Diff of the two buildlogs: -- --- b1/build.log 2024-11-06 13:50:32.005782627 +0000 +++ b2/build.log 2024-11-06 13:59:20.518946182 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Nov 6 01:42:55 -12 2024 -I: pbuilder-time-stamp: 1730900575 +I: Current time: Thu Nov 7 03:51:08 +14 2024 +I: pbuilder-time-stamp: 1730901068 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/6915/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/D01_modify_environment starting +debug: Running on virt32b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 6 13:51 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='12ea65a6604946a8afeabcd2a66bbea5' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='6915' - PS1='# ' - PS2='> ' + INVOCATION_ID=2811962ae43745d28e3e082694fb65f2 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=25131 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlrhHvzw/pbuilderrc_2ihR --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlrhHvzw/b1 --logfile b1/build.log fenicsx-performance-tests_0.8.0-1.dsc' - SUDO_GID='114' - SUDO_UID='108' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlrhHvzw/pbuilderrc_W4dE --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlrhHvzw/b2 --logfile b2/build.log fenicsx-performance-tests_0.8.0-1.dsc' + SUDO_GID=112 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt64a 6.1.0-26-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-26-armmp-lpae #1 SMP Debian 6.1.112-1 (2024-09-30) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/6915/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -409,7 +441,7 @@ Get: 287 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 75.2.0-1 [731 kB] Get: 288 http://deb.debian.org/debian unstable/main armhf python3-ffcx all 1:0.8.0-1 [100 kB] Get: 289 http://deb.debian.org/debian unstable/main armhf libdolfinx-dev armhf 1:0.8.0-12 [208 kB] -Fetched 181 MB in 33s (5527 kB/s) +Fetched 181 MB in 10s (18.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19688 files and directories currently installed.) @@ -1342,8 +1374,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Nov 6 13:45:02 UTC 2024. -Universal Time is now: Wed Nov 6 13:45:02 UTC 2024. +Local time is now: Wed Nov 6 13:54:22 UTC 2024. +Universal Time is now: Wed Nov 6 13:54:22 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:armhf (1.83.0-3.2) ... @@ -1635,7 +1667,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.8.0-1_source.changes +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.8.0-1_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.8.0-1 dpkg-buildpackage: info: source distribution unstable @@ -1726,7 +1762,7 @@ -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall --- Configuring done (53.4s) +-- Configuring done (7.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -1739,7 +1775,7 @@ -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src - cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks @@ -1747,20 +1783,22 @@ make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' -[ 9%] Generating Elasticity.c -ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Elasticity.py [ 18%] Generating Poisson.c +[ 18%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Poisson.py +ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Elasticity.py cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' -[ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -[ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o +[ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/main.cpp -[ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o +[ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp +[ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp +[ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o +/usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp In file included from /usr/include/c++/14/bits/stl_algo.h:61, from /usr/include/c++/14/algorithm:61, from /usr/include/dolfinx/common/MPI.h:9, @@ -1808,32 +1846,21 @@ | ^~~ /usr/include/dolfinx/mesh/Geometry.h:423:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/Geometry.h:423:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp: In function 'void {anonymous}::unpack_fn(std::span, std::span, std::span, std::function)': +/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 39 | void unpack_fn(std::span in, std::span idx, + | ^~~~~~~~~ +/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.h:9, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:7: -/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': -/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 285 | void apply_tranpose_matrix_right( - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.h:9, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, - from /usr/include/dolfinx/fem/assembler.h:9, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:16: -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 1; auto:154 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, - | ^~~~ -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 3; auto:154 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 2; auto:154 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/refinement/plaza.h:7, from /usr/include/dolfinx/refinement/refine.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp:16: @@ -1848,6 +1875,32 @@ /usr/include/dolfinx/refinement/plaza.h:408:34: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 408 | simplex_set = get_simplices(indices, longest_edge, tdim, uniform); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, + from /usr/include/dolfinx/fem/assembler.h:9, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:17: +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:156) [with T = double; int _bs = 1; auto:156 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, + | ^~~~ +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:156) [with T = double; int _bs = 3; auto:156 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:156) [with T = double; int _bs = 2; auto:156 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +In file included from /usr/include/basix/finite-element.h:12, + from /usr/include/dolfinx/fem/FiniteElement.h:11, + from /usr/include/dolfinx/fem/Function.h:10, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.h:9, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:7: +/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': +/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 285 | void apply_tranpose_matrix_right( + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': +/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 243 | void apply_matrix( + | ^~~~~~~~~~~~ +/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/c++/14/bits/stl_uninitialized.h:63, from /usr/include/c++/14/memory:69, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.h:7, @@ -1875,6 +1928,17 @@ /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, + from /usr/include/dolfinx/fem/assembler.h:9, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:16: +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 1; auto:154 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, + | ^~~~ +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 3; auto:154 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 2; auto:154 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]': /usr/include/dolfinx/common/MPI.h:461:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | distribute_from_postoffice(MPI_Comm comm, std::span indices, @@ -1903,7 +1967,7 @@ /usr/include/dolfinx/common/MPI.h:676:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 676 | distribute_data(MPI_Comm comm0, std::span indices, | ^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:11: +In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:14: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 483 | void set(std::span x, T scale = 1) const @@ -1940,21 +2004,16 @@ | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In file included from /usr/include/dolfinx/fem/Function.h:11: -/usr/include/dolfinx/fem/FunctionSpace.h: In member function 'std::vector dolfinx::fem::FunctionSpace::tabulate_dof_coordinates(bool) const [with T = double]': -/usr/include/dolfinx/fem/FunctionSpace.h:276:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 276 | cmap.tabulate(0, X, Xshape, phi_b); - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/mesh/generation.h: In function 'dolfinx::mesh::Mesh dolfinx::mesh::impl::build_tet(MPI_Comm, MPI_Comm, std::array, 2>, std::array, const dolfinx::mesh::CellPartitionFunction&) [with T = double]': -/usr/include/dolfinx/mesh/generation.h:374:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 374 | {x.size() / 3, 3}, partitioner); - | ^ -/usr/include/dolfinx/mesh/generation.h:374:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/mesh/generation.h: In function 'dolfinx::mesh::Mesh dolfinx::mesh::impl::build_tet(MPI_Comm, MPI_Comm, std::array, 2>, std::array, const dolfinx::mesh::CellPartitionFunction&) [with T = double]': +/usr/include/dolfinx/mesh/generation.h:374:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 374 | {x.size() / 3, 3}, partitioner); + | ^ +/usr/include/dolfinx/mesh/generation.h:374:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, const U&, std::array, GhostMode) [with U = std::vector >]': /usr/include/dolfinx/mesh/utils.h:934:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 934 | create_mesh(MPI_Comm comm, std::span cells, @@ -1967,6 +2026,8 @@ 944 | create_cell_partitioner(ghost_mode)); | ^ /usr/include/dolfinx/mesh/utils.h:944:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +[ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o +/usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::span]': /usr/include/dolfinx/common/MPI.h:461:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | distribute_from_postoffice(MPI_Comm comm, std::span indices, @@ -2060,15 +2121,89 @@ 487 | redistribute, ghost_mode), | ~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/refinement/plaza.h:486:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:11: +/usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': +/usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 483 | void set(std::span x, T scale = 1) const + | ^~~ +In file included from /usr/include/dolfinx/fem/Function.h:11: +/usr/include/dolfinx/fem/FunctionSpace.h: In member function 'std::vector dolfinx::fem::FunctionSpace::tabulate_dof_coordinates(bool) const [with T = double]': +/usr/include/dolfinx/fem/FunctionSpace.h:276:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 276 | cmap.tabulate(0, X, Xshape, phi_b); + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/dolfinx/fem/Function.h:12: +/usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': +/usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 72 | cmap.tabulate(0, X, Xshape, phi_b); + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': +/usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, + | ^~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': +/usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); + | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, + from /usr/include/dolfinx/fem/FunctionSpace.h:9, + from /usr/include/dolfinx/fem/Function.h:11: +/usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': +/usr/include/dolfinx/common/math.h:86:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 86 | auto det(Matrix A) + | ^~~ +/usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': +/usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 131 | compute_jacobian_determinant(const U& J, std::span w) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o +/usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mem.cpp +/usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': +/usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 124 | void inv(U A, V B) + | ^~~ +/usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': +/usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 211 | void pinv(U A, V P) + | ^~~~ +/usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 +/usr/include/dolfinx/common/math.h:245:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 245 | inv(ATA, Inv); + | ~~~^~~~~~~~~~ +/usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': +/usr/include/dolfinx/fem/interpolate.h:739:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 739 | void interpolate(Function& u, std::span f, + | ^~~~~~~~~~~ +/usr/include/dolfinx/fem/interpolate.h:989:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 989 | cmap.tabulate(1, X, Xshape, phi_b); + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/interpolate.h:1043:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1043 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', + inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1042:38: +/usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 121 | math::pinv(J, K); + | ~~~~~~~~~~^~~~~~ +/usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': +/usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 261 | _fshape, cells); + | ~~~~~~~~~~~~~~~ +[ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o +/usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/Elasticity.c /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( @@ -2169,6 +2304,11 @@ 1597 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +In file included from /usr/include/dolfinx/fem/assembler.h:11: +/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': +/usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1122 | void assemble_vector( + | ^~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:565:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:365:17, @@ -2223,231 +2363,6 @@ /usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 131 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -/usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp -/usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': -/usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 124 | void inv(U A, V B) - | ^~~ -/usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 -/usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': -/usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 211 | void pinv(U A, V P) - | ^~~~ -/usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 -/usr/include/dolfinx/common/math.h:245:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 245 | inv(ATA, Inv); - | ~~~^~~~~~~~~~ -/usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': -/usr/include/dolfinx/fem/interpolate.h:739:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 739 | void interpolate(Function& u, std::span f, - | ^~~~~~~~~~~ -/usr/include/dolfinx/fem/interpolate.h:989:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 989 | cmap.tabulate(1, X, Xshape, phi_b); - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/interpolate.h:1043:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1043 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', - inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1042:38: -/usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 121 | math::pinv(J, K); - | ~~~~~~~~~~^~~~~~ -/usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 -/usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': -/usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 261 | _fshape, cells); - | ~~~~~~~~~~~~~~~ -In file included from /usr/include/dolfinx/fem/assembler.h:11: -/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': -/usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1122 | void assemble_vector( - | ^~~~~~~~~~~~~~~ -[ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -/usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp -/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_exterior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:181, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:182, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:183, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:181 = std::function; auto:182 = std::function, std::span, int, int)>; auto:183 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/assemble_vector_impl.h:258:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 258 | void _lift_bc_exterior_facets( - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_cells(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:178, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:179, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:180, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs0 = -1; int _bs1 = -1; auto:178 = std::function; auto:179 = std::function, std::span, int, int)>; auto:180 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/assemble_vector_impl.h:75:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 75 | void _lift_bc_cells( - | ^~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_interior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:184, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:185, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:186, std::span, std::span, int, std::span, std::span, const std::function&, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:184 = std::function; auto:185 = std::function, std::span, int, int)>; auto:186 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/assemble_vector_impl.h:399:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 399 | void _lift_bc_interior_facets( - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::lift_bc(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&, std::span, std::span, std::span, T) [with