Diff of the two buildlogs: -- --- b1/build.log 2024-05-15 07:37:44.041891624 +0000 +++ b2/build.log 2024-05-15 07:40:23.539104296 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Jun 17 01:57:57 -12 2025 -I: pbuilder-time-stamp: 1750168677 +I: Current time: Wed Jun 18 04:00:48 +14 2025 +I: pbuilder-time-stamp: 1750168848 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying cstdint.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1785343/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/D01_modify_environment starting +debug: Running on codethink01-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 17 14:00 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='0d3e8a9702b14c78a17141927ef01a18' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1785343' - PS1='# ' - PS2='> ' + INVOCATION_ID=2360b420a3d547708f911a861da68655 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=748232 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rXVpPerc/pbuilderrc_03gN --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rXVpPerc/b1 --logfile b1/build.log metaeuk_6-a5d39d9+ds-5.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rXVpPerc/pbuilderrc_uFUl --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rXVpPerc/b2 --logfile b2/build.log metaeuk_6-a5d39d9+ds-5.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Jun 15 14:06 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1785343/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Jun 15 14:05 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -190,7 +222,7 @@ Get: 60 http://deb.debian.org/debian unstable/main arm64 libsimde-dev all 0.8.2-1 [465 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libxxhash-dev arm64 0.8.2-2+b1 [81.3 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.5+dfsg2-2 [323 kB] -Fetched 34.4 MB in 0s (105 MB/s) +Fetched 34.4 MB in 0s (86.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19744 files and directories currently installed.) @@ -453,7 +485,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../metaeuk_6-a5d39d9+ds-5_source.changes +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../metaeuk_6-a5d39d9+ds-5_source.changes dpkg-buildpackage: info: source package metaeuk dpkg-buildpackage: info: source version 6-a5d39d9+ds-5 dpkg-buildpackage: info: source distribution unstable @@ -543,7 +579,7 @@ -- Found OpenMP -- xxd not found, using xxdi.pl instead -- ShellCheck not found --- Configuring done (3.3s) +-- Configuring done (3.7s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -567,142 +603,145 @@ make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' make -f lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/build.make lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/depend +make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-6-a5d39d9+ds /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake "--color=" make 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'/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-6-a5d39d9+ds /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/ksw2 /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/DependInfo.cmake "--color=" +make -f lib/mmseqs/data/CMakeFiles/generated.dir/build.make lib/mmseqs/data/CMakeFiles/generated.dir/depend +[ 0%] Building C object lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/microtar.c.o +[ 0%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cc 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'/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -[ 0%] Generating ../generated/VTML80.out.h +[ 3%] Building CXX object lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -make -f lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/build.make lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/build +make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/build +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/ksw2 && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp 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-I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o -MF CMakeFiles/cacode.dir/lubksb.cpp.o.d -o CMakeFiles/cacode.dir/lubksb.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/lubksb.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprob.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprob.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogprob.cpp -[ 2%] Building CXX object lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true VTML40.out -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp +[ 4%] Generating ../generated/predictexons.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/ksw2 && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -MD -MT lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -MF CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o.d -o CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2/ksw2_extz2_sse.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o -MF CMakeFiles/cacode.dir/ludcmp.cpp.o.d -o CMakeFiles/cacode.dir/ludcmp.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/ludcmp.cpp -make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/build -make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h -make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -MF CMakeFiles/cacode.dir/nrutil.cpp.o.d -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/nrutil.cpp -[ 2%] Building C object lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o -[ 2%] Building CXX object src/version/CMakeFiles/version.dir/Version.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cc -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ansi -Wall -Wshadow -fPIC -O3 -fsigned-char -MD -MT lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o -MF CMakeFiles/tinyexpr.dir/tinyexpr.c.o.d -o CMakeFiles/tinyexpr.dir/tinyexpr.c.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/c++ -DGIT_SHA1=6-a5d39d9+ds-5 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/version/Version.