Diff of the two buildlogs: -- --- b1/build.log 2024-04-08 13:39:59.472850326 +0000 +++ b2/build.log 2024-04-08 14:14:11.489580073 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Apr 8 01:25:22 -12 2024 -I: pbuilder-time-stamp: 1712582722 +I: Current time: Tue Apr 9 03:40:15 +14 2024 +I: pbuilder-time-stamp: 1712583615 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: applying force-link-rt-pthread.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/32242/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/D01_modify_environment starting +debug: Running on ff4a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 8 13:40 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='0de32657d9384846bfe6c19e2bf7c9d5' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='32242' - PS1='# ' - PS2='> ' + INVOCATION_ID=d38cf20bf1d44e86afd6aacf6f810539 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15347 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G9hyI8wJ/pbuilderrc_YgjT --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G9hyI8wJ/b1 --logfile b1/build.log lambda-align_1.0.3-6.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G9hyI8wJ/pbuilderrc_KyXo --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G9hyI8wJ/b2 --logfile b2/build.log lambda-align_1.0.3-6.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt64c 6.1.0-18-arm64 #1 SMP Debian 6.1.76-1 (2024-02-01) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-18-armmp-lpae #1 SMP Debian 6.1.76-1 (2024-02-01) armv7l GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 5 07:43 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/32242/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 6 07:44 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -174,7 +206,7 @@ Get: 53 http://deb.debian.org/debian unstable/main armhf libseqan2-dev all 2.4.0+dfsg-16 [1216 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf openssl armhf 3.2.1-3 [1326 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1 [904 kB] -Fetched 32.3 MB in 1s (34.5 MB/s) +Fetched 32.3 MB in 3s (10.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19466 files and directories currently installed.) @@ -414,7 +446,11 @@ fakeroot is already the newest version (1.33-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/lambda-align-1.0.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lambda-align_1.0.3-6_source.changes +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/lambda-align-1.0.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lambda-align_1.0.3-6_source.changes dpkg-buildpackage: info: source package lambda-align dpkg-buildpackage: info: source version 1.0.3-6 dpkg-buildpackage: info: source distribution unstable @@ -492,8 +528,8 @@ CMake that the project does not need compatibility with older versions. --- Configuring done (3.2s) --- Generating done (0.1s) +-- Configuring done (7.0s) +-- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: @@ -509,27 +545,27 @@ -- Build files have been written to: /build/reproducible-path/lambda-align-1.0.3/build make[1]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3' dh_auto_build -O--builddirectory=build - cd build && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 + cd build && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' /usr/bin/cmake -S/build/reproducible-path/lambda-align-1.0.3 -B/build/reproducible-path/lambda-align-1.0.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/lambda-align-1.0.3/build/CMakeFiles /build/reproducible-path/lambda-align-1.0.3/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend -make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend +make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' cd /build/reproducible-path/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/lambda-align-1.0.3 /build/reproducible-path/lambda-align-1.0.3/src /build/reproducible-path/lambda-align-1.0.3/build /build/reproducible-path/lambda-align-1.0.3/build/src /build/reproducible-path/lambda-align-1.0.3/build/src/CMakeFiles/lambda.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' cd /build/reproducible-path/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/lambda-align-1.0.3 /build/reproducible-path/lambda-align-1.0.3/src /build/reproducible-path/lambda-align-1.0.3/build /build/reproducible-path/lambda-align-1.0.3/build/src /build/reproducible-path/lambda-align-1.0.3/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build +make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' -make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' -[ 50%] Building CXX object src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -[ 50%] Building CXX object src/CMakeFiles/lambda.dir/lambda.cpp.o +[ 25%] Building CXX object src/CMakeFiles/lambda.dir/lambda.cpp.o cd /build/reproducible-path/lambda-align-1.0.3/build/src && /usr/bin/c++ -DCMAKE_BUILD_TYPE=\"Release\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -ffile-prefix-map=/build/reproducible-path/lambda-align-1.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=4 -O3 -DNDEBUG -s -MD -MT src/CMakeFiles/lambda.dir/lambda.cpp.o -MF CMakeFiles/lambda.dir/lambda.cpp.o.d -o CMakeFiles/lambda.dir/lambda.cpp.o -c /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp +[ 50%] Building CXX object src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o cd /build/reproducible-path/lambda-align-1.0.3/build/src && /usr/bin/c++ -DCMAKE_BUILD_TYPE=\"Release\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -ffile-prefix-map=/build/reproducible-path/lambda-align-1.