221223 4.99998 -1.99998 3.00002 0.000000 0.000000 -5: Optimizing... - 224226 4.99998 -1.99998 3.00002 0.000000 0.000000 -5: Optimizing... \ 227228 5.00001 -1.99999 2.99998 0.000000 0.000000 -5: Optimizing... / 229231 5.00001 -1.99999 2.99998 0.000000 0.000000 -5: Optimizing... - 232234 5.00001 -2.00001 2.99999 0.000000 0.000000 -5: Optimizing... \ 235237 4.99999 -1.99999 3 0.000000 0.000000 -5: Optimizing... - 238239 4.99999 -1.99999 3 0.000000 0.000000 -5: Optimizing... - 240241 4.99999 -1.99999 3 0.000000 0.000000 -5: Optimizing... - 242244 4.99999 -1.99999 3 0.000000 0.000000 -5: Optimizing... / 245247 5 -2 3 0.000000 0.000000 -5: Optimizing... - 248250 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 251253 5 -2 3 0.000000 0.000000 -5: Optimizing... - 254255 5 -2 3 0.000000 0.000000 -5: Optimizing... - 256258 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 259261 5 -2 3 0.000000 0.000000 -5: Optimizing... - 262264 5 -2 3 0.000000 0.000000 -5: Optimizing... / 265267 5 -2 3 0.000000 0.000000 -5: Optimizing... - 268270 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 271273 5 -2 3 0.000000 0.000000 -5: Optimizing... - 274276 5 -2 3 0.000000 0.000000 -5: Optimizing... / 277279 5 -2 3 0.000000 0.000000 -5: Optimizing... - 280281 5 -2 3 0.000000 0.000000 -5: Optimizing... - 282283 5 -2 3 0.000000 0.000000 -5: Optimizing... - 284286 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 287289 5 -2 3 0.000000 0.000000 -5: Optimizing... - 290292 5 -2 3 0.000000 0.000000 -5: Optimizing... / 293294 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 295297 5 -2 3 0.000000 0.000000 -5: Optimizing... - 298300 5 -2 3 0.000000 0.000000 -5: Optimizing... / 301303 5 -2 3 0.000000 0.000000 -5: Optimizing... - 304306 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 307309 5 -2 3 0.000000 0.000000 -5: Optimizing... - 310312 5 -2 3 0.000000 0.000000 -5: Optimizing... / 313315 5 -2 3 0.000000 0.000000 -5: Optimizing... - 316318 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 319321 5 -2 3 0.000000 0.000000 -5: Optimizing... - 322323 5 -2 3 0.000000 0.000000 -5: Optimizing... - 324326 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 327329 5 -2 3 0.000000 0.000000 -5: Optimizing... - 330332 5 -2 3 0.000000 0.000000 -5: Optimizing... / 333334 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 335337 5 -2 3 0.000000 0.000000 -5: Optimizing... - 338340 5 -2 3 0.000000 0.000000 -5: Optimizing... / 341343 5 -2 3 0.000000 0.000000 -5: Optimizing... - 344346 5 -2 3 0.000000 0.000000 4: Test equality of probabilities: ok 4: Testing 87 classes. 4: Test sum of probabilities: ok @@ -3271,78 +3187,6 @@ 4: Test equality of probabilities: ok 4: Testing 7 classes. 4: Test sum of probabilities: ok -5: Optimizing... \ 347349 5 -2 3 0.000000 0.000000 -5: Optimizing... - 350352 5 -2 3 0.000000 0.000000 -5: Optimizing... / 353355 5 -2 3 0.000000 0.000000 -5: Optimizing... - 356357 5 -2 3 0.000000 0.000000 -5: Optimizing... - 358360 5 -2 3 0.000000 0.000000 -5: Optimizing... / 361363 5 -2 3 0.000000 0.000000 -5: Optimizing... - 364366 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 367369 5 -2 3 0.000000 0.000000 -5: Optimizing... - 370372 5 -2 3 0.000000 0.000000 -5: Optimizing... / 373374 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 375377 5 -2 3 0.000000 0.000000 -5: Optimizing... - 378380 5 -2 3 0.000000 0.000000 -5: Optimizing... / 381383 5 -2 3 0.000000 0.000000 -5: Optimizing... - 384386 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 387389 5 -2 3 0.000000 0.000000 -5: Optimizing... - 390392 5 -2 3 0.000000 0.000000 -5: Optimizing... / 393395 5 -2 3 0.000000 0.000000 -5: Optimizing... - 396398 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 399401 5 -2 3 0.000000 0.000000 -5: Optimizing... - 402404 5 -2 3 0.000000 0.000000 -5: Optimizing... / 405407 5 -2 3 0.000000 0.000000 -5: Optimizing... - 408410 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 411413 5 -2 3 0.000000 0.000000 -5: Optimizing... - 414416 5 -2 3 0.000000 0.000000 -5: Optimizing... / 417419 5 -2 3 0.000000 0.000000 -5: Optimizing... - 420422 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 423424 5 -2 3 0.000000 0.000000 -5: Optimizing... / 425427 5 -2 3 0.000000 0.000000 -5: Optimizing... - 428430 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 431432 5 -2 3 0.000000 0.000000 -5: Optimizing... / 433435 5 -2 3 0.000000 0.000000 -5: Optimizing... - 436438 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 439441 5 -2 3 0.000000 0.000000 -5: Optimizing... - 442444 5 -2 3 0.000000 0.000000 -5: Optimizing... / 445447 5 -2 3 0.000000 0.000000 -5: Optimizing... - 448450 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 451453 5 -2 3 0.000000 0.000000 -5: Optimizing... - 454456 5 -2 3 0.000000 0.000000 -5: Optimizing... / 457458 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 459460 5 -2 3 0.000000 0.000000 -5: Optimizing... / 461462 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 463465 5 -2 3 0.000000 0.000000 -5: Optimizing... - 466468 5 -2 3 0.000000 0.000000 -5: Optimizing... / 469471 5 -2 3 0.000000 0.000000 -5: Optimizing... - 472474 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 475477 5 -2 3 0.000000 0.000000 -5: Optimizing... - 478480 5 -2 3 0.000000 0.000000 -5: Optimizing... / 481483 5 -2 3 0.000000 0.000000 -5: Optimizing... - 484486 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 487489 5 -2 3 0.000000 0.000000 -5: Optimizing... - 490492 5 -2 3 0.000000 0.000000 -5: Optimizing... / 493494 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 495497 5 -2 3 0.000000 0.000000 -5: Optimizing... - 498500 5 -2 3 0.000000 0.000000 -5: Optimizing... / 501503 5 -2 3 0.000000 0.000000 -5: Optimizing... - 504506 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 507509 5 -2 3 0.000000 0.000000 -5: Optimizing... - 510512 5 -2 3 0.000000 0.000000 -5: Optimizing... / 513515 5 -2 3 0.000000 0.000000 -5: Optimizing... - 516518 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 519520 5 -2 3 0.000000 0.000000 -5: Optimizing... / 521523 5 -2 3 0.000000 0.000000 -5: Optimizing... - 524526 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 527529 5 -2 3 0.000000 0.000000 -5: Optimizing... - 530532 5 -2 3 0.000000 0.000000 -5: Optimizing... / 533535 5 -2 3 0.000000 0.000000 -5: Optimizing... - 536538 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 539541 5 -2 3 0.000000 0.000000 -5: Optimizing... - 542544 5 -2 3 0.000000 0.000000 -5: Optimizing... / 545547 5 -2 3 0.000000 0.000000 -5: Optimizing... - 548549 5 -2 3 0.000000 0.000000 -5: Optimizing... - 550551 5 -2 3 0.000000 0.000000 4: Test equality of probabilities: ok 4: Testing 12 classes. 