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp -[ 3%] Generating ../generated/predictexons.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true predictexons.sh +[ 4%] Building CXX object src/version/CMakeFiles/version.dir/Version.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/c++ -DGIT_SHA1=6-a5d39d9+ds-5 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/version/Version.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl VTML80.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h +[ 4%] Building C object lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cc -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ansi -Wall -Wshadow -fPIC -O3 -fsigned-char -MD -MT lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o -MF CMakeFiles/tinyexpr.dir/tinyexpr.c.o.d -o CMakeFiles/tinyexpr.dir/tinyexpr.c.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl predictexons.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h -[ 3%] Generating ../generated/nucleotide.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out +[ 4%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -MF CMakeFiles/cacode.dir/nrutil.cpp.o.d -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode/nrutil.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp +[ 5%] Linking CXX static library libversion.a cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/predictexons.sh.h -[ 3%] Generating ../generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -[ 3%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o -MF CMakeFiles/alp.dir/njn_random.cpp.o.d -o CMakeFiles/alp.dir/njn_random.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_random.cpp -[ 4%] Linking CXX static library libversion.a cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake -[ 4%] Generating ../generated/easypredict.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML80.out.h +[ 5%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstat.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstat.cpp +[ 5%] Generating ../generated/easypredict.sh.h +[ 5%] Generating ../generated/VTML40.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true VTML40.out cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easypredict.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h -[ 5%] Linking C static library libmicrotar.a -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h +[ 6%] Linking C static library libmicrotar.a cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -[ 6%] Generating ../generated/PAM30.out.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true PAM30.out -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h /usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o -[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogprobproto.cpp +[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/easypredict.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 /usr/bin/ranlib libversion.a -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/VTML40.out.h +[ 7%] Generating ../generated/taxtocontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh /usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o -[ 8%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h -/usr/bin/ranlib libmicrotar.a -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib -[ 8%] Generating ../generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp -[ 8%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 8%] Built target version -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstat.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstat.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp +/usr/bin/ranlib libmicrotar.a +[ 7%] Generating ../generated/nucleotide.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h +[ 7%] Built target version +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h +[ 7%] Built target microtar +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp +[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h +[ 7%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h +[ 7%] Generating ../generated/blosum62.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out +[ 7%] Built target local-generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 8%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h +[ 9%] Generating ../generated/PAM30.out.h +[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c: In function ‘base’: +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true PAM30.out /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:373:16: warning: array subscript ‘te_expr[0]’ is partly outside array bounds of ‘unsigned char[16]’ [-Warray-bounds=] 373 | ret->bound = s->bound; | ^~ @@ -737,257 +776,254 @@ /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:88:20: note: object of size 16 allocated by ‘malloc’ 88 | te_expr *ret = malloc(size); | ^~~~~~~~~~~~ -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp -[ 9%] Built target microtar -[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp -[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -[ 9%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blosum62.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp +[ 10%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h +[ 11%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h -[ 9%] Built target local-generated +[ 11%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h -[ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp -[ 10%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib -[ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 12%] Linking C static library libtinyexpr.a +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 +[ 12%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h +/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +/usr/bin/ranlib libtinyexpr.a cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl ExpOpt3_8_polished.cs32.