Diff of the two buildlogs: -- --- b1/build.log 2025-09-29 17:35:43.880150522 +0000 +++ b2/build.log 2025-09-29 18:59:15.841986094 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Sep 29 04:13:05 -12 2025 -I: pbuilder-time-stamp: 1759162385 +I: Current time: Mon Nov 2 13:58:46 +14 2026 +I: pbuilder-time-stamp: 1793577526 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -39,53 +39,85 @@ dpkg-source: info: applying python_depends_nanobind.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/470165/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 1 23:59 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='6226ba627131498baa77e05d427025eb' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='470165' - PS1='# ' - PS2='> ' + INVOCATION_ID=c3431ea623af42ff810bf515ecd64a18 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2218442 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G82Hg5AC/pbuilderrc_veHz --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G82Hg5AC/b1 --logfile b1/build.log fenics-dolfinx_0.9.0-8.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G82Hg5AC/pbuilderrc_voKH --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G82Hg5AC/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-8.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/470165/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -852,7 +884,7 @@ Get: 599 http://deb.debian.org/debian unstable/main arm64 python3-sphinxcontrib.jquery all 4.1-6 [7496 B] Get: 600 http://deb.debian.org/debian unstable/main arm64 python3-sphinx-rtd-theme all 3.0.2+dfsg-3 [29.7 kB] Get: 601 http://deb.debian.org/debian unstable/main arm64 python3-virtualenv all 20.34.0+ds-1 [75.9 kB] -Fetched 560 MB in 5s (111 MB/s) +Fetched 560 MB in 3s (189 MB/s) Preconfiguring packages ... Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) @@ -2758,8 +2790,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Sep 29 16:14:42 UTC 2025. -Universal Time is now: Mon Sep 29 16:14:42 UTC 2025. +Local time is now: Mon Nov 2 00:00:47 UTC 2026. +Universal Time is now: Mon Nov 2 00:00:47 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:arm64 (1.83.0-5) ... @@ -3345,7 +3377,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-8_source.changes +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-8_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-8 dpkg-buildpackage: info: source distribution unstable @@ -3491,7 +3527,7 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (10.9s) +-- Configuring done (7.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -3626,7 +3662,7 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (8.9s) +-- Configuring done (8.0s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -3659,30 +3695,30 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real' -[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o +[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o +[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp +[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-8\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp -[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp -[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o +[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp -[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -MF CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp [ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o @@ -3714,9 +3750,9 @@ [ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp [ 67%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o -MF CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o.d -o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp [ 69%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o -MF CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o.d -o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.cpp [ 72%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o @@ -3765,29 +3801,29 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex' +[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS 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/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp -[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-8\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED 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dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD 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-isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp +[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp +[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o cd 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/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp -[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o +[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS 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dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 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/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp +[ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem 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-isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC 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dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time 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/usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (5.5s) +-- Configuring done (7.9s) -- Generating done (0.0s) --- Build files have been written to: /tmp/tmpudzzdfor/build +-- Build files have been written to: /tmp/tmp0_e83y9n/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmpudzzdfor/build' +Change Dir: '/tmp/tmp0_e83y9n/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmpudzzdfor/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpudzzdfor/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmpudzzdfor/build/CMakeFiles /tmp/tmpudzzdfor/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmp0_e83y9n/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp0_e83y9n/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E 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-fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4109,14 +4145,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ft.