T = double; U = double]': -/usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 902 | void lift_bc(std::span b, const Form& a, mdspan2_t x_dofmap, - | ^~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -/usr/include/dolfinx/fem/assemble_vector_impl.h:976:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 976 | _lift_bc_cells(b, x_dofmap, x, kernel, cells, - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 977 | {dofmap0, bs0, a.domain(IntegralType::cell, i, *mesh0)}, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 978 | P0, - | ~~~ - 979 | {dofmap1, bs1, a.domain(IntegralType::cell, i, *mesh1)}, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 980 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 981 | bc_values1, bc_markers1, x0, scale); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h:991:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 991 | _lift_bc_exterior_facets( - | ~~~~~~~~~~~~~~~~~~~~~~~~^ - 992 | b, x_dofmap, x, kernel, a.domain(IntegralType::exterior_facet, i), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 993 | {dofmap0, bs0, a.domain(IntegralType::exterior_facet, i, *mesh0)}, P0, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 994 | {dofmap1, bs1, a.domain(IntegralType::exterior_facet, i, *mesh1)}, P1T, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 995 | constants, coeffs, cstride, cell_info0, cell_info1, bc_values1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 996 | bc_markers1, x0, scale); - | ~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h:1021:31: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1021 | _lift_bc_interior_facets( - | ~~~~~~~~~~~~~~~~~~~~~~~~^ - 1022 | b, x_dofmap, x, num_cell_facets, kernel, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1023 | a.domain(IntegralType::interior_facet, i), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1024 | {dofmap0, bs0, a.domain(IntegralType::interior_facet, i, *mesh0)}, P0, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1025 | {dofmap1, bs1, a.domain(IntegralType::interior_facet, i, *mesh1)}, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1026 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, get_perm, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1027 | bc_values1, bc_markers1, x0, scale); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void dolfinx::fem::impl::apply_lifting(std::span<_Type, 4294967295>, std::vector > >, mdspan2_t, std::span >, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]', - inlined from 'void dolfinx::fem::apply_lifting(std::span<_Type, 4294967295>, const std::vector > >&, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:172:27: -/usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1101 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1102 | bc_markers1, x0[j], scale); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'const std::span' changed in GCC 7.1 -/usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1106 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, - | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1107 | bc_markers1, std::span(), scale); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]', - inlined from 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:113:24, - inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:214:26: -/usr/include/dolfinx/fem/assemble_vector_impl.h:1279:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1279 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1280 | constants, coefficients); - | ~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', - inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:220:25: -/usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 461 | bc->set(b, scale); - | ~~~~~~~^~~~~~~~~~ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp: In function 'void {anonymous}::unpack_fn(std::span, std::span, std::span, std::function)': -/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 39 | void unpack_fn(std::span in, std::span idx, - | ^~~~~~~~~ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In file included from /usr/include/basix/finite-element.h:12, - from /usr/include/dolfinx/fem/FiniteElement.h:11, - from /usr/include/dolfinx/fem/Function.h:10, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.h:9, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:7: -/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': -/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 243 | void apply_matrix( - | ^~~~~~~~~~~~ -/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, - from /usr/include/dolfinx/fem/assembler.h:9, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:17: -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:156) [with T = double; int _bs = 1; auto:156 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, - | ^~~~ -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:156) [with T = double; int _bs = 3; auto:156 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:156) [with T = double; int _bs = 2; auto:156 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -[ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -/usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mem.cpp -In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:14: -/usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': -/usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 483 | void set(std::span x, T scale = 1) const - | ^~~ -In file included from /usr/include/dolfinx/fem/Function.h:12: -/usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': -/usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 72 | cmap.tabulate(0, X, Xshape, phi_b); - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/basix/finite-element.h:12, - from /usr/include/dolfinx/fem/FiniteElement.h:11, - from /usr/include/dolfinx/fem/Function.h:10, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.h:9, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:7: -/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': -/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 285 | void apply_tranpose_matrix_right( - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': -/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 243 | void apply_matrix( - | ^~~~~~~~~~~~ -/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, - from /usr/include/dolfinx/fem/assembler.h:9, - from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:15: -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 1; auto:154 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, - | ^~~~ -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 3; auto:154 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 2; auto:154 = std::function, std::span, int, int)>]': -/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -[ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -/usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/Elasticity.c -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': -/usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, - | ^~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': -/usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); - | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 -In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, - from /usr/include/dolfinx/fem/FunctionSpace.h:9, - from /usr/include/dolfinx/fem/Function.h:11: -/usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': -/usr/include/dolfinx/common/math.h:86:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 - 86 | auto det(Matrix A) - | ^~~ -/usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': -/usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 131 | compute_jacobian_determinant(const U& J, std::span w) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:12: -/usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': -/usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 483 | void set(std::span x, T scale = 1) const - | ^~~ -In file included from /usr/include/dolfinx/fem/Function.h:12: -/usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': -/usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 72 | cmap.tabulate(0, X, Xshape, phi_b); - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 124 | void inv(U A, V B) @@ -2477,17 +2392,6 @@ 121 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 -/usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': -/usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 261 | _fshape, cells); - | ~~~~~~~~~~~~~~~ -In file included from /usr/include/dolfinx/fem/assembler.h:11: -/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': -/usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1122 | void assemble_vector( - | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1279:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1279 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), @@ -2594,10 +2498,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1667 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': -/usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, - | ^~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assembler.h: In function 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&) [with T = double; U = double]': /usr/include/dolfinx/fem/assembler.h:121:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 121 | void assemble_vector(std::span b, const Form& L) @@ -2621,6 +2521,154 @@ | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 | [](T /*a*/, T b) { return b; }); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': +/usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 261 | _fshape, cells); + | ~~~~~~~~~~~~~~~ +In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', + inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:153:25: +/usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 461 | bc->set(b, scale); + | ~~~~~~~^~~~~~~~~~ +In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', + inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:160:25: +/usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 461 | bc->set(b, scale); + | ~~~~~~~^~~~~~~~~~ +In file included from /usr/include/dolfinx/fem/assembler.h:11: +/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': +/usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1122 | void assemble_vector( + | ^~~~~~~~~~~~~~~ +In file included from /usr/include/basix/finite-element.h:12, + from /usr/include/dolfinx/fem/FiniteElement.h:11, + from /usr/include/dolfinx/fem/Function.h:10, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.h:9, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:7: +/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': +/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 285 | void apply_tranpose_matrix_right( + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': +/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 + 243 | void apply_matrix( + | ^~~~~~~~~~~~ +/usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_exterior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:181, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:182, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:183, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:181 = std::function; auto:182 = std::function, std::span, int, int)>; auto:183 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/assemble_vector_impl.h:258:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 258 | void _lift_bc_exterior_facets( + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_cells(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:178, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:179, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:180, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs0 = -1; int _bs1 = -1; auto:178 = std::function; auto:179 = std::function, std::span, int, int)>; auto:180 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/assemble_vector_impl.h:75:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 75 | void _lift_bc_cells( + | ^~~~~~~~~~~~~~ +In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, + from /usr/include/dolfinx/fem/assembler.h:9, + from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:15: +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 1; auto:154 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, + | ^~~~ +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 3; auto:154 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:154) [with T = double; int _bs = 2; auto:154 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_interior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:184, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:185, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:186, std::span, std::span, int, std::span, std::span, const std::function&, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:184 = std::function; auto:185 = std::function, std::span, int, int)>; auto:186 = std::function, std::span, int, int)>]': +/usr/include/dolfinx/fem/assemble_vector_impl.h:399:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 399 | void _lift_bc_interior_facets( + | ^~~~~~~~~~~~~~~~~~~~~~~~ +[ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o +/usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/Poisson.c +/usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::lift_bc(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&, std::span, std::span, std::span, T) [with T = double; U = double]': +/usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 902 | void lift_bc(std::span b, const Form& a, mdspan2_t x_dofmap, + | ^~~~~~~ +/usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/assemble_vector_impl.h:976:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 976 | _lift_bc_cells(b, x_dofmap, x, kernel, cells, + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 977 | {dofmap0, bs0, a.domain(IntegralType::cell, i, *mesh0)}, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 978 | P0, + | ~~~ + 979 | {dofmap1, bs1, a.domain(IntegralType::cell, i, *mesh1)}, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 980 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 981 | bc_values1, bc_markers1, x0, scale); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/assemble_vector_impl.h:991:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 991 | _lift_bc_exterior_facets( + | ~~~~~~~~~~~~~~~~~~~~~~~~^ + 992 | b, x_dofmap, x, kernel, a.domain(IntegralType::exterior_facet, i), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 993 | {dofmap0, bs0, a.domain(IntegralType::exterior_facet, i, *mesh0)}, P0, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 994 | {dofmap1, bs1, a.domain(IntegralType::exterior_facet, i, *mesh1)}, P1T, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 995 | constants, coeffs, cstride, cell_info0, cell_info1, bc_values1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 996 | bc_markers1, x0, scale); + | ~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/assemble_vector_impl.h:1021:31: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1021 | _lift_bc_interior_facets( + | ~~~~~~~~~~~~~~~~~~~~~~~~^ + 1022 | b, x_dofmap, x, num_cell_facets, kernel, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1023 | a.domain(IntegralType::interior_facet, i), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1024 | {dofmap0, bs0, a.domain(IntegralType::interior_facet, i, *mesh0)}, P0, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1025 | {dofmap1, bs1, a.domain(IntegralType::interior_facet, i, *mesh1)}, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1026 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, get_perm, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1027 | bc_values1, bc_markers1, x0, scale); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void dolfinx::fem::impl::apply_lifting(std::span<_Type, 4294967295>, std::vector > >, mdspan2_t, std::span >, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]', + inlined from 'void dolfinx::fem::apply_lifting(std::span<_Type, 4294967295>, const std::vector > >&, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:172:27: +/usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1101 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1102 | bc_markers1, x0[j], scale); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'const std::span' changed in GCC 7.1 +/usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1106 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, + | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1107 | bc_markers1, std::span(), scale); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 +In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:12: +/usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': +/usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 483 | void set(std::span x, T scale = 1) const + | ^~~ +In file included from /usr/include/dolfinx/fem/Function.h:12: +/usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': +/usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 72 | cmap.tabulate(0, X, Xshape, phi_b); + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]', + inlined from 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:113:24, + inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:214:26: +/usr/include/dolfinx/fem/assemble_vector_impl.h:1279:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1279 