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp +[ 12%] Built target tinyexpr +[ 12%] Built target cacode +[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h -[ 10%] Generating ../generated/Library255_may17.lib.h +[ 12%] Generating ../generated/Library255_may17.lib.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true Library255_may17.lib +[ 12%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 11%] Generating ../generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl Library255_may17.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +[ 13%] Generating ../generated/libPolished_8.lib.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl libPolished_8.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h -[ 12%] Linking C static library libtinyexpr.a cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake -[ 12%] Generating ../generated/krona_prelude.html.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true krona_prelude.html -[ 12%] Generating ../generated/cs219.lib.h +[ 13%] Generating ../generated/cs219.lib.h +[ 14%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_basic.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true cs219.lib +[ 14%] Generating ../generated/krona_prelude.html.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true krona_prelude.html cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl cs219.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl cs219.lib > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl krona_prelude.html > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp -/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cs219.lib.h -/usr/bin/ranlib libtinyexpr.a -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp -[ 12%] Generating ../generated/result_viz_prelude.html.zst.h +[ 14%] Generating ../generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true result_viz_prelude.html.zst -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -[ 12%] Built target tinyexpr cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +[ 14%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl result_viz_prelude.html.zst > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h -[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -[ 13%] Built target cacode -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp -[ 14%] Generating ../generated/K4000.crf.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp +[ 15%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp +[ 16%] Generating ../generated/K4000.crf.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true K4000.crf cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 15%] Generating ../generated/easysearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easysearch.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl K4000.crf > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h +[ 17%] Generating ../generated/easysearch.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easysearch.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easysearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h -[ 15%] Generating ../generated/easycluster.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easycluster.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h +[ 17%] Generating ../generated/easycluster.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easycluster.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easycluster.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp -[ 15%] Generating ../generated/easytaxonomy.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h +[ 17%] Generating ../generated/easytaxonomy.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easytaxonomy.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 15%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easytaxonomy.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h -[ 15%] Generating ../generated/easyrbh.sh.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp +[ 17%] Built target ksw2 +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h +[ 17%] Generating ../generated/easyrbh.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true easyrbh.sh -[ 15%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl easyrbh.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -[ 15%] Generating ../generated/blastp.sh.h +[ 17%] Generating ../generated/blastp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastp.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 16%] Generating ../generated/blastpgp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastpgp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h +[ 18%] Generating ../generated/blastpgp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h -[ 16%] Generating ../generated/map.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 18%] Generating ../generated/map.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true map.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastpgp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 16%] Generating ../generated/rbh.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true rbh.sh -[ 17%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl map.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_basic.cpp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp -[ 17%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/map.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl rbh.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h -[ 17%] Generating ../generated/linclust.sh.h +[ 18%] Generating ../generated/rbh.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true rbh.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 18%] Generating ../generated/linclust.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true linclust.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl rbh.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl linclust.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp -[ 17%] Generating ../generated/clustering.sh.h +[ 18%] Generating ../generated/clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true clustering.