4: Test sum of probabilities: ok @@ -3439,36 +3283,6 @@ 4: Test sum of probabilities: ok 4: Test equality of probabilities: ok 4: Testing 67 classes. -5: Optimizing... - 552554 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 555557 5 -2 3 0.000000 0.000000 -5: Optimizing... - 558560 5 -2 3 0.000000 0.000000 -5: Optimizing... / 561563 5 -2 3 0.000000 0.000000 -5: Optimizing... - 564566 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 567569 5 -2 3 0.000000 0.000000 -5: Optimizing... - 570572 5 -2 3 0.000000 0.000000 -5: Optimizing... / 573581 5 -2 3 0.000000 0.000000 -5: Optimizing... - 582584 5 -2 3 0.000000 0.000000 -5: Optimizing... / 585587 5 -2 3 0.000000 0.000000 -5: Optimizing... - 588589 5 -2 3 0.000000 0.000000 -5: Optimizing... - 590592 5 -2 3 0.000000 0.000000 -5: Optimizing... / 593595 5 -2 3 0.000000 0.000000 -5: Optimizing... - 596598 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 599601 5 -2 3 0.000000 0.000000 -5: Optimizing... - 602604 5 -2 3 0.000000 0.000000 -5: Optimizing... / 605607 5 -2 3 0.000000 0.000000 -5: Optimizing... - 608610 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 611613 5 -2 3 0.000000 0.000000 -5: Optimizing... - 614616 5 -2 3 0.000000 0.000000 -5: Optimizing... / 617619 5 -2 3 0.000000 0.000000 -5: Optimizing... - 620621 5 -2 3 0.000000 0.000000 -5: Optimizing... - 622624 5 -2 3 0.000000 0.000000 -5: Optimizing... / 625626 5 -2 3 0.000000 0.000000 -5: Optimizing... \ 627629 5 -2 3 0.000000 0.000000 -5: x=5.000000 -5: y=-2.000000 -5: z=3.000000 -5: f=0.000000 -5: 0.00000000000000222045 4: Test sum of probabilities: ok 4: Test equality of probabilities: ok 4: Testing 72 classes. @@ -3501,20 +3315,242 @@ 4: 0.475042 0.4750416 4: 0.730634 0.7306344 4: 1 1 - 3/19 Test #4: test_distributions ............... Passed 0.07 sec - 4/19 Test #5: test_downhill .................... Passed 0.06 sec -test 6 - Start 6: test_eigen - -6: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_eigen -6: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test -6: Test timeout computed to be: 1500 +5: 38 +5: Step x y z Function Time +5: 0 0 0 0 38.000000 0.000000 +5: Optimizing... / 13 0.2 0 0 36.040000 0.000000 +5: Optimizing... - 46 0.2 -0.4 0.2 33.440000 0.000000 +5: Optimizing... \ 79 0.4 -0.4 0.4 30.480000 0.000000 +5: Optimizing... - 1012 0.8 -0.8 0.2 26.920000 0.000000 +5: Optimizing... / 1315 1 -1.6 0.8 21.000000 0.000000 +5: Optimizing... - 1618 1.8 -2 1 14.240000 0.000000 +5: Optimizing... \ 1921 2.8 -3.6 1.2 10.640000 0.000000 +5: Optimizing... - 2223 2.93333 -4 1.8 9.711111 0.000000 +5: Optimizing... - 2426 2.93333 -4 1.8 9.711111 0.000000 +5: Optimizing... \ 2729 2.93333 -4 1.8 9.711111 0.000000 +5: Optimizing... - 3032 3.52099 -4.31111 2.11852 8.305722 0.000000 +5: Optimizing... / 3335 3.52099 -4.31111 2.11852 8.305722 0.000000 +5: Optimizing... - 3638 3.52099 -4.31111 2.11852 8.305722 0.000000 +5: Optimizing... \ 3941 4.25171 -4.43457 1.99465 7.497780 0.000000 +5: Optimizing... - 4243 3.60508 -3.65432 2.02016 5.642670 0.000000 +5: Optimizing... - 4446 3.60508 -3.65432 2.02016 5.642670 0.000000 +5: Optimizing... \ 4749 5.39095 -4.01481 2.24691 4.779457 0.000000 +5: Optimizing... - 5052 5.06872 -3.34815 2.74691 1.886279 0.000000 +5: Optimizing... / 5354 4.91248 -1.92099 2.07572 0.868195 0.000000 +5: Optimizing... \ 5556 4.91248 -1.92099 2.07572 0.868195 0.000000 +5: Optimizing... / 5758 4.91248 -1.92099 2.07572 0.868195 0.000000 +5: Optimizing... \ 5961 4.91248 -1.92099 2.07572 0.868195 0.000000 +5: Optimizing... - 6264 4.93604 -2.48718 2.57406 0.422859 0.000000 +5: Optimizing... / 6567 4.93604 -2.48718 2.57406 0.422859 0.000000 +5: Optimizing... - 6870 5.23618 -1.63158 2.55964 0.385428 0.000000 +5: Optimizing... \ 7172 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... / 7375 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... - 7678 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... \ 7981 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... - 8283 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... - 8486 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... \ 8788 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... / 8991 4.86427 -2.03655 2.9586 0.021473 0.000000 +5: Optimizing... - 9294 5.07694 -1.94377 3.00846 0.009154 0.000000 +5: Optimizing... \ 9597 5.07045 -2.02994 2.97016 0.006750 0.000000 +5: Optimizing... - 98100 5.07045 -2.02994 2.97016 0.006750 0.000000 +5: Optimizing... / 101103 4.952 -2.01795 2.9893 0.002741 0.000000 +5: Optimizing... - 104106 5.03751 -1.98392 3.01103 0.001787 0.000000 +5: Optimizing... \ 107109 4.99588 -2.01745 3.03576 0.001600 0.000000 +5: Optimizing... - 110112 5.03279 -2.01819 2.99109 0.001485 0.000000 +5: Optimizing... / 113115 4.98703 -2.01223 3.00096 0.000319 0.000000 +5: Optimizing... - 116118 4.98703 -2.01223 3.00096 0.000319 0.000000 +5: Optimizing... \ 119121 4.98703 -2.01223 3.00096 0.000319 0.000000 +5: Optimizing... - 122124 4.98703 -2.01223 3.00096 0.000319 0.000000 +5: Optimizing... / 125126 5.00769 -2.00495 3.01147 0.000215 0.000000 +5: Optimizing... \ 127129 5.00769 -2.00495 3.01147 0.000215 0.000000 +5: Optimizing... - 130132 4.99637 -2.00775 2.99101 0.000154 0.000000 +5: Optimizing... / 133135 5.00578 -1.99641 3.00255 0.000053 0.000000 +5: Optimizing... - 136138 4.99421 -2.00165 3.00224 0.000041 0.000000 +5: Optimizing... \ 139141 4.99421 -2.00165 3.00224 0.000041 0.000000 +5: Optimizing... - 142144 4.99872 -2.00412 2.99714 0.000027 0.000000 +5: Optimizing... / 145147 5.00225 -1.99974 3.00201 0.000009 0.000000 +5: Optimizing... - 148150 5.00225 -1.99974 3.00201 0.000009 0.000000 +5: Optimizing... \ 151153 5.00225 -1.99974 3.00201 0.000009 0.000000 +5: Optimizing... - 154156 4.99944 -2.00277 2.9996 0.000008 0.000000 +5: Optimizing... / 157158 4.99858 -2.00031 2.99929 0.000003 0.000000 +5: Optimizing... \ 159161 4.99858 -2.00031 2.99929 0.000003 0.000000 +5: Optimizing... - 162164 5.00126 -2.00038 3.00068 0.000002 0.000000 +5: Optimizing... / 165167 5.00127 -2.00056 2.99951 0.000002 0.000000 +5: Optimizing... - 168170 5.00083 -1.99924 2.99994 0.000001 0.000000 +5: Optimizing... \ 171172 4.99985 -2.00018 2.99967 0.000000 0.000000 +5: Optimizing... / 173175 4.99985 -2.00018 2.99967 0.000000 0.000000 +5: Optimizing... - 176178 4.99985 -2.00018 2.99967 0.000000 0.000000 +5: Optimizing... \ 179181 4.99985 -2.00018 2.99967 0.000000 0.000000 +5: Optimizing... - 