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=4 -O3 -DNDEBUG -s -MD -MT src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -MF CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o.d -o CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -c /build/reproducible-path/lambda-align-1.0.3/src/lambda_indexer.cpp In file included from /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp:32: /build/reproducible-path/lambda-align-1.0.3/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -541,6 +577,20 @@ /build/reproducible-path/lambda-align-1.0.3/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 323 | setDate(parser, __DATE__); | ^~~~~~~~ +In file included from /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp:34: +/build/reproducible-path/lambda-align-1.0.3/src/lambda.hpp:79:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] + 79 | public ::std::binary_function < TSav, TSav, bool > + | ^~~~~~~~~~~~~~~ +In file included from /usr/include/c++/13/string:49, + from /usr/include/c++/13/bits/locale_classes.h:40, + from /usr/include/c++/13/bits/ios_base.h:41, + from /usr/include/c++/13/ios:44, + from /usr/include/c++/13/ostream:40, + from /usr/include/c++/13/iostream:41, + from /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp:22: +/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here + 131 | struct binary_function + | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/lambda-align-1.0.3/src/lambda_indexer.hpp:37: /build/reproducible-path/lambda-align-1.0.3/src/radix_inplace.h:121:17: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 121 | public std::unary_function @@ -564,20 +614,6 @@ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ -In file included from /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp:34: -/build/reproducible-path/lambda-align-1.0.3/src/lambda.hpp:79:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] - 79 | public ::std::binary_function < TSav, TSav, bool > - | ^~~~~~~~~~~~~~~ -In file included from /usr/include/c++/13/string:49, - from /usr/include/c++/13/bits/locale_classes.h:40, - from /usr/include/c++/13/bits/ios_base.h:41, - from /usr/include/c++/13/ios:44, - from /usr/include/c++/13/ostream:40, - from /usr/include/c++/13/iostream:41, - from /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp:22: -/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here - 131 | struct binary_function - | ^~~~~~~~~~~~~~~ /build/reproducible-path/lambda-align-1.0.3/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /build/reproducible-path/lambda-align-1.0.3/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, seqan::BlastProgram::BLASTN, seqan::BlastTabularSpec::NO_COMMENTS>, seqan::Tag >]' /build/reproducible-path/lambda-align-1.0.3/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = seqan::BlastProgram::BLASTN; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::NO_COMMENTS]' @@ -1339,7 +1375,10 @@ /build/reproducible-path/lambda-align-1.0.3/src/options.hpp:173:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | getcwd(cwd, 1000); | ~~~~~~^~~~~~~~~~~ -[ 75%] Linking CXX executable ../bin/lambda_indexer +[ 75%] Linking CXX executable ../bin/lambda +cd /build/reproducible-path/lambda-align-1.0.3/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/lambda-align-1.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=4 -O3 -DNDEBUG -s -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda.dir/lambda.cpp.o -o ../bin/lambda -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread +[100%] Linking CXX executable ../bin/lambda_indexer cd /build/reproducible-path/lambda-align-1.0.3/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda_indexer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/lambda-align-1.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=4 -O3 -DNDEBUG -s -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -o ../bin/lambda_indexer -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread In function 'allocate', @@ -1355,73 +1394,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, - inlined from 'assign.constprop.isra' at /usr/include/seqan/pipe/pool_base.h:1369:42: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In function 'assign.constprop.isra': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In function 'append': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:260:21: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In member function 'insertStream': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:270:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:280:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1442,7 +1415,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:280:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:290:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1463,7 +1436,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:290:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:415:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1527,41 +1500,11 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, - inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, - inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, - inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, - inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In member function 'process.isra': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, - inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, - inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, - inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, - inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: + inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'process.isra': +/usr/include/c++/13/new: In function 'append': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1579,34 +1522,12 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, - inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, - inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, - inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: + inlined from 'assign.constprop.isra' at /usr/include/seqan/pipe/pool_base.h:1369:42: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'process.isra': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:18, - inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:11, - inlined from '_toText' at /usr/include/seqan/arg_parse/arg_parse_ctd_support.h:88:30: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967248' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In function '_toText': +/usr/include/c++/13/new: In function 'assign.constprop.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1660,16 +1581,14 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, + inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, + inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, + inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new: In function '_popIterators.