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/aarch64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmpudzzdfor/build' +gmake[4]: Leaving directory '/tmp/tmp0_e83y9n/build' [ 48%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmpudzzdfor/build' -cd /tmp/tmpudzzdfor/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpudzzdfor/build /tmp/tmpudzzdfor/build /tmp/tmpudzzdfor/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmpudzzdfor/build' +gmake[4]: Entering directory '/tmp/tmp0_e83y9n/build' +cd /tmp/tmp0_e83y9n/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp0_e83y9n/build /tmp/tmp0_e83y9n/build /tmp/tmp0_e83y9n/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp0_e83y9n/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmpudzzdfor/build' +gmake[4]: Entering directory '/tmp/tmp0_e83y9n/build' [ 52%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.13 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 56%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4156,16 +4192,16 @@ /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/aarch64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,--dependency-file=CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-313-aarch64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/openmpi:/usr/lib/aarch64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/aarch64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/aarch64-linux-gnu/libpugixml.so.1.14 /usr/lib/aarch64-linux-gnu/libbasix.so.0.9.0 /usr/lib/aarch64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/aarch64-linux-gnu/libspdlog.so.1.15.3 /usr/lib/aarch64-linux-gnu/libfmt.so.10.1.0 /usr/lib/aarch64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/aarch64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/aarch64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/lib/libpetsc_real.so -gmake[4]: Leaving directory '/tmp/tmpudzzdfor/build' +gmake[4]: Leaving directory '/tmp/tmp0_e83y9n/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmpudzzdfor/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmpudzzdfor/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmpudzzdfor/build' +gmake[3]: Leaving directory '/tmp/tmp0_e83y9n/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp0_e83y9n/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp0_e83y9n/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmpudzzdfor/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmpudzzdfor/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/openmpi:/usr/lib/aarch64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/lib" +-- Installing: /tmp/tmp0_e83y9n/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp0_e83y9n/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/openmpi:/usr/lib/aarch64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-real/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp313-cp313-linux_aarch64.whl Successfully built fenics_dolfinx-0.9.0-cp313-cp313-linux_aarch64.whl @@ -4297,8 +4333,8 @@ ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). - By 2026-Feb-18, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** @@ -4317,27 +4353,27 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -13.31s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -9.36s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -9.16s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +13.38s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +9.19s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +9.18s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 4.56s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -3.84s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -3.78s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -3.57s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -3.50s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -3.43s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] -3.31s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -3.28s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] -3.20s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -3.10s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] -3.09s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] -3.09s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] -3.07s call test/unit/fem/test_interpolation.py::test_interpolation_non_affine_nonmatching_maps -2.93s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -2.92s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] -2.90s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -2.83s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float32] -= 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 9 warnings in 1180.37s (0:19:40) = +4.26s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +3.99s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +3.93s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +3.53s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +3.51s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +3.44s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +3.43s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] +3.38s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] +3.33s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] +3.31s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] +3.23s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +3.22s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +3.21s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_block_nl +3.20s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.19s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +3.06s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] += 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 9 warnings in 1192.49s (0:19:52) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-aarch64-linux-gnu-complex && make -j12 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no INSTALL="install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex' @@ -4503,7 +4539,7 @@ * Building wheel... *** scikit-build-core 0.11.6 using CMake 3.31.6 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmppuvasrtv/build/CMakeInit.txt +loading initial cache file /tmp/tmpj_2vsk37/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 @@ -4558,24 +4594,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/aarch64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (3.6s) +-- Configuring done (3.9s) -- Generating done (0.0s) --- Build files have been written to: /tmp/tmppuvasrtv/build +-- Build files have been written to: /tmp/tmpj_2vsk37/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmppuvasrtv/build' +Change Dir: '/tmp/tmpj_2vsk37/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmppuvasrtv/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmppuvasrtv/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmppuvasrtv/build/CMakeFiles /tmp/tmppuvasrtv/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmpj_2vsk37/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpj_2vsk37/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmpj_2vsk37/build/CMakeFiles /tmp/tmpj_2vsk37/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmppuvasrtv/build' +gmake[3]: Entering directory '/tmp/tmpj_2vsk37/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmppuvasrtv/build' -cd /tmp/tmppuvasrtv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmppuvasrtv/build /tmp/tmppuvasrtv/build /tmp/tmppuvasrtv/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmppuvasrtv/build' +gmake[4]: Entering directory '/tmp/tmpj_2vsk37/build' +cd /tmp/tmpj_2vsk37/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpj_2vsk37/build /tmp/tmpj_2vsk37/build /tmp/tmpj_2vsk37/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmpj_2vsk37/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmppuvasrtv/build' +gmake[4]: Entering directory '/tmp/tmpj_2vsk37/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4603,14 +4639,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ft.