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1280 | constants, coefficients); + | ~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', + inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:220:25: +/usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 461 | bc->set(b, scale); + | ~~~~~~~^~~~~~~~~~ +/usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': +/usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 + 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, + | ^~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); @@ -2637,18 +2685,6 @@ /usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 131 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -/usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/Poisson.c -In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', - inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:153:25: -/usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 461 | bc->set(b, scale); - | ~~~~~~~^~~~~~~~~~ -In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', - inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:160:25: -/usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 - 461 | bc->set(b, scale); - | ~~~~~~~^~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 124 | void inv(U A, V B) @@ -2930,64 +2966,64 @@ make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf ==== elasticity weak scaling (3 processes with ndofs=10000) ==== -2024-11-06 01:49:10.322 ( 0.060s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-11-06 01:49:10.322 ( 0.060s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-11-06 01:49:10.322 ( 0.060s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:10.367 ( 0.105s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-11-06 01:49:10.367 ( 0.106s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:10.368 ( 0.106s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:10.368 ( 0.106s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-11-06 01:49:10.370 ( 0.109s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) -2024-11-06 01:49:10.370 ( 0.109s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-11-06 01:49:15.844 ( 5.582s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:15.844 ( 5.582s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:15.848 ( 5.587s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:15.890 ( 5.629s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 16541-1122 -2024-11-06 01:49:15.896 ( 5.634s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-11-06 01:49:15.896 ( 5.635s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-11-06 01:49:15.906 ( 5.644s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:15.906 ( 5.645s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:15.914 ( 5.652s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-11-06 01:49:15.914 ( 5.652s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-11-06 01:49:15.914 ( 5.652s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-11-06 01:49:15.917 ( 5.655s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:15.917 ( 5.655s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:15.924 ( 5.663s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:15.925 ( 5.663s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:15.925 ( 5.663s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:15.925 ( 5.663s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:15.929 ( 5.668s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:15.929 ( 5.668s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:15.929 ( 5.668s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-11-06 01:49:15.930 ( 5.668s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:15.930 ( 5.668s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:15.930 ( 5.668s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-11-06 01:49:15.931 ( 5.669s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:15.931 ( 5.670s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17077x4 -2024-11-06 01:49:15.939 ( 5.678s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:15.939 ( 5.678s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:15.940 ( 5.678s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:15.940 ( 5.679s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:15.940 ( 5.679s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:45.817 ( 0.116s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2024-11-07 03:57:45.817 ( 0.117s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2024-11-07 03:57:45.817 ( 0.117s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:57:45.929 ( 0.228s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2024-11-07 03:57:45.929 ( 0.229s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:45.930 ( 0.229s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:45.930 ( 0.229s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2024-11-07 03:57:45.938 ( 0.237s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) +2024-11-07 03:57:45.938 ( 0.237s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2024-11-07 03:57:51.814 ( 6.113s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:57:51.831 ( 6.131s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:57:51.874 ( 6.173s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:57:51.920 ( 6.219s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 1328-17150 +2024-11-07 03:57:51.925 ( 6.224s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2024-11-07 03:57:51.925 ( 6.225s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2024-11-07 03:57:52.006 ( 6.306s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:57:52.006 ( 6.306s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:57:52.026 ( 6.325s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2024-11-07 03:57:52.026 ( 6.325s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2024-11-07 03:57:52.026 ( 6.325s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2024-11-07 03:57:52.029 ( 6.328s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:57:52.029 ( 6.328s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:57:52.036 ( 6.335s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.048 ( 6.348s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:52.048 ( 6.348s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.048 ( 6.348s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:52.056 ( 6.356s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:57:52.057 ( 6.356s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:57:52.057 ( 6.356s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2024-11-07 03:57:52.057 ( 6.356s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.057 ( 6.356s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:52.057 ( 6.356s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2024-11-07 03:57:52.058 ( 6.357s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:57:52.058 ( 6.357s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17548x4 +2024-11-07 03:57:52.065 ( 6.364s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:57:52.065 ( 6.364s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:57:52.065 ( 6.365s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:57:52.078 ( 6.377s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.078 ( 6.377s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times -2024-11-06 01:49:15.943 ( 5.682s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-11-06 01:49:15.963 ( 5.701s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:15.977 ( 5.715s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:16.058 ( 5.796s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:16.058 ( 5.796s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:16.060 ( 5.799s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-11-06 01:49:16.060 ( 5.799s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-11-06 01:49:16.064 ( 5.802s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:16.064 ( 5.802s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17077x4 -2024-11-06 01:49:16.071 ( 5.809s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:16.071 ( 5.809s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:16.072 ( 5.810s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:16.072 ( 5.810s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:16.072 ( 5.810s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:16.073 ( 5.811s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:16.074 ( 5.812s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:16.074 ( 5.812s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-11-06 01:49:16.116 ( 5.854s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 216 to 557 +2024-11-07 03:57:52.085 ( 6.384s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2024-11-07 03:57:52.105 ( 6.404s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.139 ( 6.439s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:52.311 ( 6.611s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.312 ( 6.611s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:52.314 ( 6.613s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2024-11-07 03:57:52.314 ( 6.613s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2024-11-07 03:57:52.325 ( 6.624s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:57:52.325 ( 6.625s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17548x4 +2024-11-07 03:57:52.340 ( 6.640s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:57:52.341 ( 6.640s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:57:52.341 ( 6.640s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:57:52.341 ( 6.641s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:52.341 ( 6.641s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:52.342 ( 6.642s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:57:52.343 ( 6.642s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:57:52.343 ( 6.642s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2024-11-07 03:57:52.421 ( 6.720s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 210 to 540 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -3001,7 +3037,7 @@ Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- -2024-11-06 01:49:16.535 ( 6.274s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2024-11-07 03:57:52.989 ( 7.288s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3020,7 +3056,7 @@ Number of levels of aggressive coarsening 1 Square graph aggressive coarsening Number smoothing steps 1 - Complexity: grid = 1.0954 operator = 1.39745 + Complexity: grid = 1.0926 operator = 1.37138 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly @@ -3045,34 +3081,34 @@ tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd - factor fill ratio given 5., needed 1.09563 + factor fill ratio given 5., needed 1.12111 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=234, cols=234, bs=6 + rows=228, cols=228, bs=6 package used to perform factorization: petsc - total: nonzeros=47844, allocated nonzeros=47844 - using I-node routines: found 63 nodes, limit used is 5 + total: nonzeros=46656, allocated nonzeros=46656 + using I-node routines: found 67 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=234, cols=234, bs=6 - total: nonzeros=43668, allocated nonzeros=43668 + rows=228, cols=228, bs=6 + total: nonzeros=41616, allocated nonzeros=41616 total number of mallocs used during MatSetValues calls=0 - using I-node routines: found 77 nodes, limit used is 5 + using I-node routines: found 76 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=234, cols=234, bs=6 - total: nonzeros=43668, allocated nonzeros=43668 + rows=228, cols=228, bs=6 + total: nonzeros=41616, allocated nonzeros=41616 total number of mallocs used during MatSetValues calls=0 - using I-node (on process 0) routines: found 77 nodes, limit used is 5 + using I-node (on process 0) routines: found 76 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.263395, max 2.89735 - eigenvalues provided (min 0.0466716, max 2.63395) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.260702, max 2.86772 + eigenvalues provided (min 0.0268319, max 2.60702) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -3083,18 +3119,18 @@ linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=2628, cols=2628, bs=6 - total: nonzeros=453744, allocated nonzeros=453744 + rows=2550, cols=2550, bs=6 + total: nonzeros=423180, allocated nonzeros=423180 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 256 nodes, limit used is 5 + using I-node (on process 0) routines: found 274 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.258141, max 2.83955 - eigenvalues provided (min 0.0719659, max 2.58141) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.258265, max 2.84092 + eigenvalues provided (min 0.0738452, max 2.58265) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -3109,7 +3145,7 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3346 nodes, limit used is 5 + using I-node (on process 0) routines: found 3421 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes @@ -3118,46 +3154,46 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3346 nodes, limit used is 5 + using I-node (on process 0) routines: found 3421 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 5.630000 5.630000 -Build dofmap data | 2 0.010000 0.020000 -Build sparsity | 1 0.010000 0.010000 -Compute connectivity 2-0 | 1 0.000000 0.000000 +Build BoxMesh (tetrahedra) | 1 6.280000 6.280000 +Build dofmap data | 2 0.020000 0.040000 +Build sparsity | 1 0.030000 0.030000 +Compute connectivity 2-0 | 1 0.020000 0.020000 Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.120000 0.120000 -Compute graph partition (SCOTCH) | 1 5.470000 5.470000 -Compute local part of mesh dual graph | 2 0.040000 0.080000 +Compute entities of dim = 2 | 1 0.220000 0.220000 +Compute graph partition (SCOTCH) | 1 5.860000 5.860000 +Compute local part of mesh dual graph | 2 0.080000 0.160000 Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.010000 0.010000 -Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute AdjacencyList nodes to destination ranks | 1 0.020000 0.020000 +Compute non-local part of mesh dual graph | 1 0.070000 0.070000 +Compute-local-to-global links for global/local adjacency list | 1 0.010000 0.010000 +Distribute AdjacencyList nodes to destination ranks | 1 0.100000 0.100000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.000000 0.000000 +GPS: create_level_structure | 4 0.003333 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.050000 0.050000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.010000 0.020000 +Init MPI | 1 0.140000 0.140000 +Init PETSc | 1 0.020000 0.020000 +Init dofmap from element dofmap | 2 0.015000 0.030000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 1.490000 1.490000 +PETSc Krylov solver | 1 2.400000 2.400000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 5.470000 5.470000 -SparsityPattern::finalize | 1 0.010000 0.010000 -Topology: create | 1 0.030000 0.030000 -Topology: determine shared index ownership | 1 0.010000 0.010000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble matrix | 1 0.370000 0.370000 +SCOTCH: call SCOTCH_dgraphPart | 1 5.860000 5.860000 +SparsityPattern::finalize | 1 0.020000 0.020000 +Topology: create | 1 0.120000 0.120000 +Topology: determine shared index ownership | 1 0.080000 0.080000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.020000 0.020000 +ZZZ Assemble matrix | 1 0.510000 0.510000 ZZZ Assemble vector | 1 0.020000 0.020000 -ZZZ Create Mesh | 1 5.630000 5.630000 -ZZZ Create RHS function | 1 0.020000 0.020000 -ZZZ Create boundary conditions | 1 0.000000 0.000000 -ZZZ Create facets and facet->cell connectivity | 1 0.120000 0.120000 +ZZZ Create Mesh | 1 6.300000 6.300000 +ZZZ Create RHS function | 1 0.040000 0.040000 +ZZZ Create boundary conditions | 1 0.010000 0.010000 +ZZZ Create facets and facet->cell connectivity | 1 0.240000 0.240000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.020000 0.020000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 1.490000 1.490000 +ZZZ FunctionSpace | 1 0.030000 0.030000 +ZZZ Solve | 1 2.410000 2.410000 *** Number of Krylov iterations: 18 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** @@ -3166,17 +3202,17 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt64a with 3 processes, by pbuilder1 on Wed Nov 6 01:49:18 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Thu Nov 7 03:57:55 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total -Time (sec): 7.712e+00 1.000 7.712e+00 +Time (sec): 9.613e+00 1.000 9.613e+00 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 2.190e+08 1.075 2.122e+08 6.366e+08 -Flops/sec: 2.840e+07 1.075 2.751e+07 8.254e+07 -MPI Msg Count: 7.940e+02 1.040 7.737e+02 2.321e+03 -MPI Msg Len (bytes): 8.244e+06 1.591 8.369e+03 1.942e+07 -MPI Reductions: 4.750e+02 1.000 +Flops: 2.109e+08 1.057 2.061e+08 6.182e+08 +Flops/sec: 2.194e+07 1.057 2.144e+07 6.431e+07 +MPI Msg Count: 7.940e+02 1.043 7.730e+02 2.319e+03 +MPI Msg Len (bytes): 7.012e+06 1.383 7.857e+03 1.822e+07 +MPI Reductions: 4.760e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops @@ -3184,7 +3220,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 7.7122e+00 100.0% 6.3657e+08 100.0% 2.321e+03 100.0% 8.369e+03 100.0% 4.570e+02 96.2% + 0: Main Stage: 9.6129e+00 100.0% 6.1820e+08 100.0% 2.319e+03 100.0% 7.857e+03 100.0% 4.580e+02 96.2% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -3208,80 +3244,80 @@ --- Event Stage 0: Main Stage -BuildTwoSided 111 1.0 1.1169e-01 4.9 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02 1 0 8 0 23 1 0 8 0 24 0 -BuildTwoSidedF 84 1.0 1.1136e-01 5.0 0.00e+00 0.0 1.1e+02 5.0e+04 8.4e+01 1 0 5 30 18 1 0 5 30 18 0 -MatMult 190 1.0 2.7303e-01 1.1 1.16e+08 1.1 1.1e+03 5.9e+03 0.0e+00 3 53 49 35 0 3 53 49 35 0 1227 -MatMultAdd 38 1.0 5.1812e-02 1.0 9.65e+06 1.1 1.5e+02 1.6e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 540 -MatMultTranspose 38 1.0 5.2639e-02 1.5 9.66e+06 1.1 1.5e+02 1.6e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 532 -MatSolve 19 0.0 2.6864e-03 0.0 1.81e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 675 -MatLUFactorSym 1 1.0 3.2627e-03 100.