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1681,24 +1600,17 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, + inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, + inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, + inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new: In function '_popIterators.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ -make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' -[ 75%] Built target lambda_indexer -[100%] Linking CXX executable ../bin/lambda -cd /build/reproducible-path/lambda-align-1.0.3/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/lambda-align-1.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-vla -flto=4 -O3 -DNDEBUG -s -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda.dir/lambda.cpp.o -o ../bin/lambda -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, @@ -1712,7 +1624,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:280:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:260:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1733,7 +1645,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:290:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:270:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1754,7 +1666,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:415:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:280:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1775,7 +1687,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:290:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1796,7 +1708,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1817,7 +1729,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -1833,16 +1745,25 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, + inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, + inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, + inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1857,11 +1778,22 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, + inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_popIterators.isra': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1895,22 +1827,11 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, - inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_popIterators.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1925,7 +1846,7 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, @@ -1936,11 +1857,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE3ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE3ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -1955,7 +1876,7 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, @@ -1985,22 +1906,11 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, - inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE3ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEENS_7IndexSaIvEENST_INS_16HammingDistance_EEENST_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINST_INS_9TagExact_EEES13_EE15LocalDataHolderI16GlobalDataHolderIS5_SM_NST_INS_13BlastTabular_EEELNS_12BlastProgramE3ELNS_16BlastTabularSpecE1EENST_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SM_EENS1N_ISX_SZ_EENS16_IS11_S13_EEEEE_EEvRNS1M_INS1N_IT_S1K_EENS1N_IT1_T2_EENS16_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_popIterators.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2091,14 +2001,16 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, - inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, - inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_popIterators.isra': +/usr/include/c++/13/new: In member function 'insertStream': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2110,14 +2022,16 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, - inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, - inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_popIterators.isra': +/usr/include/c++/13/new: In member function 'insertStream': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2129,14 +2043,16 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, - inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, - inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators.isra' at /usr/include/seqan/index/find2_backtracking.h:707:0: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_popIterators.isra': +/usr/include/c++/13/new: In member function 'insertStream': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2153,7 +2069,7 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ @@ -2174,11 +2090,12 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, + inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new: In function 'append': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2195,11 +2112,16 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, + inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, + inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, + inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, + inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new: In member function 'process.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2216,11 +2138,16 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, + inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, + inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, + inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, + inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new: In member function 'process.