Diff of the two buildlogs: -- --- b1/build.log 2024-12-02 21:58:50.853690448 +0000 +++ b2/build.log 2024-12-02 21:59:25.712126970 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 2 09:58:09 -12 2024 -I: pbuilder-time-stamp: 1733176689 +I: Current time: Tue Dec 3 11:58:53 +14 2024 +I: pbuilder-time-stamp: 1733176733 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -32,52 +32,84 @@ dpkg-source: info: applying gcc-14.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1054612/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 2 21:59 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='705402a875324e2ca2860f44b2a4581e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1054612' - PS1='# ' - PS2='> ' + INVOCATION_ID=8cb002ed2e1349cbb7785ca5285e1cf1 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=4133407 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.P4JlAwXJ/pbuilderrc_P9HH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.P4JlAwXJ/b1 --logfile b1/build.log lucy_1.20-5.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.P4JlAwXJ/pbuilderrc_hxiM --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.P4JlAwXJ/b2 --logfile b2/build.log lucy_1.20-5.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink02-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1054612/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -142,7 +174,7 @@ Get: 27 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] -Fetched 19.4 MB in 0s (101 MB/s) +Fetched 19.4 MB in 0s (134 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20087 files and directories currently installed.) @@ -273,7 +305,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/lucy-1.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lucy_1.20-5_source.changes +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/lucy-1.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lucy_1.20-5_source.changes dpkg-buildpackage: info: source package lucy dpkg-buildpackage: info: source version 1.20-5 dpkg-buildpackage: info: source distribution unstable @@ -316,6 +352,7 @@ 10 | /* qual_trim.c - Quality trimming algorithm which determines a "clean" qual_trim.c:11:1: warning: "/*" within comment [-Wcomment] 11 | /* range for a sequence based on its phred quality values. +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lucy-1.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o splice.o splice.c qual_trim.c:12:1: warning: "/*" within comment [-Wcomment] 12 | /* qual_trim.c:13:1: warning: "/*" within comment [-Wcomment] @@ -390,27 +427,8 @@ 47 | /* qual_trim.c:48:1: warning: "/*" within comment [-Wcomment] 48 | /**************************************************************************/ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lucy-1.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o splice.o splice.c -lucy.c: In function 'hashstring': -lucy.c:112:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] - 112 | if (g = value&0xF0000000) { - | ^ -lucy.c: In function 'worker': -lucy.c:173:10: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 173 | int id=(int)arg; - | ^ -lucy.c: In function 'main': -lucy.c:532:51: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] - 532 | if (pthread_create(&threads[i], NULL, worker, (void*)i)) - | ^ -lucy.c:793:15: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 793 | (i=(int)fgets(buf, BUFFER_LENGTH, spl_file)) && buf[0]!='>'; ) { - | ^ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lucy-1.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o poly.o poly.c abi.c: In function 'abi_align': -lucy.c:632:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 632 | fgets(buf, BUFFER_LENGTH, qul_file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ abi.c:196:18: warning: array subscript has type 'char' [-Wchar-subscripts] 196 | if (badness[a[i]][b[j]]) { | ~^~~ @@ -501,6 +519,20 @@ abi.c:342:36: warning: array subscript has type 'char' [-Wchar-subscripts] 342 | if ((count+=badness[a[l]][b[r]])=span && j>=width-max_i || j>height/2) + | ~~~~~~~~^~~~~~~~~~~~~~~~~ qual_trim.c:692:1: warning: "/*" within comment [-Wcomment] 692 | /* qual_trim.c: In function 'quality_trim': @@ -657,11 +814,6 @@ 831 | /* int num_windows, (number of windows) qual_trim.c:832:1: warning: "/*" within comment [-Wcomment] 832 | /* int *windows, (array of window sizes (largest to smallest)) -done! -vector.c: In function 'construct_vector_tags': -vector.c:86:34: warning: array subscript has type 'char' [-Wchar-subscripts] - 86 | accr|=tag_code(rev_code[seq[len-k%len-1]]); - | ~~~^~~~~~~~~~~~~ qual_trim.c:833:1: warning: "/*" within comment [-Wcomment] 833 | /* double *err_limits, (array of maximum allowed average probability) qual_trim.c:834:1: warning: "/*" within comment [-Wcomment] @@ -674,125 +826,9 @@ 837 | /* ( at each end of clean range) qual_trim.c:838:1: warning: "/*" within comment [-Wcomment] 838 | /* -splice.c: In function 'splice_align_left': -splice.c:69:32: warning: array subscript has type 'char' [-Wchar-subscripts] - 69 | Score(0,0)=max_score=match[*a][*b]; - | ^~ -splice.c:69:36: warning: array subscript has type 'char' [-Wchar-subscripts] - 69 | Score(0,0)=max_score=match[*a][*b]; - | ^~ -splice.c:76:20: warning: array subscript has type 'char' [-Wchar-subscripts] - 76 | score=match[a[i]][*b]; - | ~^~~ -splice.c:76:25: warning: array subscript has type 'char' [-Wchar-subscripts] - 76 | score=match[a[i]][*b]; - | ^~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:77:38: note: in expansion of macro 'Direc' - 77 | left=Score(i-1,0)+left_penalty[Direc(i-1,0)]; - | ^~~~~ -splice.c:91:19: warning: array subscript has type 'char' [-Wchar-subscripts] - 91 | score=match[*a][b[j]]; - | ^~ -splice.c:91:24: warning: array subscript has type 'char' [-Wchar-subscripts] - 91 | score=match[*a][b[j]]; - | ~^~~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:92:36: note: in expansion of macro 'Direc' - 92 | top=Score(0,j-1)+top_penalty[Direc(0,j-1)]; - | ^~~~~ -splice.c:108:25: warning: array subscript has type 'char' [-Wchar-subscripts] - 108 | score+=match[a[i]][b[j]]; - | ~^~~ -splice.c:108:31: warning: array subscript has type 'char' [-Wchar-subscripts] - 108 | score+=match[a[i]][b[j]]; - | ~^~~ -splice.c:111:24: warning: array subscript has type 'char' [-Wchar-subscripts] - 111 | score=match[a[i]][b[j]]; - | ~^~~ -splice.c:111:30: warning: array subscript has type 'char' [-Wchar-subscripts] - 111 | score=match[a[i]][b[j]]; - | ~^~~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:114:38: note: in expansion of macro 'Direc' - 114 | top=Score(i,j-1)+top_penalty[Direc(i,j-1)]; - | ^~~~~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:115:40: note: in expansion of macro 'Direc' - 115 | left=Score(i-1,j)+left_penalty[Direc(i-1,j)]; - | ^~~~~ -splice.c:140:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] - 140 | while (direc=Direc(i,j)) - | ^~~~~ -splice.c: In function 'splice_align_right': -splice.c:190:30: warning: array subscript has type 'char' [-Wchar-subscripts] - 190 | Score(0,0)=max_score=match[*a][*b]; - | ^~ -splice.c:190:34: warning: array subscript has type 'char' [-Wchar-subscripts] - 190 | Score(0,0)=max_score=match[*a][*b]; - | ^~ -splice.c:197:18: warning: array subscript has type 'char' [-Wchar-subscripts] - 197 | score=match[a[i]][*b]; - | ~^~~ -splice.c:197:23: warning: array subscript has type 'char' [-Wchar-subscripts] - 197 | score=match[a[i]][*b]; - | ^~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:198:36: note: in expansion of macro 'Direc' - 198 | left=Score(i-1,0)+left_penalty[Direc(i-1,0)]; - | ^~~~~ -splice.c:212:17: warning: array subscript has type 'char' [-Wchar-subscripts] - 212 | score=match[*a][b[j]]; - | ^~ -splice.c:212:22: warning: array subscript has type 'char' [-Wchar-subscripts] - 212 | score=match[*a][b[j]]; - | ~^~~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:213:34: note: in expansion of macro 'Direc' - 213 | top=Score(0,j-1)+top_penalty[Direc(0,j-1)]; - | ^~~~~ -splice.c:229:23: warning: array subscript has type 'char' [-Wchar-subscripts] - 229 | score+=match[a[i]][b[j]]; - | ~^~~ -splice.c:229:29: warning: array subscript has type 'char' [-Wchar-subscripts] - 229 | score+=match[a[i]][b[j]]; - | ~^~~ -splice.c:232:22: warning: array subscript has type 'char' [-Wchar-subscripts] - 232 | score=match[a[i]][b[j]]; - | ~^~~ -splice.c:232:28: warning: array subscript has type 'char' [-Wchar-subscripts] - 232 | score=match[a[i]][b[j]]; - | ~^~~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:235:36: note: in expansion of macro 'Direc' - 235 | top=Score(i,j-1)+top_penalty[Direc(i,j-1)]; - | ^~~~~ -splice.c:17:38: warning: array subscript has type 'char' [-Wchar-subscripts] - 17 | #define Direc(x, y) splice_direc_base[(y)*width+(x)] - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -splice.c:236:38: note: in expansion of macro 'Direc' - 236 | left=Score(i-1,j)+left_penalty[Direc(i-1,j)]; - | ^~~~~ -splice.c:261:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses] - 261 | while (direc=Direc(i,j)) - | ^~~~~ -splice.c:277:15: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 277 | if (j>=span && j>=width-max_i || j>height/2) - | ~~~~~~~~^~~~~~~~~~~~~~~~~ +lucy.c:632:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 632 | fgets(buf, BUFFER_LENGTH, qul_file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vector.c: In function 'tag_code': vector.c:45:10: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized] 45 | return tmp; @@ -811,7 +847,7 @@ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lucy-1.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -o lucy lucy.o qual_trim.o abi.o vector.o splice.o poly.o -lpthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[1]: Leaving directory '/build/reproducible-path/lucy-1.20' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-H5Ch8nuj + rm -fr -- /tmp/dh-xdg-rundir-xBGF9AMD create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/lucy.substvars @@ -910,8 +946,8 @@ cd debian/.debhelper/lucy/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/lucy/dbgsym-root/DEBIAN/md5sums dh_builddeb - dpkg-deb --root-owner-group --build debian/lucy .. dpkg-deb --root-owner-group --build debian/.debhelper/lucy/dbgsym-root .. + dpkg-deb --root-owner-group --build debian/lucy .. dpkg-deb: building package 'lucy' in '../lucy_1.20-5_arm64.deb'. dpkg-deb: building package 'lucy-dbgsym' in '../lucy-dbgsym_1.20-5_arm64.deb'. dpkg-genbuildinfo --build=binary -O../lucy_1.20-5_arm64.buildinfo @@ -921,12 +957,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/4133407/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1054612 and its subdirectories -I: Current time: Mon Dec 2 09:58:49 -12 2024 -I: pbuilder-time-stamp: 1733176729 +I: removing directory /srv/workspace/pbuilder/4133407 and its subdirectories +I: Current time: Tue Dec 3 11:59:24 +14 2024 +I: pbuilder-time-stamp: 1733176764