182183 4.99985 -2.00018 2.99967 0.000000 0.000000 +5: Optimizing... - 184186 4.99985 -2.00018 2.99967 0.000000 0.000000 +5: Optimizing... \ 187188 5.00032 -2.00015 3.00002 0.000000 0.000000 +5: Optimizing... / 189191 5.00032 -2.00015 3.00002 0.000000 0.000000 +5: Optimizing... - 192194 5.00017 -1.99985 2.99974 0.000000 0.000000 +5: Optimizing... \ 195197 4.99996 -2.00008 2.99983 0.000000 0.000000 +5: Optimizing... - 198200 4.99994 -1.99998 3.00005 0.000000 0.000000 +5: Optimizing... / 201203 4.99994 -1.99998 3.00005 0.000000 0.000000 +5: Optimizing... - 204206 4.99994 -1.99998 3.00005 0.000000 0.000000 +5: Optimizing... \ 207209 4.99994 -1.99998 3.00005 0.000000 0.000000 +5: Optimizing... - 210212 4.99994 -1.99998 3.00005 0.000000 0.000000 +5: Optimizing... / 213214 5.00001 -1.99999 2.99994 0.000000 0.000000 +5: Optimizing... \ 215217 5.00001 -1.99999 2.99994 0.000000 0.000000 +5: Optimizing... - 218220 5.00003 -2.00002 2.99999 0.000000 0.000000 +5: Optimizing... / 221223 4.99998 -1.99998 3.00002 0.000000 0.000000 +5: Optimizing... - 224226 4.99998 -1.99998 3.00002 0.000000 0.000000 +5: Optimizing... \ 227228 5.00001 -1.99999 2.99998 0.000000 0.000000 +5: Optimizing... / 229231 5.00001 -1.99999 2.99998 0.000000 0.000000 +5: Optimizing... - 232234 5.00001 -2.00001 2.99999 0.000000 0.000000 +5: Optimizing... \ 235237 4.99999 -1.99999 3 0.000000 0.000000 +5: Optimizing... - 238239 4.99999 -1.99999 3 0.000000 0.000000 +5: Optimizing... - 240241 4.99999 -1.99999 3 0.000000 0.000000 +5: Optimizing... - 242244 4.99999 -1.99999 3 0.000000 0.000000 +5: Optimizing... / 245247 5 -2 3 0.000000 0.000000 +5: Optimizing... - 248250 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 251253 5 -2 3 0.000000 0.000000 +5: Optimizing... - 254255 5 -2 3 0.000000 0.000000 +5: Optimizing... - 256258 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 259261 5 -2 3 0.000000 0.000000 +5: Optimizing... - 262264 5 -2 3 0.000000 0.000000 +5: Optimizing... / 265267 5 -2 3 0.000000 0.000000 +5: Optimizing... - 268270 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 271273 5 -2 3 0.000000 0.000000 +5: Optimizing... - 274276 5 -2 3 0.000000 0.000000 +5: Optimizing... / 277279 5 -2 3 0.000000 0.000000 +5: Optimizing... - 280281 5 -2 3 0.000000 0.000000 +5: Optimizing... - 282283 5 -2 3 0.000000 0.000000 +5: Optimizing... - 284286 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 287289 5 -2 3 0.000000 0.000000 +5: Optimizing... - 290292 5 -2 3 0.000000 0.000000 +5: Optimizing... / 293294 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 295297 5 -2 3 0.000000 0.000000 +5: Optimizing... - 298300 5 -2 3 0.000000 0.000000 +5: Optimizing... / 301303 5 -2 3 0.000000 0.000000 +5: Optimizing... - 304306 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 307309 5 -2 3 0.000000 0.000000 +5: Optimizing... - 310312 5 -2 3 0.000000 0.000000 +5: Optimizing... / 313315 5 -2 3 0.000000 0.000000 +5: Optimizing... - 316318 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 319321 5 -2 3 0.000000 0.000000 +5: Optimizing... - 322323 5 -2 3 0.000000 0.000000 +5: Optimizing... - 324326 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 327329 5 -2 3 0.000000 0.000000 +5: Optimizing... - 330332 5 -2 3 0.000000 0.000000 +5: Optimizing... / 333334 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 335337 5 -2 3 0.000000 0.000000 +5: Optimizing... - 338340 5 -2 3 0.000000 0.000000 +5: Optimizing... / 341343 5 -2 3 0.000000 0.000000 +5: Optimizing... - 344346 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 347349 5 -2 3 0.000000 0.000000 +5: Optimizing... - 350352 5 -2 3 0.000000 0.000000 +5: Optimizing... / 353355 5 -2 3 0.000000 0.000000 +5: Optimizing... - 356357 5 -2 3 0.000000 0.000000 +5: Optimizing... - 358360 5 -2 3 0.000000 0.000000 +5: Optimizing... / 361363 5 -2 3 0.000000 0.000000 +5: Optimizing... - 364366 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 367369 5 -2 3 0.000000 0.000000 +5: Optimizing... - 370372 5 -2 3 0.000000 0.000000 +5: Optimizing... / 373374 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 375377 5 -2 3 0.000000 0.000000 +5: Optimizing... - 378380 5 -2 3 0.000000 0.000000 +5: Optimizing... / 381383 5 -2 3 0.000000 0.000000 +5: Optimizing... - 384386 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 387389 5 -2 3 0.000000 0.000000 +5: Optimizing... - 390392 5 -2 3 0.000000 0.000000 +5: Optimizing... / 393395 5 -2 3 0.000000 0.000000 +5: Optimizing... - 396398 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 399401 5 -2 3 0.000000 0.000000 +5: Optimizing... - 402404 5 -2 3 0.000000 0.000000 +5: Optimizing... / 405407 5 -2 3 0.000000 0.000000 +5: Optimizing... - 408410 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 411413 5 -2 3 0.000000 0.000000 +5: Optimizing... - 414416 5 -2 3 0.000000 0.000000 +5: Optimizing... / 417419 5 -2 3 0.000000 0.000000 +5: Optimizing... - 420422 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 423424 5 -2 3 0.000000 0.000000 +5: Optimizing... / 425427 5 -2 3 0.000000 0.000000 +5: Optimizing... - 428430 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 431432 5 -2 3 0.000000 0.000000 +5: Optimizing... / 433435 5 -2 3 0.000000 0.000000 +5: Optimizing... - 436438 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 439441 5 -2 3 0.000000 0.000000 +5: Optimizing... - 442444 5 -2 3 0.000000 0.000000 +5: Optimizing... / 445447 5 -2 3 0.000000 0.000000 +5: Optimizing... - 448450 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 451453 5 -2 3 0.000000 0.000000 +5: Optimizing... - 454456 5 -2 3 0.000000 0.000000 +5: Optimizing... / 457458 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 459460 5 -2 3 0.000000 0.000000 +5: Optimizing... / 461462 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 463465 5 -2 3 0.000000 0.000000 +5: Optimizing... - 466468 5 -2 3 0.000000 0.000000 +5: Optimizing... / 469471 5 -2 3 0.000000 0.000000 +5: Optimizing... - 472474 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 475477 5 -2 3 0.000000 0.000000 +5: Optimizing... - 478480 5 -2 3 0.000000 0.000000 +5: Optimizing... / 481483 5 -2 3 0.000000 0.000000 +5: Optimizing... - 484486 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 487489 5 -2 3 0.000000 0.000000 +5: Optimizing... - 490492 5 -2 3 0.000000 0.000000 +5: Optimizing... / 493494 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 495497 5 -2 3 0.000000 0.000000 +5: Optimizing... - 498500 5 -2 3 0.000000 0.000000 +5: Optimizing... / 501503 5 -2 3 0.000000 0.000000 +5: Optimizing... - 504506 