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2238,11 +2165,15 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13: + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, + inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, + inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, + inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, + inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function 'append': +/usr/include/c++/13/new: In member function 'process.isra': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2314,6 +2245,25 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:18, + inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:11, + inlined from '_toText' at /usr/include/seqan/arg_parse/arg_parse_ctd_support.h:88:30: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967248' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In function '_toText': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, @@ -2395,6 +2345,90 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:424:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'insertStream' at /usr/include/seqan/index/pipe_merger7.h:433:21: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In member function 'insertStream': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, @@ -2703,11 +2737,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2733,11 +2767,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2761,11 +2795,13 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, + inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2780,7 +2816,7 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, @@ -2791,11 +2827,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7FMIndexIv19LambdaFMIndexConfigEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEENS_7IndexSaIvEENSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1F_EE15LocalDataHolderI16GlobalDataHolderISN_SY_NSJ_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SY_EENS1Z_IS19_S1B_EENS1I_IS1D_S1F_EEEEE_EEvRNS1Y_INS1Z_IT_S1W_EENS1Z_IT1_T2_EENS1I_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2810,7 +2846,7 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, @@ -2821,11 +2857,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2840,9 +2876,10 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, - inlined from '_popState' at /usr/include/seqan/index/find2_backtracking.h:689:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1319:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, + inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, @@ -2850,11 +2887,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2878,13 +2915,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2899,7 +2934,7 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, @@ -2910,11 +2945,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE0EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2929,7 +2964,7 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, @@ -2940,11 +2975,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -2959,10 +2994,9 @@ inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, - inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:708:0, - inlined from '_pushState' at /usr/include/seqan/index/find2_backtracking.h:442:18, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1311:0, - inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, + inlined from '_popIterators' at /usr/include/seqan/index/find2_backtracking.h:707:0, + inlined from '_popState' at /usr/include/seqan/index/find2_backtracking.h:689:0, + inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1319:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, @@ -2970,11 +3004,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_5Dna5_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE0ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -3120,11 +3154,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -3150,11 +3184,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -3180,11 +3214,11 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ @@ -3210,14 +3244,16 @@ inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1315:0, inlined from '_find' at /usr/include/seqan/index/find2_backtracking.h:1281:1, - inlined from '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: + inlined from '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0' at /usr/include/seqan/index/find2_backtracking.h:1315:0: /usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967208' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 211 | data = (TValue *) operator new(count * sizeof(TValue)); | ^ -/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_IS5_NS_5AllocIvEEEENS_12InfixSegmentEEENSF_INS_3TagINS_8Default_EEEEEEESL_NSS_INS_16HammingDistance_EEENSS_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSS_INS_9TagExact_EEES10_EE15LocalDataHolderI16GlobalDataHolderIS5_SL_NSS_INS_13BlastTabular_EEELNS_12BlastProgramE4ELNS_16BlastTabularSpecE1EENSS_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISJ_SL_EENS1K_ISW_SL_EENS13_ISY_S10_EEEEE_EEvRNS1J_INS1K_IT_S1H_EENS1K_IT1_T2_EENS13_IT3_T4_EEEERT6_RKT5_.part.0': +/usr/include/c++/13/new: In function '_ZN5seqan5_findINS_9StringSetINS_14ModifiedStringINS_6StringINS_10SimpleTypeIhNS_10AminoAcid_EEENS_4MMapINS_10MMapConfigINS_4FileINS_5AsyncIvEEEEjEEEEEENS_7ModViewINS_14FunctorConvertIS6_NS4_IhNS_17ReducedAminoAcid_INS_3TagINS_9Murphy10_EEEEEEEEEEEEENS_5OwnerINS_12ConcatDirectIvEEEEEENS_7IndexSaIvEENS1_INS_7SegmentINS2_INS3_IS6_NS_5AllocIvEEEESP_EENS_12InfixSegmentEEENSR_INSJ_INS_8Default_EEEEEEESX_NSJ_INS_16HammingDistance_EEENSJ_INS_23BacktrackingSemiGlobal_EEENS_11StageExact_EZ19__searchDoubleIndexINS_12BacktrackingINSJ_INS_9TagExact_EEES1C_EE15LocalDataHolderI16GlobalDataHolderISN_SX_NSJ_INS_12BlastReport_EEELNS_12BlastProgramE1ELNS_16BlastTabularSpecE0EENSJ_INS_11AffineGaps_EEEEEvRT0_EUlRKNS_7Finder_INS_5IndexISV_SX_EENS1W_IS18_SX_EENS1F_IS1A_S1C_EEEEE_EEvRNS1V_INS1W_IT_S1T_EENS1W_IT1_T2_EENS1F_IT3_T4_EEEERT6_RKT5_.part.0': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ +make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' +[100%] Built target lambda_indexer In function 'allocate', inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, @@ -3406,6 +3442,32 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, + inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, + inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, + inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, + inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, + inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In member function 'process.isra': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, @@ -3466,32 +3528,6 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, - inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, - inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, - inlined