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/rbh.sh.h +[ 19%] Generating ../generated/cascaded_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true cascaded_clustering.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linclust.sh.h -[ 18%] Generating ../generated/cascaded_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true cascaded_clustering.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl cascaded_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp +[ 19%] Generating ../generated/update_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h -[ 18%] Generating ../generated/update_clustering.sh.h +[ 19%] Generating ../generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true update_clustering.sh -[ 18%] Generating ../generated/searchtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true searchtargetprofile.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl update_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -make[3]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl update_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl searchtargetprofile.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h -[ 18%] Built target ksw2 +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h -[ 19%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o [ 19%] Generating ../generated/createindex.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true createindex.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -[ 20%] Generating ../generated/createtaxdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl createindex.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h +[ 20%] Generating ../generated/createtaxdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true createtaxdb.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h [ 20%] Generating ../generated/translated_search.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true translated_search.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl createtaxdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl createtaxdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl translated_search.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h -[ 20%] Generating ../generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createindex.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h +[ 20%] Generating ../generated/taxpercontig.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxpercontig.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp +[ 20%] Generating ../generated/multihitdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxpercontig.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp -[ 20%] Generating ../generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h [ 21%] Generating ../generated/multihitsearch.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true multihitsearch.sh [ 22%] Generating ../generated/enrich.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true enrich.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true multihitsearch.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl multihitsearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h [ 23%] Generating ../generated/blastn.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true blastn.sh -[ 24%] Generating ../generated/searchslicedtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/enrich.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 24%] Generating ../generated/searchslicedtargetprofile.sh.h [ 25%] Generating ../generated/taxonomy.sh.h -[ 26%] Generating ../generated/linsearch.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true taxonomy.sh +[ 26%] Generating ../generated/linsearch.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastn.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true linsearch.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl blastn.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl taxonomy.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl linsearch.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/blastn.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h [ 27%] Generating ../generated/databases.sh.h -[ 28%] Generating ../generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true databases.sh +[ 28%] Generating ../generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide_clustering.sh -[ 28%] Generating ../generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated +[ 28%] Generating ../generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl nucleotide_clustering.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated [ 29%] Generating ../generated/tsv2exprofiledb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/checkshell.sh true tsv2exprofiledb.sh -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/databases.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/cmake/xxdi.pl tsv2exprofiledb.sh > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h > /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated/K4000.crf.h.tmp @@ -1003,28 +1039,28 @@ make -f lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/build.make lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/build make[3]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' [ 29%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Alignment.cpp.o -[ 30%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/CompressedA3M.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Alignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/alignment/Alignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/alignment/Alignment.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment/Alignment.cpp +[ 30%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/CompressedA3M.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/CompressedA3M.cpp.o -MF CMakeFiles/mmseqs-framework.dir/alignment/CompressedA3M.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/alignment/CompressedA3M.