Diff of the two buildlogs: -- --- b1/build.log 2024-05-09 23:13:41.262582802 +0000 +++ b2/build.log 2024-05-10 02:16:35.774870538 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jun 11 17:04:33 -12 2025 -I: pbuilder-time-stamp: 1749704673 +I: Current time: Fri May 10 13:13:45 +14 2024 +I: pbuilder-time-stamp: 1715296425 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -37,52 +37,84 @@ dpkg-source: info: applying CVE-2024-23346_JonesFaithfulTransformation_sympy-c231cbd.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1494008/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 9 23:13 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='6a8bf7230a364588b205c3fe2a47610e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1494008' - PS1='# ' - PS2='> ' + INVOCATION_ID=bacb3a06a7d54868bcd6a09560bfa010 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1023058 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NZRQReip/pbuilderrc_anwq --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NZRQReip/b1 --logfile b1/build.log pymatgen_2024.1.27+dfsg1-7.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NZRQReip/pbuilderrc_elM1 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NZRQReip/b2 --logfile b2/build.log pymatgen_2024.1.27+dfsg1-7.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink01-arm64 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Jun 11 14:05 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1494008/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 9 07:42 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -565,7 +597,7 @@ Get: 369 http://deb.debian.org/debian unstable/main arm64 python3-tqdm all 4.66.4-1 [90.8 kB] Get: 370 http://deb.debian.org/debian unstable/main arm64 python3-uncertainties all 3.1.7-2 [77.7 kB] Get: 371 http://deb.debian.org/debian unstable/main arm64 python3-vtk9 arm64 9.1.0+really9.1.0+dfsg2-8 [6602 kB] -Fetched 481 MB in 5s (90.0 MB/s) +Fetched 481 MB in 7s (69.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19744 files and directories currently installed.) @@ -1747,8 +1779,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Jun 12 05:05:30 UTC 2025. -Universal Time is now: Thu Jun 12 05:05:30 UTC 2025. +Local time is now: Thu May 9 23:16:03 UTC 2024. +Universal Time is now: Thu May 9 23:16:03 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -2123,7 +2155,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/pymatgen-2024.1.27+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pymatgen_2024.1.27+dfsg1-7_source.changes +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/pymatgen-2024.1.27+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pymatgen_2024.1.27+dfsg1-7_source.changes dpkg-buildpackage: info: source package pymatgen dpkg-buildpackage: info: source version 2024.1.27+dfsg1-7 dpkg-buildpackage: info: source distribution unstable @@ -3234,7 +3270,7 @@ Copying pymatgen.egg-info to build/bdist.linux-aarch64/wheel/pymatgen-2024.1.27.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/pymatgen-2024.1.27.dist-info/WHEEL -creating '/build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.12_pymatgen/.tmp-wlw2t8i1/pymatgen-2024.1.27-cp312-cp312-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it +creating '/build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.12_pymatgen/.tmp-3us6wnpj/pymatgen-2024.1.27-cp312-cp312-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'pymatgen/alchemy/__init__.py' adding 'pymatgen/alchemy/filters.py' adding 'pymatgen/alchemy/materials.py' @@ -4768,7 +4804,7 @@ Copying pymatgen.egg-info to build/bdist.linux-aarch64/wheel/pymatgen-2024.1.27.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/pymatgen-2024.1.27.dist-info/WHEEL -creating '/build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/.tmp-ihikgip0/pymatgen-2024.1.27-cp311-cp311-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it +creating '/build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/.tmp-6aahduxb/pymatgen-2024.1.27-cp311-cp311-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'pymatgen/alchemy/__init__.py' adding 'pymatgen/alchemy/filters.py' adding 'pymatgen/alchemy/materials.py' @@ -5225,7 +5261,7 @@ writing output... building [html]: targets for 47 source files that are out of date updating environment: [new config] 47 added, 0 changed, 0 removed -reading sources... [ 2%] index reading sources... [ 4%] modules reading sources... [ 6%] pymatgen reading sources... [ 9%] pymatgen.alchemy reading sources... [ 11%] pymatgen.analysis Matplotlib created a temporary config/cache directory at /tmp/matplotlib-e4ujn2fi because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +reading sources... [ 2%] index reading sources... [ 4%] modules reading sources... [ 6%] pymatgen reading sources... [ 9%] pymatgen.alchemy