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 507509 5 -2 3 0.000000 0.000000 +5: Optimizing... - 510512 5 -2 3 0.000000 0.000000 +5: Optimizing... / 513515 5 -2 3 0.000000 0.000000 +5: Optimizing... - 516518 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 519520 5 -2 3 0.000000 0.000000 +5: Optimizing... / 521523 5 -2 3 0.000000 0.000000 +5: Optimizing... - 524526 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 527529 5 -2 3 0.000000 0.000000 +5: Optimizing... - 530532 5 -2 3 0.000000 0.000000 +5: Optimizing... / 533535 5 -2 3 0.000000 0.000000 +5: Optimizing... - 536538 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 539541 5 -2 3 0.000000 0.000000 +5: Optimizing... - 542544 5 -2 3 0.000000 0.000000 +5: Optimizing... / 545547 5 -2 3 0.000000 0.000000 +5: Optimizing... - 548549 5 -2 3 0.000000 0.000000 +5: Optimizing... - 550551 5 -2 3 0.000000 0.000000 +5: Optimizing... - 552554 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 555557 5 -2 3 0.000000 0.000000 +5: Optimizing... - 558560 5 -2 3 0.000000 0.000000 +5: Optimizing... / 561563 5 -2 3 0.000000 0.000000 +5: Optimizing... - 564566 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 567569 5 -2 3 0.000000 0.000000 +5: Optimizing... - 570572 5 -2 3 0.000000 0.000000 +5: Optimizing... / 573581 5 -2 3 0.000000 0.000000 +5: Optimizing... - 582584 5 -2 3 0.000000 0.000000 +5: Optimizing... / 585587 5 -2 3 0.000000 0.000000 +5: Optimizing... - 588589 5 -2 3 0.000000 0.000000 +5: Optimizing... - 590592 5 -2 3 0.000000 0.000000 +5: Optimizing... / 593595 5 -2 3 0.000000 0.000000 +5: Optimizing... - 596598 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 599601 5 -2 3 0.000000 0.000000 +5: Optimizing... - 602604 5 -2 3 0.000000 0.000000 +5: Optimizing... / 605607 5 -2 3 0.000000 0.000000 +5: Optimizing... - 608610 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 611613 5 -2 3 0.000000 0.000000 +5: Optimizing... - 614616 5 -2 3 0.000000 0.000000 +5: Optimizing... / 617619 5 -2 3 0.000000 0.000000 +5: Optimizing... - 620621 5 -2 3 0.000000 0.000000 +5: Optimizing... - 622624 5 -2 3 0.000000 0.000000 +5: Optimizing... / 625626 5 -2 3 0.000000 0.000000 +5: Optimizing... \ 627629 5 -2 3 0.000000 0.000000 +5: x=5.000000 +5: y=-2.000000 +5: z=3.000000 +5: f=0.000000 +5: 0.00000000000000222045 + 3/19 Test #4: test_distributions ............... Passed 0.06 sec test 7 Start 7: test_gradient 7: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_gradient 7: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 7: Test timeout computed to be: 1500 + 4/19 Test #5: test_downhill .................... Passed 0.06 sec 6: M= 6: 2x2 6: [ @@ -3545,13 +3581,19 @@ 6: [2.3, 1.4] 6: [5, -0.9] 6: ] - 5/19 Test #6: test_eigen ....................... Passed 0.03 sec + 5/19 Test #6: test_eigen ....................... Passed 0.05 sec test 8 Start 8: test_graphObs 8: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_graphObs 8: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 8: Test timeout computed to be: 1500 +test 9 + Start 9: test_matrices + +9: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_matrices +9: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test +9: Test timeout computed to be: 1500 7: 38 7: Step x y z Function Time 7: 0 0 0 0 38.000000 0.000000 @@ -3562,13 +3604,6 @@ 7: z=3.000000 7: f=0.000000 7: 0.00000000000171640480 - 6/19 Test #7: test_gradient .................... Passed 0.04 sec -test 9 - Start 9: test_matrices - -9: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_matrices -9: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test -9: Test timeout computed to be: 1500 8: Creating node zero. 8: digraph myTestDirGrObs { 8: 0; @@ -3626,6 +3661,7 @@ 8: 3 8: 4 8: + 6/19 Test #7: test_gradient .................... Passed 0.06 sec 7/19 Test #8: test_graphObs .................... Passed 0.04 sec test 10 Start 10: test_mva @@ -3633,6 +3669,12 @@ 10: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_mva 10: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 10: Test timeout computed to be: 1500 +test 11 + Start 11: test_numconstants + +11: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_numconstants +11: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test +11: Test timeout computed to be: 1500 9: 2x2 9: [ 9: [2.3, 1.4] @@ -3649,13 +3691,6 @@ 9: [10.24, 25.81] 9: ] 9: Test passed............................: yes - 8/19 Test #9: test_matrices .................... Passed 0.04 sec -test 11 - Start 11: test_numconstants - -11: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_numconstants -11: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test -11: Test timeout computed to be: 1500 10: 10: First test for the Pca class, with a square matrix : 10: @@ -3666,15 +3701,6 @@ 10: [20, 10, 40] 10: [30, 40, 10] 10: ] -11: Min double :2.22507e-308 -11: Max double :1.79769e+308 -11: bpp::NumConstants::INF() :inf -11: bpp::NumConstants::MINF() :-inf -11: bpp::NumConstants::PINF() :inf -11: bpp::NumConstants::NaNF() :nan -11: Compiler implements infinity :yes -11: Compiler implements quiet nan :yes -11: Compiler implements signaling nan :yes 10: WARNING!!! The number of axes to kept has been reduced to conserve only significant axes 10: The matrix of Row Coordinates : 10: 3x2 @@ -3726,20 +3752,36 @@ 10: ] 10: 10: - 9/19 Test #11: test_numconstants ................ Passed 0.03 sec +11: Min double :2.22507e-308 +11: Max double :1.79769e+308 +11: bpp::NumConstants::INF() :inf +11: bpp::NumConstants::MINF() :-inf +11: bpp::NumConstants::PINF() :inf +11: bpp::NumConstants::NaNF() :nan +11: Compiler implements infinity :yes +11: Compiler implements quiet nan :yes +11: Compiler implements signaling nan :yes + 8/19 Test #9: test_matrices .................... Passed 0.06 sec + 9/19 Test #10: test_mva ......................... Passed 0.04 sec +10/19 Test #11: test_numconstants ................ Passed 0.02 sec test 12 Start 12: test_powell 12: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_powell 12: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 12: Test timeout computed to be: 1500 -10/19 Test #10: test_mva ......................... Passed 0.06 sec test 13 Start 13: test_range 13: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_range 13: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 13: Test timeout computed to be: 1500 +test 14 + Start 14: test_reparametrization + +14: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_reparametrization +14: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test +14: Test timeout computed to be: 1500 12: 38 12: Step x y z Function Time 12: 0 0 0 0 38.000000 0.000000 @@ -3750,13 +3792,6 @@ 12: z=3.000000 12: f=0.000000 12: 0.00000000000050093263 -11/19 Test #12: test_powell ...................... Passed 0.04 sec -test 14 - Start 14: test_reparametrization - -14: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_reparametrization -14: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test -14: Test timeout computed to be: 1500 13: 13: ..:: Definitions ::.. 