from 'assign' at /usr/include/seqan/pipe/pool_base.h:1369:42, - inlined from 'operator<<' at /usr/include/seqan/pipe/pool_base.h:1376:22, - inlined from 'process.isra' at /usr/include/seqan/index/index_skew7_multi.h:328:26: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In member function 'process.isra': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, @@ -3695,6 +3731,27 @@ inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, + inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, + inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, + inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, + inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, + inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, + inlined from 'operator++.isra' at /usr/include/seqan/index/pipe_merger3.h:127:17: +/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] + 211 | data = (TValue *) operator new(count * sizeof(TValue)); + | ^ +/usr/include/c++/13/new: In member function 'operator++.isra': +/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here + 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) + | ^ +In function 'allocate', + inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, + inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, + inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, + inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, + inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:0, inlined from 'resize' at /usr/include/seqan/sequence/sequence_interface.h:1149:0, inlined from 'eraseBack' at /usr/include/seqan/sequence/sequence_interface.h:1259:0, @@ -3760,27 +3817,6 @@ inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, - inlined from 'operator++.isra' at /usr/include/seqan/index/pipe_merger3.h:127:17: -/usr/include/seqan/basic/allocator_interface.h:211:35: warning: argument 1 value '4294967256' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] - 211 | data = (TValue *) operator new(count * sizeof(TValue)); - | ^ -/usr/include/c++/13/new: In member function 'operator++.isra': -/usr/include/c++/13/new:126:26: note: in a call to allocation function 'operator new' declared here - 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) - | ^ -In function 'allocate', - inlined from '_allocateStorage' at /usr/include/seqan/sequence/string_alloc.h:372:13, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1532:28, - inlined from '_reallocateStorage' at /usr/include/seqan/sequence/string_base.h:1577:30, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1679:83, - inlined from '_reserveStorage' at /usr/include/seqan/sequence/string_base.h:1665:1, - inlined from 'reserve' at /usr/include/seqan/sequence/string_base.h:1697:20, - inlined from 'resize_' at /usr/include/seqan/sequence/string_base.h:1725:45, - inlined from 'resize' at /usr/include/seqan/sequence/string_base.h:1785:50, - inlined from 'pop' at /usr/include/seqan/misc/priority_type_heap.h:289:11, - inlined from 'pop' at /usr/include/seqan/pipe/pool_sorter.h:260:31, - inlined from 'pop' at /usr/include/seqan/pipe/pool_base.h:613:42, - inlined from 'operator++' at /usr/include/seqan/pipe/pool_base.h:870:24, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_namer.h:114:13, inlined from 'operator++' at /usr/include/seqan/pipe/pipe_filter.h:129:13, inlined from 'append' at /usr/include/seqan/pipe/pool_base.h:1330:13, @@ -4748,7 +4784,7 @@ dh_testroot -O--builddirectory=build dh_prep -O--builddirectory=build dh_auto_install --destdir=debian/lambda-align/ -O--builddirectory=build - cd build && make -j3 install DESTDIR=/build/reproducible-path/lambda-align-1.0.3/debian/lambda-align AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd build && make -j4 install DESTDIR=/build/reproducible-path/lambda-align-1.0.3/debian/lambda-align AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' /usr/bin/cmake -S/build/reproducible-path/lambda-align-1.0.3 -B/build/reproducible-path/lambda-align-1.0.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/lambda-align-1.0.3/build/CMakeFiles /build/reproducible-path/lambda-align-1.0.3/build//CMakeFiles/progress.marks @@ -4757,13 +4793,13 @@ make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' -cd /build/reproducible-path/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/lambda-align-1.0.3 /build/reproducible-path/lambda-align-1.0.3/src /build/reproducible-path/lambda-align-1.0.3/build /build/reproducible-path/lambda-align-1.0.3/build/src /build/reproducible-path/lambda-align-1.0.3/build/src/CMakeFiles/lambda.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' cd /build/reproducible-path/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/lambda-align-1.0.3 /build/reproducible-path/lambda-align-1.0.3/src /build/reproducible-path/lambda-align-1.0.3/build /build/reproducible-path/lambda-align-1.0.3/build/src /build/reproducible-path/lambda-align-1.0.3/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' -make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build +cd /build/reproducible-path/lambda-align-1.0.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/lambda-align-1.0.3 /build/reproducible-path/lambda-align-1.0.3/src /build/reproducible-path/lambda-align-1.0.3/build /build/reproducible-path/lambda-align-1.0.3/build/src /build/reproducible-path/lambda-align-1.0.3/build/src/CMakeFiles/lambda.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build +make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' +make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Entering directory '/build/reproducible-path/lambda-align-1.0.3/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda_indexer.dir/build'. make[3]: Leaving directory '/build/reproducible-path/lambda-align-1.0.3/build' @@ -4840,12 +4876,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15347/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/32242 and its subdirectories -I: Current time: Mon Apr 8 01:39:50 -12 2024 -I: pbuilder-time-stamp: 1712583590 +I: removing directory /srv/workspace/pbuilder/15347 and its subdirectories +I: Current time: Tue Apr 9 04:14:04 +14 2024 +I: pbuilder-time-stamp: 1712585644