Diff of the two buildlogs: -- --- b1/build.log 2024-12-16 13:59:38.031322705 +0000 +++ b2/build.log 2024-12-16 14:02:18.168075697 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jan 18 08:18:17 -12 2026 -I: pbuilder-time-stamp: 1768767497 +I: Current time: Tue Dec 17 03:59:41 +14 2024 +I: pbuilder-time-stamp: 1734357581 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -31,52 +31,84 @@ dpkg-source: info: applying python-3.12.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/175012/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 16 13:59 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='d3897abe4e1546589a77f4df01400572' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='175012' - PS1='# ' - PS2='> ' + INVOCATION_ID=f15fab71ef124f1ab2643b90745b7ea0 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3226943 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7YXvdndw/pbuilderrc_DzkE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7YXvdndw/b1 --logfile b1/build.log python-sqt_0.8.0-8.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7YXvdndw/pbuilderrc_ZXYN --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7YXvdndw/b2 --logfile b2/build.log python-sqt_0.8.0-8.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/175012/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -312,7 +344,7 @@ Get: 180 http://deb.debian.org/debian unstable/main arm64 python3-pysam arm64 0.22.1+ds-2+b3 [3903 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.4-1 [250 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 python3-seaborn all 0.13.2-4 [215 kB] -Fetched 130 MB in 1s (154 MB/s) +Fetched 130 MB in 1s (201 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package pigz. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20082 files and directories currently installed.) @@ -911,8 +943,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Jan 18 20:19:15 UTC 2026. -Universal Time is now: Sun Jan 18 20:19:15 UTC 2026. +Local time is now: Mon Dec 16 14:00:15 UTC 2024. +Universal Time is now: Mon Dec 16 14:00:15 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -1074,7 +1106,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-sqt-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-sqt_0.8.0-8_source.changes +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-sqt-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-sqt_0.8.0-8_source.changes dpkg-buildpackage: info: source package python-sqt dpkg-buildpackage: info: source version 0.8.0-8 dpkg-buildpackage: info: source distribution unstable @@ -1320,7 +1356,7 @@ tests/testmedian.py . [ 97%] tests/testregion.py . [100%] -============================== 45 passed in 8.24s ============================== +============================== 45 passed in 5.20s ============================== I: pybuild base:311: cd /build/reproducible-path/python-sqt-0.8.0/.pybuild/cpython3_3.12_sqt/build; python3.12 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.12.8, pytest-8.3.4, pluggy-1.5.0 @@ -1339,8 +1375,8 @@ tests/testmedian.py . [ 97%] tests/testregion.py . [100%] -============================== 45 passed in 9.10s ============================== - rm -fr -- /tmp/dh-xdg-rundir-RxbgtdwG +============================== 45 passed in 6.01s ============================== + rm -fr -- /tmp/dh-xdg-rundir-Lu_a1kU8 make[1]: Leaving directory '/build/reproducible-path/python-sqt-0.8.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild @@ -1715,7 +1751,7 @@ D: dh_python3 fs:50: moving files from debian/python3-sqt/usr/lib/python3.12/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/ D: dh_python3 fs:50: moving files from debian/python3-sqt/usr/lib/python3.13/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache -D: dh_python3 fs:338: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12'), Version('3.13')}, 'ext_no_version': set()} +D: dh_python3 fs:338: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13'), Version('3.12')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-sqt D: dh_python3 pydist:175: trying to find dependency for cutadapt (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed @@ -1732,7 +1768,7 @@ D: dh_python3 pydist:175: trying to find dependency for xopen (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps -D: dh_python3 depends:253: D={'python3-xopen', 'python3 (>= 3.12~)', 'python3-matplotlib', 'python3-seaborn', 'python3-cutadapt', 'python3-pysam', 'python3:any', 'python3 (<< 3.14)'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:253: D={'python3 (>= 3.12~)', 'python3-matplotlib', 'python3-cutadapt', 'python3 (<< 3.14)', 'python3:any', 'python3-pysam', 'python3-xopen', 'python3-seaborn'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild @@ -1757,16 +1793,16 @@ objcopy --compress-debug-sections debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug chmod 0644 -- debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug dh_strip -a -O--buildsystem=pybuild - install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3 - objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3/b505afed98210a784a19fee6d0e7d1166be606.debug - chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3/b505afed98210a784a19fee6d0e7d1166be606.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3/b505afed98210a784a19fee6d0e7d1166be606.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/03/3510c105c687effb25b373277eecab535af61a.debug chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/03/3510c105c687effb25b373277eecab535af61a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/03/3510c105c687effb25b373277eecab535af61a.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so + install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3 + objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3/b505afed98210a784a19fee6d0e7d1166be606.debug + chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3/b505afed98210a784a19fee6d0e7d1166be606.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so + objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/a3/b505afed98210a784a19fee6d0e7d1166be606.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-sqt/usr/lib/debug/.dwz @@ -1778,7 +1814,7 @@ rm -f debian/python3-sqt/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/python3-sqt/DEBIAN - dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so + dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect @@ -1820,12 +1856,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3226943/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/175012 and its subdirectories -I: Current time: Sun Jan 18 08:22:36 -12 2026 -I: pbuilder-time-stamp: 1768767756 +I: removing directory /srv/workspace/pbuilder/3226943 and its subdirectories +I: Current time: Tue Dec 17 04:02:15 +14 2024 +I: pbuilder-time-stamp: 1734357735