13: r1: [3,6[ @@ -3848,13 +3883,20 @@ 13: { [9,11[ [10,13[ [18,21[ [19,24[ } 13: Adding [0,50[ 13: { [0,50[ [9,11[ [10,13[ [18,21[ [19,24[ } -12/19 Test #13: test_range ....................... Passed 0.07 sec +11/19 Test #12: test_powell ...................... Passed 0.03 sec +12/19 Test #13: test_range ....................... Passed 0.03 sec test 15 Start 15: test_sample 15: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_sample 15: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 15: Test timeout computed to be: 1500 +test 16 + Start 16: test_simplex + +16: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_simplex +16: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test +16: Test timeout computed to be: 1500 14: Parameter x was tanh transformed: 0->-0.972955 14: Parameter y was tanh transformed: 0->0 14: Step x y Function Time @@ -3866,19 +3908,19 @@ 14: y=-1.570796 14: f=-2.000000 14: 0.00000066478104843171 -13/19 Test #14: test_reparametrization ........... Passed 0.05 sec -test 16 - Start 16: test_simplex - -16: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_simplex -16: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test -16: Test timeout computed to be: 1500 +13/19 Test #14: test_reparametrization ........... Passed 0.06 sec 15: -*- Check without replacement -*- -15: A 1950 0.195 0.2 -15: B 1954 0.1954 0.2 -15: C 2036 0.2036 0.2 -15: D 2038 0.2038 0.2 -15: E 2022 0.2022 0.2 +15: A 1978 0.1978 0.2 +15: B 1973 0.1973 0.2 +15: C 2061 0.2061 0.2 +15: D 2047 0.2047 0.2 +15: E 1941 0.1941 0.2 +15: --------------------------------------- +15: A 4026 0.4026 0.4 +15: B 3996 0.3996 0.4 +15: C 4038 0.4038 0.4 +15: D 3962 0.3962 0.4 +15: E 3978 0.3978 0.4 15: --------------------------------------- 16: Method 1 16: 0.1 0.222222 0.428571 0.375 0.4 0.333333 @@ -3893,91 +3935,72 @@ 16: prob 0.1 0.2 0.3 0.15 0.1 0.05 0.1 16: Method 3 16: prob 0.1 0.2 0.3 0.15 0.1 0.05 0.1 -14/19 Test #16: test_simplex ..................... Passed 0.03 sec +14/19 Test #16: test_simplex ..................... Passed 0.02 sec test 17 Start 17: test_stats 17: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_stats 17: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 17: Test timeout computed to be: 1500 -15: A 4059 0.4059 0.4 -15: B 3988 0.3988 0.4 -15: C 3947 0.3947 0.4 -15: D 4011 0.4011 0.4 -15: E 3995 0.3995 0.4 -15: --------------------------------------- -17: 54 83 -17: 15 46 44 32 -17: 2x4 -17: [ -17: [9, 25, 11, 9] -17: [6, 21, 33, 23] -17: ] -17: 10.7369 0.0132372 -15: A 6022 0.6022 0.6 -15: B 6081 0.6081 0.6 -15: C 5965 0.5965 0.6 -15: D 5978 0.5978 0.6 -15: E 5954 0.5954 0.6 -15: --------------------------------------- -15: A 8004 0.8004 0.8 -15: B 8003 0.8003 0.8 -15: C 8040 0.804 0.8 -15: D 7979 0.7979 0.8 -15: E 7974 0.7974 0.8 -15: --------------------------------------- -15: -*- Check with replacement -*- -15: A 1962 0.1962 0.2 -15: B 1963 0.1963 0.2 -15: C 2038 0.2038 0.2 -15: D 2040 0.204 0.2 -15: E 1997 0.1997 0.2 -15: --------------------------------------- -15: A 4039 0.4039 0.4 -15: B 4004 0.4004 0.4 -15: C 4023 0.4023 0.4 -15: D 4001 0.4001 0.4 -15: E 3933 0.3933 0.4 -15: --------------------------------------- -17: 10.7369 0.0119494 -15/19 Test #17: test_stats ....................... Passed 0.08 sec test 18 Start 18: test_text_tools 18: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_text_tools 18: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 18: Test timeout computed to be: 1500 -15: A 6085 0.6085 0.6 -15: B 6014 0.6014 0.6 -15: C 5951 0.5951 0.6 -15: D 6016 0.6016 0.6 -15: E 5934 0.5934 0.6 +15: A 6045 0.6045 0.6 +15: B 5945 0.5945 0.6 +15: C 6044 0.6044 0.6 +15: D 5942 0.5942 0.6 +15: E 6024 0.6024 0.6 +15: --------------------------------------- +15: A 8039 0.8039 0.8 +15: B 7983 0.7983 0.8 +15: C 7975 0.7975 0.8 +15: D 7998 0.7998 0.8 +15: E 8005 0.8005 0.8 +15: --------------------------------------- +15: -*- Check with replacement -*- +15: A 1980 0.198 0.2 +15: B 2012 0.2012 0.2 +15: C 1995 0.1995 0.2 +15: D 1999 0.1999 0.2 +15: E 2014 0.2014 0.2 15: --------------------------------------- +15: A 4037 0.4037 0.4 +15: B 3982 0.3982 0.4 +15: C 3971 0.3971 0.4 +15: D 4099 0.4099 0.4 +15: E 3911 0.3911 0.4 +15: --------------------------------------- +17: 54 83 +17: 15 46 44 32 +17: 2x4 +17: [ +17: [7, 16, 20, 11] +17: [8, 30, 24, 21] +17: ] +17: 10.7369 0.0132372 18: [doctest] doctest version is "1.1.4" 18: [doctest] run with "--help" for options 18: =============================================================================== 18: [doctest] test cases: 8 | 8 passed | 0 failed | 0 skipped 18: [doctest] assertions: 80 | 80 passed | 0 failed | -16/19 Test #18: test_text_tools .................. Passed 0.03 sec +15/19 Test #18: test_text_tools .................. Passed 0.02 sec test 19 Start 19: test_treeGraphObs 19: Test command: /build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf/test/test_treeGraphObs 19: Working Directory: /build/reproducible-path/libbpp-core-2.4.1/test 19: Test timeout computed to be: 1500 -15: A 7948 0.7948 0.8 -15: B 7888 0.7888 0.8 -15: C 7995 0.7995 0.8 -15: D 8183 0.8183 0.8 -15: E 7986 0.7986 0.8 -15: --------------------------------------- -15: -*- Check with replacement and weights -*- -15: A 1232 0.1232 0.125 -15: B 1908 0.1908 0.1875 -15: C 4965 0.4965 0.5 -15: D 1249 0.1249 0.125 -15: E 646 0.0646 0.0625 +15: A 5940 0.594 0.6 +15: B 5979 0.5979 0.6 +15: C 5934 0.5934 0.6 +15: D 6148 0.6148 0.6 +15: E 5999 0.5999 0.6 15: --------------------------------------- +17: 10.7369 0.0119494 +16/19 Test #17: test_stats ....................... Passed 0.06 sec 19: Creating node zero. 19: digraph myTestDirGrObs { 19: 0; @@ -4066,36 +4089,49 @@ 19: Is this a tree? 19: FALSE 19: Test passed -17/19 Test #19: test_treeGraphObs ................ Passed 0.03 sec -15: A 2523 0.12615 0.125 -15: B 3771 0.18855 0.1875 -15: C 9869 0.49345 0.5 -15: D 2585 0.12925 0.125 -15: E 1252 0.0626 0.0625 +17/19 Test #19: test_treeGraphObs ................ Passed 0.02 sec +15: A 8090 0.809 0.8 +15: B 7943 0.7943 0.8 +15: C 8069 0.8069 0.8 +15: D 8040 0.804 0.8 +15: E 7858 0.7858 0.8 15: --------------------------------------- -15: A 3678 0.1226 0.125 -15: B 5659 0.188633 0.1875 -15: C 15141 0.5047 0.5 -15: D 3726 0.1242 0.125 -15: E 1796 0.0598667 0.0625 +15: -*- Check with replacement and weights -*- +15: A 1268 0.1268 0.125 +15: B 1921 0.1921 0.1875 +15: C 4939 0.4939 0.5 +15: D 1238 0.1238 0.125 +15: E 634 0.0634 0.0625 15: --------------------------------------- -15: A 5000 0.125 0.125 -15: B 7467 0.186675 0.1875 -15: C 20011 0.500275 0.5 -15: D 4948 0.1237 0.125 -15: E 2574 0.06435 0.0625 +15: A 2547 0.12735 0.125 +15: B 3688 0.1844 0.1875 +15: C 10064 0.5032 0.5 +15: D 2484 0.1242 0.125 +15: E 1217 0.06085 0.0625 15: --------------------------------------- -18/19 Test #15: test_sample ...................... Passed 0.27 sec -19/19 Test #3: test_derivative1 ................. Passed 2.08 sec +15: A 3645 0.1215 0.125 +15: B 5624 0.187467 0.1875 +15: C 15048 0.5016 0.5 +15: D 3711 0.1237 0.125 +15: E 1972 0.0657333 0.0625 +15: --------------------------------------- +15: A 5062 0.12655 0.125 +15: B 7428 0.1857 0.1875 +15: C 20000 0.5 0.5 +15: D 5025 0.125625 0.125 +15: E 2485 0.062125 0.0625 +15: --------------------------------------- +18/19 Test #15: test_sample ...................... Passed 0.16 sec +19/19 Test #3: test_derivative1 ................. Passed 0.62 sec 100% tests passed, 0 tests failed out of 19 -Total Test time (real) = 2.13 sec +Total Test time (real) = 0.64 sec make[1]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/libbpp-core-2.4.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/build/reproducible-path/libbpp-core-2.4.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/libbpp-core-2.4.1 -B/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4112,176 +4148,176 @@ -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-core.so.4 -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-core.so -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/GlobalGraph.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationGraphImplObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/TreeGraph.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationTreeGraphObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationDAGraphObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/TreeGraphImpl.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationGraphObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/Graph.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationDAGraphImplObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/DAGraphImpl.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationTreeGraphImplObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/GraphObserver.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/DAGraph.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Point2D.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/ColorTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Svg --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Svg/SvgGraphicDevice.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/GraphicDevice.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig/XFigPostscriptFontManager.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig/XFigLaTeXFontManager.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig/XFigGraphicDevice.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/AbstractGraphicDevice.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/ColorSet.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Latex --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Latex/PgfGraphicDevice.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Latex/DvipsColorSet.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/DefaultColorSet.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/RgbColor.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/R --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/R/RColorSet.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Font --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Font/FontManager.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Font/Font.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/ColorManager.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Point2DTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Molscript --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Molscript/MolscriptColorSet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Clonable.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/BppVector.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Text +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Text/TextTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Text/NestedStringTokenizer.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Text/StringTokenizer.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Text/KeyvalTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/BppBoolean.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/FileTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/IoDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/BppOParametrizableFormat.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/BppODiscreteDistributionFormat.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/OutputStream.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/IoFormat.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/IoDiscreteDistributionFactory.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/IoParametrizable.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Version.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/App --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/App/NumCalcApplicationTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/App/ApplicationTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/App/NumCalcApplicationTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/App/BppApplication.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Parametrizable.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParametrizableCollection.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/VectorTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParameterList.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/VectorExceptions.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/TransformedParameter.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AbstractParameterAliasable.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/OptimizationStopCondition.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/ThreePointsNumericalDerivative.