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatLUFactorNum 1 1.0 1.2696e-02 3778.6 6.19e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 487 -MatScale 6 1.0 2.5682e-03 1.1 6.11e+05 1.1 1.2e+01 1.7e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 692 -MatResidual 38 1.0 5.2512e-02 1.1 2.26e+07 1.1 2.3e+02 5.6e+03 0.0e+00 1 10 10 7 0 1 10 10 7 0 1234 -MatAssemblyBegin 47 1.0 1.4651e-01 2.4 0.00e+00 0.0 1.1e+02 5.0e+04 2.4e+01 1 0 5 30 5 1 0 5 30 5 0 -MatAssemblyEnd 47 1.0 1.1621e-01 1.1 1.23e+05 3.1 1.8e+02 5.0e+02 9.5e+01 1 0 8 0 20 1 0 8 0 21 2 -MatGetRowIJ 1 0.0 1.2951e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCreateSubMat 2 1.0 1.5420e-02 1.0 0.00e+00 0.0 1.4e+01 3.0e+04 3.0e+01 0 0 1 2 6 0 0 1 2 7 0 -MatGetOrdering 1 0.0 3.1673e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCoarsen 2 1.0 3.6354e-03 1.0 0.00e+00 0.0 1.1e+02 7.8e+02 3.6e+01 0 0 5 0 8 0 0 5 0 8 0 -MatZeroEntries 2 1.0 4.7040e-04 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 6 1.5 9.0036e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 -MatAXPY 4 1.0 2.7092e-02 1.0 1.18e+05 1.0 2.4e+01 4.2e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 13 -MatTranspose 9 1.0 1.5368e-02 1.1 0.00e+00 0.0 1.0e+02 2.0e+03 2.7e+01 0 0 5 1 6 0 0 5 1 6 0 -MatMatMultSym 6 1.0 1.0569e-01 1.1 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01 1 0 3 3 4 1 0 3 3 4 0 -MatMatMultNum 2 1.0 3.4353e-02 1.0 7.15e+06 1.1 1.2e+01 3.4e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 596 -MatPtAPSymbolic 2 1.0 2.9650e-01 1.0 0.00e+00 0.0 7.2e+01 5.1e+04 1.4e+01 4 0 3 19 3 4 0 3 19 3 0 -MatPtAPNumeric 2 1.0 4.6638e-01 1.0 6.46e+07 1.2 4.8e+01 6.5e+04 1.2e+01 6 28 2 16 3 6 28 2 16 3 385 -MatTrnMatMultSym 1 1.0 6.8014e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 -MatGetLocalMat 7 1.0 6.3930e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatGetBrAoCol 6 1.0 8.3859e-03 1.1 0.00e+00 0.0 8.4e+01 4.7e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 -VecMDot 20 1.0 6.2392e-03 1.9 1.22e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 575 -VecTDot 38 1.0 5.6954e-03 2.5 7.76e+05 1.0 0.0e+00 0.0e+00 3.8e+01 0 0 0 0 8 0 0 0 0 8 400 -VecNorm 41 1.0 1.3321e-02 3.5 6.32e+05 1.0 0.0e+00 0.0e+00 4.1e+01 0 0 0 0 9 0 0 0 0 9 139 -VecScale 22 1.0 1.8868e-04 1.0 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1902 -VecCopy 118 1.0 9.3244e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 134 1.0 7.9857e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 38 1.0 1.7677e-03 1.9 7.57e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1259 -VecAYPX 245 1.0 6.1060e-03 1.1 2.03e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 979 -VecAXPBYCZ 76 1.0 2.9247e-03 1.2 2.11e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2120 -VecMAXPY 22 1.0 1.8883e-03 1.0 1.44e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2246 -VecAssemblyBegin 61 1.0 2.4829e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 -VecAssemblyEnd 61 1.0 1.9224e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecPointwiseMult 174 1.0 4.6712e-03 1.2 9.64e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 608 -VecScatterBegin 330 1.0 9.2458e-03 1.3 0.00e+00 0.0 1.7e+03 4.7e+03 0.0e+00 0 0 74 41 0 0 0 74 41 0 0 -VecScatterEnd 330 1.0 2.7094e-02 4.0 1.25e+04 1.8 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1 -VecNormalize 22 1.0 1.2397e-03 1.1 3.66e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 868 -SFSetGraph 27 1.0 4.0470e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 27 1.0 2.6298e-03 1.0 0.00e+00 0.0 2.7e+02 4.9e+02 2.7e+01 0 0 11 1 6 0 0 11 1 6 0 -SFBcastBegin 8 1.0 3.3125e-04 1.0 0.00e+00 0.0 4.8e+01 1.4e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 -SFBcastEnd 8 1.0 8.7093e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFReduceBegin 3 1.0 1.0243e-04 1.2 0.00e+00 0.0 1.5e+01 6.7e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 -SFReduceEnd 3 1.0 4.8816e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFPack 341 1.0 2.7020e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 341 1.0 5.6338e-04 1.2 1.25e+04 1.8 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 55 -KSPSetUp 7 1.0 6.0843e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 3.8620e-01 1.0 1.30e+08 1.0 1.3e+03 5.0e+03 7.6e+01 5 61 57 34 16 5 61 57 34 17 998 -KSPGMRESOrthog 20 1.0 8.0180e-03 1.6 2.44e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 895 -PCSetUp_GAMG+ 1 1.0 1.1002e+00 1.0 8.74e+07 1.2 9.3e+02 1.3e+04 3.3e+02 14 39 40 60 69 14 39 40 60 72 223 - PCGAMGCreateG 2 1.0 7.7322e-02 1.0 1.54e+05 1.0 1.4e+02 1.7e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 6 - GAMG Coarsen 4 1.0 7.5876e-02 1.0 0.00e+00 0.0 1.8e+02 8.5e+03 5.3e+01 1 0 8 8 11 1 0 8 8 12 0 - GAMG MIS/Agg 2 1.0 7.1950e-02 1.0 0.00e+00 0.0 1.5e+02 9.2e+03 4.9e+01 1 0 7 7 10 1 0 7 7 11 0 - PCGAMGProl 2 1.0 2.8958e-02 1.0 0.00e+00 0.0 2.6e+02 3.3e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 - GAMG Prol-col 2 1.0 1.1795e-02 1.0 0.00e+00 0.0 2.2e+02 2.7e+03 5.6e+01 0 0 10 3 12 0 0 10 3 12 0 - GAMG Prol-lift 2 1.0 1.6330e-02 1.0 0.00e+00 0.0 3.6e+01 7.0e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 - PCGAMGOptProl 2 1.0 1.3764e-01 1.0 2.26e+07 1.1 1.9e+02 9.0e+03 6.6e+01 2 10 8 9 14 2 10 8 9 14 474 - GAMG smooth 2 1.0 9.7380e-02 1.0 7.70e+06 1.1 7.2e+01 1.5e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 227 - PCGAMGCreateL 2 1.0 7.7837e-01 1.0 6.46e+07 1.2 1.5e+02 4.9e+04 8.1e+01 10 28 6 37 17 10 28 6 37 18 230 - GAMG PtAP 2 1.0 7.6153e-01 1.0 6.46e+07 1.2 1.2e+02 5.7e+04 2.6e+01 10 28 5 35 5 10 28 5 35 6 236 - GAMG Reduce 1 1.0 1.6894e-02 1.0 0.00e+00 0.0 2.9e+01 1.6e+04 5.5e+01 0 0 1 2 12 0 0 1 2 12 0 -PCGAMG Squ l00 1 1.0 6.8019e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 -PCGAMG Gal l00 1 1.0 5.2397e-01 1.0 4.07e+07 1.1 6.0e+01 8.1e+04 1.3e+01 7 19 3 25 3 7 19 3 25 3 226 -PCGAMG Opt l00 1 1.0 5.9877e-02 1.0 5.11e+06 1.0 3.6e+01 2.2e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 251 -PCGAMG Gal l01 1 1.0 2.3756e-01 1.0 2.56e+07 1.8 6.0e+01 3.3e+04 1.3e+01 3 10 3 10 3 3 10 3 10 3 257 -PCGAMG Opt l01 1 1.0 1.9611e-02 1.0 2.21e+06 1.5 3.6e+01 7.0e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 278 -PCSetUp 2 1.0 1.1167e+00 1.0 8.74e+07 1.1 9.3e+02 1.3e+04 3.3e+02 14 39 40 60 69 14 39 40 60 72 225 -PCSetUpOnBlocks 19 1.0 1.6608e-02 50.4 6.19e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 373 -PCApply 19 1.0 3.4126e-01 1.0 1.13e+08 1.0 1.2e+03 4.6e+03 1.9e+01 4 53 52 29 4 4 53 52 29 4 980 +BuildTwoSided 111 1.0 3.1705e-01 2.0 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02 2 0 8 0 23 2 0 8 0 24 0 +BuildTwoSidedF 84 1.0 3.0407e-01 2.1 0.00e+00 0.0 1.1e+02 5.0e+04 8.4e+01 2 0 5 29 18 2 0 5 29 18 0 +MatMult 190 1.0 4.9092e-01 1.1 1.13e+08 1.1 1.1e+03 5.7e+03 0.0e+00 5 53 49 35 0 5 53 49 35 0 672 +MatMultAdd 38 1.0 7.3697e-02 1.2 9.17e+06 1.0 1.5e+02 1.5e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 371 +MatMultTranspose 38 1.0 1.2133e-01 1.2 9.18e+06 1.0 1.5e+02 1.5e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 226 +MatSolve 19 0.0 2.4145e-03 0.0 1.77e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 732 +MatLUFactorSym 1 1.0 3.1786e-03 88.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatLUFactorNum 1 1.0 9.9057e-03 2607.4 6.12e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 618 +MatScale 6 1.0 9.0742e-03 4.2 5.84e+05 1.0 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 192 +MatResidual 38 1.0 1.1056e-01 1.1 2.20e+07 1.1 2.3e+02 5.4e+03 0.0e+00 1 10 10 7 0 1 10 10 7 0 576 +MatAssemblyBegin 47 1.0 3.1567e-01 1.8 0.00e+00 0.0 1.1e+02 5.0e+04 2.4e+01 2 0 5 29 5 2 0 5 29 5 0 +MatAssemblyEnd 47 1.0 2.0026e-01 1.1 9.72e+04 2.2 1.8e+02 4.8e+02 9.5e+01 2 0 8 0 20 2 0 8 0 21 1 +MatGetRowIJ 1 0.0 1.2669e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCreateSubMat 2 1.0 2.4633e-02 1.0 0.00e+00 0.0 1.4e+01 2.6e+04 3.0e+01 0 0 1 2 6 0 0 1 2 7 0 +MatGetOrdering 1 0.0 3.0085e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCoarsen 2 1.0 1.1823e-02 1.0 0.00e+00 0.0 1.2e+02 8.4e+02 3.7e+01 0 0 5 1 8 0 0 5 1 8 0 +MatZeroEntries 2 1.0 3.3737e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 6 1.5 7.2917e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 +MatAXPY 4 1.0 9.1258e-02 1.1 1.17e+05 1.0 2.4e+01 4.0e+02 1.4e+01 1 0 1 0 3 1 0 1 0 3 4 +MatTranspose 9 1.0 3.1523e-02 1.0 0.00e+00 0.0 1.0e+02 1.8e+03 2.7e+01 0 0 5 1 6 0 0 5 1 6 0 +MatMatMultSym 6 1.0 1.7160e-01 1.2 0.00e+00 0.0 6.0e+01 1.0e+04 2.0e+01 2 0 3 3 4 2 0 3 3 4 0 +MatMatMultNum 2 1.0 5.5117e-02 1.2 6.94e+06 1.1 1.2e+01 3.2e+04 2.0e+00 1 3 1 2 0 1 3 1 2 0 365 +MatPtAPSymbolic 2 1.0 4.3516e-01 1.0 0.00e+00 0.0 7.2e+01 4.7e+04 1.4e+01 4 0 3 19 3 4 0 3 19 3 0 +MatPtAPNumeric 2 1.0 5.9432e-01 1.0 5.99e+07 1.1 4.8e+01 5.9e+04 1.2e+01 6 27 2 15 3 6 27 2 15 3 283 +MatTrnMatMultSym 1 1.0 1.1333e-01 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 +MatGetLocalMat 7 1.0 1.0581e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatGetBrAoCol 6 1.0 1.9817e-02 2.8 0.00e+00 0.0 8.4e+01 4.4e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 +VecMDot 20 1.0 5.0425e-02 3.1 1.22e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 71 +VecTDot 38 1.0 2.5605e-02 2.1 7.80e+05 1.0 0.0e+00 0.0e+00 3.8e+01 0 0 0 0 8 0 0 0 0 8 89 +VecNorm 41 1.0 3.6288e-02 1.4 6.34e+05 1.0 0.0e+00 0.0e+00 4.1e+01 0 0 0 0 9 0 0 0 0 9 51 +VecScale 22 1.0 1.9566e-04 1.1 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1830 +VecCopy 118 1.0 1.1009e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 134 1.0 6.5070e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 38 1.0 1.7510e-03 1.3 7.61e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1271 +VecAYPX 245 1.0 6.3423e-03 1.2 2.03e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 941 +VecAXPBYCZ 76 1.0 2.9953e-03 1.2 2.11e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2065 +VecMAXPY 22 1.0 2.6567e-03 1.4 1.44e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1593 +VecAssemblyBegin 61 1.0 2.5894e-02 11.2 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 +VecAssemblyEnd 61 1.0 2.2242e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecPointwiseMult 174 1.0 8.9747e-03 2.0 9.64e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 316 +VecScatterBegin 330 1.0 1.2564e-02 1.5 0.00e+00 0.0 1.7e+03 4.5e+03 0.0e+00 0 0 74 42 0 0 0 74 42 0 0 +VecScatterEnd 330 1.0 2.3872e-01 1.3 1.17e+04 1.7 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 +VecNormalize 22 1.0 5.4609e-03 2.8 3.66e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 197 +SFSetGraph 27 1.0 3.2767e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 27 1.0 1.9203e-02 1.0 0.00e+00 0.0 2.7e+02 4.7e+02 2.7e+01 0 0 11 1 6 0 0 11 1 6 0 +SFBcastBegin 9 1.0 2.9251e-04 1.0 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 +SFBcastEnd 9 1.0 1.5657e-04 2.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFReduceBegin 3 1.0 1.8740e-04 1.6 0.00e+00 0.0 1.5e+01 6.4e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 +SFReduceEnd 3 1.0 1.1119e-04 3.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFPack 342 1.0 2.8124e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 342 1.0 8.9157e-03 14.7 1.17e+04 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3 +KSPSetUp 7 1.0 4.6168e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 7.2435e-01 1.0 1.31e+08 1.1 1.3e+03 4.7e+03 7.6e+01 8 61 57 34 16 8 61 57 34 17 524 +KSPGMRESOrthog 20 1.0 5.2593e-02 2.9 2.44e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 136 +PCSetUp_GAMG+ 1 1.0 1.6741e+00 1.0 8.20e+07 1.1 9.4e+02 1.2e+04 3.3e+02 17 38 40 59 69 17 38 40 59 72 139 + PCGAMGCreateG 2 1.0 1.6682e-01 1.0 1.52e+05 1.0 1.4e+02 1.6e+03 5.0e+01 2 0 6 1 11 2 0 6 1 11 3 + GAMG Coarsen 4 1.0 1.2929e-01 1.0 0.00e+00 0.0 1.9e+02 7.9e+03 5.4e+01 1 0 8 8 11 1 0 8 8 12 0 + GAMG MIS/Agg 2 1.0 1.2554e-01 1.0 0.00e+00 0.0 1.6e+02 8.5e+03 5.0e+01 1 0 7 7 11 1 0 7 7 11 0 + PCGAMGProl 2 1.0 6.6326e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 7.6e+01 1 0 11 4 16 1 0 11 4 17 0 + GAMG Prol-col 2 1.0 3.5575e-02 1.3 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 10 3 12 0 0 10 3 12 0 + GAMG Prol-lift 2 1.0 3.4037e-02 1.1 0.00e+00 0.0 3.6e+01 6.6e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 + PCGAMGOptProl 2 1.0 2.6241e-01 1.0 2.20e+07 1.1 1.9e+02 8.6e+03 6.6e+01 3 10 8 9 14 3 10 8 9 14 245 + GAMG smooth 2 1.0 1.6752e-01 1.0 7.49e+06 1.1 7.2e+01 1.4e+04 2.4e+01 2 4 3 6 5 2 4 3 6 5 130 + PCGAMGCreateL 2 1.0 1.0502e+00 1.0 5.99e+07 1.1 1.5e+02 4.4e+04 8.1e+01 11 27 6 36 17 11 27 6 36 18 160 + GAMG PtAP 2 1.0 1.0161e+00 1.0 5.99e+07 1.1 1.2e+02 5.2e+04 2.6e+01 11 27 5 34 5 11 27 5 34 6 165 + GAMG Reduce 1 1.0 3.4185e-02 1.0 0.00e+00 0.0 2.9e+01 1.3e+04 5.5e+01 0 0 1 2 12 0 0 1 2 12 0 +PCGAMG Squ l00 1 1.0 1.1333e-01 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 +PCGAMG Gal l00 1 1.0 6.9436e-01 1.0 3.89e+07 1.0 6.0e+01 7.3e+04 1.3e+01 7 19 3 24 3 7 19 3 24 3 166 +PCGAMG Opt l00 1 1.0 1.0939e-01 1.0 5.09e+06 1.0 3.6e+01 2.1e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 137 +PCGAMG Gal l01 1 1.0 3.2171e-01 1.0 2.20e+07 1.6 6.0e+01 3.1e+04 1.3e+01 3 9 3 10 3 3 9 3 10 3 165 +PCGAMG Opt l01 1 1.0 3.5813e-02 1.1 1.97e+06 1.3 3.6e+01 6.5e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 142 +PCSetUp 2 1.0 1.6876e+00 1.0 8.20e+07 1.1 9.4e+02 1.2e+04 3.3e+02 17 39 40 59 69 17 39 40 59 72 142 +PCSetUpOnBlocks 19 1.0 1.3654e-02 39.3 6.12e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 448 +PCApply 19 1.0 6.3486e-01 1.0 1.14e+08 1.1 1.2e+03 4.4e+03 1.9e+01 7 53 52 29 4 7 53 52 29 4 517 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3304,9 +3340,9 @@ Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== -Average time to get PetscTime(): 1.76e-07 -Average time for MPI_Barrier(): 0.000105562 -Average time for zero size MPI_Send(): 4.75933e-06 +Average time to get PetscTime(): 1.6e-07 +Average time for MPI_Barrier(): 4.2956e-06 +Average time for zero size MPI_Send(): 4.04633e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) @@ -3369,66 +3405,66 @@ Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line -2024-11-06 01:49:18.064 ( 7.802s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2024-11-07 03:57:55.462 ( 9.761s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== elasticity strong scaling (3 processes with ndofs=30000) ==== -2024-11-06 01:49:18.237 ( 0.062s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-11-06 01:49:18.237 ( 0.062s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-11-06 01:49:18.237 ( 0.062s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:18.282 ( 0.107s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-11-06 01:49:18.283 ( 0.108s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:18.283 ( 0.108s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:18.283 ( 0.108s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-11-06 01:49:18.286 ( 0.111s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) -2024-11-06 01:49:18.286 ( 0.111s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-11-06 01:49:23.791 ( 5.616s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:23.791 ( 5.616s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:23.795 ( 5.620s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:23.838 ( 5.663s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(121) 585-16372 -2024-11-06 01:49:23.844 ( 5.669s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-11-06 01:49:23.844 ( 5.669s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-11-06 01:49:23.851 ( 5.676s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:23.851 ( 5.676s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:23.859 ( 5.684s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-11-06 01:49:23.859 ( 5.684s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-11-06 01:49:23.859 ( 5.684s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-11-06 01:49:23.862 ( 5.687s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:23.862 ( 5.687s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:23.870 ( 5.695s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.870 ( 5.695s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:23.870 ( 5.695s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.870 ( 5.695s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:23.874 ( 5.699s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:23.874 ( 5.699s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:23.874 ( 5.699s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-11-06 01:49:23.876 ( 5.701s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.876 ( 5.701s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:23.876 ( 5.701s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-11-06 01:49:23.876 ( 5.701s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:23.877 ( 5.702s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17582x4 -2024-11-06 01:49:23.885 ( 5.710s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:23.885 ( 5.710s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:23.886 ( 5.711s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:23.886 ( 5.711s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.886 ( 5.711s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:55.721 ( 0.125s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2024-11-07 03:57:55.721 ( 0.125s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2024-11-07 03:57:55.721 ( 0.125s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:57:55.818 ( 0.222s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2024-11-07 03:57:55.818 ( 0.222s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:57:55.818 ( 0.223s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:57:55.818 ( 0.223s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2024-11-07 03:57:55.825 ( 0.229s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) +2024-11-07 03:57:55.825 ( 0.229s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2024-11-07 03:58:01.042 ( 5.446s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:58:01.063 ( 5.467s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:58:01.149 ( 5.553s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:58:01.251 ( 5.655s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 16823-1324 +2024-11-07 03:58:01.264 ( 5.668s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2024-11-07 03:58:01.264 ( 5.668s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2024-11-07 03:58:01.271 ( 5.676s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:58:01.287 ( 5.691s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:58:01.335 ( 5.739s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2024-11-07 03:58:01.335 ( 5.740s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2024-11-07 03:58:01.335 ( 5.740s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2024-11-07 03:58:01.362 ( 5.766s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:58:01.367 ( 5.771s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:58:01.426 ( 5.830s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.439 ( 5.843s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:01.447 ( 5.852s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.463 ( 5.867s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:01.487 ( 5.892s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:58:01.488 ( 5.892s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:58:01.488 ( 5.892s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2024-11-07 03:58:01.496 ( 5.900s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.511 ( 5.915s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:01.511 ( 5.916s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2024-11-07 03:58:01.544 ( 5.948s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:58:01.544 ( 5.948s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17350x4 +2024-11-07 03:58:01.555 ( 5.959s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:58:01.555 ( 5.959s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:58:01.559 ( 5.963s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:58:01.593 ( 5.997s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.607 ( 6.011s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times -2024-11-06 01:49:23.889 ( 5.714s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-11-06 01:49:23.910 ( 5.735s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.910 ( 5.735s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:23.982 ( 5.807s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.983 ( 5.808s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:23.985 ( 5.810s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-11-06 01:49:23.985 ( 5.810s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-11-06 01:49:23.989 ( 5.814s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:23.989 ( 5.814s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17582x4 -2024-11-06 01:49:23.997 ( 5.822s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:23.997 ( 5.822s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:23.997 ( 5.822s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:23.998 ( 5.823s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:23.998 ( 5.823s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:23.999 ( 5.824s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:24.000 ( 5.825s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:24.000 ( 5.825s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-11-06 01:49:24.040 ( 5.865s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 213 to 576 +2024-11-07 03:58:01.631 ( 6.036s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2024-11-07 03:58:01.672 ( 6.076s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.695 ( 6.099s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:01.855 ( 6.260s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.871 ( 6.275s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:01.889 ( 6.293s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2024-11-07 03:58:01.889 ( 6.293s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2024-11-07 03:58:01.897 ( 6.301s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:58:01.897 ( 6.301s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17350x4 +2024-11-07 03:58:01.912 ( 6.316s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:58:01.912 ( 6.316s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:58:01.912 ( 6.316s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:58:01.943 ( 6.348s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:01.959 ( 6.363s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:02.000 ( 6.404s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:58:02.000 ( 6.405s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:58:02.000 ( 6.405s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2024-11-07 03:58:02.073 ( 6.477s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 214 to 565 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -3442,7 +3478,7 @@ Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- -2024-11-06 01:49:24.453 ( 6.278s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2024-11-07 03:58:02.736 ( 7.140s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3461,7 +3497,7 @@ Number of levels of aggressive coarsening 1 Square graph aggressive coarsening Number smoothing steps 1 - Complexity: grid = 1.0948 operator = 1.39247 + Complexity: grid = 1.0938 operator = 1.38168 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly @@ -3486,34 +3522,34 @@ tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd - factor fill ratio given 5., needed 1.13744 + factor fill ratio given 5., needed 1.14509 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=246, cols=246, bs=6 + rows=222, cols=222, bs=6 package used to perform factorization: petsc - total: nonzeros=57204, allocated nonzeros=57204 - using I-node routines: found 58 nodes, limit used is 5 + total: nonzeros=44892, allocated nonzeros=44892 + using I-node routines: found 57 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij - rows=246, cols=246, bs=6 - total: nonzeros=50292, allocated nonzeros=50292 + rows=222, cols=222, bs=6 + total: nonzeros=39204, allocated nonzeros=39204 total number of mallocs used during MatSetValues calls=0 - using I-node routines: found 82 nodes, limit used is 5 + using I-node routines: found 72 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=246, cols=246, bs=6 - total: nonzeros=50292, allocated nonzeros=50292 + rows=222, cols=222, bs=6 + total: nonzeros=39204, allocated nonzeros=39204 total number of mallocs used during MatSetValues calls=0 - using I-node (on process 0) routines: found 82 nodes, limit used is 5 + using I-node (on process 0) routines: found 72 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.293128, max 3.22441 - eigenvalues provided (min 0.0420095, max 2.93128) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.265333, max 2.91866 + eigenvalues provided (min 0.0679034, max 2.65333) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -3524,18 +3560,18 @@ linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij - rows=2598, cols=2598, bs=6 - total: nonzeros=440892, allocated nonzeros=440892 + rows=2592, cols=2592, bs=6 + total: nonzeros=438480, allocated nonzeros=438480 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation - using I-node (on process 0) routines: found 266 nodes, limit used is 5 + using I-node (on process 0) routines: found 257 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind - eigenvalue targets used: min 0.258695, max 2.84564 - eigenvalues provided (min 0.0688124, max 2.58695) with transform: [0. 0.1; 0. 1.1] + eigenvalue targets used: min 0.258233, max 2.84057 + eigenvalues provided (min 0.072119, max 2.58233) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning @@ -3550,7 +3586,7 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3448 nodes, limit used is 5 + using I-node (on process 0) routines: found 3412 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes @@ -3559,47 +3595,47 @@ total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space - using I-node (on process 0) routines: found 3448 nodes, limit used is 5 + using I-node (on process 0) routines: found 3412 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 5.660000 5.660000 -Build dofmap data | 2 0.005000 0.010000 -Build sparsity | 1 0.010000 0.010000 +Build BoxMesh (tetrahedra) | 1 5.930000 5.930000 +Build dofmap data | 2 0.080000 0.160000 +Build sparsity | 1 0.030000 0.030000 Compute connectivity 2-0 | 1 0.000000 0.000000 -Compute dof reordering map | 2 0.000000 0.000000 -Compute entities of dim = 2 | 1 0.090000 0.090000 -Compute graph partition (SCOTCH) | 1 5.510000 5.510000 -Compute local part of mesh dual graph | 2 0.045000 0.090000 +Compute dof reordering map | 2 0.005000 0.010000 +Compute entities of dim = 2 | 1 0.260000 0.260000 +Compute graph partition (SCOTCH) | 1 5.180000 5.180000 +Compute local part of mesh dual graph | 2 0.100000 0.200000 Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.010000 0.010000 -Compute-local-to-global links for global/local adjacency list | 1 0.010000 0.010000 -Distribute AdjacencyList nodes to destination ranks | 1 0.030000 0.030000 -Distribute row-wise data (scalable) | 1 0.000000 0.000000 -GPS: create_level_structure | 2 0.003333 0.010000 -Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 -Init MPI | 1 0.060000 0.060000 +Compute non-local part of mesh dual graph | 1 0.060000 0.060000 +Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 +Distribute AdjacencyList nodes to destination ranks | 1 0.140000 0.140000 +Distribute row-wise data (scalable) | 1 0.060000 0.060000 +GPS: create_level_structure | 4 0.005000 0.010000 +Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 +Init MPI | 1 0.110000 0.110000 Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.005000 0.010000 +Init dofmap from element dofmap | 2 0.015000 0.030000 Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 1.510000 1.510000 +PETSc Krylov solver | 1 4.270000 4.270000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 5.500000 5.500000 -SparsityPattern::finalize | 1 0.010000 0.010000 -Topology: create | 1 0.030000 0.030000 -Topology: determine shared index ownership | 1 0.010000 0.010000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble matrix | 1 0.370000 0.370000 -ZZZ Assemble vector | 1 0.020000 0.020000 -ZZZ Create Mesh | 1 5.660000 5.660000 -ZZZ Create RHS function | 1 0.020000 0.020000 -ZZZ Create boundary conditions | 1 0.010000 0.010000 -ZZZ Create facets and facet->cell connectivity | 1 0.090000 0.090000 +SCOTCH: call SCOTCH_dgraphPart | 1 5.180000 5.180000 +SparsityPattern::finalize | 1 0.030000 0.030000 +Topology: create | 1 0.270000 0.270000 +Topology: determine shared index ownership | 1 0.110000 0.110000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000000 0.000000 +ZZZ Assemble matrix | 1 0.520000 0.520000 +ZZZ Assemble vector | 1 0.060000 0.060000 +ZZZ Create Mesh | 1 5.930000 5.930000 +ZZZ Create RHS function | 1 0.040000 0.040000 +ZZZ Create boundary conditions | 1 0.030000 0.030000 +ZZZ Create facets and facet->cell connectivity | 1 0.260000 0.260000 ZZZ Create forms | 1 0.000000 0.000000 -ZZZ Create near-nullspace | 1 0.020000 0.020000 -ZZZ FunctionSpace | 1 0.010000 0.010000 -ZZZ Solve | 1 1.520000 1.520000 -*** Number of Krylov iterations: 19 +ZZZ Create near-nullspace | 1 0.050000 0.050000 +ZZZ FunctionSpace | 1 0.090000 0.090000 +ZZZ Solve | 1 4.280000 4.280000 +*** Number of Krylov iterations: 18 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** @@ -3607,17 +3643,17 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt64a with 3 processes, by pbuilder1 on Wed Nov 6 01:49:25 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Thu Nov 7 03:58:07 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total -Time (sec): 7.737e+00 1.000 7.737e+00 +Time (sec): 1.131e+01 1.000 1.131e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 2.281e+08 1.105 2.174e+08 6.523e+08 -Flops/sec: 2.948e+07 1.105 2.810e+07 8.431e+07 -MPI Msg Count: 8.190e+02 1.040 7.983e+02 2.395e+03 -MPI Msg Len (bytes): 7.610e+06 1.399 8.109e+03 1.942e+07 -MPI Reductions: 4.800e+02 1.000 +Flops: 2.157e+08 1.057 2.081e+08 6.243e+08 +Flops/sec: 1.907e+07 1.057 1.840e+07 5.521e+07 +MPI Msg Count: 7.980e+02 1.040 7.777e+02 2.333e+03 +MPI Msg Len (bytes): 7.646e+06 1.467 8.093e+03 1.888e+07 +MPI Reductions: 4.770e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops @@ -3625,7 +3661,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 7.7373e+00 100.0% 6.5235e+08 100.0% 2.395e+03 100.0% 8.109e+03 100.0% 4.620e+02 96.2% + 0: Main Stage: 1.1307e+01 100.0% 6.2430e+08 100.0% 2.333e+03 100.0% 8.093e+03 100.0% 4.590e+02 96.2% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -3649,80 +3685,80 @@ --- Event Stage 0: Main Stage -BuildTwoSided 111 1.0 1.0881e-01 10.7 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02 1 0 8 0 23 1 0 8 0 24 0 -BuildTwoSidedF 84 1.0 1.0850e-01 10.6 0.00e+00 0.0 1.1e+02 5.0e+04 8.4e+01 1 0 5 29 18 1 0 5 29 18 0 -MatMult 199 1.0 2.7938e-01 1.0 1.22e+08 1.1 1.2e+03 5.8e+03 0.0e+00 4 53 50 36 0 4 53 50 36 0 1248 -MatMultAdd 40 1.0 5.4030e-02 1.1 1.00e+07 1.1 1.6e+02 1.6e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 541 -MatMultTranspose 40 1.0 4.4258e-02 1.2 1.00e+07 1.1 1.6e+02 1.6e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 661 -MatSolve 20 0.0 2.8536e-03 0.0 2.28e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 800 -MatLUFactorSym 1 1.0 4.0774e-03 137.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatLUFactorNum 1 1.0 1.6746e-02 4477.4 8.56e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 511 -MatScale 6 1.0 2.4146e-03 1.1 6.02e+05 1.0 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 730 -MatResidual 40 1.0 5.3585e-02 1.0 2.40e+07 1.1 2.4e+02 5.5e+03 0.0e+00 1 10 10 7 0 1 10 10 7 0 1263 -MatAssemblyBegin 47 1.0 1.3659e-01 3.0 0.00e+00 0.0 1.1e+02 5.0e+04 2.4e+01 1 0 5 29 5 1 0 5 29 5 0 -MatAssemblyEnd 47 1.0 1.0608e-01 1.0 1.09e+05 2.6 1.8e+02 4.9e+02 9.5e+01 1 0 8 0 20 1 0 8 0 21 2 -MatGetRowIJ 1 0.0 1.4301e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCreateSubMat 2 1.0 1.7185e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 3.0e+01 0 0 1 3 6 0 0 1 3 6 0 -MatGetOrdering 1 0.0 3.3453e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatCoarsen 2 1.0 3.5046e-03 1.0 0.00e+00 0.0 1.2e+02 8.4e+02 3.7e+01 0 0 5 1 8 0 0 5 1 8 0 -MatZeroEntries 2 1.0 3.3345e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 6 1.5 6.2412e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 -MatAXPY 4 1.0 2.8682e-02 1.0 1.18e+05 1.0 2.4e+01 4.1e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 12 -MatTranspose 9 1.0 1.5458e-02 1.1 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 -MatMatMultSym 6 1.0 1.0788e-01 1.1 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01 1 0 3 3 4 1 0 3 3 4 0 -MatMatMultNum 2 1.0 3.4829e-02 1.0 7.19e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 583 -MatPtAPSymbolic 2 1.0 2.9896e-01 1.0 0.00e+00 0.0 7.2e+01 5.0e+04 1.4e+01 4 0 3 19 3 4 0 3 19 3 0 -MatPtAPNumeric 2 1.0 4.7562e-01 1.0 6.56e+07 1.2 4.8e+01 6.3e+04 1.2e+01 6 27 2 16 2 6 27 2 16 3 369 -MatTrnMatMultSym 1 1.0 6.2251e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 -MatGetLocalMat 7 1.0 6.6114e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatGetBrAoCol 6 1.0 8.0463e-03 1.1 0.00e+00 0.0 8.4e+01 4.6e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 -VecMDot 20 1.0 4.8038e-03 1.3 1.23e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 746 -VecTDot 40 1.0 4.7242e-03 1.8 8.27e+05 1.1 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 8 0 0 0 0 9 508 -VecNorm 42 1.0 8.4907e-03 5.6 6.59e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 226 -VecScale 22 1.0 1.8560e-04 1.0 1.23e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1932 -VecCopy 124 1.0 1.3435e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 141 1.0 7.4885e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 40 1.0 1.5394e-03 1.4 8.08e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1523 -VecAYPX 258 1.0 6.5028e-03 1.3 2.16e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 968 -VecAXPBYCZ 80 1.0 3.6448e-03 1.3 2.23e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1789 -VecMAXPY 22 1.0 1.9727e-03 1.1 1.45e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2148 -VecAssemblyBegin 61 1.0 2.2807e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 12 0 0 0 0 13 0 -VecAssemblyEnd 61 1.0 1.8528e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecPointwiseMult 182 1.0 5.2715e-03 1.2 1.01e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 563 -VecScatterBegin 343 1.0 9.1623e-03 1.2 0.00e+00 0.0 1.8e+03 4.6e+03 0.0e+00 0 0 74 42 0 0 0 74 42 0 0 -VecScatterEnd 343 1.0 1.5870e-02 1.4 1.26e+04 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2 -VecNormalize 22 1.0 1.1679e-03 1.1 3.68e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 921 -SFSetGraph 27 1.0 3.3139e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 27 1.0 2.4398e-03 1.0 0.00e+00 0.0 2.7e+02 4.8e+02 2.7e+01 0 0 11 1 6 0 0 11 1 6 0 -SFBcastBegin 9 1.0 2.9307e-04 1.0 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 -SFBcastEnd 9 1.0 1.1321e-04 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFReduceBegin 3 1.0 1.0051e-04 1.1 0.00e+00 0.0 1.5e+01 6.5e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 -SFReduceEnd 3 1.0 3.1258e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFPack 355 1.0 2.7079e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 355 1.0 5.0281e-04 1.2 1.26e+04 1.7 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 63 -KSPSetUp 7 1.0 5.6737e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 4.0256e-01 1.0 1.41e+08 1.1 1.4e+03 4.9e+03 8.0e+01 5 62 58 35 17 5 62 58 35 17 1008 -KSPGMRESOrthog 20 1.0 6.5617e-03 1.2 2.45e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 1093 -PCSetUp_GAMG+ 1 1.0 1.1093e+00 1.0 8.85e+07 1.2 9.4e+02 1.2e+04 3.3e+02 14 37 39 59 69 14 37 39 59 71 217 - PCGAMGCreateG 2 1.0 7.8966e-02 1.0 1.54e+05 1.0 1.4e+02 1.6e+03 5.0e+01 1 0 6 1 10 1 0 6 1 11 6 - GAMG Coarsen 4 1.0 7.0189e-02 1.0 0.00e+00 0.0 1.9e+02 8.1e+03 5.4e+01 1 0 8 8 11 1 0 8 8 12 0 - GAMG MIS/Agg 2 1.0 6.6047e-02 1.0 0.00e+00 0.0 1.6e+02 8.7e+03 5.0e+01 1 0 7 7 10 1 0 7 7 11 0 - PCGAMGProl 2 1.0 2.9933e-02 1.0 0.00e+00 0.0 2.6e+02 3.2e+03 7.6e+01 0 0 11 4 16 0 0 11 4 16 0 - GAMG Prol-col 2 1.0 1.1537e-02 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 9 3 12 0 0 9 3 12 0 - GAMG Prol-lift 2 1.0 1.7575e-02 1.0 0.00e+00 0.0 3.6e+01 7.2e+03 1.2e+01 0 0 2 1 2 0 0 2 1 3 0 - PCGAMGOptProl 2 1.0 1.3816e-01 1.0 2.27e+07 1.1 1.9e+02 8.8e+03 6.6e+01 2 10 8 9 14 2 10 8 9 14 469 - GAMG smooth 2 1.0 9.8254e-02 1.0 7.75e+06 1.1 7.2e+01 1.4e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 224 - PCGAMGCreateL 2 1.0 7.9019e-01 1.0 6.56e+07 1.2 1.5e+02 4.8e+04 8.1e+01 10 27 6 37 17 10 27 6 37 18 222 - GAMG PtAP 2 1.0 7.7146e-01 1.0 6.56e+07 1.2 1.2e+02 5.5e+04 2.6e+01 10 27 5 34 5 10 27 5 34 6 227 - GAMG Reduce 1 1.0 1.8905e-02 1.0 0.00e+00 0.0 2.9e+01 1.8e+04 5.5e+01 0 0 1 3 11 0 0 1 3 12 0 -PCGAMG Squ l00 1 1.0 6.2255e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 -PCGAMG Gal l00 1 1.0 5.2480e-01 1.0 3.98e+07 1.0 6.0e+01 7.6e+04 1.3e+01 7 18 3 23 3 7 18 3 23 3 223 -PCGAMG Opt l00 1 1.0 6.0774e-02 1.0 5.12e+06 1.0 3.6e+01 2.2e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 247 -PCGAMG Gal l01 1 1.0 2.4671e-01 1.0 2.59e+07 1.8 6.0e+01 3.5e+04 1.3e+01 3 9 3 11 3 3 9 3 11 3 236 -PCGAMG Opt l01 1 1.0 1.8911e-02 1.0 2.22e+06 1.5 3.6e+01 7.0e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 280 -PCSetUp 2 1.0 1.1306e+00 1.0 8.85e+07 1.1 9.4e+02 1.2e+04 3.3e+02 14 38 39 59 69 14 38 39 59 71 220 -PCSetUpOnBlocks 20 1.0 2.1426e-02 63.0 8.56e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 400 -PCApply 20 1.0 3.5821e-01 1.0 1.22e+08 1.1 1.3e+03 4.5e+03 2.0e+01 5 54 53 30 4 5 54 53 30 4 982 +BuildTwoSided 111 1.0 5.1926e-01 1.2 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02 4 0 8 0 23 4 0 8 0 24 0 +BuildTwoSidedF 84 1.0 4.5646e-01 1.3 0.00e+00 0.0 1.1e+02 4.9e+04 8.4e+01 3 0 5 29 18 3 0 5 29 18 0 +MatMult 190 1.0 7.1023e-01 1.1 1.15e+08 1.1 1.1e+03 5.8e+03 0.0e+00 6 53 49 35 0 6 53 49 35 0 468 +MatMultAdd 38 1.0 1.3235e-01 1.3 9.47e+06 1.0 1.5e+02 1.5e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 209 +MatMultTranspose 38 1.0 1.7722e-01 1.8 9.48e+06 1.0 1.5e+02 1.5e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 156 +MatSolve 19 0.0 2.3069e-03 0.0 1.70e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 738 +MatLUFactorSym 1 1.0 3.0934e-03 98.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatLUFactorNum 1 1.0 3.2275e-02 8361.4 5.79e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 179 +MatScale 6 1.0 1.0095e-02 4.8 6.00e+05 1.0 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 174 +MatResidual 38 1.0 1.4661e-01 1.2 2.25e+07 1.1 2.3e+02 5.6e+03 0.0e+00 1 10 10 7 0 1 10 10 7 0 438 +MatAssemblyBegin 47 1.0 3.7863e-01 1.3 0.00e+00 0.0 1.1e+02 4.9e+04 2.4e+01 3 0 5 29 5 3 0 5 29 5 0 +MatAssemblyEnd 47 1.0 3.7058e-01 1.0 8.57e+04 2.0 1.8e+02 4.9e+02 9.5e+01 3 0 8 0 20 3 0 8 0 21 1 +MatGetRowIJ 1 0.0 1.4201e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCreateSubMat 2 1.0 2.2420e-01 1.0 0.00e+00 0.0 1.4e+01 2.7e+04 3.0e+01 2 0 1 2 6 2 0 1 2 7 0 +MatGetOrdering 1 0.0 3.4903e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatCoarsen 2 1.0 1.1793e-01 1.0 0.00e+00 0.0 1.2e+02 8.3e+02 3.8e+01 1 0 5 1 8 1 0 5 1 8 0 +MatZeroEntries 2 1.0 3.0175e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 6 1.5 7.1265e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 +MatAXPY 4 1.0 6.9724e-02 1.1 1.17e+05 1.0 2.4e+01 4.1e+02 1.4e+01 1 0 1 0 3 1 0 1 0 3 5 +MatTranspose 9 1.0 5.4799e-02 1.3 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01 0 0 5 1 6 0 0 5 1 6 0 +MatMatMultSym 6 1.0 3.4014e-01 1.1 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01 3 0 3 3 4 3 0 3 3 4 0 +MatMatMultNum 2 1.0 5.4624e-02 1.0 7.09e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 371 +MatPtAPSymbolic 2 1.0 6.4719e-01 1.0 0.00e+00 0.0 7.2e+01 4.9e+04 1.4e+01 6 0 3 19 3 6 0 3 19 3 0 +MatPtAPNumeric 2 1.0 7.5865e-01 1.0 6.16e+07 1.2 4.8e+01 6.1e+04 1.2e+01 7 27 2 15 3 7 27 2 15 3 226 +MatTrnMatMultSym 1 1.0 2.4078e-01 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 2 0 2 7 3 2 0 2 7 3 0 +MatGetLocalMat 7 1.0 1.4459e-02 2.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatGetBrAoCol 6 1.0 5.6460e-02 1.2 0.00e+00 0.0 8.4e+01 4.6e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 +VecMDot 20 1.0 6.5396e-02 1.2 1.21e+06 1.0 0.0e+00 0.0e+00 2.0e+01 1 1 0 0 4 1 1 0 0 4 55 +VecTDot 38 1.0 1.7840e-01 1.8 7.78e+05 1.0 0.0e+00 0.0e+00 3.8e+01 1 0 0 0 8 1 0 0 0 8 13 +VecNorm 41 1.0 1.5040e-01 1.4 6.31e+05 1.0 0.0e+00 0.0e+00 4.1e+01 1 0 0 0 9 1 0 0 0 9 12 +VecScale 22 1.0 1.9438e-04 1.1 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1844 +VecCopy 118 1.0 1.0750e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 134 1.0 8.7420e-03 12.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 38 1.0 1.3786e-03 1.1 7.59e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1614 +VecAYPX 245 1.0 5.8151e-03 1.1 2.02e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1027 +VecAXPBYCZ 76 1.0 3.3452e-03 1.3 2.09e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1851 +VecMAXPY 22 1.0 2.0020e-03 1.0 1.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2116 +VecAssemblyBegin 61 1.0 1.1148e-01 1.9 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 1 0 0 0 13 1 0 0 0 13 0 +VecAssemblyEnd 61 1.0 2.2918e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecPointwiseMult 174 1.0 5.0279e-03 1.2 9.58e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 564 +VecScatterBegin 330 1.0 1.8204e-02 1.8 0.00e+00 0.0 1.7e+03 4.6e+03 0.0e+00 0 0 73 42 0 0 0 73 42 0 0 +VecScatterEnd 330 1.0 6.4438e-01 1.4 1.12e+04 1.3 0.0e+00 0.0e+00 0.0e+00 5 0 0 0 0 5 0 0 0 0 0 +VecNormalize 22 1.0 6.0539e-02 13.3 3.63e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 18 +SFSetGraph 27 1.0 3.7110e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 27 1.0 1.0945e-01 1.0 0.00e+00 0.0 2.7e+02 4.8e+02 2.7e+01 1 0 11 1 6 1 0 11 1 6 0 +SFBcastBegin 10 1.0 3.4233e-04 1.6 0.00e+00 0.0 6.0e+01 1.4e+03 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 +SFBcastEnd 10 1.0 6.3470e-02 4.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFReduceBegin 3 1.0 9.1492e-05 1.2 0.00e+00 0.0 1.5e+01 6.6e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 +SFReduceEnd 3 1.0 4.0696e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFPack 343 1.0 2.7471e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 343 1.0 7.7714e-04 1.2 1.12e+04 1.3 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 38 +KSPSetUp 7 1.0 4.9305e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 1.2428e+00 1.0 1.29e+08 1.0 1.3e+03 4.9e+03 7.6e+01 11 61 57 34 16 11 61 57 34 17 307 +KSPGMRESOrthog 20 1.0 6.7286e-02 1.2 2.42e+06 1.0 0.0e+00 0.0e+00 2.0e+01 1 1 0 0 4 1 1 0 0 4 107 +PCSetUp_GAMG+ 1 1.0 3.0287e+00 1.0 8.42e+07 1.2 9.4e+02 1.2e+04 3.3e+02 27 38 40 59 69 27 38 40 59 72 78 + PCGAMGCreateG 2 1.0 1.7163e-01 1.0 1.53e+05 1.0 1.4e+02 1.7e+03 5.0e+01 2 0 6 1 10 2 0 6 1 11 3 + GAMG Coarsen 4 1.0 4.4880e-01 1.0 0.00e+00 0.0 2.0e+02 8.0e+03 5.5e+01 4 0 8 8 12 4 0 8 8 12 0 + GAMG MIS/Agg 2 1.0 3.5904e-01 1.0 0.00e+00 0.0 1.6e+02 8.6e+03 5.1e+01 3 0 7 7 11 3 0 7 7 11 0 + PCGAMGProl 2 1.0 1.3421e-01 1.1 0.00e+00 0.0 2.6e+02 3.3e+03 7.6e+01 1 0 11 5 16 1 0 11 5 17 0 + GAMG Prol-col 2 1.0 6.8547e-02 1.1 0.00e+00 0.0 2.2e+02 2.7e+03 5.6e+01 1 0 10 3 12 1 0 10 3 12 0 + GAMG Prol-lift 2 1.0 3.0446e-02 1.0 0.00e+00 0.0 3.6e+01 7.2e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 + PCGAMGOptProl 2 1.0 4.8946e-01 1.0 2.25e+07 1.1 1.9e+02 8.9e+03 6.6e+01 4 10 8 9 14 4 10 8 9 14 132 + GAMG smooth 2 1.0 3.3373e-01 1.0 7.66e+06 1.1 7.2e+01 1.4e+04 2.4e+01 3 4 3 6 5 3 4 3 6 5 66 + PCGAMGCreateL 2 1.0 1.7785e+00 1.0 6.16e+07 1.2 1.5e+02 4.6e+04 8.1e+01 16 27 6 36 17 16 27 6 36 18 96 + GAMG PtAP 2 1.0 1.3868e+00 1.0 6.16e+07 1.2 1.2e+02 5.4e+04 2.6e+01 12 27 5 34 5 12 27 5 34 6 123 + GAMG Reduce 1 1.0 3.9184e-01 1.0 0.00e+00 0.0 2.9e+01 1.4e+04 5.5e+01 3 0 1 2 12 3 0 1 2 12 0 +PCGAMG Squ l00 1 1.0 2.4079e-01 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 2 0 2 7 3 2 0 2 7 3 0 +PCGAMG Gal l00 1 1.0 8.4749e-01 1.0 3.92e+07 1.0 6.0e+01 7.7e+04 1.3e+01 7 19 3 25 3 7 19 3 25 3 138 +PCGAMG Opt l00 1 1.0 1.5819e-01 1.0 5.06e+06 1.0 3.6e+01 2.2e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 95 +PCGAMG Gal l01 1 1.0 5.4320e-01 1.0 2.23e+07 1.7 6.0e+01 3.0e+04 1.3e+01 5 9 3 10 3 5 9 3 10 3 100 +PCGAMG Opt l01 1 1.0 1.3567e-01 1.1 2.12e+06 1.5 3.6e+01 6.7e+03 1.1e+01 1 1 2 1 2 1 1 2 1 2 39 +PCSetUp 2 1.0 3.0648e+00 1.0 8.42e+07 1.1 9.4e+02 1.2e+04 3.3e+02 27 39 40 59 69 27 39 40 59 72 79 +PCSetUpOnBlocks 19 1.0 3.6059e-02 107.1 5.79e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 161 +PCApply 19 1.0 9.6138e-01 1.0 1.13e+08 1.1 1.2e+03 4.6e+03 1.9e+01 8 53 52 29 4 8 53 52 29 4 344 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -3745,9 +3781,9 @@ Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== -Average time to get PetscTime(): 1.6e-07 -Average time for MPI_Barrier(): 4.1596e-06 -Average time for zero size MPI_Send(): 4.03967e-06 +Average time to get PetscTime(): 1.4e-07 +Average time for MPI_Barrier(): 4.2836e-06 +Average time for zero size MPI_Send(): 4.35967e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) @@ -3810,68 +3846,68 @@ Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line -2024-11-06 01:49:25.998 ( 7.823s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2024-11-07 03:58:07.104 ( 11.508s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson weak scaling (3 processes with ndofs=10000) ==== -2024-11-06 01:49:26.165 ( 0.061s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-11-06 01:49:26.165 ( 0.061s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-11-06 01:49:26.165 ( 0.061s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:26.313 ( 0.209s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-11-06 01:49:26.313 ( 0.209s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:26.314 ( 0.209s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:26.314 ( 0.209s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-11-06 01:49:26.320 ( 0.216s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) -2024-11-06 01:49:26.320 ( 0.216s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-11-06 01:49:35.436 ( 9.331s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:35.436 ( 9.332s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:35.447 ( 9.343s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:35.584 ( 9.480s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(175) 51495-1934 -2024-11-06 01:49:35.605 ( 9.501s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-11-06 01:49:35.605 ( 9.501s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-11-06 01:49:35.639 ( 9.535s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:35.640 ( 9.535s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:35.667 ( 9.563s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-11-06 01:49:35.667 ( 9.563s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-11-06 01:49:35.667 ( 9.563s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-11-06 01:49:35.675 ( 9.571s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:35.676 ( 9.572s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:35.702 ( 9.598s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:35.705 ( 9.600s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:35.705 ( 9.601s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:35.705 ( 9.601s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:35.718 ( 9.614s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:35.718 ( 9.614s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:35.718 ( 9.614s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-11-06 01:49:35.720 ( 9.615s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:35.720 ( 9.616s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:35.720 ( 9.616s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-11-06 01:49:35.722 ( 9.617s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:35.722 ( 9.618s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53189x4 -2024-11-06 01:49:35.746 ( 9.642s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:35.746 ( 9.642s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:35.748 ( 9.644s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:35.749 ( 9.645s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:35.750 ( 9.645s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:07.436 ( 0.194s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2024-11-07 03:58:07.436 ( 0.194s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2024-11-07 03:58:07.436 ( 0.194s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:58:07.816 ( 0.574s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2024-11-07 03:58:07.820 ( 0.578s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:07.820 ( 0.578s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:07.820 ( 0.578s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2024-11-07 03:58:07.828 ( 0.585s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) +2024-11-07 03:58:07.828 ( 0.585s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2024-11-07 03:58:17.269 ( 10.026s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:58:17.291 ( 10.049s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:58:17.372 ( 10.129s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:58:17.612 ( 10.370s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(163) 1449-51120 +2024-11-07 03:58:17.630 ( 10.388s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2024-11-07 03:58:17.630 ( 10.388s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2024-11-07 03:58:17.832 ( 10.589s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:58:17.847 ( 10.605s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:58:17.935 ( 10.693s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2024-11-07 03:58:17.935 ( 10.693s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2024-11-07 03:58:17.943 ( 10.701s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2024-11-07 03:58:17.976 ( 10.734s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:58:17.983 ( 10.741s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:58:18.088 ( 10.846s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.103 ( 10.861s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:18.111 ( 10.869s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.127 ( 10.885s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:18.168 ( 10.926s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:58:18.175 ( 10.933s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:58:18.175 ( 10.933s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2024-11-07 03:58:18.185 ( 10.942s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.199 ( 10.957s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:18.199 ( 10.957s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2024-11-07 03:58:18.235 ( 10.993s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:58:18.235 ( 10.993s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53200x4 +2024-11-07 03:58:18.268 ( 11.025s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:58:18.268 ( 11.026s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:58:18.269 ( 11.027s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:58:18.270 ( 11.028s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.270 ( 11.028s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times -2024-11-06 01:49:35.758 ( 