reading sources... [ 11%] pymatgen.analysis Matplotlib created a temporary config/cache directory at /tmp/matplotlib-hjygfaxr because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. /usr/lib/python3.11/importlib/__init__.py:126: FutureWarning: The substrate_analyzer module is being moved to the interfaces submodule in analysis. These imports will break in Pymatgen 2023 return _bootstrap._gcd_import(name[level:], package, level) reading sources... [ 13%] pymatgen.analysis.chemenv reading sources... [ 15%] pymatgen.analysis.chemenv.connectivity reading sources... [ 17%] pymatgen.analysis.chemenv.coordination_environments reading sources... [ 19%] pymatgen.analysis.chemenv.coordination_environments.coordination_geometries_files reading sources... [ 21%] pymatgen.analysis.chemenv.utils reading sources... [ 23%] pymatgen.analysis.diffraction reading sources... [ 26%] pymatgen.analysis.elasticity reading sources... [ 28%] pymatgen.analysis.ferroelectricity reading sources... [ 30%] pymatgen.analysis.gb reading sources... [ 32%] pymatgen.analysis.interfaces reading sources... [ 34%] pymatgen.analysis.magnetism reading sources... [ 36%] pymatgen.analysis.solar reading sources... [ 38%] pymatgen.analysis.structure_prediction reading sources... [ 40%] pymatgen.analysis.topological reading sources... [ 43%] pymatgen.analysis.xas reading sources... [ 45%] pymatgen.apps reading sources... [ 47%] pymatgen.apps.battery reading sources... [ 49%] pymatgen.apps.borg reading sources... [ 51%] pymatgen.cli reading sources... [ 53%] pymatgen.command_line reading sources... [ 55%] pymatgen.core reading sources... [ 57%] pymatgen.electronic_structure reading sources... [ 60%] pymatgen.entries reading sources... [ 62%] pymatgen.ext reading sources... [ 64%] pymatgen.io reading sources... [ 66%] pymatgen.io.abinit reading sources... [ 68%] pymatgen.io.aims reading sources... [ 70%] pymatgen.io.cp2k reading sources... [ 72%] pymatgen.io.exciting reading sources... [ 74%] pymatgen.io.feff reading sources... [ 77%] pymatgen.io.lammps reading sources... [ 79%] pymatgen.io.lobster reading sources... [ 81%] pymatgen.io.pwmat reading sources... [ 83%] pymatgen.io.qchem reading sources... [ 85%] pymatgen.io.vasp reading sources... [ 87%] pymatgen.io.xtb reading sources... [ 89%] pymatgen.optimization reading sources... [ 91%] pymatgen.phonon reading sources... [ 94%] pymatgen.symmetry reading sources... [ 96%] pymatgen.transformations reading sources... [ 98%] pymatgen.util reading sources... [100%] pymatgen.vis @@ -5414,8 +5450,8 @@ /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units.unitized:14: ERROR: Unexpected indentation. -WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.name: is not a callable object -WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.type: is not a callable object +WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.name: is not a callable object +WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.type: is not a callable object /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/core/libxcfunc.py:docstring of pymatgen.core.libxcfunc.LibxcFunc.all_kinds:1: ERROR: Unknown target name: "xc". /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/core/xcfunc.py:docstring of pymatgen.core.xcfunc.XcFunc:29: ERROR: Unknown target name: "xc". /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:9: ERROR: Unexpected indentation. @@ -5518,13 +5554,13 @@ /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/abinit/abiobjects.py:docstring of pymatgen.io.abinit.abiobjects.structure_from_abivars:14: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/abinit/abitimer.py:docstring of pymatgen.io.abinit.abitimer.AbinitTimerParser:10: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ShiftMode:6: ERROR: Unexpected indentation. -WARNING: Failed to get a method signature for pymatgen.io.abinit.netcdf.EtsfReader.chemical_symbols: is not a callable object -WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_core_density: is not a callable object -WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_partial_waves: is not a callable object -WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.projector_functions: is not a callable object -WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.pseudo_core_density: is not a callable object -WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.root: is not a callable object -WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.Pseudo.md5: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.netcdf.EtsfReader.chemical_symbols: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_core_density: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_partial_waves: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.projector_functions: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.pseudo_core_density: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.root: is not a callable object +WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.Pseudo.md5: is not a callable object /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.gth_header:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:6: WARNING: Block quote ends without a blank line; unexpected unindent. @@ -5845,7 +5881,7 @@ /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder.cder_imag:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.Waveder.cder_imag, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder.cder_real:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.Waveder.cder_real, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.MVLSlabSet.kpoints_updates:5: WARNING: Definition list ends without a blank line; unexpected unindent. -WARNING: Failed to get a method signature for pymatgen.phonon.dos.PhononDos.ind_zero_freq: is not a callable object +WARNING: Failed to get a method signature for pymatgen.phonon.dos.PhononDos.ind_zero_freq: is not a callable object /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/phonon/ir_spectra.py:docstring of pymatgen.phonon.ir_spectra.IRDielectricTensor:1: ERROR: Unknown interpreted text role "cite". /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/phonon/ir_spectra.py:docstring of pymatgen.phonon.ir_spectra.IRDielectricTensor:5: ERROR: Unknown interpreted text role "cite". /build/reproducible-path/pymatgen-2024.1.27+dfsg1/.pybuild/cpython3_3.11_pymatgen/build/pymatgen/phonon/plotter.py:docstring of pymatgen.phonon.plotter.PhononDosPlotter:4: ERROR: Unexpected indentation. @@ -6232,36 +6268,36 @@ .pybuild/test_python3.11/tests/vis/test_plotters.py ... [100%] ============================= slowest 30 durations ============================= -45.31s call .pybuild/test_python3.11/tests/analysis/test_structure_analyzer.py::TestMiscFunction::test_average_coordination_number -44.78s call .pybuild/test_python3.11/tests/io/test_babel.py::TestBabelMolAdaptor::test_rotor_search_rrs -44.28s call .pybuild/test_python3.11/tests/electronic_structure/test_plotter.py::TestBSPlotterProjected::test_methods -31.62s call .pybuild/test_python3.11/tests/symmetry/test_kpath_lm.py::TestKPathLatimerMunro::test_kpath_generation -31.14s call .pybuild/test_python3.11/tests/analysis/test_fragmenter.py::TestFragmentMolecule::test_pc_then_ec_depth_10 -26.04s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_plot -23.35s call .pybuild/test_python3.11/tests/io/vasp/test_outputs.py::TestVasprun::test_runtype -21.35s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_acoustic_debye_temp -20.98s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_as_from_dict -19.93s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_tdos -19.26s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_thermal_conductivity_slack -18.93s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_average_gruneisen -18.65s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_debye_temp_phonopy -18.58s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_frequencies -18.53s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_multi -18.44s call .pybuild/test_python3.11/tests/io/test_phonopy.py::TestGruneisen::test_gruneisen_parameter -18.33s call .pybuild/test_python3.11/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_get_yield_stress -18.22s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_phdos -17.97s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_gruneisen -17.63s call .pybuild/test_python3.11/tests/io/vasp/test_optics.py::TestVasprun::test_optics -16.43s call .pybuild/test_python3.11/tests/core/test_surface.py::MillerIndexFinderTests::test_generate_all_slabs -14.92s call .pybuild/test_python3.11/tests/analysis/test_prototypes.py::TestAflowPrototypeMatcher::test_prototype_matching -12.58s call .pybuild/test_python3.11/tests/core/test_surface.py::TestSlab::test_symmetrization -12.19s call .pybuild/test_python3.11/tests/io/test_packmol.py::TestPackmolSet::test_chdir_behavior -12.02s call .pybuild/test_python3.11/tests/test_cli.py::test_pmg_structure -11.62s call .pybuild/test_python3.11/tests/core/test_trajectory.py::TestTrajectory::test_extend -11.60s call .pybuild/test_python3.11/tests/core/test_trajectory.py::TestTrajectory::test_xdatcar_write -11.54s call .pybuild/test_python3.11/tests/core/test_trajectory.py::TestTrajectory::test_conversion -11.47s call .pybuild/test_python3.11/tests/analysis/topological/test_spillage.py::TestSolar::test_spillage_from_vasprun -11.28s call .pybuild/test_python3.11/tests/io/qchem/test_outputs.py::TestQCOutput::test_nbo7_infinite_e2pert +6944.32s call .pybuild/test_python3.11/tests/io/test_babel.py::TestBabelMolAdaptor::test_rotor_search_rrs +653.31s call .pybuild/test_python3.11/tests/io/test_babel.py::TestBabelMolAdaptor::test_rotor_search_wrs +85.34s call .pybuild/test_python3.11/tests/io/test_babel.py::TestBabelMolAdaptor::test_rotor_search_srs +78.79s call .pybuild/test_python3.11/tests/electronic_structure/test_plotter.py::TestBSPlotterProjected::test_methods +62.22s call .pybuild/test_python3.11/tests/symmetry/test_kpath_lm.py::TestKPathLatimerMunro::test_kpath_generation +61.47s call .pybuild/test_python3.11/tests/analysis/test_structure_analyzer.py::TestMiscFunction::test_average_coordination_number +52.70s call .pybuild/test_python3.11/tests/analysis/test_fragmenter.py::TestFragmentMolecule::test_pc_then_ec_depth_10 +50.15s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_plot +40.37s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_frequencies +38.82s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_debye_temp_phonopy +37.27s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_thermal_conductivity_slack +36.46s call .pybuild/test_python3.11/tests/io/vasp/test_outputs.py::TestVasprun::test_runtype +34.48s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_acoustic_debye_temp +34.45s call .pybuild/test_python3.11/tests/io/test_babel.py::TestBabelMolAdaptor::test_confab_conformers +33.75s call .pybuild/test_python3.11/tests/io/test_babel.py::TestBabelMolAdaptor::test_make3d +31.01s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_phdos +30.51s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_average_gruneisen +30.44s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_gruneisen +29.86s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_tdos +29.16s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_as_from_dict +28.77s call .pybuild/test_python3.11/tests/test_cli.py::test_pmg_structure +27.90s call .pybuild/test_python3.11/tests/io/test_phonopy.py::TestGruneisen::test_gruneisen_parameter +27.53s call .pybuild/test_python3.11/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_multi +26.85s call .pybuild/test_python3.11/tests/core/test_surface.py::TestSlab::test_symmetrization +25.89s call .pybuild/test_python3.11/tests/io/lobster/test_lobsterenv.py::TestLobsterNeighbors::test_get_info_cohps_to_neighbors +25.39s call .pybuild/test_python3.11/tests/io/vasp/test_optics.py::TestVasprun::test_optics +24.86s call .pybuild/test_python3.11/tests/symmetry/test_kpath_sc.py::TestBandStructureSC::test_kpath_generation +23.75s call .pybuild/test_python3.11/tests/analysis/test_prototypes.py::TestAflowPrototypeMatcher::test_prototype_matching +22.86s call .pybuild/test_python3.11/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_get_yield_stress +21.56s call .pybuild/test_python3.11/tests/electronic_structure/test_plotter.py::TestBSPlotter::test_get_plot =========================== short test summary info ============================ SKIPPED [1] .pybuild/test_python3.11/tests/io/test_shengbte.py:11: could not import 'f90nml': No module named 'f90nml' SKIPPED [1] .pybuild/test_python3.11/tests/analysis/magnetism/test_analyzer.py:247: enumlib not present @@ -6416,7 +6452,7 @@ SKIPPED [1] .pybuild/test_python3.11/tests/transformations/test_standard_transformations.py:248: enum_lib not present. SKIPPED [1] .pybuild/test_python3.11/tests/util/test_graph_hashing.py:44: could not import 'emmet.core.graph_hashing': No module named 'emmet' SKIPPED [1] .pybuild/test_python3.11/tests/util/test_graph_hashing.py:61: could not import 'emmet.core.graph_hashing': No module named 'emmet' -======== 2332 passed, 153 skipped, 308 deselected in 1428.56s (0:23:48) ======== +======= 2332 passed, 153 skipped, 308 deselected in 10085.00s (2:48:04) ======== ..tot conformations = 3 ..tot confs tested = 3 ..below energy threshold = 3 @@ -6450,8 +6486,8 @@ dpkg-gencontrol: warning: package python-pymatgen-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python3-pymatgen' in '../python3-pymatgen_2024.1.27+dfsg1-7_arm64.deb'. dpkg-deb: building package 'python3-pymatgen-dbgsym' in '../python3-pymatgen-dbgsym_2024.1.27+dfsg1-7_arm64.deb'. +dpkg-deb: building package 'python3-pymatgen' in '../python3-pymatgen_2024.1.27+dfsg1-7_arm64.deb'. dpkg-deb: building package 'python-pymatgen-doc' in '../python-pymatgen-doc_2024.1.27+dfsg1-7_all.deb'. dpkg-genbuildinfo --build=binary -O../pymatgen_2024.1.27+dfsg1-7_arm64.buildinfo dpkg-genchanges --build=binary -O../pymatgen_2024.1.27+dfsg1-7_arm64.changes @@ -6461,12 +6497,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1023058/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1494008 and its subdirectories -I: Current time: Wed Jun 11 17:36:39 -12 2025 -I: pbuilder-time-stamp: 1749706599 +I: removing directory /srv/workspace/pbuilder/1023058 and its subdirectories +I: Current time: Fri May 10 16:16:34 +14 2024 +I: pbuilder-time-stamp: 1715307394