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment/CompressedA3M.cpp [ 30%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Main.cpp.o -[ 30%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/Matcher.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 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/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp [ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/Clustering.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering/Clustering.cpp @@ -1092,10 +1128,6 @@ cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/ExtendedSubstitutionMatrix.cpp [ 47%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/Indexer.cpp -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/IndexBuilder.cpp -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/KmerGenerator.cpp In file included from /usr/include/string.h:548, from /usr/include/c++/13/cstring:42, from /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons/Util.h:6, @@ -1109,6 +1141,10 @@ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 60 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/IndexBuilder.cpp +[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/KmerGenerator.cpp [ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering/Main.cpp [ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o @@ -1173,6 +1209,10 @@ cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/apply.cpp [ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/clusthash.cpp +[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/compress.cpp +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/convert2fasta.cpp In file included from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd/simd.h:9, from /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons/CSProfile.h:9, @@ -1185,6 +1225,8 @@ /usr/include/c++/13/bits/stl_algobase.h:931:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 931 | *__first = __tmp; | ~~~~~~~~~^~~~~~~ +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/convertalignments.cpp In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/13/bits/stl_algobase.h:977:21, inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/13/bits/stl_algobase.h:1007:20, @@ -1193,12 +1235,6 @@ /usr/include/c++/13/bits/stl_algobase.h:931:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 931 | *__first = __tmp; | ~~~~~~~~~^~~~~~~ -[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment 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-MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/compress.cpp -[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 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/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/convertca3m.cpp [ 63%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o @@ -1235,11 +1271,11 @@ cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit 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/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/expandaln.cpp:78:13: warning: ‘bool compareHitsByKeyScore(const Matcher::result_t&, const Matcher::result_t&)’ defined but not used [-Wunused-function] 78 | static bool compareHitsByKeyScore(const Matcher::result_t &first, const Matcher::result_t &second) { | ^~~~~~~~~~~~~~~~~~~~~ +[ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o +cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/touchdb.cpp [ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util/filterdb.cpp [ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/gff2db.cpp.o @@ -1346,10 +1382,10 @@ cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/workflow/EasyRbh.cpp [ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/workflow/EasyCluster.cpp -[ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/workflow/Enrich.cpp [ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o.d 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-fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/exonpredictor/groupstoacc.cpp.o -MF CMakeFiles/metaeuk.dir/exonpredictor/groupstoacc.cpp.o.d -o CMakeFiles/metaeuk.dir/exonpredictor/groupstoacc.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/exonpredictor/groupstoacc.cpp -[ 98%] Building CXX object src/CMakeFiles/metaeuk.dir/workflow/PredictExons.cpp.o cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib 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-DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering 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CMakeFiles/metaeuk.dir/workflow/EasyPredict.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/workflow/EasyPredict.cpp cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-6-a5d39d9+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-6-a5d39d9+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/metaeuk.cpp.o -MF CMakeFiles/metaeuk.dir/metaeuk.cpp.o.d -o CMakeFiles/metaeuk.dir/metaeuk.cpp.o -c /build/reproducible-path/metaeuk-6-a5d39d9+ds/src/metaeuk.cpp [100%] Linking CXX executable metaeuk cd /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/metaeuk.dir/link.txt --verbose=1 @@ -1406,7 +1442,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds/obj-aarch64-linux-gnu' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-_qyO9LCc + rm -fr -- /tmp/dh-xdg-rundir-Hc3wzevQ create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/metaeuk.substvars debian/metaeuk-examples.substvars @@ -1443,10 +1479,10 @@ install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples install -p -m0644 debian/copyright debian/metaeuk-examples/usr/share/doc/metaeuk-examples/copyright dh_installchangelogs - install -m0755 -d debian/metaeuk/usr/share/doc/metaeuk - install -p -m0644 debian/.debhelper/generated/metaeuk/dh_installchangelogs.dch.trimmed debian/metaeuk/usr/share/doc/metaeuk/changelog.Debian install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples install -p -m0644 debian/.debhelper/generated/metaeuk-examples/dh_installchangelogs.dch.trimmed debian/metaeuk-examples/usr/share/doc/metaeuk-examples/changelog.Debian + install -m0755 -d debian/metaeuk/usr/share/doc/metaeuk + install -p -m0644 debian/.debhelper/generated/metaeuk/dh_installchangelogs.dch.trimmed debian/metaeuk/usr/share/doc/metaeuk/changelog.Debian dh_perl dh_link dh_strip_nondeterminism @@ -1454,10 +1490,10 @@ cd debian/metaeuk cd debian/metaeuk-examples chmod a-x usr/share/doc/metaeuk/README.md usr/share/doc/metaeuk/changelog.Debian - chmod a-x usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh gzip -9nf usr/share/doc/metaeuk/README.md usr/share/doc/metaeuk/changelog.Debian - gzip -9nf usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh cd '/build/reproducible-path/metaeuk-6-a5d39d9+ds' + chmod a-x usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh + gzip -9nf usr/share/doc/metaeuk-examples/changelog.Debian usr/share/doc/metaeuk/example-data/DB.fasta usr/share/doc/metaeuk/example-data/QUERY.fasta usr/share/doc/metaeuk/example-data/VTML80.out usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiag.lib usr/share/doc/metaeuk/example-data/resources/CovSeqidQscPercMinDiagTargetCov.lib usr/share/doc/metaeuk/example-data/resources/ExpOpt3_8_polished.cs32.lib usr/share/doc/metaeuk/example-data/resources/K4000.crf usr/share/doc/metaeuk/example-data/resources/Library255_may17.lib usr/share/doc/metaeuk/example-data/resources/cs219.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_255.lib usr/share/doc/metaeuk/example-data/resources/libPure_blosum62_32.lib usr/share/doc/metaeuk/example-data/workflow/blastpgp.sh usr/share/doc/metaeuk/example-data/workflow/cascaded_clustering.sh usr/share/doc/metaeuk/example-data/workflow/createtaxdb.sh usr/share/doc/metaeuk/example-data/workflow/databases.sh usr/share/doc/metaeuk/example-data/workflow/enrich.sh usr/share/doc/metaeuk/example-data/workflow/linclust.sh usr/share/doc/metaeuk/example-data/workflow/nucleotide_clustering.sh usr/share/doc/metaeuk/example-data/workflow/searchslicedtargetprofile.sh usr/share/doc/metaeuk/example-data/workflow/taxpercontig.sh usr/share/doc/metaeuk/example-data/workflow/update_clustering.sh cd '/build/reproducible-path/metaeuk-6-a5d39d9+ds' dh_fixperms find debian/metaeuk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s @@ -1466,8 +1502,8 @@ find debian/metaeuk-examples/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk-examples/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/metaeuk-examples/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/metaeuk-examples -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/metaeuk-examples -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a @@ -1493,37 +1529,37 @@ debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.8.2-1), " + install -m0755 -d debian/metaeuk-examples/DEBIAN + echo misc:Depends= >> debian/metaeuk-examples.substvars + echo misc:Pre-Depends= >> debian/metaeuk-examples.substvars + dpkg-gencontrol -pmetaeuk-examples -ldebian/changelog -Tdebian/metaeuk-examples.substvars -cdebian/control -Pdebian/metaeuk-examples "-Vsimde:Built-Using=simde (= 0.8.2-1), " install -m0755 -d debian/metaeuk/DEBIAN echo misc:Depends= >> debian/metaeuk.substvars echo misc:Pre-Depends= >> debian/metaeuk.substvars install -m0755 -d debian/.debhelper/metaeuk/dbgsym-root/DEBIAN dpkg-gencontrol -pmetaeuk -ldebian/changelog -Tdebian/metaeuk.substvars -cdebian/control -Pdebian/.debhelper/metaeuk/dbgsym-root "-Vsimde:Built-Using=simde (= 0.8.2-1), " -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=metaeuk-dbgsym "-DDepends=metaeuk (= \${binary:Version})" "-DDescription=debug symbols for metaeuk" -DBuild-Ids=fb5be789403836328c462e769f761530a611aeb9 -DSection=debug -UMulti-Arch -UReplaces -UBreaks - install -m0755 -d debian/metaeuk-examples/DEBIAN - echo misc:Depends= >> debian/metaeuk-examples.substvars - echo misc:Pre-Depends= >> debian/metaeuk-examples.substvars - dpkg-gencontrol -pmetaeuk-examples -ldebian/changelog -Tdebian/metaeuk-examples.substvars -cdebian/control -Pdebian/metaeuk-examples "-Vsimde:Built-Using=simde (= 0.8.2-1), " + chmod 0644 -- debian/metaeuk-examples/DEBIAN/control chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pmetaeuk -ldebian/changelog -Tdebian/metaeuk.substvars -cdebian/control -Pdebian/metaeuk "-Vsimde:Built-Using=simde (= 0.8.2-1), " - chmod 0644 -- debian/metaeuk-examples/DEBIAN/control chmod 0644 -- debian/metaeuk/DEBIAN/control make[1]: Leaving directory '/build/reproducible-path/metaeuk-6-a5d39d9+ds' dh_md5sums install -m0755 -d debian/metaeuk/DEBIAN - cd debian/metaeuk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums install -m0755 -d debian/metaeuk-examples/DEBIAN + cd debian/metaeuk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/metaeuk-examples >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums chmod 0644 -- debian/metaeuk/DEBIAN/md5sums install -m0755 -d debian/.debhelper/metaeuk/dbgsym-root/DEBIAN cd debian/.debhelper/metaeuk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/metaeuk .. dpkg-deb --root-owner-group --build debian/.debhelper/metaeuk/dbgsym-root .. dpkg-deb --root-owner-group --build debian/metaeuk-examples .. +dpkg-deb: building package 'metaeuk' in '../metaeuk_6-a5d39d9+ds-5_arm64.deb'. dpkg-deb: building package 'metaeuk-dbgsym' in '../metaeuk-dbgsym_6-a5d39d9+ds-5_arm64.deb'. dpkg-deb: building package 'metaeuk-examples' in '../metaeuk-examples_6-a5d39d9+ds-5_all.deb'. -dpkg-deb: building package 'metaeuk' in '../metaeuk_6-a5d39d9+ds-5_arm64.deb'. dpkg-genbuildinfo --build=binary -O../metaeuk_6-a5d39d9+ds-5_arm64.buildinfo dpkg-genchanges --build=binary -O../metaeuk_6-a5d39d9+ds-5_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1531,12 +1567,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/748232/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1785343 and its subdirectories -I: Current time: Tue Jun 17 02:00:42 -12 2025 -I: pbuilder-time-stamp: 1750168842 +I: removing directory /srv/workspace/pbuilder/748232 and its subdirectories +I: Current time: Wed Jun 18 04:03:22 +14 2025 +I: pbuilder-time-stamp: 1750169002