9.654s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-11-06 01:49:35.823 ( 9.719s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:35.830 ( 9.725s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:35.972 ( 9.868s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:35.972 ( 9.868s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:35.980 ( 9.876s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-11-06 01:49:35.980 ( 9.876s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-11-06 01:49:35.988 ( 9.884s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:35.988 ( 9.884s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53189x4 -2024-11-06 01:49:36.013 ( 9.908s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:36.013 ( 9.909s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:36.014 ( 9.910s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:36.016 ( 9.912s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:36.016 ( 9.912s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:36.018 ( 9.914s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:36.020 ( 9.916s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:36.020 ( 9.916s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-11-06 01:49:36.105 ( 10.000s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-11-06 01:49:36.105 ( 10.001s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) -2024-11-06 01:49:36.164 ( 10.060s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 464 to 1241 +2024-11-07 03:58:18.278 ( 11.036s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2024-11-07 03:58:18.430 ( 11.188s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.440 ( 11.197s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:18.741 ( 11.498s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.741 ( 11.498s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:18.749 ( 11.507s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2024-11-07 03:58:18.749 ( 11.507s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2024-11-07 03:58:18.755 ( 11.513s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:58:18.756 ( 11.514s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53200x4 +2024-11-07 03:58:18.778 ( 11.536s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:58:18.779 ( 11.536s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:58:18.780 ( 11.538s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:58:18.823 ( 11.581s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:18.828 ( 11.586s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:18.829 ( 11.587s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:58:18.831 ( 11.589s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:58:18.831 ( 11.589s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2024-11-07 03:58:18.915 ( 11.672s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2024-11-07 03:58:18.915 ( 11.672s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) +2024-11-07 03:58:18.998 ( 11.756s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 466 to 1286 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -3885,7 +3921,7 @@ Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- -2024-11-06 01:49:36.378 ( 10.274s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2024-11-07 03:58:19.364 ( 12.121s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -3929,43 +3965,43 @@ total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines -[MPI_MAX] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 9.600000 9.600000 -Build dofmap data | 2 0.030000 0.060000 -Build sparsity | 1 0.020000 0.020000 -Compute connectivity 2-0 | 1 0.010000 0.010000 -Compute dof reordering map | 2 0.005000 0.010000 -Compute entities of dim = 2 | 1 0.230000 0.230000 -Compute graph partition (SCOTCH) | 1 9.110000 9.110000 -Compute local part of mesh dual graph | 2 0.145000 0.290000 -Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.020000 0.020000 -Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 -Distribute AdjacencyList nodes to destination ranks | 1 0.040000 0.040000 -Distribute row-wise data (scalable) | 1 0.010000 0.010000 -GPS: create_level_structure | 4 0.003333 0.010000 -Gibbs-Poole-Stockmeyer ordering | 1 0.030000 0.030000 -Init MPI | 1 0.050000 0.050000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.025000 0.050000 -Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 0.790000 0.790000 -SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 9.110000 9.110000 -SparsityPattern::finalize | 1 0.040000 0.040000 -Topology: create | 1 0.100000 0.100000 -Topology: determine shared index ownership | 1 0.030000 0.030000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 -ZZZ Assemble | 1 0.360000 0.360000 -ZZZ Assemble matrix | 1 0.160000 0.160000 -ZZZ Assemble vector | 1 0.030000 0.030000 -ZZZ Create Mesh | 1 9.600000 9.600000 -ZZZ Create RHS function | 1 0.080000 0.080000 -ZZZ Create boundary conditions | 1 0.010000 0.010000 -ZZZ Create facets and facet->cell connectivity | 1 0.240000 0.240000 -ZZZ FunctionSpace | 1 0.030000 0.030000 -ZZZ Solve | 1 0.790000 0.790000 +[MPI_MAX] Summary of timings | reps wall avg wall tot +--------------------------------------------------------------------------------------------------------- +Build BoxMesh (tetrahedra) | 1 10.870000 10.870000 +Build dofmap data | 2 0.060000 0.120000 +Build sparsity | 1 0.040000 0.040000 +Compute connectivity 2-0 | 1 0.010000 0.010000 +Compute dof reordering map | 2 0.000000 0.000000 +Compute entities of dim = 2 | 1 0.480000 0.480000 +Compute graph partition (SCOTCH) | 1 9.390000 9.390000 +Compute local part of mesh dual graph | 2 0.310000 0.620000 +Compute local-to-local map | 1 0.010000 0.010000 +Compute non-local part of mesh dual graph | 1 0.200000 0.200000 +Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 +Distribute AdjacencyList nodes to destination ranks | 1 0.170000 0.170000 +Distribute row-wise data (scalable) | 1 0.060000 0.060000 +GPS: create_level_structure | 5 0.010000 0.020000 +Gibbs-Poole-Stockmeyer ordering | 1 0.060000 0.060000 +Init MPI | 1 0.160000 0.160000 +Init PETSc | 1 0.000000 0.000000 +Init dofmap from element dofmap | 2 0.035000 0.070000 +Init logging | 1 0.000000 0.000000 +PETSc Krylov solver | 1 3.540000 3.540000 +SCOTCH: call SCOTCH_dgraphBuild | 1 0.010000 0.010000 +SCOTCH: call SCOTCH_dgraphPart | 1 9.380000 9.380000 +SparsityPattern::finalize | 1 0.050000 0.050000 +Topology: create | 1 0.560000 0.560000 +Topology: determine shared index ownership | 1 0.280000 0.280000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.020000 0.020000 +ZZZ Assemble | 1 0.530000 0.530000 +ZZZ Assemble matrix | 1 0.260000 0.260000 +ZZZ Assemble vector | 1 0.070000 0.070000 +ZZZ Create Mesh | 1 10.880000 10.880000 +ZZZ Create RHS function | 1 0.090000 0.090000 +ZZZ Create boundary conditions | 1 0.010000 0.010000 +ZZZ Create facets and facet->cell connectivity | 1 0.490000 0.490000 +ZZZ FunctionSpace | 1 0.080000 0.080000 +ZZZ Solve | 1 3.550000 3.550000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** @@ -3974,16 +4010,16 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt64a with 3 processes, by pbuilder1 on Wed Nov 6 01:49:37 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Thu Nov 7 03:58:22 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total -Time (sec): 1.101e+01 1.000 1.101e+01 +Time (sec): 1.551e+01 1.000 1.551e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 3.519e+06 1.020 3.489e+06 1.047e+07 -Flops/sec: 3.196e+05 1.020 3.168e+05 9.505e+05 +Flops: 3.558e+06 1.032 3.489e+06 1.047e+07 +Flops/sec: 2.293e+05 1.031 2.249e+05 6.748e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 -MPI Msg Len (bytes): 1.939e+05 1.248 5.950e+03 5.355e+05 +MPI Msg Len (bytes): 1.842e+05 1.152 5.858e+03 5.272e+05 MPI Reductions: 7.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) @@ -3992,7 +4028,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.1011e+01 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.950e+03 100.0% 5.400e+01 75.0% + 0: Main Stage: 1.5511e+01 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.858e+03 100.0% 5.400e+01 75.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -4016,32 +4052,32 @@ --- Event Stage 0: Main Stage -BuildTwoSided 5 1.0 4.8855e-03 20.5 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 -BuildTwoSidedF 2 1.0 4.8554e-03 18.8 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatMult 7 1.0 7.9884e-03 1.2 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 717 -MatConvert 1 1.0 1.2224e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 -MatAssemblyBegin 5 1.0 7.9674e-03 2.1 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatAssemblyEnd 5 1.0 9.1290e-03 1.1 3.98e+03 1.3 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 1 -MatGetRowIJ 4 1.0 9.6580e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 1 1.0 2.9429e-04 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 -MatSetPreallCOO 2 1.0 3.7026e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatSetValuesCOO 2 1.0 2.7341e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecTDot 16 1.0 1.8859e-03 2.4 3.20e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 505 -VecNorm 8 1.0 1.8586e-03 5.2 1.60e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 256 -VecCopy 2 1.0 5.2896e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 9 1.0 1.4387e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 14 1.0 5.1035e-04 1.2 2.80e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1634 -VecAYPX 6 1.0 2.6459e-04 1.3 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1351 -VecScatterBegin 7 1.0 2.7707e-04 1.1 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 -VecScatterEnd 7 1.0 2.1878e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetGraph 3 1.0 8.2552e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 3 1.0 3.8510e-04 1.1 0.00e+00 0.0 3.6e+01 8.3e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 -SFPack 7 1.0 9.2791e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 7 1.0 1.0600e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSetUp 1 1.0 1.1755e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 3.7941e-01 1.0 2.81e+06 1.0 4.2e+01 5.7e+03 2.4e+01 3 80 47 45 33 3 80 47 45 44 22 -PCSetUp 1 1.0 4.0673e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 4 0 0 0 3 4 0 0 0 4 0 -PCApply 8 1.0 3.6922e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 +BuildTwoSided 5 1.0 4.3315e-02 2.3 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 +BuildTwoSidedF 2 1.0 3.0676e-02 2.8 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatMult 7 1.0 3.2890e-02 2.3 1.95e+06 1.0 4.2e+01 5.6e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 174 +MatConvert 1 1.0 2.1657e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 +MatAssemblyBegin 5 1.0 3.5902e-02 1.9 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatAssemblyEnd 5 1.0 6.4260e-02 1.3 3.65e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 0 +MatGetRowIJ 4 1.0 9.3990e-06 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 1 1.0 7.9474e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 +MatSetPreallCOO 2 1.0 7.2609e-03 2.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatSetValuesCOO 2 1.0 2.6544e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecTDot 16 1.0 5.9092e-02 3.1 3.24e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 16 +VecNorm 8 1.0 2.8444e-02 3.0 1.62e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 17 +VecCopy 2 1.0 5.1316e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 9 1.0 1.5139e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 14 1.0 6.2746e-04 1.2 2.83e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1329 +VecAYPX 6 1.0 2.7051e-04 1.1 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1322 +VecScatterBegin 7 1.0 3.7575e-04 1.1 0.00e+00 0.0 4.2e+01 5.6e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 +VecScatterEnd 7 1.0 2.5029e-02 108.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetGraph 3 1.0 8.6413e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 3 1.0 1.6094e-02 1.0 0.00e+00 0.0 3.6e+01 8.1e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 +SFPack 7 1.0 8.4892e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 7 1.0 1.3579e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSetUp 1 1.0 1.4949e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 2.1430e+00 1.0 2.84e+06 1.0 4.2e+01 5.6e+03 2.4e+01 14 80 47 45 33 14 80 47 45 44 4 +PCSetUp 1 1.0 1.3924e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 9 0 0 0 3 9 0 0 0 4 0 +PCApply 8 1.0 2.0606e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 13 0 0 0 0 13 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -4058,9 +4094,9 @@ Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== -Average time to get PetscTime(): 1.559e-07 -Average time for MPI_Barrier(): 4.5516e-06 -Average time for zero size MPI_Send(): 4.85267e-06 +Average time to get PetscTime(): 1.4e-07 +Average time for MPI_Barrier(): 4.6636e-06 +Average time for zero size MPI_Send(): 4.79967e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) @@ -4116,68 +4152,68 @@ Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line -2024-11-06 01:49:37.192 ( 11.088s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2024-11-07 03:58:23.096 ( 15.853s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson strong scaling (3 processes with ndofs=30000) ==== -2024-11-06 01:49:37.354 ( 0.061s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks -2024-11-06 01:49:37.355 ( 0.062s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph -2024-11-06 01:49:37.355 ( 0.062s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:37.497 ( 0.204s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph -2024-11-06 01:49:37.498 ( 0.204s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:37.498 ( 0.204s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:37.498 ( 0.204s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 -2024-11-06 01:49:37.505 ( 0.211s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) -2024-11-06 01:49:37.505 ( 0.211s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH -2024-11-06 01:49:46.315 ( 9.022s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:46.335 ( 9.041s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:46.384 ( 9.090s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph -2024-11-06 01:49:46.697 ( 9.403s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(173) 468-52820 -2024-11-06 01:49:46.744 ( 9.451s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) -2024-11-06 01:49:46.744 ( 9.451s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) -2024-11-06 01:49:46.775 ( 9.482s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 -2024-11-06 01:49:46.799 ( 9.505s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 -2024-11-06 01:49:46.867 ( 9.573s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices -2024-11-06 01:49:46.867 ( 9.573s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 -2024-11-06 01:49:46.867 ( 9.573s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 -2024-11-06 01:49:46.887 ( 9.593s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:46.895 ( 9.601s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:46.982 ( 9.689s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.015 ( 9.721s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:47.015 ( 9.721s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.015 ( 9.721s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:47.039 ( 9.746s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 -2024-11-06 01:49:47.047 ( 9.753s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 -2024-11-06 01:49:47.047 ( 9.753s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 -2024-11-06 01:49:47.056 ( 9.762s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.056 ( 9.762s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:47.056 ( 9.763s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 -2024-11-06 01:49:47.057 ( 9.764s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:47.057 ( 9.764s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53189x4 -2024-11-06 01:49:47.096 ( 9.803s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:47.096 ( 9.803s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:47.098 ( 9.804s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:47.103 ( 9.810s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.103 ( 9.810s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:23.436 ( 0.180s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks +2024-11-07 03:58:23.436 ( 0.181s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph +2024-11-07 03:58:23.436 ( 0.181s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:58:23.797 ( 0.542s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph +2024-11-07 03:58:23.804 ( 0.549s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:23.819 ( 0.564s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:23.819 ( 0.564s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 +2024-11-07 03:58:23.849 ( 0.594s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) +2024-11-07 03:58:23.849 ( 0.594s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH +2024-11-07 03:58:33.130 ( 9.875s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:58:33.147 ( 9.892s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:58:33.182 ( 9.926s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph +2024-11-07 03:58:33.426 ( 10.171s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(169) 