Diff of the two buildlogs: -- --- b1/build.log 2024-12-03 17:22:48.325251770 +0000 +++ b2/build.log 2024-12-03 17:38:45.398033581 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Dec 3 05:17:14 -12 2024 -I: pbuilder-time-stamp: 1733246234 +I: Current time: Wed Dec 4 07:23:16 +14 2024 +I: pbuilder-time-stamp: 1733246596 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: applying build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/23178/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/D01_modify_environment starting +debug: Running on virt64c. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 3 17:23 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='2386966fb7af4b4b87e69c85d70f41b8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='23178' - PS1='# ' - PS2='> ' + INVOCATION_ID=31907392dc2341029d44ab6fd7536a65 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=31534 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ntj6k8wk/pbuilderrc_VXNX --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ntj6k8wk/b1 --logfile b1/build.log cdk_2.9-2.dsc' - SUDO_GID='110' - SUDO_UID='103' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ntj6k8wk/pbuilderrc_rLrm --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ntj6k8wk/b2 --logfile b2/build.log cdk_2.9-2.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32z 6.1.0-28-armmp-lpae #1 SMP Debian 6.1.119-1 (2024-11-22) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/23178/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -515,7 +547,7 @@ Get: 348 http://deb.debian.org/debian unstable/main armhf maven all 3.8.8-2 [19.5 kB] Get: 349 http://deb.debian.org/debian unstable/main armhf maven-repo-helper all 1.11 [142 kB] Get: 350 http://deb.debian.org/debian unstable/main armhf maven-debian-helper all 2.6.5 [108 kB] -Fetched 271 MB in 4s (73.3 MB/s) +Fetched 271 MB in 10s (27.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19683 files and directories currently installed.) @@ -2142,7 +2174,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/cdk-2.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cdk_2.9-2_source.changes +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/cdk-2.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cdk_2.9-2_source.changes dpkg-buildpackage: info: source package cdk dpkg-buildpackage: info: source version 1:2.9-2 dpkg-buildpackage: info: source distribution unstable @@ -2434,8 +2470,8 @@ [WARNING] source value 8 is obsolete and will be removed in a future release [WARNING] target value 8 is obsolete and will be removed in a future release [WARNING] To suppress warnings about obsolete options, use -Xlint:-options. -[INFO] /build/reproducible-path/cdk-2.9/base/data/src/main/java/org/openscience/cdk/AtomContainer.java: Some input files use or override a deprecated API. -[INFO] /build/reproducible-path/cdk-2.9/base/data/src/main/java/org/openscience/cdk/AtomContainer.java: Recompile with -Xlint:deprecation for details. +[INFO] /build/reproducible-path/cdk-2.9/base/data/src/main/java/org/openscience/cdk/Atom.java: Some input files use or override a deprecated API. +[INFO] /build/reproducible-path/cdk-2.9/base/data/src/main/java/org/openscience/cdk/Atom.java: Recompile with -Xlint:deprecation for details. [INFO] /build/reproducible-path/cdk-2.9/base/data/src/main/java/org/openscience/cdk/AtomContainer.java: Some input files use unchecked or unsafe operations. [INFO] /build/reproducible-path/cdk-2.9/base/data/src/main/java/org/openscience/cdk/AtomContainer.java: Recompile with -Xlint:unchecked for details. [INFO] @@ -4227,10 +4263,10 @@ File "SMARTSParserVisitor.java" does not exist. Will create one. File "SMARTSParserDefaultVisitor.java" does not exist. Will create one. File "JJTSMARTSParserState.java" does not exist. Will create one. -Annotated grammar generated successfully in /build/reproducible-path/cdk-2.9/legacy/target/javacc-1733246452864/node/SMARTSParser.jj +Annotated grammar generated successfully in /build/reproducible-path/cdk-2.9/legacy/target/javacc-1733247231673/node/SMARTSParser.jj Java Compiler Compiler Version 7.0.12 (Parser Generator) (type "javacc" with no arguments for help) -Reading from file /build/reproducible-path/cdk-2.9/legacy/target/javacc-1733246452864/node/SMARTSParser.jj . . . +Reading from file /build/reproducible-path/cdk-2.9/legacy/target/javacc-1733247231673/node/SMARTSParser.jj . . . File "TokenMgrError.java" does not exist. Will create one. File "ParseException.java" does not exist. Will create one. File "Token.java" does not exist. Will create one. @@ -4314,75 +4350,75 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for cdk 2.9: [INFO] -[INFO] cdk ................................................ SUCCESS [ 1.520 s] -[INFO] cdk-base ........................................... SUCCESS [ 0.010 s] -[INFO] cdk-interfaces ..................................... SUCCESS [ 5.897 s] -[INFO] cdk-core ........................................... SUCCESS [ 6.109 s] -[INFO] cdk-standard ....................................... SUCCESS [ 3.900 s] -[INFO] cdk-atomtype ....................................... SUCCESS [ 0.502 s] -[INFO] cdk-valencycheck ................................... SUCCESS [ 0.509 s] -[INFO] cdk-data ........................................... SUCCESS [ 2.402 s] -[INFO] cdk-silent ......................................... SUCCESS [ 1.627 s] -[INFO] cdk-datadebug ...................................... SUCCESS [ 1.570 s] -[INFO] cdk-isomorphism .................................... SUCCESS [ 1.099 s] -[INFO] cdk-dict ........................................... SUCCESS [ 0.355 s] -[INFO] cdk-reaction ....................................... SUCCESS [ 1.137 s] -[INFO] cdk-storage ........................................ SUCCESS [ 0.008 s] -[INFO] cdk-ioformats ...................................... SUCCESS [ 0.751 s] -[INFO] cdk-ctab ........................................... SUCCESS [ 1.482 s] -[INFO] cdk-tool ........................................... SUCCESS [ 0.013 s] -[INFO] cdk-smarts ......................................... SUCCESS [ 0.774 s] -[INFO] cdk-formula ........................................ SUCCESS [ 0.759 s] -[INFO] cdk-descriptor ..................................... SUCCESS [ 0.011 s] -[INFO] cdk-fingerprint .................................... SUCCESS [ 1.203 s] -[INFO] cdk-cip ............................................ SUCCESS [ 0.358 s] -[INFO] cdk-signature ...................................... SUCCESS [ 0.336 s] -[INFO] cdk-qsar ........................................... SUCCESS [ 0.334 s] -[INFO] cdk-charges ........................................ SUCCESS [ 0.521 s] -[INFO] cdk-forcefield ..................................... SUCCESS [ 0.805 s] -[INFO] cdk-qsaratomic ..................................... SUCCESS [ 0.938 s] -[INFO] cdk-qsarbond ....................................... SUCCESS [ 0.331 s] -[INFO] cdk-io ............................................. SUCCESS [ 1.715 s] -[INFO] cdk-libiocml ....................................... SUCCESS [ 0.538 s] -[INFO] cdk-qsarcml ........................................ SUCCESS [ 0.299 s] -[INFO] cdk-smiles ......................................... SUCCESS [ 0.809 s] -[INFO] cdk-hash ........................................... SUCCESS [ 0.478 s] -[INFO] cdk-fragment ....................................... SUCCESS [ 0.302 s] -[INFO] cdk-qsarmolecular .................................. SUCCESS [ 1.835 s] -[INFO] cdk-pdb ............................................ SUCCESS [ 0.812 s] -[INFO] cdk-qsarprotein .................................... SUCCESS [ 0.283 s] -[INFO] cdk-qsarsubstance .................................. SUCCESS [ 0.214 s] -[INFO] cdk-display ........................................ SUCCESS [ 0.007 s] -[INFO] cdk-render ......................................... SUCCESS [ 0.462 s] -[INFO] cdk-renderbasic .................................... SUCCESS [ 1.206 s] -[INFO] cdk-renderawt ...................................... SUCCESS [ 0.308 s] -[INFO] cdk-renderextra .................................... SUCCESS [ 0.548 s] -[INFO] cdk-misc ........................................... SUCCESS [ 0.009 s] -[INFO] cdk-control ........................................ SUCCESS [ 0.177 s] -[INFO] cdk-extra .......................................... SUCCESS [ 1.332 s] -[INFO] cdk-diff ........................................... SUCCESS [ 0.436 s] -[INFO] cdk-log4j .......................................... SUCCESS [ 0.192 s] -[INFO] cdk-slf4j .......................................... SUCCESS [ 0.153 s] -[INFO] cdk-libiomd ........................................ SUCCESS [ 0.395 s] -[INFO] cdk-pdbcml ......................................... SUCCESS [ 0.277 s] -[INFO] cdk-jniinchi-support ............................... SUCCESS [ 0.115 s] -[INFO] cdk-inchi .......................................... SUCCESS [ 0.431 s] -[INFO] cdk-sdg ............................................ SUCCESS [ 1.152 s] -[INFO] cdk-builder3d ...................................... SUCCESS [ 0.648 s] -[INFO] cdk-builder3dtools ................................. SUCCESS [ 0.235 s] -[INFO] cdk-group .......................................... SUCCESS [ 0.318 s] -[INFO] cdk-pcore .......................................... SUCCESS [ 0.346 s] -[INFO] cdk-structgen ...................................... SUCCESS [ 0.641 s] -[INFO] cdk-tautomer ....................................... SUCCESS [ 0.289 s] -[INFO] cdk-model .......................................... SUCCESS [ 0.240 s] -[INFO] cdk-legacy ......................................... SUCCESS [ 6.113 s] -[INFO] cdk-app ............................................ SUCCESS [ 0.007 s] -[INFO] cdk-depict ......................................... SUCCESS [ 0.990 s] +[INFO] cdk ................................................ SUCCESS [ 5.027 s] +[INFO] cdk-base ........................................... SUCCESS [ 0.039 s] +[INFO] cdk-interfaces ..................................... SUCCESS [ 20.567 s] +[INFO] cdk-core ........................................... SUCCESS [ 24.032 s] +[INFO] cdk-standard ....................................... SUCCESS [ 18.102 s] +[INFO] cdk-atomtype ....................................... SUCCESS [ 1.930 s] +[INFO] cdk-valencycheck ................................... SUCCESS [ 2.672 s] +[INFO] cdk-data ........................................... SUCCESS [ 13.363 s] +[INFO] cdk-silent ......................................... SUCCESS [ 9.581 s] +[INFO] cdk-datadebug ...................................... SUCCESS [ 7.507 s] +[INFO] cdk-isomorphism .................................... SUCCESS [ 5.237 s] +[INFO] cdk-dict ........................................... SUCCESS [ 1.556 s] +[INFO] cdk-reaction ....................................... SUCCESS [ 5.722 s] +[INFO] cdk-storage ........................................ SUCCESS [ 0.039 s] +[INFO] cdk-ioformats ...................................... SUCCESS [ 5.235 s] +[INFO] cdk-ctab ........................................... SUCCESS [ 7.271 s] +[INFO] cdk-tool ........................................... SUCCESS [ 0.046 s] +[INFO] cdk-smarts ......................................... SUCCESS [ 3.122 s] +[INFO] cdk-formula ........................................ SUCCESS [ 3.107 s] +[INFO] cdk-descriptor ..................................... SUCCESS [ 0.031 s] +[INFO] cdk-fingerprint .................................... SUCCESS [ 4.730 s] +[INFO] cdk-cip ............................................ SUCCESS [ 1.419 s] +[INFO] cdk-signature ...................................... SUCCESS [ 1.330 s] +[INFO] cdk-qsar ........................................... SUCCESS [ 1.102 s] +[INFO] cdk-charges ........................................ SUCCESS [ 1.846 s] +[INFO] cdk-forcefield ..................................... SUCCESS [ 3.348 s] +[INFO] cdk-qsaratomic ..................................... SUCCESS [ 3.605 s] +[INFO] cdk-qsarbond ....................................... SUCCESS [ 1.107 s] +[INFO] cdk-io ............................................. SUCCESS [ 5.495 s] +[INFO] cdk-libiocml ....................................... SUCCESS [ 2.069 s] +[INFO] cdk-qsarcml ........................................ SUCCESS [ 1.482 s] +[INFO] cdk-smiles ......................................... SUCCESS [ 3.064 s] +[INFO] cdk-hash ........................................... SUCCESS [ 2.058 s] +[INFO] cdk-fragment ....................................... SUCCESS [ 0.865 s] +[INFO] cdk-qsarmolecular .................................. SUCCESS [ 5.620 s] +[INFO] cdk-pdb ............................................ SUCCESS [ 1.883 s] +[INFO] cdk-qsarprotein .................................... SUCCESS [ 0.824 s] +[INFO] cdk-qsarsubstance .................................. SUCCESS [ 0.588 s] +[INFO] cdk-display ........................................ SUCCESS [ 0.014 s] +[INFO] cdk-render ......................................... SUCCESS [ 1.407 s] +[INFO] cdk-renderbasic .................................... SUCCESS [ 4.122 s] +[INFO] cdk-renderawt ...................................... SUCCESS [ 1.065 s] +[INFO] cdk-renderextra .................................... SUCCESS [ 1.513 s] +[INFO] cdk-misc ........................................... SUCCESS [ 0.025 s] +[INFO] cdk-control ........................................ SUCCESS [ 0.534 s] +[INFO] cdk-extra .......................................... SUCCESS [ 3.329 s] +[INFO] cdk-diff ........................................... SUCCESS [ 1.038 s] +[INFO] cdk-log4j .......................................... SUCCESS [ 0.627 s] +[INFO] cdk-slf4j .......................................... SUCCESS [ 0.665 s] +[INFO] cdk-libiomd ........................................ SUCCESS [ 1.253 s] +[INFO] cdk-pdbcml ......................................... SUCCESS [ 0.855 s] +[INFO] cdk-jniinchi-support ............................... SUCCESS [ 0.484 s] +[INFO] cdk-inchi .......................................... SUCCESS [ 1.057 s] +[INFO] cdk-sdg ............................................ SUCCESS [ 3.429 s] +[INFO] cdk-builder3d ...................................... SUCCESS [ 2.089 s] +[INFO] cdk-builder3dtools ................................. SUCCESS [ 0.881 s] +[INFO] cdk-group .......................................... SUCCESS [ 1.015 s] +[INFO] cdk-pcore .......................................... SUCCESS [ 0.986 s] +[INFO] cdk-structgen ...................................... SUCCESS [ 1.937 s] +[INFO] cdk-tautomer ....................................... SUCCESS [ 0.806 s] +[INFO] cdk-model .......................................... SUCCESS [ 0.696 s] +[INFO] cdk-legacy ......................................... SUCCESS [ 19.114 s] +[INFO] cdk-app ............................................ SUCCESS [ 0.033 s] +[INFO] cdk-depict ......................................... SUCCESS [ 3.112 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 01:00 min -[INFO] Finished at: 2024-12-03T17:20:59Z +[INFO] Total time: 03:53 min +[INFO] Finished at: 2024-12-03T17:34:10Z [INFO] ------------------------------------------------------------------------ dh_auto_test /usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/cdk-2.9 -Dclassworlds.conf=/etc/maven/m2-debian.conf -Dproperties.file.manual=/build/reproducible-path/cdk-2.9/debian/maven.properties org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/cdk-2.9/debian -Dmaven.repo.local=/build/reproducible-path/cdk-2.9/debian/maven-repo --batch-mode test @@ -5915,75 +5951,75 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for cdk 2.9: [INFO] -[INFO] cdk ................................................ SUCCESS [ 1.714 s] -[INFO] cdk-base ........................................... SUCCESS [ 0.011 s] -[INFO] cdk-interfaces ..................................... SUCCESS [ 2.124 s] -[INFO] cdk-core ........................................... SUCCESS [ 1.150 s] -[INFO] cdk-standard ....................................... SUCCESS [ 0.711 s] -[INFO] cdk-atomtype ....................................... SUCCESS [ 0.343 s] -[INFO] cdk-valencycheck ................................... SUCCESS [ 0.268 s] -[INFO] cdk-data ........................................... SUCCESS [ 0.405 s] -[INFO] cdk-silent ......................................... SUCCESS [ 0.358 s] -[INFO] cdk-datadebug ...................................... SUCCESS [ 0.312 s] -[INFO] cdk-isomorphism .................................... SUCCESS [ 0.344 s] -[INFO] cdk-dict ........................................... SUCCESS [ 0.166 s] -[INFO] cdk-reaction ....................................... SUCCESS [ 0.274 s] -[INFO] cdk-storage ........................................ SUCCESS [ 0.006 s] -[INFO] cdk-ioformats ...................................... SUCCESS [ 0.265 s] -[INFO] cdk-ctab ........................................... SUCCESS [ 0.252 s] -[INFO] cdk-tool ........................................... SUCCESS [ 0.006 s] -[INFO] cdk-smarts ......................................... SUCCESS [ 0.196 s] -[INFO] cdk-formula ........................................ SUCCESS [ 0.194 s] -[INFO] cdk-descriptor ..................................... SUCCESS [ 0.006 s] -[INFO] cdk-fingerprint .................................... SUCCESS [ 0.373 s] -[INFO] cdk-cip ............................................ SUCCESS [ 0.189 s] -[INFO] cdk-signature ...................................... SUCCESS [ 0.174 s] -[INFO] cdk-qsar ........................................... SUCCESS [ 0.142 s] -[INFO] cdk-charges ........................................ SUCCESS [ 0.203 s] -[INFO] cdk-forcefield ..................................... SUCCESS [ 0.257 s] -[INFO] cdk-qsaratomic ..................................... SUCCESS [ 0.258 s] -[INFO] cdk-qsarbond ....................................... SUCCESS [ 0.179 s] -[INFO] cdk-io ............................................. SUCCESS [ 6.388 s] -[INFO] cdk-libiocml ....................................... SUCCESS [ 1.108 s] -[INFO] cdk-qsarcml ........................................ SUCCESS [ 0.523 s] -[INFO] cdk-smiles ......................................... SUCCESS [ 0.227 s] -[INFO] cdk-hash ........................................... SUCCESS [ 0.153 s] -[INFO] cdk-fragment ....................................... SUCCESS [ 0.175 s] -[INFO] cdk-qsarmolecular .................................. SUCCESS [ 0.331 s] -[INFO] cdk-pdb ............................................ SUCCESS [ 0.887 s] -[INFO] cdk-qsarprotein .................................... SUCCESS [ 0.377 s] -[INFO] cdk-qsarsubstance .................................. SUCCESS [ 0.124 s] -[INFO] cdk-display ........................................ SUCCESS [ 0.007 s] -[INFO] cdk-render ......................................... SUCCESS [ 0.140 s] -[INFO] cdk-renderbasic .................................... SUCCESS [ 0.269 s] -[INFO] cdk-renderawt ...................................... SUCCESS [ 0.130 s] -[INFO] cdk-renderextra .................................... SUCCESS [ 0.160 s] -[INFO] cdk-misc ........................................... SUCCESS [ 0.005 s] -[INFO] cdk-control ........................................ SUCCESS [ 0.080 s] -[INFO] cdk-extra .......................................... SUCCESS [ 2.337 s] -[INFO] cdk-diff ........................................... SUCCESS [ 0.113 s] -[INFO] cdk-log4j .......................................... SUCCESS [ 0.098 s] -[INFO] cdk-slf4j .......................................... SUCCESS [ 0.091 s] -[INFO] cdk-libiomd ........................................ SUCCESS [ 0.541 s] -[INFO] cdk-pdbcml ......................................... SUCCESS [ 0.369 s] -[INFO] cdk-jniinchi-support ............................... SUCCESS [ 0.072 s] -[INFO] cdk-inchi .......................................... SUCCESS [ 0.163 s] -[INFO] cdk-sdg ............................................ SUCCESS [ 2.391 s] -[INFO] cdk-builder3d ...................................... SUCCESS [ 0.763 s] -[INFO] cdk-builder3dtools ................................. SUCCESS [ 0.153 s] -[INFO] cdk-group .......................................... SUCCESS [ 0.171 s] -[INFO] cdk-pcore .......................................... SUCCESS [ 0.164 s] -[INFO] cdk-structgen ...................................... SUCCESS [ 0.181 s] -[INFO] cdk-tautomer ....................................... SUCCESS [ 0.145 s] -[INFO] cdk-model .......................................... SUCCESS [ 0.164 s] -[INFO] cdk-legacy ......................................... SUCCESS [ 7.508 s] -[INFO] cdk-app ............................................ SUCCESS [ 0.007 s] -[INFO] cdk-depict ......................................... SUCCESS [ 1.537 s] +[INFO] cdk ................................................ SUCCESS [ 4.349 s] +[INFO] cdk-base ........................................... SUCCESS [ 0.043 s] +[INFO] cdk-interfaces ..................................... SUCCESS [ 6.127 s] +[INFO] cdk-core ........................................... SUCCESS [ 3.273 s] +[INFO] cdk-standard ....................................... SUCCESS [ 2.117 s] +[INFO] cdk-atomtype ....................................... SUCCESS [ 1.327 s] +[INFO] cdk-valencycheck ................................... SUCCESS [ 1.183 s] +[INFO] cdk-data ........................................... SUCCESS [ 1.413 s] +[INFO] cdk-silent ......................................... SUCCESS [ 1.140 s] +[INFO] cdk-datadebug ...................................... SUCCESS [ 0.877 s] +[INFO] cdk-isomorphism .................................... SUCCESS [ 1.086 s] +[INFO] cdk-dict ........................................... SUCCESS [ 0.597 s] +[INFO] cdk-reaction ....................................... SUCCESS [ 1.130 s] +[INFO] cdk-storage ........................................ SUCCESS [ 0.030 s] +[INFO] cdk-ioformats ...................................... SUCCESS [ 0.866 s] +[INFO] cdk-ctab ........................................... SUCCESS [ 0.790 s] +[INFO] cdk-tool ........................................... SUCCESS [ 0.024 s] +[INFO] cdk-smarts ......................................... SUCCESS [ 0.784 s] +[INFO] cdk-formula ........................................ SUCCESS [ 0.878 s] +[INFO] cdk-descriptor ..................................... SUCCESS [ 0.033 s] +[INFO] cdk-fingerprint .................................... SUCCESS [ 1.905 s] +[INFO] cdk-cip ............................................ SUCCESS [ 0.994 s] +[INFO] cdk-signature ...................................... SUCCESS [ 0.706 s] +[INFO] cdk-qsar ........................................... SUCCESS [ 0.747 s] +[INFO] cdk-charges ........................................ SUCCESS [ 0.881 s] +[INFO] cdk-forcefield ..................................... SUCCESS [ 1.018 s] +[INFO] cdk-qsaratomic ..................................... SUCCESS [ 1.122 s] +[INFO] cdk-qsarbond ....................................... SUCCESS [ 0.807 s] +[INFO] cdk-io ............................................. SUCCESS [ 26.081 s] +[INFO] cdk-libiocml ....................................... SUCCESS [ 4.491 s] +[INFO] cdk-qsarcml ........................................ SUCCESS [ 1.728 s] +[INFO] cdk-smiles ......................................... SUCCESS [ 0.703 s] +[INFO] cdk-hash ........................................... SUCCESS [ 0.585 s] +[INFO] cdk-fragment ....................................... SUCCESS [ 0.524 s] +[INFO] cdk-qsarmolecular .................................. SUCCESS [ 0.890 s] +[INFO] cdk-pdb ............................................ SUCCESS [ 3.766 s] +[INFO] cdk-qsarprotein .................................... SUCCESS [ 1.169 s] +[INFO] cdk-qsarsubstance .................................. SUCCESS [ 0.369 s] +[INFO] cdk-display ........................................ SUCCESS [ 0.035 s] +[INFO] cdk-render ......................................... SUCCESS [ 0.375 s] +[INFO] cdk-renderbasic .................................... SUCCESS [ 0.952 s] +[INFO] cdk-renderawt ...................................... SUCCESS [ 0.644 s] +[INFO] cdk-renderextra .................................... SUCCESS [ 0.361 s] +[INFO] cdk-misc ........................................... SUCCESS [ 0.011 s] +[INFO] cdk-control ........................................ SUCCESS [ 0.130 s] +[INFO] cdk-extra .......................................... SUCCESS [ 7.052 s] +[INFO] cdk-diff ........................................... SUCCESS [ 0.159 s] +[INFO] cdk-log4j .......................................... SUCCESS [ 0.149 s] +[INFO] cdk-slf4j .......................................... SUCCESS [ 0.145 s] +[INFO] cdk-libiomd ........................................ SUCCESS [ 1.386 s] +[INFO] cdk-pdbcml ......................................... SUCCESS [ 0.970 s] +[INFO] cdk-jniinchi-support ............................... SUCCESS [ 0.200 s] +[INFO] cdk-inchi .......................................... SUCCESS [ 0.448 s] +[INFO] cdk-sdg ............................................ SUCCESS [ 7.973 s] +[INFO] cdk-builder3d ...................................... SUCCESS [ 2.511 s] +[INFO] cdk-builder3dtools ................................. SUCCESS [ 0.509 s] +[INFO] cdk-group .......................................... SUCCESS [ 0.451 s] +[INFO] cdk-pcore .......................................... SUCCESS [ 0.680 s] +[INFO] cdk-structgen ...................................... SUCCESS [ 0.390 s] +[INFO] cdk-tautomer ....................................... SUCCESS [ 0.446 s] +[INFO] cdk-model .......................................... SUCCESS [ 0.525 s] +[INFO] cdk-legacy ......................................... SUCCESS [ 24.389 s] +[INFO] cdk-app ............................................ SUCCESS [ 0.012 s] +[INFO] cdk-depict ......................................... SUCCESS [ 3.850 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 40.288 s -[INFO] Finished at: 2024-12-03T17:21:43Z +[INFO] Total time: 02:15 min +[INFO] Finished at: 2024-12-03T17:36:34Z [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_prep @@ -6888,75 +6924,75 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for cdk 2.9: [INFO] -[INFO] cdk ................................................ SUCCESS [ 1.181 s] -[INFO] cdk-base ........................................... SUCCESS [ 0.145 s] -[INFO] cdk-interfaces ..................................... SUCCESS [ 0.123 s] -[INFO] cdk-core ........................................... SUCCESS [ 0.132 s] -[INFO] cdk-standard ....................................... SUCCESS [ 0.110 s] -[INFO] cdk-atomtype ....................................... SUCCESS [ 0.113 s] -[INFO] cdk-valencycheck ................................... SUCCESS [ 0.106 s] -[INFO] cdk-data ........................................... SUCCESS [ 0.111 s] -[INFO] cdk-silent ......................................... SUCCESS [ 0.108 s] -[INFO] cdk-datadebug ...................................... SUCCESS [ 0.116 s] -[INFO] cdk-isomorphism .................................... SUCCESS [ 0.106 s] -[INFO] cdk-dict ........................................... SUCCESS [ 0.097 s] -[INFO] cdk-reaction ....................................... SUCCESS [ 0.104 s] -[INFO] cdk-storage ........................................ SUCCESS [ 0.084 s] -[INFO] cdk-ioformats ...................................... SUCCESS [ 0.098 s] -[INFO] cdk-ctab ........................................... SUCCESS [ 0.099 s] -[INFO] cdk-tool ........................................... SUCCESS [ 0.075 s] -[INFO] cdk-smarts ......................................... SUCCESS [ 0.111 s] -[INFO] cdk-formula ........................................ SUCCESS [ 0.099 s] -[INFO] cdk-descriptor ..................................... SUCCESS [ 0.072 s] -[INFO] cdk-fingerprint .................................... SUCCESS [ 0.098 s] -[INFO] cdk-cip ............................................ SUCCESS [ 0.104 s] -[INFO] cdk-signature ...................................... SUCCESS [ 0.095 s] -[INFO] cdk-qsar ........................................... SUCCESS [ 0.091 s] -[INFO] cdk-charges ........................................ SUCCESS [ 0.095 s] -[INFO] cdk-forcefield ..................................... SUCCESS [ 0.097 s] -[INFO] cdk-qsaratomic ..................................... SUCCESS [ 0.111 s] -[INFO] cdk-qsarbond ....................................... SUCCESS [ 0.100 s] -[INFO] cdk-io ............................................. SUCCESS [ 0.101 s] -[INFO] cdk-libiocml ....................................... SUCCESS [ 0.104 s] -[INFO] cdk-qsarcml ........................................ SUCCESS [ 0.103 s] -[INFO] cdk-smiles ......................................... SUCCESS [ 0.101 s] -[INFO] cdk-hash ........................................... SUCCESS [ 0.094 s] -[INFO] cdk-fragment ....................................... SUCCESS [ 0.092 s] -[INFO] cdk-qsarmolecular .................................. SUCCESS [ 0.114 s] -[INFO] cdk-pdb ............................................ SUCCESS [ 0.098 s] -[INFO] cdk-qsarprotein .................................... SUCCESS [ 0.095 s] -[INFO] cdk-qsarsubstance .................................. SUCCESS [ 0.091 s] -[INFO] cdk-display ........................................ SUCCESS [ 0.069 s] -[INFO] cdk-render ......................................... SUCCESS [ 0.099 s] -[INFO] cdk-renderbasic .................................... SUCCESS [ 0.095 s] -[INFO] cdk-renderawt ...................................... SUCCESS [ 0.090 s] -[INFO] cdk-renderextra .................................... SUCCESS [ 0.099 s] -[INFO] cdk-misc ........................................... SUCCESS [ 0.070 s] -[INFO] cdk-control ........................................ SUCCESS [ 0.100 s] -[INFO] cdk-extra .......................................... SUCCESS [ 0.098 s] -[INFO] cdk-diff ........................................... SUCCESS [ 0.091 s] -[INFO] cdk-log4j .......................................... SUCCESS [ 0.091 s] -[INFO] cdk-slf4j .......................................... SUCCESS [ 0.095 s] -[INFO] cdk-libiomd ........................................ SUCCESS [ 0.111 s] -[INFO] cdk-pdbcml ......................................... SUCCESS [ 0.100 s] -[INFO] cdk-jniinchi-support ............................... SUCCESS [ 0.091 s] -[INFO] cdk-inchi .......................................... SUCCESS [ 0.099 s] -[INFO] cdk-sdg ............................................ SUCCESS [ 0.113 s] -[INFO] cdk-builder3d ...................................... SUCCESS [ 0.115 s] -[INFO] cdk-builder3dtools ................................. SUCCESS [ 0.097 s] -[INFO] cdk-group .......................................... SUCCESS [ 0.101 s] -[INFO] cdk-pcore .......................................... SUCCESS [ 0.098 s] -[INFO] cdk-structgen ...................................... SUCCESS [ 0.105 s] -[INFO] cdk-tautomer ....................................... SUCCESS [ 0.095 s] -[INFO] cdk-model .......................................... SUCCESS [ 0.102 s] -[INFO] cdk-legacy ......................................... SUCCESS [ 0.099 s] -[INFO] cdk-app ............................................ SUCCESS [ 0.069 s] -[INFO] cdk-depict ......................................... SUCCESS [ 0.119 s] +[INFO] cdk ................................................ SUCCESS [ 3.787 s] +[INFO] cdk-base ........................................... SUCCESS [ 0.657 s] +[INFO] cdk-interfaces ..................................... SUCCESS [ 0.442 s] +[INFO] cdk-core ........................................... SUCCESS [ 0.424 s] +[INFO] cdk-standard ....................................... SUCCESS [ 0.348 s] +[INFO] cdk-atomtype ....................................... SUCCESS [ 0.331 s] +[INFO] cdk-valencycheck ................................... SUCCESS [ 0.280 s] +[INFO] cdk-data ........................................... SUCCESS [ 0.315 s] +[INFO] cdk-silent ......................................... SUCCESS [ 0.338 s] +[INFO] cdk-datadebug ...................................... SUCCESS [ 0.221 s] +[INFO] cdk-isomorphism .................................... SUCCESS [ 0.283 s] +[INFO] cdk-dict ........................................... SUCCESS [ 0.244 s] +[INFO] cdk-reaction ....................................... SUCCESS [ 0.348 s] +[INFO] cdk-storage ........................................ SUCCESS [ 0.208 s] +[INFO] cdk-ioformats ...................................... SUCCESS [ 0.227 s] +[INFO] cdk-ctab ........................................... SUCCESS [ 0.373 s] +[INFO] cdk-tool ........................................... SUCCESS [ 0.214 s] +[INFO] cdk-smarts ......................................... SUCCESS [ 0.357 s] +[INFO] cdk-formula ........................................ SUCCESS [ 0.380 s] +[INFO] cdk-descriptor ..................................... SUCCESS [ 0.240 s] +[INFO] cdk-fingerprint .................................... SUCCESS [ 0.232 s] +[INFO] cdk-cip ............................................ SUCCESS [ 0.325 s] +[INFO] cdk-signature ...................................... SUCCESS [ 0.126 s] +[INFO] cdk-qsar ........................................... SUCCESS [ 0.125 s] +[INFO] cdk-charges ........................................ SUCCESS [ 0.164 s] +[INFO] cdk-forcefield ..................................... SUCCESS [ 0.237 s] +[INFO] cdk-qsaratomic ..................................... SUCCESS [ 0.320 s] +[INFO] cdk-qsarbond ....................................... SUCCESS [ 0.339 s] +[INFO] cdk-io ............................................. SUCCESS [ 0.349 s] +[INFO] cdk-libiocml ....................................... SUCCESS [ 0.331 s] +[INFO] cdk-qsarcml ........................................ SUCCESS [ 0.249 s] +[INFO] cdk-smiles ......................................... SUCCESS [ 0.131 s] +[INFO] cdk-hash ........................................... SUCCESS [ 0.122 s] +[INFO] cdk-fragment ....................................... SUCCESS [ 0.152 s] +[INFO] cdk-qsarmolecular .................................. SUCCESS [ 0.286 s] +[INFO] cdk-pdb ............................................ SUCCESS [ 0.236 s] +[INFO] cdk-qsarprotein .................................... SUCCESS [ 0.297 s] +[INFO] cdk-qsarsubstance .................................. SUCCESS [ 0.292 s] +[INFO] cdk-display ........................................ SUCCESS [ 0.243 s] +[INFO] cdk-render ......................................... SUCCESS [ 0.316 s] +[INFO] cdk-renderbasic .................................... SUCCESS [ 0.303 s] +[INFO] cdk-renderawt ...................................... SUCCESS [ 0.282 s] +[INFO] cdk-renderextra .................................... SUCCESS [ 0.288 s] +[INFO] cdk-misc ........................................... SUCCESS [ 0.224 s] +[INFO] cdk-control ........................................ SUCCESS [ 0.327 s] +[INFO] cdk-extra .......................................... SUCCESS [ 0.316 s] +[INFO] cdk-diff ........................................... SUCCESS [ 0.304 s] +[INFO] cdk-log4j .......................................... SUCCESS [ 0.244 s] +[INFO] cdk-slf4j .......................................... SUCCESS [ 0.297 s] +[INFO] cdk-libiomd ........................................ SUCCESS [ 0.351 s] +[INFO] cdk-pdbcml ......................................... SUCCESS [ 0.296 s] +[INFO] cdk-jniinchi-support ............................... SUCCESS [ 0.297 s] +[INFO] cdk-inchi .......................................... SUCCESS [ 0.292 s] +[INFO] cdk-sdg ............................................ SUCCESS [ 0.260 s] +[INFO] cdk-builder3d ...................................... SUCCESS [ 0.367 s] +[INFO] cdk-builder3dtools ................................. SUCCESS [ 0.300 s] +[INFO] cdk-group .......................................... SUCCESS [ 0.324 s] +[INFO] cdk-pcore .......................................... SUCCESS [ 0.306 s] +[INFO] cdk-structgen ...................................... SUCCESS [ 0.175 s] +[INFO] cdk-tautomer ....................................... SUCCESS [ 0.388 s] +[INFO] cdk-model .......................................... SUCCESS [ 0.182 s] +[INFO] cdk-legacy ......................................... SUCCESS [ 0.270 s] +[INFO] cdk-app ............................................ SUCCESS [ 0.182 s] +[INFO] cdk-depict ......................................... SUCCESS [ 0.310 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 8.736 s -[INFO] Finished at: 2024-12-03T17:21:55Z +[INFO] Total time: 26.716 s +[INFO] Finished at: 2024-12-03T17:37:12Z [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -plibcdk-java --base-directory=/build/reproducible-path/cdk-2.9 --non-explore Analysing pom.xml... @@ -7088,12 +7124,12 @@ > dpkg --search /usr/share/maven-repo/com/googlecode/maven-java-formatter-plugin/maven-java-formatter-plugin/*/* dpkg failed to execute successfully Offline mode. Give up looking for package containing /usr/share/maven-repo/com/googlecode/maven-java-formatter-plugin/maven-java-formatter-plugin -Dec 03, 2024 5:22:05 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve +Dec 03, 2024 5:37:34 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve SEVERE: Cannot resolve dependencies in /build/reproducible-path/cdk-2.9/pom.xml: Dependency not found com.googlecode.maven-java-formatter-plugin:maven-java-formatter-plugin:maven-plugin:0.4 > dpkg --search /usr/share/maven-repo/org/openscience/cdk/cdk-build-utils/*/* dpkg failed to execute successfully Offline mode. Give up looking for package containing /usr/share/maven-repo/org/openscience/cdk/cdk-build-utils -Dec 03, 2024 5:22:10 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve +Dec 03, 2024 5:37:40 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve SEVERE: Cannot resolve dependencies in /build/reproducible-path/cdk-2.9/pom.xml: Dependency not found org.openscience.cdk:cdk-build-utils:jar:debian > dpkg --search /usr/share/maven-repo/jgrapht/jgrapht/*/* Found /usr/share/maven-repo/jgrapht/jgrapht/debian/jgrapht-debian.pom in libjgrapht0.6-java @@ -7102,7 +7138,7 @@ [error] Package libjgrapht0.6-java (0.6.0) is already installed and contains a possible match, but I cannot resolve library jgrapht:jgrapht:jar:debian in it. [error] Please check manually that the library is up to date, otherwise it may be necessary to package version debian in Debian. -Dec 03, 2024 5:22:25 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve +Dec 03, 2024 5:37:59 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve SEVERE: Cannot resolve dependencies in /build/reproducible-path/cdk-2.9/legacy/pom.xml: Dependency not found jgrapht:jgrapht:jar:debian ERROR: pom.xml: plugin is not packaged in the Maven repository for Debian: com.googlecode.maven-java-formatter-plugin:maven-java-formatter-plugin:0.4 @@ -7133,12 +7169,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/31534/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/23178 and its subdirectories -I: Current time: Tue Dec 3 05:22:43 -12 2024 -I: pbuilder-time-stamp: 1733246563 +I: removing directory /srv/workspace/pbuilder/31534 and its subdirectories +I: Current time: Wed Dec 4 07:38:38 +14 2024 +I: pbuilder-time-stamp: 1733247518