Diff of the two buildlogs: -- --- b1/build.log 2024-05-29 18:20:49.696730227 +0000 +++ b2/build.log 2024-05-29 18:25:00.998070530 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed May 29 06:19:11 -12 2024 -I: pbuilder-time-stamp: 1717006751 +I: Current time: Thu May 30 08:21:05 +14 2024 +I: pbuilder-time-stamp: 1717006865 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -32,52 +32,84 @@ dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/29065/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/D01_modify_environment starting +debug: Running on ff4a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 29 18:21 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='61c3039ab34b4e23975278c06c627ae5' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='29065' - PS1='# ' - PS2='> ' + INVOCATION_ID=f0a61bcd0cf74af1bfa1600026a5b9ca + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2746 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qkf4pPX7/pbuilderrc_Obrt --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qkf4pPX7/b1 --logfile b1/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' - SUDO_GID='110' - SUDO_UID='103' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qkf4pPX7/pbuilderrc_ULcR --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qkf4pPX7/b2 --logfile b2/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt64z 6.1.0-21-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-21-armmp-lpae #1 SMP Debian 6.1.90-1 (2024-05-03) armv7l GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 25 07:44 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/29065/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 26 07:45 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -145,7 +177,7 @@ Get: 28 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1 [904 kB] -Fetched 19.3 MB in 1s (21.5 MB/s) +Fetched 19.3 MB in 1s (14.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19461 files and directories currently installed.) @@ -280,7 +312,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20240115.be65e59-1 dpkg-buildpackage: info: source distribution unstable @@ -290,7 +326,7 @@ debian/rules clean dh clean dh_auto_clean - make -j3 clean + make -j4 clean make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE rm -fr *.dSYM @@ -303,11 +339,12 @@ dh_autoreconf dh_auto_configure dh_auto_build - make -j3 "INSTALL=install --strip-program=true" + make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva In file included from /usr/include/stdio.h:964, from fasta2DB.c:24: In function 'fprintf', @@ -345,9 +382,6 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -356,6 +390,10 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -372,9 +410,6 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -391,6 +426,10 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv +cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -399,9 +438,6 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv -cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -428,6 +464,7 @@ | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta In file included from /usr/include/stdio.h:964, from fasta2DAM.c:24: In function 'fprintf', @@ -441,31 +478,6 @@ fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta -QV.c: In function 'Build_Table': -QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 127 | { uint64 symbol = (uint64) (node->lft); - | ^ -QV.c: In function 'Huffman': -QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] - 174 | node[value].lft = (HTree *) (uint64) i; - | ^ -QV.c: In function 'Build_Table': -QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 127 | { uint64 symbol = (uint64) (node->lft); - | ^ -QV.c: In function 'Huffman': -QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] - 174 | node[value].lft = (HTree *) (uint64) i; - | ^ -QV.c: In function 'Build_Table': -QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 127 | { uint64 symbol = (uint64) (node->lft); - | ^ -QV.c: In function 'Huffman': -QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] - 174 | node[value].lft = (HTree *) (uint64) i; - | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB arrow2DB.c: In function 'main': @@ -488,8 +500,6 @@ arrow2DB.c:212:33: note: 'cline' was declared here 212 | int first, last, cline; | ^~~~~ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -514,6 +524,16 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ +QV.c: In function 'Build_Table': +QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] + 127 | { uint64 symbol = (uint64) (node->lft); + | ^ +QV.c: In function 'Huffman': +QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] + 174 | node[value].lft = (HTree *) (uint64) i; + | ^ +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE QV.c: In function 'Build_Table': @@ -532,6 +552,22 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ +QV.c: In function 'Build_Table': +QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] + 127 | { uint64 symbol = (uint64) (node->lft); + | ^ +QV.c: In function 'Huffman': +QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] + 174 | node[value].lft = (HTree *) (uint64) i; + | ^ +QV.c: In function 'Build_Table': +QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] + 127 | { uint64 symbol = (uint64) (node->lft); + | ^ +QV.c: In function 'Huffman': +QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] + 174 | node[value].lft = (HTree *) (uint64) i; + | ^ ONElib.c: In function 'readBuf': ONElib.c:617:40: warning: comparison is always false due to limited range of data type [-Wtype-limits] 617 | if (isspace(x) || x == '\0' || x == EOF) @@ -768,7 +804,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_install - make -j3 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20240115.be65e59/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + make -j4 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20240115.be65e59/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' install -d /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin @@ -798,8 +834,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20240115.be65e59-1_armhf.deb'. dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20240115.be65e59-1_armhf.deb'. +dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20240115.be65e59-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_armhf.buildinfo dpkg-genchanges --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -807,12 +843,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2746/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/29065 and its subdirectories -I: Current time: Wed May 29 06:20:45 -12 2024 -I: pbuilder-time-stamp: 1717006845 +I: removing directory /srv/workspace/pbuilder/2746 and its subdirectories +I: Current time: Thu May 30 08:24:53 +14 2024 +I: pbuilder-time-stamp: 1717007093