51642-1875 +2024-11-07 03:58:33.456 ( 10.200s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) +2024-11-07 03:58:33.456 ( 10.200s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) +2024-11-07 03:58:33.702 ( 10.447s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 +2024-11-07 03:58:33.702 ( 10.447s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 +2024-11-07 03:58:33.766 ( 10.511s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices +2024-11-07 03:58:33.766 ( 10.511s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 +2024-11-07 03:58:33.771 ( 10.516s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 +2024-11-07 03:58:33.789 ( 10.534s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:58:33.790 ( 10.534s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:58:33.821 ( 10.566s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:33.859 ( 10.604s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:33.860 ( 10.604s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:33.860 ( 10.604s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:33.888 ( 10.633s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 +2024-11-07 03:58:33.888 ( 10.633s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 +2024-11-07 03:58:33.888 ( 10.633s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 +2024-11-07 03:58:33.890 ( 10.634s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:33.890 ( 10.634s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:33.890 ( 10.634s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 +2024-11-07 03:58:33.891 ( 10.636s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:58:33.892 ( 10.636s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53210x4 +2024-11-07 03:58:33.914 ( 10.659s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:58:33.914 ( 10.659s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:58:33.915 ( 10.660s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:58:33.948 ( 10.692s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:33.948 ( 10.693s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times -2024-11-06 01:49:47.119 ( 9.826s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 -2024-11-06 01:49:47.228 ( 9.934s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.243 ( 9.949s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:47.495 ( 10.201s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.495 ( 10.202s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:47.507 ( 10.214s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-11-06 01:49:47.507 ( 10.214s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. -2024-11-06 01:49:47.516 ( 10.223s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension -2024-11-06 01:49:47.517 ( 10.223s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53189x4 -2024-11-06 01:49:47.559 ( 10.265s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation -2024-11-06 01:49:47.559 ( 10.266s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps -2024-11-06 01:49:47.560 ( 10.267s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices -2024-11-06 01:49:47.567 ( 10.274s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 -2024-11-06 01:49:47.567 ( 10.274s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 -2024-11-06 01:49:47.569 ( 10.275s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:47.570 ( 10.277s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) -2024-11-06 01:49:47.570 ( 10.277s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) -2024-11-06 01:49:47.733 ( 10.439s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) -2024-11-06 01:49:47.733 ( 10.439s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) -2024-11-06 01:49:47.860 ( 10.566s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 434 to 1213 +2024-11-07 03:58:33.968 ( 10.712s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 +2024-11-07 03:58:34.029 ( 10.774s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:34.107 ( 10.851s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:34.405 ( 11.150s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:34.405 ( 11.150s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:34.412 ( 11.157s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2024-11-07 03:58:34.412 ( 11.157s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. +2024-11-07 03:58:34.418 ( 11.163s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension +2024-11-07 03:58:34.418 ( 11.163s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53210x4 +2024-11-07 03:58:34.441 ( 11.185s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation +2024-11-07 03:58:34.441 ( 11.186s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps +2024-11-07 03:58:34.442 ( 11.187s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices +2024-11-07 03:58:34.487 ( 11.232s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 +2024-11-07 03:58:34.495 ( 11.240s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 +2024-11-07 03:58:34.497 ( 11.242s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:58:34.498 ( 11.243s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) +2024-11-07 03:58:34.498 ( 11.243s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) +2024-11-07 03:58:34.582 ( 11.327s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) +2024-11-07 03:58:34.582 ( 11.327s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) +2024-11-07 03:58:34.796 ( 11.541s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 477 to 1308 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 @@ -4191,7 +4227,7 @@ Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- -2024-11-06 01:49:48.299 ( 11.006s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. +2024-11-07 03:58:35.263 ( 12.008s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero @@ -4235,43 +4271,43 @@ total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines -[MPI_MAX] Summary of timings | reps wall avg wall tot -------------------------------------------------------------------------------------------------------- -Build BoxMesh (tetrahedra) | 1 9.770000 9.770000 -Build dofmap data | 2 0.055000 0.110000 -Build sparsity | 1 0.050000 0.050000 -Compute connectivity 2-0 | 1 0.010000 0.010000 -Compute dof reordering map | 2 0.005000 0.010000 -Compute entities of dim = 2 | 1 0.390000 0.390000 -Compute graph partition (SCOTCH) | 1 8.770000 8.770000 -Compute local part of mesh dual graph | 2 0.205000 0.410000 -Compute local-to-local map | 1 0.000000 0.000000 -Compute non-local part of mesh dual graph | 1 0.010000 0.010000 -Compute-local-to-global links for global/local adjacency list | 1 0.010000 0.010000 -Distribute AdjacencyList nodes to destination ranks | 1 0.120000 0.120000 -Distribute row-wise data (scalable) | 1 0.020000 0.020000 -GPS: create_level_structure | 4 0.010000 0.040000 -Gibbs-Poole-Stockmeyer ordering | 1 0.080000 0.080000 -Init MPI | 1 0.050000 0.050000 -Init PETSc | 1 0.000000 0.000000 -Init dofmap from element dofmap | 2 0.045000 0.090000 -Init logging | 1 0.000000 0.000000 -PETSc Krylov solver | 1 2.190000 2.190000 -SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 -SCOTCH: call SCOTCH_dgraphPart | 1 8.760000 8.760000 -SparsityPattern::finalize | 1 0.080000 0.080000 -Topology: create | 1 0.460000 0.460000 -Topology: determine shared index ownership | 1 0.240000 0.240000 -Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.030000 0.030000 -ZZZ Assemble | 1 0.680000 0.680000 -ZZZ Assemble matrix | 1 0.310000 0.310000 -ZZZ Assemble vector | 1 0.060000 0.060000 -ZZZ Create Mesh | 1 9.780000 9.780000 -ZZZ Create RHS function | 1 0.160000 0.160000 -ZZZ Create boundary conditions | 1 0.020000 0.020000 -ZZZ Create facets and facet->cell connectivity | 1 0.390000 0.390000 -ZZZ FunctionSpace | 1 0.060000 0.060000 -ZZZ Solve | 1 2.240000 2.240000 +[MPI_MAX] Summary of timings | reps wall avg wall tot +--------------------------------------------------------------------------------------------------------- +Build BoxMesh (tetrahedra) | 1 10.560000 10.560000 +Build dofmap data | 2 0.070000 0.140000 +Build sparsity | 1 0.130000 0.130000 +Compute connectivity 2-0 | 1 0.010000 0.010000 +Compute dof reordering map | 2 0.005000 0.010000 +Compute entities of dim = 2 | 1 0.460000 0.460000 +Compute graph partition (SCOTCH) | 1 9.260000 9.260000 +Compute local part of mesh dual graph | 2 0.365000 0.730000 +Compute local-to-local map | 1 0.000000 0.000000 +Compute non-local part of mesh dual graph | 1 0.250000 0.250000 +Compute-local-to-global links for global/local adjacency list | 1 0.010000 0.010000 +Distribute AdjacencyList nodes to destination ranks | 1 0.100000 0.100000 +Distribute row-wise data (scalable) | 1 0.000000 0.000000 +GPS: create_level_structure | 2 0.006667 0.020000 +Gibbs-Poole-Stockmeyer ordering | 1 0.060000 0.060000 +Init MPI | 1 0.130000 0.130000 +Init PETSc | 1 0.030000 0.030000 +Init dofmap from element dofmap | 2 0.060000 0.120000 +Init logging | 1 0.000000 0.000000 +PETSc Krylov solver | 1 4.420000 4.420000 +SCOTCH: call SCOTCH_dgraphBuild | 1 0.020000 0.020000 +SCOTCH: call SCOTCH_dgraphPart | 1 9.240000 9.240000 +SparsityPattern::finalize | 1 0.080000 0.080000 +Topology: create | 1 0.420000 0.420000 +Topology: determine shared index ownership | 1 0.250000 0.250000 +Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.030000 0.030000 +ZZZ Assemble | 1 0.650000 0.650000 +ZZZ Assemble matrix | 1 0.280000 0.280000 +ZZZ Assemble vector | 1 0.070000 0.070000 +ZZZ Create Mesh | 1 10.560000 10.560000 +ZZZ Create RHS function | 1 0.150000 0.150000 +ZZZ Create boundary conditions | 1 0.010000 0.010000 +ZZZ Create facets and facet->cell connectivity | 1 0.460000 0.460000 +ZZZ FunctionSpace | 1 0.080000 0.080000 +ZZZ Solve | 1 4.500000 4.500000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** @@ -4280,16 +4316,16 @@ ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ -/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt64a with 3 processes, by pbuilder1 on Wed Nov 6 01:49:50 2024 +/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processes, by pbuilder2 on Thu Nov 7 03:58:39 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total -Time (sec): 1.315e+01 1.000 1.315e+01 +Time (sec): 1.628e+01 1.000 1.628e+01 Objects: 0.000e+00 0.000 0.000e+00 -Flops: 3.524e+06 1.020 3.489e+06 1.047e+07 -Flops/sec: 2.680e+05 1.020 2.653e+05 7.960e+05 +Flops: 3.538e+06 1.025 3.489e+06 1.047e+07 +Flops/sec: 2.173e+05 1.026 2.143e+05 6.429e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 -MPI Msg Len (bytes): 1.813e+05 1.205 5.673e+03 5.106e+05 +MPI Msg Len (bytes): 1.933e+05 1.195 5.950e+03 5.355e+05 MPI Reductions: 7.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) @@ -4298,7 +4334,7 @@ Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total - 0: Main Stage: 1.3152e+01 100.0% 1.0468e+07 100.0% 9.000e+01 100.0% 5.673e+03 100.0% 5.400e+01 75.0% + 0: Main Stage: 1.6278e+01 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.950e+03 100.0% 5.400e+01 75.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. @@ -4322,32 +4358,32 @@ --- Event Stage 0: Main Stage -BuildTwoSided 5 1.0 6.5121e-02 23.0 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 -BuildTwoSidedF 2 1.0 6.5126e-02 22.6 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatMult 7 1.0 2.1429e-02 2.0 1.93e+06 1.0 4.2e+01 5.4e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 267 -MatConvert 1 1.0 4.9945e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 -MatAssemblyBegin 5 1.0 6.8763e-02 4.6 0.00e+00 0.0 1.2e+01 2.1e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 -MatAssemblyEnd 5 1.0 5.1768e-02 1.1 3.66e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 0 -MatGetRowIJ 4 1.0 9.6790e-06 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatView 1 1.0 6.0039e-03 46.7 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 -MatSetPreallCOO 2 1.0 7.6858e-03 2.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -MatSetValuesCOO 2 1.0 2.5283e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecTDot 16 1.0 2.8903e-02 13.9 3.20e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 33 -VecNorm 8 1.0 2.7742e-02 1.5 1.60e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 17 -VecCopy 2 1.0 5.7515e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecSet 9 1.0 1.4831e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -VecAXPY 14 1.0 5.3895e-04 1.3 2.80e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1548 -VecAYPX 6 1.0 2.6092e-04 1.4 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1370 -VecScatterBegin 7 1.0 4.3601e-03 11.5 0.00e+00 0.0 4.2e+01 5.4e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 -VecScatterEnd 7 1.0 1.4355e-02 60.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetGraph 3 1.0 8.1172e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFSetUp 3 1.0 4.0216e-04 1.0 0.00e+00 0.0 3.6e+01 7.9e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 -SFPack 7 1.0 1.3663e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -SFUnpack 7 1.0 1.0659e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSetUp 1 1.0 1.5557e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 -KSPSolve 1 1.0 1.1801e+00 1.0 2.81e+06 1.0 4.2e+01 5.4e+03 2.4e+01 9 80 47 45 33 9 80 47 45 44 7 -PCSetUp 1 1.0 1.0095e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 8 0 0 0 3 8 0 0 0 4 0 -PCApply 8 1.0 1.1282e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 9 0 0 0 0 9 0 0 0 0 0 +BuildTwoSided 5 1.0 1.2023e-01 3.2 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 +BuildTwoSidedF 2 1.0 9.6614e-02 15.6 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatMult 7 1.0 2.2870e-02 1.6 1.94e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 251 +MatConvert 1 1.0 1.0621e-01 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 +MatAssemblyBegin 5 1.0 1.0073e-01 7.2 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 +MatAssemblyEnd 5 1.0 8.2169e-02 1.1 3.80e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 0 +MatGetRowIJ 4 1.0 1.0800e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatView 1 1.0 1.4003e-02 2.1 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 +MatSetPreallCOO 2 1.0 7.0397e-03 2.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +MatSetValuesCOO 2 1.0 2.4487e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecTDot 16 1.0 4.3158e-02 1.3 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 22 +VecNorm 8 1.0 4.8434e-02 1.6 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 10 +VecCopy 2 1.0 4.3756e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecSet 9 1.0 4.8212e-04 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +VecAXPY 14 1.0 1.3494e-03 2.6 2.81e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 618 +VecAYPX 6 1.0 5.5417e-04 2.3 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 645 +VecScatterBegin 7 1.0 3.4423e-04 1.2 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 +VecScatterEnd 7 1.0 1.0681e-02 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetGraph 3 1.0 8.8052e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFSetUp 3 1.0 3.6077e-02 1.1 0.00e+00 0.0 3.6e+01 8.3e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 +SFPack 7 1.0 9.7432e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +SFUnpack 7 1.0 1.1979e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSetUp 1 1.0 1.5862e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 +KSPSolve 1 1.0 1.8697e+00 1.0 2.82e+06 1.0 4.2e+01 5.7e+03 2.4e+01 11 80 47 45 33 11 80 47 45 44 4 +PCSetUp 1 1.0 2.5477e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 16 0 0 0 3 16 0 0 0 4 0 +PCApply 8 1.0 1.7805e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 11 0 0 0 0 11 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. @@ -4364,9 +4400,9 @@ Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== -Average time to get PetscTime(): 1.44e-07 -Average time for MPI_Barrier(): 4.3876e-06 -Average time for zero size MPI_Send(): 4.13967e-06 +Average time to get PetscTime(): 1.42e-07 +Average time for MPI_Barrier(): 4.9154e-06 +Average time for zero size MPI_Send(): 4.95267e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) @@ -4422,13 +4458,13 @@ Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: strong source: command line -2024-11-06 01:49:50.581 ( 13.287s) [RANK: 0 ] loguru.cpp:526 INFO| atexit +2024-11-07 03:58:40.210 ( 16.955s) [RANK: 0 ] loguru.cpp:526 INFO| atexit make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src - cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4464,8 +4500,8 @@ dh_gencontrol -O--buildsystem=cmake -O--sourcedirectory=src dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src -dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.8.0-1_armhf.deb'. dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.8.0-1_armhf.deb'. +dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.8.0-1_armhf.deb'. dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.8.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../fenicsx-performance-tests_0.8.0-1_armhf.buildinfo dpkg-genchanges --build=binary -O../fenicsx-performance-tests_0.8.0-1_armhf.changes @@ -4474,12 +4510,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/25131/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/6915 and its subdirectories -I: Current time: Wed Nov 6 01:50:25 -12 2024 -I: pbuilder-time-stamp: 1730901025 +I: removing directory /srv/workspace/pbuilder/25131 and its subdirectories +I: Current time: Thu Nov 7 03:59:11 +14 2024 +I: pbuilder-time-stamp: 1730901551