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/aarch64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmppuvasrtv/build' +gmake[4]: Leaving directory '/tmp/tmpj_2vsk37/build' [ 48%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmppuvasrtv/build' -cd /tmp/tmppuvasrtv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmppuvasrtv/build /tmp/tmppuvasrtv/build /tmp/tmppuvasrtv/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmppuvasrtv/build' +gmake[4]: Entering directory '/tmp/tmpj_2vsk37/build' +cd /tmp/tmpj_2vsk37/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpj_2vsk37/build /tmp/tmpj_2vsk37/build /tmp/tmpj_2vsk37/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmpj_2vsk37/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmppuvasrtv/build' +gmake[4]: Entering directory '/tmp/tmpj_2vsk37/build' [ 52%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.13 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 56%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4650,16 +4686,16 @@ /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/aarch64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,--dependency-file=CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-313-aarch64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/openmpi:/usr/lib/aarch64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/aarch64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/aarch64-linux-gnu/libpugixml.so.1.14 /usr/lib/aarch64-linux-gnu/libbasix.so.0.9.0 /usr/lib/aarch64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/aarch64-linux-gnu/libspdlog.so.1.15.3 /usr/lib/aarch64-linux-gnu/libfmt.so.10.1.0 /usr/lib/aarch64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/aarch64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/aarch64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/lib/libpetsc_complex.so -gmake[4]: Leaving directory '/tmp/tmppuvasrtv/build' +gmake[4]: Leaving directory '/tmp/tmpj_2vsk37/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmppuvasrtv/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmppuvasrtv/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmppuvasrtv/build' +gmake[3]: Leaving directory '/tmp/tmpj_2vsk37/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmpj_2vsk37/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmpj_2vsk37/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmppuvasrtv/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmppuvasrtv/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/openmpi:/usr/lib/aarch64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/lib" +-- Installing: /tmp/tmpj_2vsk37/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmpj_2vsk37/wheel/platlib/dolfinx/cpp.cpython-313-aarch64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/aarch64-linux-gnu:/usr/lib/aarch64-linux-gnu/hdf5/openmpi:/usr/lib/aarch64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/aarch64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/aarch64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp313-cp313-linux_aarch64.whl Successfully built fenics_dolfinx-0.9.0-cp313-cp313-linux_aarch64.whl @@ -4795,8 +4831,8 @@ ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). - By 2026-Feb-18, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** @@ -4815,27 +4851,27 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -27.68s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -9.24s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -9.23s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] -6.47s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -6.23s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -4.70s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -4.20s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -4.17s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -4.02s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -3.95s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] -3.65s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -3.56s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] -3.53s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] -3.50s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -3.46s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] -3.43s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] -3.37s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -3.31s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh0] -3.29s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] -3.19s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -= 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 81 warnings in 1216.88s (0:20:16) = +17.23s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +9.17s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +9.14s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +5.02s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +4.87s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.87s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +4.78s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +4.20s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +4.09s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] +3.93s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] +3.88s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +3.52s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +3.51s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] +3.44s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +3.43s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] +3.43s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +3.42s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_block_nl +3.34s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.31s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] +3.27s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Lagrange-3-4] += 2542 passed, 69 skipped, 29 xfailed, 5 xpassed, 81 warnings in 1242.70s (0:20:42) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/aarch64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/aarch64-linux-gnu/pkgconfig/dolfinx*.pc @@ -4917,7 +4953,7 @@ -- Found ADIOS2: /usr/lib/aarch64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (2.7s) +-- Configuring done (4.