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/FunctionOperator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/NegativeOperator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/MathOperator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/ConstantOperator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/ComputationTree.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/Operator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/BinaryOperator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/AbstractNumericalDerivative.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/MetaOptimizer.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/PowellMultiDimensions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/BfgsMultiDimensions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/NewtonOneDimension.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/BrentOneDimension.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/DirectionFunction.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/FivePointsNumericalDerivative.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Functions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/FunctionTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/GoldenSectionSearch.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/ReparametrizationFunctionWrapper.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/SimpleMultiDimensions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/DownhillSimplexMethod.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/AbstractOptimizer.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/NewtonBacktrackOneDimension.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/TwoPointsNumericalDerivative.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/OneDimensionOptimizationTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Optimizer.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/NumTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AbstractParametrizable.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/IntegerTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/EigenValue.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/Matrix.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/MatrixTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/LUDecomposition.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Range.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AbstractParameterAliasable.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/ContingencyTableGenerator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/Uniform01WH.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/RandomFactory.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/Uniform01K.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/Uniform01QD.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/RandomTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Table.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Constraints.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/VectorTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/ContingencyTableTest.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/StatTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/StatTest.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/Mva -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/Mva/DualityDiagram.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/StatTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/StatTest.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParameterExceptions.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Stat/ContingencyTableTest.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/NumTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/NumConstants.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/Matrix.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/LUDecomposition.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/MatrixTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Matrix/EigenValue.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/IntegerTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Number.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Parameter.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Range.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/SimpleDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/UniformDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/MixtureOfDiscreteDistributions.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/ExponentialDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/GammaDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/GaussianDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/TruncatedExponentialDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/BetaDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/DirichletDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/Simplex.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/MultipleDiscreteDistribution.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/ConstantDistribution.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/DataTable.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AdaptiveKernelDensityEstimation.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParameterAliasable.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AutoParameter.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParameterExceptions.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/HmmExceptions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/HmmLikelihood.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/HmmStateAlphabet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/HmmTransitionMatrix.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/HmmEmissionProbabilities.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParameterList.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AutoParameter.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Table.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/Uniform01WH.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/Uniform01QD.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/ContingencyTableGenerator.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/RandomFactory.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/RandomTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Random/Uniform01K.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Constraints.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/AdaptiveKernelDensityEstimation.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/TableExceptions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/ParameterAliasable.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/NumConstants.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/BetaDiscreteDistribution.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/MultipleDiscreteDistribution.h --- Installing: 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/build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/InvariantMixedDiscreteDistribution.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/UniformDiscreteDistribution.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/SimpleDiscreteDistribution.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Prob/Simplex.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Parameter.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/VectorExceptions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Version.h --- Installing: 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Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/MetaOptimizer.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/GoldenSectionSearch.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/ThreePointsNumericalDerivative.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/BfgsMultiDimensions.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/SimpleNewtonMultiDimensions.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/MathOperator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/Operator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/ConstantOperator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/BinaryOperator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/ComputationTree.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/NegativeOperator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/Operators/FunctionOperator.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/ReparametrizationFunctionWrapper.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/TwoPointsNumericalDerivative.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/NewtonOneDimension.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/ConjugateGradientMultiDimensions.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Numeric/Function/SimpleMultiDimensions.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Exceptions.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/IoFormat.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/BppODiscreteDistributionFormat.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/IoParametrizable.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Io/FileTools.h --- 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/build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Text/TextTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Utils --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Utils/MapTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Utils/AttributesTools.h --- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/BppBoolean.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Utils/MapTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Point2D.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/ColorTools.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/DefaultColorSet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/R +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/R/RColorSet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/ColorManager.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/GraphicDevice.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/AbstractGraphicDevice.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/RgbColor.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Font +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Font/Font.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Font/FontManager.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/ColorSet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Svg +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Svg/SvgGraphicDevice.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig/XFigLaTeXFontManager.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig/XFigPostscriptFontManager.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Fig/XFigGraphicDevice.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Latex +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Latex/PgfGraphicDevice.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Latex/DvipsColorSet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Molscript +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Molscript/MolscriptColorSet.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graphics/Point2DTools.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/BppString.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/Graph.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/TreeGraphImpl.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationDAGraphObserver.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/GraphObserver.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationGraphObserver.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/TreeGraph.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationGraphImplObserver.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationTreeGraphObserver.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationDAGraphImplObserver.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/GlobalGraph.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/DAGraphImpl.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/DAGraph.h +-- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/include/Bpp/Graph/AssociationTreeGraphImplObserver.h -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-core/bpp-core-targets.cmake -- Installing: /build/reproducible-path/libbpp-core-2.4.1/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-core/bpp-core-targets-none.cmake make[1]: Leaving directory '/build/reproducible-path/libbpp-core-2.4.1/obj-arm-linux-gnueabihf' @@ -4343,12 +4379,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/13933/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/17650 and its subdirectories -I: Current time: Wed Jul 10 01:54:26 -12 2024 -I: pbuilder-time-stamp: 1720619666 +I: removing directory /srv/workspace/pbuilder/13933 and its subdirectories +I: Current time: Thu Jul 11 04:01:59 +14 2024 +I: pbuilder-time-stamp: 1720620119