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -4982,11 +5018,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 0.43 sec +1/1 Test #1: unittests ........................ Passed 0.46 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 0.45 sec +Total Test time (real) = 0.48 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 15.2.0 @@ -5042,8 +5078,8 @@ -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success --- Configuring done (2.4s) --- Generating done (0.0s) +-- Configuring done (4.1s) +-- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 @@ -5182,57 +5218,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 - 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.84 sec + 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.41 sec Start 2: demo_biharmonic_mpi_3 - 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.32 sec + 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.39 sec Start 3: demo_biharmonic_serial - 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.29 sec + 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.22 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.18 sec + 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.25 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.20 sec + 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.25 sec Start 6: demo_codim_0_assembly_serial - 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.11 sec + 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.16 sec Start 7: demo_custom_kernel_mpi_2 - 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.68 sec + 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.75 sec Start 8: demo_custom_kernel_mpi_3 - 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.57 sec + 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.68 sec Start 9: demo_custom_kernel_serial - 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.56 sec + 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.62 sec Start 10: demo_poisson_mpi_2 -10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.26 sec +10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.32 sec Start 11: demo_poisson_mpi_3 -11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.19 sec +11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.25 sec Start 12: demo_poisson_serial -12/24 Test #12: demo_poisson_serial .......................... Passed 0.12 sec +12/24 Test #12: demo_poisson_serial .......................... Passed 0.14 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.19 sec +13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.24 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.22 sec +14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.23 sec Start 15: demo_poisson_matrix_free_serial -15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.10 sec +15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.11 sec Start 16: demo_hyperelasticity_mpi_2 -16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.32 sec +16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.20 sec Start 17: demo_hyperelasticity_mpi_3 -17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.39 sec +17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.56 sec Start 18: demo_hyperelasticity_serial -18/24 Test #18: demo_hyperelasticity_serial .................. Passed 0.79 sec +18/24 Test #18: demo_hyperelasticity_serial .................. Passed 0.87 sec Start 19: demo_interpolation-io_mpi_2 19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.23 sec Start 20: demo_interpolation-io_mpi_3 -20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.21 sec +20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.23 sec Start 21: demo_interpolation-io_serial 21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.11 sec Start 22: demo_interpolation_different_meshes_mpi_2 -22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.67 sec +22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.61 sec Start 23: demo_interpolation_different_meshes_mpi_3 -23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.37 sec +23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.48 sec Start 24: demo_interpolation_different_meshes_serial -24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.52 sec +24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.55 sec 100% tests passed, 0 tests failed out of 24 -Total Test time (real) = 20.46 sec +Total Test time (real) = 20.85 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build @@ -5287,7 +5323,7 @@ -- Found ADIOS2: /usr/lib/aarch64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (3.0s) +-- Configuring done (3.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -5352,11 +5388,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 0.41 sec +1/1 Test #1: unittests ........................ Passed 0.47 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 0.41 sec +Total Test time (real) = 0.47 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 15.2.0 @@ -5413,7 +5449,7 @@ -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode --- Configuring done (3.9s) +-- Configuring done (3.4s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/run_demo' @@ -5536,51 +5572,51 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 - 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.78 sec + 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.32 sec Start 2: demo_biharmonic_mpi_3 - 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.34 sec + 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.33 sec Start 3: demo_biharmonic_serial - 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.28 sec + 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.26 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.25 sec + 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.19 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.25 sec + 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.21 sec Start 6: demo_codim_0_assembly_serial - 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.14 sec + 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.10 sec Start 7: demo_custom_kernel_mpi_2 - 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.79 sec + 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.78 sec Start 8: demo_custom_kernel_mpi_3 - 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.78 sec + 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.61 sec Start 9: demo_custom_kernel_serial - 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.58 sec + 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.56 sec Start 10: demo_poisson_mpi_2 -10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.29 sec +10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.23 sec Start 11: demo_poisson_mpi_3 -11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.28 sec +11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.22 sec Start 12: demo_poisson_serial -12/21 Test #12: demo_poisson_serial .......................... Passed 0.16 sec +12/21 Test #12: demo_poisson_serial .......................... Passed 0.11 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.25 sec +13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.18 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.23 sec +14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.21 sec Start 15: demo_poisson_matrix_free_serial -15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.10 sec +15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.11 sec Start 16: demo_interpolation-io_mpi_2 -16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.27 sec +16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.21 sec Start 17: demo_interpolation-io_mpi_3 -17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.26 sec +17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.24 sec Start 18: demo_interpolation-io_serial 18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.17 sec Start 19: demo_interpolation_different_meshes_mpi_2 -19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.79 sec +19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.58 sec Start 20: demo_interpolation_different_meshes_mpi_3 -20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.70 sec +20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.60 sec Start 21: demo_interpolation_different_meshes_serial -21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.52 sec +21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.54 sec 100% tests passed, 0 tests failed out of 21 -Total Test time (real) = 18.22 sec +Total Test time (real) = 16.77 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-aarch64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep @@ -6683,8 +6719,8 @@ MPLBACKEND=agg \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v8.2.3 -mkdir -p failed for path /nonexistent/first-build/.config/matplotlib: [Errno 13] Permission denied: '/nonexistent' -Matplotlib created a temporary cache directory at /tmp/matplotlib-92uej_m8 because there was an issue with the default path (/nonexistent/first-build/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +mkdir -p failed for path /nonexistent/second-build/.config/matplotlib: [Errno 13] Permission denied: '/nonexistent' +Matplotlib created a temporary cache directory at /tmp/matplotlib-7wqh_fyu because there was an issue with the default path (/nonexistent/second-build/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. @@ -6888,19 +6924,19 @@ TNT degree 2 error: 0.0029421918345155494 TNT degree 2 error: 0.00017118942553983685 TNT degree 3 error: 8.385106828686896e-06 -TNT degree 4 error: 3.394990202513205e-07 -TNT degree 5 error: 1.2528243084154117e-08 -TNT degree 6 error: 4.2428890461820437e-10 +TNT degree 4 error: 3.3949902025301026e-07 +TNT degree 5 error: 1.2528242987788332e-08 +TNT degree 6 error: 4.2428246817345834e-10 TNT degree 7 error: 1.983994720827379e-10 -TNT degree 8 error: 2.944252160066759e-10 +TNT degree 8 error: 2.9346445299515664e-10 Q degree 1 error: 0.04076382001057629 -Q degree 2 error: 0.002918221339526894 -Q degree 3 error: 0.00015944660110815673 -Q degree 4 error: 7.937421445041956e-06 -Q degree 5 error: 3.103466862522169e-07 -Q degree 6 error: 1.1356499060702813e-08 -Q degree 7 error: 3.416137632173649e-10 -Q degree 8 error: 6.190178911280577e-11 +Q degree 2 error: 0.0029182213395268844 +Q degree 3 error: 0.00015944660110815624 +Q degree 4 error: 7.937421445042693e-06 +Q degree 5 error: 3.1034668624872494e-07 +Q degree 6 error: 1.1356499066951904e-08 +Q degree 7 error: 3.416141370602487e-10 +Q degree 8 error: 6.190538267834018e-11 Computed L2 interpolation error (equispaced): 0.015885065134586082 Computed L2 interpolation error (gll_warped): 0.001513710862352029 loading translations [en]... done @@ -7193,23 +7229,23 @@ echo "python3-petsc4py-complex:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-complex (>= 3.22), python3-petsc4py-complex (<< 3.23), python3-slepc4py-complex (>= 3.22), python3-slepc4py-complex (<< 3.23)" >> debian/python3-dolfinx-complex.substvars echo "python-petsc4py-alt:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.22), python3-petsc4py-real (<< 3.23), python3-slepc4py-real (>= 3.22), python3-slepc4py-real (<< 3.23)" >> debian/libdolfinx-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.22-dev, libslepc-real3.22-dev" -Vpetsc-complex:Depends="libpetsc-complex3.22-dev, libslepc-complex3.22-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ -dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: Depends field of package python3-dolfinx: substitution variable ${python3:Depends} used, but is not defined +dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake -dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-8_arm64.deb'. -dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-8_arm64.deb'. dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-8_arm64.deb'. -dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-8_arm64.deb'. -dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-8_arm64.deb'. -dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-8_arm64.deb'. +dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-8_all.deb'. +dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-8_arm64.deb'. +dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-8_arm64.deb'. dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-8_arm64.deb'. +dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-8_arm64.deb'. dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-8_arm64.deb'. dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-8_arm64.deb'. -dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-8_arm64.deb'. -dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-8_all.deb'. +dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-8_arm64.deb'. +dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-8_arm64.deb'. +dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-8_arm64.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-8_arm64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-8_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -7217,12 +7253,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2218442/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/470165 and its subdirectories -I: Current time: Mon Sep 29 05:35:43 -12 2025 -I: pbuilder-time-stamp: 1759167343 +I: removing directory /srv/workspace/pbuilder/2218442 and its subdirectories +I: Current time: Mon Nov 2 15:22:14 +14 2026 +I: pbuilder-time-stamp: 1793582534