Diff of the two buildlogs: -- --- b1/build.log 2024-10-31 08:56:58.147444517 +0000 +++ b2/build.log 2024-10-31 09:35:33.357152518 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Dec 3 03:13:08 -12 2025 -I: pbuilder-time-stamp: 1764774788 +I: Current time: Thu Oct 31 22:57:01 +14 2024 +I: pbuilder-time-stamp: 1730365021 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -30,52 +30,84 @@ dpkg-source: info: applying test_scope_for_junit.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3641472/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 31 08:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='98417c30941443428f0b435e50cc695e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3641472' - PS1='# ' - PS2='> ' + INVOCATION_ID=b2e4b49dc1cf4b158f5791888a661cf4 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1954378 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.GMXt1H8M/pbuilderrc_MZNo --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.GMXt1H8M/b1 --logfile b1/build.log snpsift_5.2.e+dfsg-1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.GMXt1H8M/pbuilderrc_dnbS --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.GMXt1H8M/b2 --logfile b2/build.log snpsift_5.2.e+dfsg-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3641472/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -461,7 +493,7 @@ Get: 318 http://deb.debian.org/debian unstable/main amd64 maven-repo-helper all 1.11 [142 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 maven-debian-helper all 2.6.5 [108 kB] -Fetched 309 MB in 17s (18.3 MB/s) +Fetched 309 MB in 18s (17.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) @@ -1508,8 +1540,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Dec 3 15:15:11 UTC 2025. -Universal Time is now: Wed Dec 3 15:15:11 UTC 2025. +Local time is now: Thu Oct 31 09:04:26 UTC 2024. +Universal Time is now: Thu Oct 31 09:04:26 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... @@ -1961,7 +1993,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/snpsift-5.2.e+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snpsift_5.2.e+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/snpsift-5.2.e+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../snpsift_5.2.e+dfsg-1_source.changes dpkg-buildpackage: info: source package snpsift dpkg-buildpackage: info: source version 5.2.e+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -1974,7 +2010,7 @@ bash -c "for dir in \$(find . -name target -type d); do if [ -f \$(echo \$dir | sed -e s/target\$/pom.xml/) ]; then rm -Rf \$dir; fi done" mh_unpatchpoms -plibsnpsift-java jh_clean -Duplicate specification "unlink|u" for option "u" +Duplicate specification "u=s" for option "u" debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/snpsift-5.2.e+dfsg' # Removing all the sidx files created during the tests. Then one of them must @@ -1995,7 +2031,7 @@ dh_autoreconf dh_auto_configure mh_patchpoms -plibsnpsift-java --debian-build --keep-pom-version --maven-repo=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian/maven-repo -Failed to parse /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom +Failed to parse /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21] Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>". at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652) @@ -2011,7 +2047,7 @@ at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107) at org.debian.maven.repo.POMTransformer.main(POMTransformer.java:779) -Failed to parse /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom +Failed to parse /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21] Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>". at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652) @@ -2182,12 +2218,12 @@ [WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&' [WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81 [WARNING] ^ -[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&' -[WARNING] * Create an AST from a program (using ANTLR lexer & parser) -[WARNING] ^ [WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&' [WARNING] * Sort VCF file/s by chromosome & position [WARNING] ^ +[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&' +[WARNING] * Create an AST from a program (using ANTLR lexer & parser) +[WARNING] ^ [WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&' [WARNING] * Get all entries at a given chromosome & position [WARNING] ^ @@ -2347,12 +2383,12 @@ [WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&' [WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81 [WARNING] ^ -[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&' -[WARNING] * Create an AST from a program (using ANTLR lexer & parser) -[WARNING] ^ [WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&' [WARNING] * Sort VCF file/s by chromosome & position [WARNING] ^ +[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&' +[WARNING] * Create an AST from a program (using ANTLR lexer & parser) +[WARNING] ^ [WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&' [WARNING] * Get all entries at a given chromosome & position [WARNING] ^ @@ -2384,8 +2420,8 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 12.923 s -[INFO] Finished at: 2025-12-03T03:15:45-12:00 +[INFO] Total time: 01:47 min +[INFO] Finished at: 2024-10-31T23:10:55+14:00 [INFO] ------------------------------------------------------------------------ debian/rules execute_before_dh_auto_test make[1]: Entering directory '/build/reproducible-path/snpsift-5.2.e+dfsg' @@ -2422,15 +2458,574 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running org.snpsift.tests.unit.TestCasesGt -TestCasesGt.test_01(25): Test -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.302 s - in org.snpsift.tests.unit.TestCasesGt -[INFO] Running org.snpsift.tests.unit.TestCasesFilterChrPos -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 s - in org.snpsift.tests.unit.TestCasesFilterChrPos -[INFO] Running org.snpsift.tests.unit.TestCasesFilterGt -TestCasesFilterGt.test_01(28): Test -TestCasesFilterGt.test_02(62): Test -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.074 s - in org.snpsift.tests.unit.TestCasesFilterGt +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameMixed +DataFrame: MIXED, size: 100, current index: 100, memory: 63.4 KB + Field types: + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + 0 130 | GACTC | ATGCTTTTACC | H | null | 1660292060 | true | VGUIHFQWUSYUOXQVRXNTLWTQRTLGZHNXJGLETAEGILYUTDVAIFEOZYGHKA | null | 0.1505474834792303 | FVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPLWOJYB | + 1 719 | AA | TTTCATAC | D | null | null | false | null | null | 0.2821982861306481 | null | + 2 1667 | GGCGTG | ACG | N | null | null | true | KT | null | 0.6610508916166571 | MFMQTLZADZBNDXVFRJHSDKMELBXLUSSYJWTCQVIFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBFUZYSR | + 3 2408 | GCGG | TGA | X | null | -926287273 | false | ETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGCXHAYYLXAIMKCTVQNSDPJFZM | null | 0.6053218598587271 | CTXUKSW | + 4 2905 | CAGGA | TGTC | C | null | -2110639781 | false | BKSLLDJGZKGHDVQLAAK | null | 0.0987491349432944 | LUYOJPARNUOSX | + 5 3569 | TACATC | GGTTA | Y | null | -1619827948 | true | FDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXPLIAMKDDP | null | 0.6958254788801048 | HRUNJEPJ | + 6 3942 | AGG | GC | E | null | 1759468634 | true | POXVODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQ | null | 0.31191986699310315 | GKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKG | + 7 4309 | GCGT | TGTGGA | B | null | 1001974229 | false | AMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTUDNVRJBQ | null | 0.9430161143370018 | OPXYAVBUFKFXCYZJXGYVI | + 8 5266 | CCA | GGCC | G | null | -1921530556 | true | GOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWY | null | 0.4442576436641098 | QAISGEPOGDMTZPNIWMONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOMBUUTBXWQKI | + 9 5514 | TAG | CC | R | null | -759679086 | false | HYLGVDHQHETXOLC | null | 0.36492146475814047 | VEUUG | + 10 6338 | AG | CTCG | M | null | -536631031 | false | FHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUC | null | 0.6880295632898734 | SCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJWQVRQ | + 11 6556 | GACGG | TCGATA | Y | null | -1809889978 | false | null | null | null | XSRWAOUSCYHUHUBGDWQETIVGKEMLVCL | + 12 7530 | GCCTC | TTTA | F | null | 125900821 | false | KFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAE | null | 0.040427108343605966 | WLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZTPWRVHQM | + 13 7848 | GCTTTT | TGAA | V | null | 552048597 | false | null | null | 0.2229941719444838 | GIC | + 14 8230 | GC | ATC | X | null | -1901567179 | false | AITLYHHFQB | null | 0.9281005456025566 | LOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKKGFWKBYZYNSNTPANSIG | + 15 9168 | CGGG | GTCCG | U | null | -1414511684 | true | TIMJZ | null | null | PMQNUGIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYV | + 16 9658 | ACG | TGCCC | H | null | -192898018 | true | null | null | 0.4896099581558816 | WHCEBYNFJGRCAUIVMXQXRDXKNXIQFMHOCPKFQIYOKFUCMTYDAXAWLEPFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDX | + 17 10210 | CTCT | GCT | I | null | -374215497 | false | QABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGF | null | 0.16071858764042235 | UUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFTBCOGQ | + 18 10777 | AGAA | CAGCT | O | null | 779853740 | false | RJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRAB | null | 0.792349918144592 | XGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFIN | + 19 11693 | ACTGCC | TGAC | null | null | null | false | SFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUSOS | null | 0.5577468336431636 | WNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJS | + 20 12285 | TGCACA | CA | V | null | null | true | VSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXT | null | 0.6271643404105325 | null | + 21 12310 | ACGTGT | CTTG | Q | null | -1617046473 | true | YHVYMSZDYZLGDMWL | null | 0.9831828393010831 | UUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDBOCPC | + 22 13067 | GT | AAAACT | null | null | -1111392265 | null | LPNFFRJWMCUWIXPNTHHZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOV | null | 0.6293056149475463 | TDQXXMYLARYBPGPAPLSOYBUKFPBAFIBSUFQU | + 23 13721 | CCTTC | GGC | I | null | -479647117 | true | null | null | 0.975556283988524 | IANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUUVSTM | + 24 14152 | TTCCTC | CCG | P | null | 446527421 | false | IUXDNSLHWUDRUSZUWXBVOU | null | 0.7515769772774136 | null | + 25 14934 | GAG | ACCC | L | null | null | false | PVRSRMKLUCGTCFRDYIDIJFXVPQAKHPQEWWNHVSQLOTM | null | 0.5907961912348977 | JNJFGBQRLQGVCFGVOADMYOHSRX | + 26 15751 | TA | CCT | J | null | 1599579110 | true | PLGGEVWJSEISSN | null | 0.4264956752414417 | HK | + 27 16453 | GGG | CC | Q | null | 167756937 | false | YPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCS | null | 0.07643741004951432 | | + 28 16633 | GG | CTCA | H | null | -1598495659 | true | MJNIGBCJUBZXLDNNXPCVBJPSNJTEHOWCPZLVRQWDHOYTRBOKNAZOGGLAHUDGHSLYCNLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVI | null | 0.37999657635046324 | | + 29 17489 | CTG | GACCA | D | null | -1354298566 | true | LCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYW | null | 0.9746654097927338 | PMURZGGYMIELVHMRKLLCGOGZ | + 30 17606 | TGTAG | CCACAGAAGC | V | null | 1878366945 | true | TSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQ | null | 0.3397356585960569 | XUCJTEKJBHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMV | + 31 18076 | GCT | CTCG | P | null | -1494948578 | false | KXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXN | null | 0.7635122604571503 | ZQWDQPYHXAJOITFCVMOPIMPXRLKAIEIOUMPNXSABCPGVHHLJEBZYNSDERCMAIXBNIQRIEMDHOQFQNJQUXLEAMIGIACWWMBNSJU | + 32 18957 | TGTG | GT | C | null | 1406916527 | true | FHE | null | 0.3484911209670729 | | + 33 19938 | ATCT | TGAAC | O | null | 1149795017 | null | NTKURUNTGXBCRIYGMXGLYBFIHLNCHAUOTOBMXBPTXHXONSYUZUFENSQQWZ | null | null | KRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJ | + 34 20585 | TA | GTCA | G | null | null | false | WOAEHZWLSQJATLMHBLMPH | null | 0.9344242335487438 | GCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVS | + 35 21560 | GA | TTA | H | null | -205155770 | null | null | null | null | JDWQYQEYTRZGFJYAWMGVKTNMFTZSO | + 36 21988 | AA | GGGT | F | null | -1432480630 | true | TILJJSHAQMNRS | null | 0.3133917870266195 | BMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOP | + 37 22427 | CCCACG | TTGT | E | null | 860447657 | true | LHWZQAMTRPVRWFEGXRZRFDZRKFJOMCLPTTEKBFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTC | null | 0.694454522391098 | null | + 38 22883 | CGA | TCGTGTTGCA | U | null | -1787101930 | true | YNVOKDHIXALLPU | null | 0.36980056706464903 | DGWDDGQCUCQXBOMEYSHE | + 39 23461 | TGTCC | CA | B | null | -1176210216 | false | SRAABIXFMQFNGHXLSOEAJKVRSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYV | null | 0.3517610111383015 | null | + 40 23891 | GATC | TCG | K | null | -2118220436 | true | TOZFRCDZWFXPYAZDFJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMY | null | 0.6397097529450779 | XXEALXRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMYY | + 41 24581 | CGG | TTTT | A | null | 426196393 | false | KUOAQXSZYHTFPESQNYFKQEPAP | null | 0.5332729085977445 | IVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQMAPZOPDSXSKNPUUTRASSVAQLB | + 42 24617 | AGAG | GACCT | null | null | -298680206 | false | COPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUO | null | 0.9217536754688332 | UYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYB | + 43 25109 | AAT | TCAGT | S | null | -1807342243 | true | PKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOV | null | 0.028187333666930825 | QHQDIEBEXBHJFIMPPDVZXFSSIZVMSEVENLFRCLOJVRJUUTROOOT | + 44 25687 | GA | CGCCCC | R | null | 1025744915 | true | LAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDP | null | 0.761817576180882 | WOPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDK | + 45 25708 | TC | GTCTC | null | null | 1837325288 | false | null | null | 0.7695808495019865 | OOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQ | + 46 26557 | CC | GAA | Z | null | 1120279121 | false | LTTAXEEGFQGXLBBHXRCJVLXRLFKYGSTLWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNR | null | 0.8524057650440213 | null | + 47 27162 | GTAG | TCGTT | Z | null | 52752038 | true | BPZBSVD | null | 0.8135675453387192 | KD | + 48 27375 | CAA | ACGTT | O | null | 350350448 | false | null | null | 0.03426922763719786 | JAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNC | + 49 27499 | AAG | TGCAGT | A | null | 23904471 | false | null | null | 0.555524367802816 | NYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXADIYLUONTQ | + 50 27892 | TT | GGAG | Z | null | 980648983 | false | YHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNPAZQNUZCBTV | null | 0.9356403643683727 | DXIFUGVSFLODMYZHIL | + 51 28540 | GCCG | AG | D | null | -1499042282 | false | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO | null | 0.2701407767298879 | null | + 52 29421 | GGTC | AAGGGG | H | null | -1649570894 | true | DFFUUTDDXURSPKSC | null | 0.5873439005542106 | URGROVHDGOLLVMWBULF | + 53 30224 | TAT | AGGC | O | null | null | false | null | null | 0.07495722896453205 | VEDGKFHPAFTMIKDCKWPZQGZKFCTREWKRHVHNGEOUBUIDIWX | + 54 31106 | GCAA | TA | C | null | -130152109 | true | PXLEGILTKJKBPLEWXUAUUEGQTKNBBOPMKWBRCLYRX | null | 0.8287913220463654 | UDXOHXBODYUAKYGAHTLQELXYTJ | + 55 31183 | GGA | CA | Z | null | 2067688714 | true | CKZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVT | null | 0.24977730671660292 | GJOTHKAVFTWIUOIHRTVRUY | + 56 31297 | ATTG | TG | R | null | 1742753232 | false | NSIEYGJ | null | 0.7375087780942288 | MUPECSVBKGRQSNGD | + 57 31496 | AGGAAT | GT | I | null | 2017697704 | true | FHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGN | null | 0.3831208851383727 | EBKTFLFFLUFTSGJBQGYPKJPUATVBRLNYHIUPECZERSOMBIFLOGISAKLNHGVIVMCRZG | + 58 32442 | GCCCG | TAAGTT | A | null | -1205957868 | false | EERZXKCHCRVOGQDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIR | null | 0.8878475241886875 | ZCCVYKLUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQ | + 59 33428 | GG | CCTATG | null | null | 1219143705 | false | NVUBWFASDAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPP | null | 0.7441218930581249 | HHGTIVJGFPETBDVJSQBAQBCZIHQFIGJUIQDVGBKHIBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFE | + 60 33855 | AGTTTG | GCG | D | null | -2022598863 | false | SRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXWNYPFV | null | null | DZLRXCLXTZSXTKYSTMBQGGRL | + 61 33915 | ACGC | TACGACCGTGT | H | null | -1128367852 | null | TMPMZPSCZTRZLGJ | null | 0.5491902435953122 | null | + 62 34483 | TAGC | CGCGAT | null | null | -1557358100 | true | CYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEI | null | 0.31295892252145074 | CGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJK | + 63 34709 | CCC | AGGA | J | null | -835675181 | true | JCLUBGMVFISLNJIC | null | 0.9602366045493509 | VLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZ | + 64 35340 | TTC | GGACA | K | null | -166905458 | true | WFEBOBSMKUXNYIRQCUBYGFSIMFYUAOECXQBG | null | 0.8602483882443271 | NPJBGGWENLYYCJTPADCDDQOGHMOVVSZJD | + 65 35472 | TGAGGC | GCGAA | E | null | -1631313891 | true | NDQIYDBVMBDDWTLHTNDQJWCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXV | null | 0.12363944563302387 | null | + 66 35669 | ATTGA | TCCTCA | C | null | -588298380 | false | IQCYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJBEA | null | 0.8550234837562305 | VMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBFWBJNIIFDYZWDSDUABTFOWDJHCNWEFLHQSSDKFHQVLDLE | + 67 35728 | GAACCT | CTTT | H | null | -747544882 | null | IDKXPHFOTFRATSTVGMMNADVITTBCUBYQE | null | 0.7490687548616841 | OMXYIBMPQHOMYJBNEODMVEEFBCTJXH | + 68 36183 | AC | CATTA | I | null | -1319632117 | false | CTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRL | null | 0.4413689991083415 | EUXCUGFHDUYGCNDAMPRDV | + 69 36578 | AAAT | GGCAT | R | null | null | false | GDVIDDYSIARMFNRXIDQWTWJFLQPICW | null | 0.43186967699327505 | HYNPLTFNBOQDFQOS | + 70 36971 | ACTTG | GG | null | null | 1277958572 | false | DARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPHFWRRBUMUSFMSQDSIHADOFZLPCQVYZEBMKVBMFPHNELK | null | 0.4453573989044963 | TPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQD | + 71 37618 | TTAG | CAG | B | null | 1037393841 | false | BHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCDB | null | 0.39609232226749236 | null | + 72 38201 | TAC | ACGTC | D | null | -2079477320 | false | ZGJVDJEEACE | null | 0.07742081110010546 | YUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLLIVKIMHNAJEWWRVWIZSG | + 73 38493 | GCCTG | CAGA | H | null | -1463798583 | null | KVEWCKVJHOOKWRVKHVYQCQKXUPYHKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRG | null | 0.9277467500723097 | | + 74 38540 | GGA | TATT | J | null | -1689361592 | true | IUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCBUUEXHGUEQLV | null | 0.8092660381674348 | KTOJGDTUTFKJQGNEXEKZSZQSANBMVAXRABRZWJEAEABTMFLNYIAJYPSXDXCZBQOPQMSFJNWUVWDOSQMSW | + 75 39183 | AG | CTTTG | R | null | -1961645317 | false | UHAVSYGXMMWZ | null | 0.7538616470122224 | LYWEJMYHNTTSXXCLCCPJRBGGEOPFR | + 76 39799 | GT | AAT | null | null | -110423199 | false | TENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWSCGDKYTEGYYTNJQB | null | 0.12046287233320274 | IYFBAUNPDVYDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJ | + 77 40229 | TTGTTT | CCAA | V | null | 1431130355 | false | KLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJASSEOOTVOMHEQALCBNSOIUBJHULZAQBBRFRJGAZJ | null | 0.7558427773660447 | BVHLRZZCIVSXZRKBEOERVKNQMYPBSUHNQKRZJLAUPUQUKFCWVILOI | + 78 40732 | CTCC | AATGT | G | null | 587644912 | true | LHXNORWCADYZZKOKNDIJQWVENOKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEPCPEAN | null | 0.4224823862977449 | MDCUYXFUMVUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDII | + 79 41491 | CACA | ACTGCTTCG | H | null | -554956194 | false | OLXJAFLXULPZGOHHPVYKONTTVCOQ | null | 0.5208315202141268 | LOGWYTQNLEWXWB | + 80 41770 | AAAT | CTGATTAGAC | W | null | -985447616 | true | ORFBZWSPFYBDENAEMVIQZBDVRTNVQWSKU | null | 0.7821972190790509 | NRKHLCUIXZZIYXHYQTEPKZLFFDEOMBEYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJTIMZCUTWALOTKN | + 81 42042 | AAGCGC | GT | M | null | -1038527991 | true | MSBKHRYXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZRA | null | 0.37288256822247545 | TKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQVTGTYHRYIKSBPMDLKYANUQQSBHH | + 82 42652 | GTG | AC | P | null | 1557281811 | true | SFUBICUYVGZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNSV | null | null | DYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWXLIDELTXVWYOGYCNFDSSXEVDGHUMRBMPSIPOELOIZ | + 83 43313 | GAGAA | ATACTTAGAA | R | null | 978785572 | true | null | null | 0.32522709311038844 | ULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAP | + 84 43685 | TA | CTGA | S | null | 1153307754 | true | UVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNV | null | 0.17365479912109194 | LFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBU | + 85 44141 | ACG | CGCCATT | I | null | -999066038 | false | QVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXIWYNWPONALNRDOU | null | 0.8295755949338437 | null | + 86 44779 | CTATA | TGGAGT | R | null | null | false | VNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURGSXFJCAXCGZKZKGXUYPFWXONPKQUQOCSOLG | null | 0.7400197473135066 | YBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFW | + 87 45371 | GACTA | CC | K | null | 468567806 | true | RORVMYYKPYAM | null | 0.11273881633613159 | IGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQ | + 88 45571 | TAACTC | GCC | F | null | -287500759 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.8056508189855021 | EGYAKQZXEGXNLLREPZFWVCTQTH | + 89 46066 | GGCAG | AAA | C | null | -493586842 | true | AHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGT | null | 0.612124337258956 | UNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPI | + 90 46985 | TAG | CTTA | W | null | 351786237 | null | XUNGJITKBVEEPVVKXCSIXIBPDCIIEIJGPIYRYOKKJGWQFGMJFLHZAHXAQFYBZVVK | null | 0.27826706664560996 | AMVZAAQHDHBHFFAYFMRFB | + 91 47081 | TACCC | AGAG | E | null | -36353828 | true | KKJO | null | 0.0291007292139015 | TKZUZKDQYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWS | + 92 47907 | ATTCA | TCC | A | null | 613424168 | false | FSUXWPAZCGDEZLOURIYYLWILVSASNXJPRPTZJUVXIXGKFSRYQHMBXLWGDWVBAGMP | null | 0.2190837769941144 | YSMVTAGLUX | + 93 48226 | TAGC | GTATTATCGC | Q | null | 1202745151 | false | HMAZQXNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJUZMHOMCUHBNTWZFLRLFXDZVCSKRHFAOHYQERO | null | 0.3656546516594086 | HTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWL | + 94 48416 | GA | ATTC | B | null | -1923088956 | false | NYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJK | null | 0.8751078883243962 | YOQUBORWBWITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYREHOBNQZAXRCSAFUCKBVTXSFZIRE | + 95 49291 | TCCT | GGG | B | null | null | false | ERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHO | null | 0.7202708244462117 | DOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCI | + 96 49771 | TGGT | CAC | P | null | -1705231585 | false | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | null | 0.03359993949940343 | null | + 97 50142 | TTCTA | GAAA | R | null | 789177677 | true | null | null | 0.42057612519588505 | NLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZAUQLGKFGNIUNTJWMMJQHSKQBSLLSGOWIMIRRBIEZVEAOMGJ | + 98 50305 | GGA | AAGG | G | null | -1078219233 | null | LOOZKHCWJZYEZKSPMSDXYJXODFUCNQJPJJQLSMLNNQFYIWKZIBFJARVKVELGNMJBSLVSOJJPATNF | null | 0.7680804977882877 | null | + 99 50789 | CTCC | TGATA | N | null | -1627198920 | false | JAJASVDEOFQ | null | 0.5578843763975981 | GYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEH | + +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.861 s - in org.snpsift.tests.unit.TestCasesDataFrameMixed +[INFO] Running org.snpsift.tests.unit.TestCasesBoolArray +[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.008 s - in org.snpsift.tests.unit.TestCasesBoolArray +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnBool +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.307 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnBool +[INFO] Running org.snpsift.tests.unit.TestCasesFilterALL +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.11 s - in org.snpsift.tests.unit.TestCasesFilterALL +[INFO] Running org.snpsift.tests.unit.TestCasesIndex +TestCasesIndex.test_01(32): Test +TestCasesIndex.test_02(84): Test +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 17.201 s - in org.snpsift.tests.unit.TestCasesIndex +[INFO] Running org.snpsift.tests.unit.TestCasesDbNsfpDeleteCache +TestCasesDbNsfp.test_01(113): Test +TestCasesDbNsfp.test_02(138): Test +TestCasesDbNsfp.test_03(160): Test +TestCasesDbNsfp.test_04(179): Test +TestCasesDbNsfp.test_05(200): Test +TestCasesDbNsfp.test_06(223): Test +[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 87.604 s - in org.snpsift.tests.unit.TestCasesDbNsfpDeleteCache +[INFO] Running org.snpsift.tests.unit.TestCasesExtractFields +TestCasesExtractFields.test_31_ann(291): Test +TestCasesExtractFields.test_00(71): Test +TestCasesExtractFields.test_01(98): Test +TestCasesExtractFields.test_02(104): Test +TestCasesExtractFields.test_03(110): Test +TestCasesExtractFields.test_04(116): Test +TestCasesExtractFields.test_05(122): Test +TestCasesExtractFields.test_06(128): Test +TestCasesExtractFields.test_07(134): Test +TestCasesExtractFields.test_08(140): Test +TestCasesExtractFields.test_09(146): Test +TestCasesExtractFields.test_10(152): Test +TestCasesExtractFields.test_11(158): Test +TestCasesExtractFields.test_12(164): Test +TestCasesExtractFields.test_13(170): Test +TestCasesExtractFields.test_14(176): Test +TestCasesExtractFields.test_15(182): Test +TestCasesExtractFields.test_16(188): Test +TestCasesExtractFields.test_17(194): Test +TestCasesExtractFields.test_18(200): Test +TestCasesExtractFields.test_19(206): Test +TestCasesExtractFields.test_20(212): Test +TestCasesExtractFields.test_23(218): Test +TestCasesExtractFields.test_24(224): Test +TestCasesExtractFields.test_25(230): Test +TestCasesExtractFields.test_26(236): Test +TestCasesExtractFields.test_27(242): Test +TestCasesExtractFields.test_28(253): Test +TestCasesExtractFields.test_29(262): Test +TestCasesExtractFields.test_30(273): Test +TestCasesExtractFields.test_31(282): Test +TestCasesExtractFields.test_32(300): Test +TestCasesExtractFields.test_33(312): Test +TestCasesExtractFields.test_34(323): Test +TestCasesExtractFields.test_35(340): Test +[INFO] Tests run: 35, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.652 s - in org.snpsift.tests.unit.TestCasesExtractFields +[INFO] Running org.snpsift.tests.unit.TestCasesFilter +TestCasesFilter.test_57_short_circuit_AND_OR_operators(1724): Test +TestCasesFilter.test_32_ann(988): Test +TestCasesFilter.test_33_ann(1049): Test +TestCasesFilter.test_34_ann(1108): Test +TestCasesFilter.test_35_ann(1167): Test +TestCasesFilter.test_01(40): Test +TestCasesFilter.test_02(64): Test +TestCasesFilter.test_03(86): Test +TestCasesFilter.test_04(110): Test +TestCasesFilter.test_05(134): Test +TestCasesFilter.test_06(158): Test +TestCasesFilter.test_07(182): Test +TestCasesFilter.test_08(208): Test +TestCasesFilter.test_09(236): Test +TestCasesFilter.test_10(258): Test +TestCasesFilter.test_11(281): Test +TestCasesFilter.test_12(303): Test +TestCasesFilter.test_13(326): Test +TestCasesFilter.test_14(348): Test +TestCasesFilter.test_15(381): Test +TestCasesFilter.test_16(407): Test +TestCasesFilter.test_17(435): Test +TestCasesFilter.test_18(459): Test +TestCasesFilter.test_19(483): Test +TestCasesFilter.test_20(507): Test +TestCasesFilter.test_21(532): Test +TestCasesFilter.test_22(559): Test +TestCasesFilter.test_23(615): Test +TestCasesFilter.test_24(642): Test +TestCasesFilter.test_25(669): Test +TestCasesFilter.test_26(697): Test +TestCasesFilter.test_27(748): Test +TestCasesFilter.test_28(846): Test +TestCasesFilter.test_29(875): Test +TestCasesFilter.test_30(903): Test +TestCasesFilter.test_31(932): Test +TestCasesFilter.test_32(960): Test +TestCasesFilter.test_33(1021): Test +TestCasesFilter.test_34(1081): Test +TestCasesFilter.test_35(1140): Test +TestCasesFilter.test_36(1198): Test +TestCasesFilter.test_37(1222): Test +TestCasesFilter.test_38(1247): Test +TestCasesFilter.test_39(1272): Test +TestCasesFilter.test_40(1295): Test +TestCasesFilter.test_41(1320): Test +TestCasesFilter.test_42(1356): Test +TestCasesFilter.test_43(1374): Test +TestCasesFilter.test_44(1392): Test +TestCasesFilter.test_45(1410): Test +TestCasesFilter.test_46(1437): Test +TestCasesFilter.test_47(1448): Test +TestCasesFilter.test_48(1459): Test +TestCasesFilter.test_49(1475): Test +TestCasesFilter.test_50(1494): Test +TestCasesFilter.test_51(1526): Test +TestCasesFilter.test_52(1560): Test +TestCasesFilter.test_53(1583): Test +TestCasesFilter.test_54(1605): Test +TestCasesFilter.test_55(1627): Test +TestCasesFilter.test_22_3(589): Test +TestCasesFilter.test_55_2(1647): Test +TestCasesFilter.test_55_3(1667): Test +TestCasesFilter.test_56_empty_vcf(1687): Test +TestCasesFilter.test_58_rmFilter_info_field(1747): Test +TestCasesFilter.test_27_ann2(812): Test +TestCasesFilter.test_26_ann(721): Test +TestCasesFilter.test_27_ann(778): Test +[INFO] Tests run: 68, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.205 s - in org.snpsift.tests.unit.TestCasesFilter +[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateTabix +TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test +TestCasesAnnotate.test_29_repeated_IDs(618): Test +TestCasesAnnotate.test_01(145): Test +TestCasesAnnotate.test_02(153): Test +TestCasesAnnotate.test_03(161): Test +TestCasesAnnotate.test_04(169): Test +TestCasesAnnotate.test_05(181): Test +TestCasesAnnotate.test_06(192): Test +TestCasesAnnotate.test_07(217): Test +TestCasesAnnotate.test_08(232): Test +TestCasesAnnotate.test_09(245): Test +TestCasesAnnotate.test_11(273): Test +TestCasesAnnotate.test_12(300): Test +TestCasesAnnotate.test_13(320): Test +TestCasesAnnotate.test_14(340): Test +TestCasesAnnotate.test_15(356): Test +TestCasesAnnotate.test_16(372): Test +TestCasesAnnotate.test_17(390): Test +TestCasesAnnotate.test_18(415): Test +TestCasesAnnotate.test_19(428): Test +TestCasesAnnotate.test_20(439): Test +TestCasesAnnotate.test_21(453): Test +TestCasesAnnotate.test_22(479): Test +TestCasesAnnotate.test_24(509): Test +TestCasesAnnotate.test_25(539): Test +TestCasesAnnotate.test_35(693): Test +TestCasesAnnotate.test_36(711): Test +TestCasesAnnotate.test_38(732): Test +TestCasesAnnotate.test_39(743): Test +TestCasesAnnotate.test_40(762): Test +TestCasesAnnotate.test_41(770): Test +TestCasesAnnotate.test_42(781): Test +TestCasesAnnotate.test_43(809): Test +TestCasesAnnotate.test_44(835): Test +TestCasesAnnotate.test_45(861): Test +TestCasesAnnotate.test_33_empty_db(665): Test +TestCasesAnnotate.test_26_repeat_db_entry(568): Test +TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test +TestCasesAnnotate.test_28_exists(596): Test +TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test +TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test +TestCasesAnnotate.test_27_repeat_db_entry(580): Test +[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 215.287 s - in org.snpsift.tests.unit.TestCasesAnnotateTabix +[INFO] Running org.snpsift.tests.unit.TestCasesPosIndex +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in org.snpsift.tests.unit.TestCasesPosIndex +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnLong +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 15.319 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnLong +[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateCreateIndex +TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test +TestCasesAnnotate.test_29_repeated_IDs(618): Test +TestCasesAnnotate.test_01(145): Test +TestCasesAnnotate.test_02(153): Test +TestCasesAnnotate.test_03(161): Test +TestCasesAnnotate.test_04(169): Test +TestCasesAnnotate.test_05(181): Test +TestCasesAnnotate.test_06(192): Test +TestCasesAnnotate.test_07(217): Test +TestCasesAnnotate.test_08(232): Test +TestCasesAnnotate.test_09(245): Test +TestCasesAnnotate.test_11(273): Test +TestCasesAnnotate.test_12(300): Test +TestCasesAnnotate.test_13(320): Test +TestCasesAnnotate.test_14(340): Test +TestCasesAnnotate.test_15(356): Test +TestCasesAnnotate.test_16(372): Test +TestCasesAnnotate.test_17(390): Test +TestCasesAnnotate.test_18(415): Test +TestCasesAnnotate.test_19(428): Test +TestCasesAnnotate.test_20(439): Test +TestCasesAnnotate.test_21(453): Test +TestCasesAnnotate.test_22(479): Test +TestCasesAnnotate.test_24(509): Test +TestCasesAnnotate.test_25(539): Test +TestCasesAnnotate.test_35(693): Test +TestCasesAnnotate.test_36(711): Test +TestCasesAnnotate.test_38(732): Test +TestCasesAnnotate.test_39(743): Test +TestCasesAnnotate.test_40(762): Test +TestCasesAnnotate.test_41(770): Test +TestCasesAnnotate.test_42(781): Test +TestCasesAnnotate.test_43(809): Test +TestCasesAnnotate.test_44(835): Test +TestCasesAnnotate.test_45(861): Test +TestCasesAnnotate.test_33_empty_db(665): Test +TestCasesAnnotate.test_26_repeat_db_entry(568): Test +TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test +TestCasesAnnotate.test_28_exists(596): Test +TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test +TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test +TestCasesAnnotate.test_27_repeat_db_entry(580): Test +[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 197.447 s - in org.snpsift.tests.unit.TestCasesAnnotateCreateIndex +[INFO] Running org.snpsift.tests.unit.TestCasesSplit +TestCasesSplit.test_01(28): Test +TestCasesSplit.test_02(58): Test +TestCasesSplit.test_03(84): Test +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.399 s - in org.snpsift.tests.unit.TestCasesSplit +[INFO] Running org.snpsift.tests.unit.TestCasesVarType +TestCasesVarType.test_05_multiple(82): Test +TestCasesVarType.test_01_SNP(58): Test +TestCasesVarType.test_02_MNP(64): Test +TestCasesVarType.test_03_INS(70): Test +TestCasesVarType.test_04_DEL(76): Test +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.371 s - in org.snpsift.tests.unit.TestCasesVarType +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameDel +DataFrame: DEL, size: 100, current index: 100, memory: 63.4 KB + Field types: + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + 0 130 | GACT | | G | null | -1436456258 | true | ZVMGTYMKSHHVG | null | null | | + 1 223 | CTGG | | X | null | null | false | NNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGU | null | null | PXBTJGJYGUPJF | + 2 545 | GTCG | | null | null | -1976073951 | false | QTLZADZBNDXVFRJHSDKMELBXLUSSYJ | null | 0.6940557826497827 | TLGZHNXJGLETAEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYE | + 3 1055 | AATGG | | E | null | -1010079021 | true | BOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGC | null | 0.8502834502384514 | FDXBCCKBLVOSVEUQFWTNZKBFUZYSRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOETZU | + 4 1446 | C | | T | null | 1403132403 | true | AUODCZNFMRXEWAMVAFWWRYGGOTPRSHRUNJEPJICSFDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXP | null | 0.39316353033715945 | FZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAA | + 5 1881 | TTGA | | T | null | null | false | TEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJCJOARSXBEQN | null | 0.13527063443116194 | RNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKGJWBPOXVODCKIZGLHJCVW | + 6 2563 | T | | T | null | null | false | UKJLUZTUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPOGDMTZPNIWMONL | null | 0.6240261637520885 | UFKFXCYZJXGYVICKOAMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFB | + 7 2947 | AAA | | B | null | 114930024 | false | FKUXNMTUYJPZYRUZCWFGZVEUUGMRBHYLGVDHQHETXOLCK | null | 0.07793307836710994 | EYMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVU | + 8 3347 | GTCT | | F | null | 845126422 | false | HEWEYJWJWQVRQKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJ | null | 0.6161471556789055 | DASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLAC | + 9 3983 | CTTCA | | Q | null | 468178437 | false | WQETIVGKEMLVCLMYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIV | null | 0.04108960045004717 | ZLCDFWYENCGBPHXSRWAOUSCYHUHU | + 10 4433 | GTAT | | O | null | 1130020054 | true | RYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLPAVTXNBSMPGICZ | null | 0.6382849215814441 | QMFXCKFYTNWGKENKRJLZXOP | + 11 4689 | TGC | | K | null | -445790332 | false | KBYZYNSNTPANSIGHYIAITLYHHFQBGATATIARJNANENEUPMRUWTMUTOOPMQNU | null | 0.7382253789492977 | MJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKK | + 12 5001 | GGG | | B | null | -1313067818 | true | RREBLEBHRQZRGEYWHCEBYNFJGRCAUIVMXQXRDXKNXIQFM | null | null | GYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYVCLDTIMJZUEMQPCYGQY | + 13 5198 | GGGTA | | Y | null | -1251908859 | false | SMSHLSHBDGHYGPIRBDKXCPUUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFT | null | 0.9167833442482675 | PFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDXXUOX | + 14 6041 | AT | | I | null | -6330919 | true | XGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQCNFNNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOVNOHLLTOINN | null | 0.3800326067140799 | KOXRNGJ | + 15 6581 | GGGG | | F | null | null | false | EDKUZSKCFJZPOWKBQYRYSGVHXBWNYGWXWV | null | 0.06012241070042468 | SFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRA | + 16 6936 | TTA | | A | null | 511856758 | false | YTWLRZOEZULNPISA | null | 0.896994305092103 | | + 17 7804 | GAACG | | F | null | -1272606888 | true | USOSSEKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMC | null | 0.7560910517289061 | CRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERP | + 18 8572 | TGG | | null | null | null | true | SNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQS | null | null | VPWIOXYXTHTYNYBDMMZVHXXWSJZQXNQOQTVATSQRUUCAK | + 19 8788 | AACGT | | O | null | 74880996 | false | MWLBJJADJNZBAVOBMTNXMJZATPEZATDQXXMYLARYBPGPAPLSOYBUKFPBAFIBSUFQU | null | 0.07910641251928785 | QREDBOCPCAQQYHVYMSZDYZ | + 20 9670 | TC | | U | null | -1276786925 | true | QO | null | 0.6263524583490568 | HZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDI | + 21 9827 | G | | R | null | null | true | TMUPXGOVUIDXQKLPRET | null | 0.018681289917958255 | WXBHOJWCYZUUUVSTMVQTOL | + 22 10693 | AC | | L | null | null | false | GVCFGVOADMYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJFXVP | null | 0.6111167283426931 | ZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQ | + 23 11663 | C | | S | null | -31088424 | true | VWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPN | null | 0.7531929524822482 | VRAGOTTXTCDDIXWJJSJYHEWHKXIGPL | + 24 12601 | GGCC | | Z | null | null | false | XPCVBJPSNJTEHOWCPZLVRQWDHOY | null | 0.31339935880017655 | YJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXL | + 25 13072 | AAC | | U | null | 1330843747 | true | GYMIELVHMRKLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPBUDSQGLOBMZVVFLNSWMQXUCJ | null | 0.4692113581027457 | NLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMU | + 26 13867 | GCC | | G | null | null | false | XP | null | 0.22199844675396851 | NZQEAQKWLSYJMMVQSQTSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTF | + 27 13962 | GAG | | L | null | 146571832 | null | MOPIMPXRLKAIE | null | 0.510346538643695 | FPGVRPBBCUZUTIRNMBZQIBPCTGQWJECWFMMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOIT | + 28 14288 | GTC | | H | null | 1548333524 | false | UXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPPNBVRPSISCUD | null | 0.07446599626789219 | NSDERCMAIXBNIQRIEMDHOQFQ | + 29 14851 | CC | | null | null | -1696167297 | null | HXJDPHXFJUVINTKURUNTGXBCRIYGMXGLYBFIHLNCHA | null | 0.0799845503474157 | WIMEDVXAMQMWWROUPEHPKRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJ | + 30 14999 | TGTTC | | Y | null | -522360497 | false | TLMHBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZSOSWWVMRPXNYNXLQTNZOAMMXFPMGJWHVBMIISK | null | 0.5344552293903443 | QQWZBPWGGGPCOYIRUODLHHZGLMBQAJLGCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVSUERWOAEHZWLS | + 31 15537 | GACGA | | S | null | -578434703 | false | OMZVWXWMONE | null | 0.8251475537214046 | BGIV | + 32 15731 | ATAC | | null | null | 400671947 | null | HTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZQAMTRPVRWF | null | 0.5579494955102167 | YIKDTO | + 33 15777 | GCT | | M | null | -319681430 | false | DSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJ | null | 0.3831246943809442 | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW | + 34 16236 | AACCC | | L | null | -1117096939 | true | COUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMY | null | 0.17249805940518959 | RSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXRGCNLDFIXNZUPCZBSDO | + 35 16372 | C | | W | null | 1179462312 | true | EZAYOPAVIWWDSBKGVIERZVVKW | null | 0.985450039923121 | FJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUYTHQCHTPHGWMYYPIWPAHZMSNEIIVXNKHDI | + 36 17216 | G | | N | null | -1055384584 | true | PSQQOQTKLV | null | 0.06566831133672113 | SVAQLBASZKUOAQXSZYHTFPESQNYFKQ | + 37 17785 | ACGCT | | null | null | -298680206 | false | COPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUO | null | 0.9217536754688332 | UYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYB | + 38 18277 | AA | | I | null | -863116862 | true | null | null | 0.5623763340669743 | JDTKELPQHQDIEBEXBHJFIMPP | + 39 18468 | AT | | N | null | 1924436227 | true | WCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRHFHNQ | null | 0.1749105387303984 | VRJUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKE | + 40 18910 | CCCCG | | Q | null | -2031335518 | false | LAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDP | null | 0.11273244680001182 | OPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDK | + 41 18931 | T | | W | null | 1899206506 | false | VGKGUNPFZAZQHYKIPFDMLTTAXEEGFQ | null | 0.4671423995923216 | RUGBQXLOOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCL | + 42 19089 | CC | | R | null | 1118819099 | false | DQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXC | null | 0.4478386559636307 | LWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNRRWSWPOQJYEQWTHBQXHRKWBEPZCHIAW | + 43 19894 | CCCTA | | N | null | -605014644 | false | null | null | 0.7303047459316435 | BPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXAD | + 44 20045 | ACGA | | C | null | null | false | WALBHBZSDNPAZQNUZCBTVECALPBVRYGCTNGWNEHDQFNZRIJLEGPLJGZK | null | 0.8179955180515363 | INSSHZSFLFTPMDXIFUGVSFLODMYZHILGJSYHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDM | + 45 20405 | CCTT | | Y | null | -1514625439 | true | JURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPKSCNVRUE | null | null | DVQTYZFJUUCLNKWXYBNONXNRMRDSFQOYVQPTTMGBOOHSFO | + 46 20912 | GGCA | | O | null | 1616307207 | false | null | null | null | VEDGKFHPAFTMIKDCKWPZQGZKFCTREWKRHVHNGEOUBUIDIWX | + 47 21794 | GCA | | T | null | -1227593025 | false | HTLQ | null | 0.2772271069547678 | ARBOCHEUDXOHXBODYUAK | + 48 22268 | CGAGT | | T | null | -284068841 | true | AVFTWIUOIHRTVRUYFU | null | 0.31929058625899376 | WXUAUUEGQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJO | + 49 23112 | GAAT | | K | null | null | false | MMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYPKJPUATVBR | null | null | OSJTUIFRSBDIILLCGQGDPFJVTKNEZBOQHXUGGGGXVAUPORVJZ | + 50 24097 | ATAGC | | I | null | -598926481 | true | VEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCYEASQAPHIVZCCVYKLU | null | 0.21927388862578912 | KLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGH | + 51 25083 | AC | | G | null | -293064464 | false | QDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCY | null | 0.747238647577231 | UZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQTZGEERZXKCHCR | + 52 25744 | CG | | E | null | -1360501385 | false | WKGGQCSTRTLHEEGLMSAWQ | null | 0.024172844226171386 | BAQBCZIHQFIGJUIQDVGBKH | + 53 26411 | G | | F | null | -1304874868 | false | BLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRL | null | 0.6860774121795407 | ASDAKTYBU | + 54 27081 | A | | W | null | -1161853101 | true | ZPSCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIE | null | 0.21385656542785914 | KVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQDLSFTT | + 55 27218 | CT | | O | null | -1894851746 | false | NHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGCJJCHZAJAJHIZFPZJVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJU | null | 0.6536096755688723 | KVJRPQASSROBWVZDJKOCRCYMTXUBTD | + 56 27282 | AGATT | | F | null | 884228440 | true | OBSMKUXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSM | null | 0.2686316223942542 | NTQKOCGCXSKCEDPKOLOTGKOBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCDAW | + 57 27641 | GGGGA | | T | null | 1676893454 | true | ZZIIIHFMWTOZMHCMXPF | null | 0.8439224234714445 | WCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDX | + 58 28077 | CGTG | | D | null | -1203020043 | false | AQJJKHDMASERCYWAWE | null | 0.710936431698637 | NQ | + 59 29035 | G | | Q | null | -609488607 | true | DSDUABTFOWDJHCNWEFLH | null | 0.911924838137379 | RQGBFWBJNIIFD | + 60 29911 | CT | | L | null | -2089153437 | false | GOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJBEALCXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIB | null | null | YAOLFVXWCCSCLZTPSWEZOISZ | + 61 30667 | CTT | | V | null | -1973450833 | true | null | null | 0.9012258507873285 | XHBDBIDKXPHFOTFRATSTVGMMNADVITT | + 62 31223 | AA | | K | null | -1755477375 | false | XKFCDSZTVBKMHRHBLGOAIHYNPLTFNBOQDFQOSGIMGDVIDDYSIARM | null | null | SWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRLBEQPW | + 63 31496 | TG | | Q | null | 1180677504 | false | XNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPH | null | 0.984760373484259 | PWYRVDDYVZKYHEGNPULBRVHWTPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJF | + 64 32187 | ATA | | S | null | -724345447 | true | BMFPHNELKLQQTKDBYWMMMLOMWDKEYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHU | null | 0.8850906678117744 | LPCQVYZEB | + 65 32391 | C | | L | null | -875561924 | true | UODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLL | null | 0.3715021908115971 | | + 66 32515 | GTAG | | I | null | -375267285 | false | OKWRVKHVYQCQKXUPYHKVOPSCJY | null | 0.5900730230722597 | GJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCKV | + 67 32590 | G | | Y | null | 1514413576 | true | EVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANBMVAX | null | 0.7341836835763552 | IJKMWIEKPDQQBBTBRGBKZFM | + 68 32667 | G | | T | null | 797572977 | false | PSXDXCZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJN | null | 0.5332105043498733 | null | + 69 32820 | A | | E | null | -415835914 | false | TNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFR | null | 0.1335174125223052 | VFIECDHCJEX | + 70 33205 | A | | M | null | 520142376 | true | KTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWS | null | 0.43211074741851097 | GQIGRWFRRQPOKVFNLUBIYFBAUNPDVYD | + 71 34069 | GGTC | | Q | null | 1433331585 | true | YPBSUHNQKRZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJA | null | null | KNLPUGLUZPEPQWRMMWVETGLEKPBVHLRZZCIVSXZRKBEOERVK | + 72 34819 | CG | | Q | null | -739082506 | true | null | null | null | IUBJHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVST | + 73 34912 | T | | D | null | -1883492175 | true | HXNORWCADYZZKOKNDIJQWVENOKRPELATYNBXBIXFN | null | 0.653882331978058 | VUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDIIS | + 74 35777 | TA | | D | null | -502617652 | true | NTTVCOQNLCWSMQUCHQQLSVPYLUIDGCGAOOIWYYNIQHONRK | null | 0.8711203219921168 | PCPEANBDLHYXXFKJMJVZNNVTYOGCLPAAEWFHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPV | + 75 36380 | ATTAC | | T | null | 1571795832 | false | ZC | null | null | DEOMBEYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJ | + 76 36754 | TC | | R | null | 1758196166 | true | TYHRYIKSBPMDLKYANUQQSBHHFNJMSBKHRYXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWF | null | 0.6417540860653896 | YBDENAEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQ | + 77 37602 | C | | V | null | 298122992 | true | WXGFKDELXIPNUBIQSXJ | null | null | L | + 78 38525 | AAGAA | | L | null | -1359626233 | true | ELTXVWYOGYCNFDSSXEVDGHUMRBM | null | 0.40993593188707933 | PDBXOVSQDYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWX | + 79 39068 | A | | C | null | 313119412 | null | MIINDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNS | null | 0.8811611289359326 | CUYVGZRUCWQPBGBNWRLKDJ | + 80 39391 | TG | | P | null | 387521435 | true | YHDULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAPDDYSLBHDYOEYF | null | null | JNTHMLQTYJURK | + 81 39810 | ACA | | C | null | 1317623748 | false | DQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXI | null | 0.027280066900205235 | VNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNVOZY | + 82 40464 | CTA | | U | null | 1991019784 | false | SXFJCAXCGZKZKGXUYPFWXONPKQUQOCSOLGKFDASKPMDBASJYUSZRTKHCHMKEYI | null | 0.5232752681520697 | FSHJFAUVMFOZYUDRXIVXGAVYBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFWSDUVNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLV | + 83 41358 | G | | O | null | -2110428431 | false | CGAZOEWAOGVKFINKYIWQ | null | 0.03010634590247585 | TZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQLGWRORVMYYKPYAMAZCXGYJC | + 84 41616 | TGCC | | E | null | 653352657 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.08956523678408113 | QTH | + 85 42111 | GGCA | | C | null | 930835808 | false | CSZJSNBGPIFIBAHZYTPMRBM | null | 0.47953341288935725 | OCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSO | + 86 42781 | CGCTC | | U | null | 55021129 | false | SXUNGJITKBVEEPVVKXCSIXIBPDC | null | 0.5073404006748695 | IAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFFAYFMRF | + 87 43117 | GGC | | J | null | 261156548 | true | IDFWSGDLLYEDQGNLLGTKZUZKDQYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJO | null | 0.37878537991521044 | FLHZAHXAQFYBZVVKGXESMQRCAXY | + 88 43943 | ATTC | | I | null | null | true | LONOYSMVTAGLUXLTSFSUXWPAZCGDEZLOURIYYLWILVSA | null | 0.2964646286340923 | null | + 89 44547 | TGGGC | | null | null | null | true | IOTQNACNSNCHTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWLGGNHMAZQXNOKCAAFLMKMAPJWDQ | null | 0.457479396913271 | HMBXLWGDWVBAGMPTPSDIRXOPHWHAEEWOYVMXSL | + 90 44874 | CTCA | | U | null | null | true | VCSKRHFAOHYQEROWK | null | 0.4893857531586706 | YWNTPMJUZMHOMCUHBNTWZFLRLF | + 91 45789 | T | | V | null | null | true | ITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYRE | null | null | PBMUTRLSEYOQUBOR | + 92 46656 | GAGC | | K | null | -682714045 | false | NJIVKSVNASIVIN | null | 0.21036323577585736 | IREOPSNYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJKZFBXWMPOBPUCQYYNYRBIIEWXCXDOUIHQBODOZVZ | + 93 47481 | G | | J | null | 2004630449 | true | HIIRGLTWABTAHOQZHIYVYWSNZY | null | 0.19726006900984927 | HROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCIOHYERXDZFDWPGMMPWASXLF | + 94 48439 | C | | N | null | -986666946 | null | ZMKACPDAVPUPUFOKMOHRRYEWXXYNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZAUQLGKFGNIUNT | null | 0.5498634898012835 | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | + 95 48708 | CCA | | S | null | -907643995 | false | RQZFIVYJCJCARHWGLTWGVOVBBSKLO | null | 0.8043326769484491 | RBIEZVEAOMG | + 96 49276 | TG | | P | null | -2066998677 | null | I | null | 0.7177010134014864 | JXODFUCNQJPJJQLSMLNNQFYI | + 97 49401 | CGG | | B | null | -257772742 | true | TNFMNZYQCDRJILYWMZAJHDQZTNWQQYFRYGYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEHBWLJAJASVDEOF | null | 0.4607268875015176 | null | + 98 49907 | CAC | | P | null | 966658647 | true | KGDJSHWQNTLSEYGZ | null | 0.6885368220839251 | GTPFQOWDDNZNFTEUCOAEOMVYXBUMZTNLV | + 99 50128 | CA | | E | null | 128095220 | false | NUJYTDVTSDBWKWGYBDKAHAQERJYIGNHYAUFUMIMLNOFPVQJAFDXGIRWIXOBXA | null | 0.4811475357641687 | ZGKNAOXKXJTBFDIJHRUHLXSCTNALYGQVYKSHPRPBNLLZYRIMNEOBUKWLLZRFRXCBJ | + +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.083 s - in org.snpsift.tests.unit.TestCasesDataFrameDel +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameMnp +DataFrame: MNP, size: 100, current index: 100, memory: 63.4 KB + Field types: + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + ##INFO= + 0 130 | GACTC | ATGCT | G | null | -346484495 | false | QZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPL | null | 0.43979982659080874 | VGLPKFFVDPCDVBXJS | + 1 800 | CCA | GAT | S | null | 734084664 | false | YGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYEMFMQTLZADZBNDXVF | null | 0.6279332754134727 | XNTLWTQRTLGZHNXJGLETAEGILYUTDVAIF | + 2 1259 | TC | GT | S | null | null | false | SRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTD | null | 0.8556303199441717 | IFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBF | + 3 1947 | AGAAA | GCGTC | F | null | -135854320 | true | HAYYLXAIMKCTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAAKWGAU | null | null | | + 4 2673 | TC | CG | F | null | -288299077 | true | null | null | 0.7278040889330866 | TPRSHRUNJEPJIC | + 5 3562 | AGGTTA | GATAGC | U | null | 162252886 | true | BUTZYQGKGJWBPOXVODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJ | null | 0.028750514440683772 | AMKDDPVNZURFTUUMHFZGRNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHAR | + 6 4158 | CCTCCC | GAGAAT | B | null | -304213835 | false | MFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTU | null | 0.04102447110373153 | SHHXQXSIOOTQBYAMZRFKJCJOARSXBEQNWBEYBTRLLBJTOPXYAVBUFKFXCYZJXGYVIC | + 7 4279 | CC | GG | X | null | 256660382 | false | MONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEO | null | 0.19109407573087445 | ASEUGGPSBVAVQAISGEPOGDMTZP | + 8 4676 | TTCTA | GATCC | R | null | -759679086 | false | HYLGVDHQHETXOLC | null | 0.36492146475814047 | VEUUG | + 9 5500 | AG | TC | O | null | -1679979548 | false | QKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUCMTSWCUNQIYBBUBAZLCDFWYENCGBPHX | null | 0.8750558587334625 | CDASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJW | + 10 5518 | CAGCA | ACAAT | G | null | -886012130 | false | VHQMFXCKFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLP | null | 0.9484603601700132 | MYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZT | + 11 5728 | ACGC | GTCA | Y | null | -1245654784 | false | IAAHSWFGVIBKKGFWKBYZYNSNTPANSIGHYIAITLYHHFQBGATATIA | null | 0.7194449346355324 | IKEXJRDMJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZ | + 12 6459 | CCG | AGA | null | null | -129760917 | false | BYNFJGRC | null | 0.5882172034343477 | GIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYVCLDTIMJZUEMQPCYGQYRZLRREBLEBHRQZRGEYW | + 13 6889 | AGCGC | CCAAG | P | null | 1620772052 | true | null | null | 0.35351188686690904 | FUCMTYDAXAWLEPFSOPHVFZUEFDEJ | + 14 7834 | AA | CT | null | null | 335155552 | false | null | null | 0.4086730063619384 | null | + 15 8137 | CTAG | TCCT | D | null | 690281034 | true | HBLPLKJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQC | null | 0.4844370393511812 | UBSELUPRB | + 16 9084 | TT | AA | C | null | 917754666 | false | XDMDFINZHSRJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRABIWE | null | 0.6487816358956248 | SWJIIPEMJKSOVNOHLLTOINNESNDAMN | + 17 9409 | GCCT | TGAC | null | null | null | false | SFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUSOS | null | 0.5577468336431636 | WNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJS | + 18 10001 | TGCACA | ATAGTG | T | null | -1515629276 | null | null | null | null | VSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXT | + 19 10311 | GTGT | ACTG | Q | null | -1617046473 | true | YHVYMSZDYZLGDMWL | null | 0.9831828393010831 | UUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDBOCPC | + 20 11068 | GT | CG | N | null | 509578579 | null | UKFPBAFIBSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJS | null | 0.7785962769003004 | TPEZATDQXXMYLARYBPGPAPLS | + 21 11174 | TGCTCT | AAACTA | P | null | 921144451 | false | WOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUU | null | 0.9123421937562539 | R | + 22 11571 | CTAG | TCCT | D | null | 1718949627 | false | MYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJFX | null | 0.46673104389165376 | TYPTCCKIUXDNSLHWUDRUSZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQRLQGVCFGV | + 23 12078 | CCCT | TTTC | O | null | -1384192067 | false | NJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCSMNEYJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXLDNNXPCVBJPSNJTEH | null | 0.26815358468775163 | XTCDDIXWJJSJYHEWHKXIGPLGGEVWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEO | + 24 12254 | TCAC | GGTT | null | null | -438374424 | true | null | null | 0.14673592424180915 | AHUDG | + 25 12349 | ATCAT | CGGTA | H | null | 758453846 | true | KLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPB | null | 0.2292387309942473 | YYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGGYMIELV | + 26 13123 | CCC | GAT | X | null | -1001450513 | true | JSK | null | 0.2696122012937159 | BHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMVQSQTSRSIRDVTNMTRXPB | + 27 13770 | TGAT | GATG | null | null | 2005789910 | true | PWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQWJECWFMMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOITFCV | null | null | XP | + 28 14344 | ACG | TAT | P | null | 1199993081 | true | FQNJQUXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHA | null | 0.5103393097757357 | GVHHLJEBZYNSDERCMAIXBNIQRIEMD | + 29 14756 | TGAC | CTTT | N | null | -1804611253 | false | LGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJUVINT | null | 0.7827166701418667 | CUDRTBUEEBJFHEBUIHMNHWIMEDVXAMQMWWROUPEHPKRI | + 30 15508 | GAAT | CGTG | H | null | 1220755583 | false | MBQAJLGCZOUMEVVTADJIMOLIX | null | 0.5501110077087921 | TOBMXBPTXHXONSYUZUFENSQQWZBPWGGGPCOYIRUODLHH | + 31 16240 | AGGAA | CACGG | U | null | 559197251 | true | HBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJ | null | 0.4097318407654317 | RFLVSUERWOAEHZWLSQJA | + 32 16358 | GGTA | CAGT | null | null | null | true | QBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOPVYHTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZ | null | 0.9780981106199931 | NXLQTNZOAMMXFPMGJWHVBMIISKYUETNMSZMQMOXJFESSUV | + 33 16976 | AAACAC | TCCGCT | M | null | -319681430 | false | DSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJ | null | 0.3831246943809442 | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW | + 34 17435 | AACCCT | GGTTAA | R | null | -2051070316 | true | LDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJ | null | 0.8501062151834663 | XGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXR | + 35 18205 | AATAT | CCACA | R | null | -1016853906 | false | RQQLRESQTQPMYWUYTHQCHTPHGWMYYPIWPAHZMSNEIIVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQM | null | 0.1252305846603955 | YAZDFJJHTKRYJFYFQLAKZUSSPYAPSWB | + 36 18671 | CTAA | ACCT | A | null | 312433305 | true | QXSZYHTFPESQNYFKQEPAPSQQOQTKLVFPHTXHKJQVYAMKHLOWPTSYXUYRRGGG | null | 0.7732929039471246 | | + 37 18815 | AGGT | TCCC | H | null | -192126094 | true | FDEFEAIUVTSP | null | 0.6687744242493339 | CZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQ | + 38 18990 | CCTCC | TTGAG | L | null | 1338557204 | false | KEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRHFHNQMBPQZMVYTJOPTTGRQOOBAXHWOPEORODIVFVMHWOXPGIWSRG | null | null | ZTXKZAMMIUSGJPTSJDTKELPQHQDIEBEXBHJFIMPPDVZXFSSIZVMSEVENLFRCLOJVRJUUTROOOTNOWPKPFZRWZGJGDREVYFY | + 39 19649 | CCTTAT | TTAGGG | R | null | -845218447 | true | AVLQKIFL | null | 0.7741583228840283 | CGXHLBHRLBCINDKYLGDKTYCLAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERA | + 40 20607 | GCCAT | TGTCA | K | null | -45025817 | true | YHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCLAUMVGKGUNPFZAZQHYKIPFDMLTTAXEEGFQGXLBBH | null | 0.9691373737772555 | XUKJDPVJPSOBEOLCFOWQUAECVTRUGBQXLOOIN | + 41 21156 | GCCGCA | CGTATG | W | null | -1243561189 | true | SMRUPT | null | 0.4429926847541722 | SYPRLU | + 42 21806 | TA | AC | null | null | 1735497575 | false | null | null | 0.0394328659741473 | null | + 43 21839 | AG | TA | B | null | -865651518 | true | QFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNCFTYYJLZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXUL | null | 0.5871949292573951 | EPZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTH | + 44 22489 | CGATCT | TCGGTC | P | null | 330394861 | false | FFXUWDNIYWXADIYLUONTQMETNMCPYCWDFLSHSINSSHZSF | null | 0.2997445310722515 | | + 45 23072 | GTTGGG | CCAAAA | Y | null | -502033321 | true | NUZCBT | null | 0.43276042129899417 | LQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNP | + 46 23295 | GGCCG | AAGAC | Z | null | -1518612753 | null | null | null | 0.6671145728647582 | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO | + 47 23898 | TCAA | AGGG | O | null | 448265666 | false | GIUWTXHUDCOQYZFPZLVEDGKFHPAFTMIKDCK | null | 0.24165067951893648 | JURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPKSCNVRUE | + 48 24196 | AAGA | CCCT | G | null | 1626222045 | true | UDXOHXBODYUAKYGAHTLQELXYTJ | null | 0.32903298056413266 | IWXCNWIISITBTVMNPAYTHIPNCKCARBO | + 49 25181 | GTGG | CGTT | E | null | -1426293938 | true | IUOIHRTVRUYFUACKZH | null | null | GQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHKAV | + 50 25974 | GA | TG | S | null | 1729122195 | null | AUPORVJZTOJMMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYP | null | 0.20879455011120462 | RSBDIILLCGQGDPFJVTKNEZBOQHXUGGG | + 51 26128 | GGAC | CTGA | S | null | -2107939295 | true | GDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDD | null | 0.3465217480145627 | GISAKLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXY | + 52 26948 | GTTC | CGCT | I | null | 874276164 | false | null | null | 0.8700358952315721 | LUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCI | + 53 27123 | GAGTTG | TTCGGA | C | null | -1626430403 | false | OOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIVJGFPE | null | 0.4907299787684579 | ZPZQRZIACBFBDNF | + 54 27200 | TCCC | AGTG | null | null | 1628916152 | true | DAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRL | null | 0.20887152037949375 | IBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFERFVNVUBW | + 55 27870 | AT | CG | P | null | 918507005 | false | NSPEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFL | null | 0.7860384613677455 | THEUQCNVKQSNISLICNKDKOMR | + 56 28608 | GTT | AGG | null | null | 1578678272 | true | PVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGC | null | 0.6304197165537765 | MZPSCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZ | + 57 29523 | GGTG | TTCT | F | null | null | false | GCXSKCEDPKOLOTGKOBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCD | null | 0.8901803045759502 | PETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZKKCJCLUBGMVFISLNJICNTQ | + 58 29759 | CTAC | TGCG | F | null | 1755390814 | true | EUPCXSMJBZ | null | 0.10399455024155924 | OECXQBGSKUSCEPQAOEVABQVGYCHU | + 59 30240 | GAGC | CGTA | J | null | 245805235 | false | WQCTHQNXHDVMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBFWBJNI | null | 0.4726267810717161 | XQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXVZZIIIHFMWTOZMHCMXPFIOF | + 60 30670 | GTACTT | TAGGGA | S | null | 944514871 | true | CXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVEEFBCTJXH | null | 0.9717077606324023 | LDLEYBCIQCYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJB | + 61 30689 | GCGG | TATA | M | null | -2073219890 | true | CUBYQEBQREDVKQVRWCEFSWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCTNNB | null | 0.9472471024440868 | null | + 62 30947 | GTC | AAA | I | null | -667972054 | true | JEAODATZBRRLBEQPWOKOXK | null | null | F | + 63 31496 | TACC | ACTT | null | null | -1153848742 | false | WXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKE | null | 0.3776459242637572 | BOQDFQOSGIMGDVIDDYSIARMFNRXIDQWTWJFLQPICWLAKPWYRVDDYVZKYHEGNPULBRVHWTPPXLDCEUJVNDMTNWIV | + 64 31944 | TCTA | GGCG | B | null | 486774086 | false | PXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZ | null | 0.3695467993106807 | QDSIHADOFZLPCQVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWDKEYBUT | + 65 32434 | GGAAGG | ACCTCT | H | null | 1595589726 | false | IMHNAJEWWRVWIZSGQPVZGJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCK | null | 0.1196230872144961 | UODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLL | + 66 33205 | CG | GT | Q | null | -54864998 | false | MCMBEVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANB | null | null | HKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRGB | + 67 33771 | TGCCGC | ACTGAA | J | null | -899793151 | false | XHGUEQLVFIECDHCJEXBPZTNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFRVIOUHAVSYGXMMWZEJTKL | null | 0.1905641263105804 | ZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCB | + 68 34741 | TGATT | CAGAG | F | null | -1225579561 | true | CCUOEWSCGDK | null | 0.881650195389698 | YDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVT | + 69 35499 | CT | AG | K | null | -276395645 | false | null | null | 0.977751537018833 | ZPEPQWRMMWVETGLEKPBV | + 70 35546 | AT | CG | null | null | 2040100435 | true | ZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPN | null | 0.09037104358084358 | BSUHN | + 71 36433 | GGCT | ATGC | C | null | 168413364 | true | null | null | 0.1904413360563667 | JHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVSTFH | + 72 37416 | CG | TC | M | null | 1814030146 | true | DIISR | null | 0.27648269722880425 | JWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHH | + 73 38285 | AGC | TTA | D | null | -804208911 | null | OKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEP | null | 0.9198539785480527 | null | + 74 38361 | GCTGAC | AAACCT | G | null | null | false | SVPYLUIDGCGAOOIWYYNIQHONRKHLCUIXZZIYXHYQTEPKZ | null | 0.9186628435199452 | FHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPVYKONTTVCOQNLCWSMQUCH | + 75 38632 | CCTAGC | TAGGTT | J | null | -1928769563 | false | ZC | null | 0.12015177706912317 | PRCYFYRJ | + 76 39006 | TCG | ATC | S | null | -1435537229 | true | VSZPXVTNOEXWQQVTGTYHRY | null | 0.10825272757712423 | AEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTIDOMJAM | + 77 39326 | CTGG | GCCC | N | null | 1238244676 | false | RPGGYYEALD | null | 0.41559312842378404 | YXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZ | + 78 39616 | AT | GC | P | null | 193791099 | false | YTCT | null | 0.2178404304349859 | PFDYCFBWFIJOYSGWEIOFGIU | + 79 40139 | TGTAGT | CAGGTA | F | null | 928401180 | true | null | null | 0.4941678716122485 | GHUMR | + 80 40682 | AC | GA | null | null | -510409048 | false | GMJQZLJFYKYFBXNSVJTLWNHBEUMPEFUCIPJJNTHMLQTYJURKMRXYHDULOETRHFDJWPUVXZZYK | null | 0.6826290896912366 | GZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHX | + 81 40844 | GTTTC | CGCCG | M | null | 838024760 | true | UVO | null | 0.5626054761915171 | FDZCXTCGTGQRTIAPDDYSLBHDYOEYFHHKORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJL | + 82 41772 | TT | CG | null | null | -1963423867 | false | ZWMWLJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCM | null | 0.06821448380998862 | null | + 83 42405 | GGAGAT | CCGAGA | null | null | 599980869 | true | SVREX | null | 0.557000574778266 | BCCVLDOBFFIBXIWYNWPONALNRDOUUIZOZANCFSHJFAUVMFOZYUDRXIVXGAV | + 84 42798 | AAAT | CCTC | W | null | -433896788 | true | NNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURG | null | 0.8086382761333594 | null | + 85 43166 | TCCTT | GTGCG | P | null | -212160676 | false | DASKPMDBASJYUSZRTKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQ | null | 0.4004611468446073 | OL | + 86 43893 | TCAA | ATCG | A | null | -1842380129 | true | ALSCGAZOEWAOGVKFINKY | null | 0.6941442078114862 | null | + 87 44799 | CTATG | AATGA | C | null | 1518735330 | false | TEGAXQHZZKHNCPGXUCFAOCDFSUNIOOVESGTIPFVKUARMU | null | 0.035089348611912374 | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | + 88 44980 | ACACG | GGGGT | A | null | -1094185683 | true | DFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFF | null | 0.39624910302016625 | SOPTTCSZJSNBGPIFIBAHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIA | + 89 45514 | CTAGGG | GCTATT | C | null | 829369797 | true | FYBZVVKGXESMQRCAXYFQXIDFWSGDLLYEDQGNLLGTKZUZKDQYKPUXKE | null | 0.06802209908917545 | CIIEIJGPIYRYOKKJGWQFGMJFLHZAH | + 90 46164 | CTT | TGC | M | null | -814452473 | false | YGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJOCHYNCBMNZGHZDQIJCWDWAXBELONOYSMVTAGLUXLTSFSUXWPAZ | null | 0.7938675906527775 | | + 91 46724 | TTATGC | GGTAAA | P | null | 1882730814 | true | PTPSDIRXOPHWHAEEWOYVMXSLFZPIOTQNACNSNCHTLNYRRGIOERSJAEXC | null | 0.37844740748624583 | XIXGKFSRYQHMBXLWGDWVB | + 92 46735 | GACGC | TCTTG | G | null | 575014296 | false | OMCUHBNTWZFLRLFXDZVCSKRHFAO | null | 0.5133194346909566 | XNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJU | + 93 47404 | GACG | TTGA | V | null | 681339300 | true | ITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYRE | null | null | PBMUTRLSEYOQUBOR | + 94 48271 | GAGCG | TTTAT | Z | null | 300539013 | true | null | null | 0.936695453283102 | YURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJK | + 95 48812 | CT | GG | B | null | -538906411 | false | ERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHO | null | 0.7202708244462117 | DOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCI | + 96 49292 | TGGT | CACG | P | null | 2113525344 | false | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | null | null | null | + 97 49663 | TTCTA | GGTAG | H | null | -1954124469 | false | GKFGNIUNTJWMMJQHSKQ | null | null | YNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZA | + 98 49944 | TAAC | CGCA | G | null | -1858433447 | true | RVKVELGN | null | 0.8010342281968461 | IVYJCJCARHWGLTWGVOVBBSKLOOZKHCWJZYEZKSPMSDXYJXODFUCNQJPJJQLSMLNNQFYIWKZIB | + 99 50194 | CTT | TAC | Y | null | -944159107 | true | QYFRYGYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEHBWLJAJASVDEOFQVPOEGNJ | null | 0.06701482985829554 | YWMZAJHDQZT | + +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 s - in org.snpsift.tests.unit.TestCasesDataFrameMnp [INFO] Running org.snpsift.tests.unit.TestCasesDataFrameSnp DataFrame: SNP_A, size: 100, current index: 100, memory: 63.4 KB Field types: @@ -2876,17 +3471,72 @@ 98 47093 | C | T | E | null | 653352657 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.08956523678408113 | QTH | 99 47588 | C | T | Z | null | 1873761820 | false | YNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVR | null | 0.9680541190017328 | UCFAOCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPIFIBAHZYTPM | -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.091 s - in org.snpsift.tests.unit.TestCasesDataFrameSnp -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnChar -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.886 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnChar -[INFO] Running org.snpsift.tests.unit.TestCasesHwe -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.022 s - in org.snpsift.tests.unit.TestCasesHwe -[INFO] Running org.snpsift.tests.unit.TestCasesFilterALL -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.068 s - in org.snpsift.tests.unit.TestCasesFilterALL -[INFO] Running org.snpsift.tests.unit.TestCasesLd -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.tests.unit.TestCasesLd -[INFO] Running org.snpsift.tests.unit.TestCasesBoolArray -[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.549 s - in org.snpsift.tests.unit.TestCasesBoolArray +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.189 s - in org.snpsift.tests.unit.TestCasesDataFrameSnp +[INFO] Running org.snpsift.tests.unit.TestCasesVcfCheck +TestCasesVcfCheck.test_01(18): Test +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.tests.unit.TestCasesVcfCheck +[INFO] Running org.snpsift.tests.unit.TestCasesIntervals +TestCasesIntervals.test_01(25): Test +TestCasesIntervals.test_02(50): Test +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in org.snpsift.tests.unit.TestCasesIntervals +[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateMem +TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test +TestCasesAnnotate.test_29_repeated_IDs(618): Test +TestCasesAnnotate.test_01(145): Test +TestCasesAnnotate.test_02(153): Test +TestCasesAnnotate.test_03(161): Test +TestCasesAnnotate.test_04(169): Test +TestCasesAnnotate.test_05(181): Test +TestCasesAnnotate.test_06(192): Test +TestCasesAnnotate.test_07(217): Test +TestCasesAnnotate.test_08(232): Test +TestCasesAnnotate.test_09(245): Test +TestCasesAnnotate.test_11(273): Test +TestCasesAnnotate.test_12(300): Test +TestCasesAnnotate.test_13(320): Test +TestCasesAnnotate.test_14(340): Test +TestCasesAnnotate.test_15(356): Test +TestCasesAnnotate.test_16(372): Test +TestCasesAnnotate.test_17(390): Test +TestCasesAnnotate.test_18(415): Test +TestCasesAnnotate.test_19(428): Test +TestCasesAnnotate.test_20(439): Test +TestCasesAnnotate.test_21(453): Test +TestCasesAnnotate.test_22(479): Test +TestCasesAnnotate.test_24(509): Test +TestCasesAnnotate.test_25(539): Test +TestCasesAnnotate.test_35(693): Test +TestCasesAnnotate.test_36(711): Test +TestCasesAnnotate.test_38(732): Test +TestCasesAnnotate.test_39(743): Test +TestCasesAnnotate.test_40(762): Test +TestCasesAnnotate.test_41(770): Test +TestCasesAnnotate.test_42(781): Test +TestCasesAnnotate.test_43(809): Test +TestCasesAnnotate.test_44(835): Test +TestCasesAnnotate.test_45(861): Test +TestCasesAnnotate.test_33_empty_db(665): Test +TestCasesAnnotate.test_26_repeat_db_entry(568): Test +TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test +TestCasesAnnotate.test_28_exists(596): Test +TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test +TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test +TestCasesAnnotate.test_27_repeat_db_entry(580): Test +[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 147.186 s - in org.snpsift.tests.unit.TestCasesAnnotateMem +[INFO] Running org.snpsift.tests.unit.TestCasesConcordance +TestCasesConcordance.test_01(68): Test +TestCasesConcordance.test_02(74): Test +TestCasesConcordance.test_03(80): Test +TestCasesConcordance.test_04(91): Test +TestCasesConcordance.test_05(102): Test +TestCasesConcordance.test_06(113): Test +TestCasesConcordance.test_07(125): Test +TestCasesConcordance.test_08(131): Test +TestCasesConcordance.test_09(142): Test +TestCasesConcordance.test_10(153): Test +TestCasesConcordance.test_11(164): Test +TestCasesConcordance.test_12(181): Test +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.488 s - in org.snpsift.tests.unit.TestCasesConcordance [INFO] Running org.snpsift.tests.unit.TestCasesDataFrameIns DataFrame: INS, size: 100, current index: 100, memory: 63.4 KB Field types: @@ -2999,346 +3649,15 @@ 98 52327 | | ATCAGG | K | null | null | false | UBYREHOBNQZAXRCSAFUCKBVTXSFZIREOPSNYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJKZFB | null | 0.5758661835439116 | JHJMNUZVVGBGRNL | 99 52862 | | TCGGGA | I | null | -1934920832 | false | OHYE | null | 0.6240226122495972 | UIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFG | -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in org.snpsift.tests.unit.TestCasesDataFrameIns -[INFO] Running org.snpsift.tests.unit.TestCasesVariantDatabase -1 1000 . A T . . ZZZ_FIELD_FLOAT=3.14;ZZZ_FIELD_STRING=Value1;ZZZ_FIELD_FLAG=false;ZZZ_FIELD_INT=123 -[ZZZ_FIELD_FLOAT, ZZZ_FIELD_FLAG, ZZZ_FIELD_INT, ZZZ_FIELD_STRING] -[FIELD_FLOAT, FIELD_STRING, FIELD_FLAG, FIELD_INT] -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.021 s - in org.snpsift.tests.unit.TestCasesVariantDatabase -[INFO] Running org.snpsift.tests.unit.TestCasesVariantTypeCounter -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.snpsift.tests.unit.TestCasesVariantTypeCounter -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameMixed -DataFrame: MIXED, size: 100, current index: 100, memory: 63.4 KB - Field types: - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - 0 130 | GACTC | ATGCTTTTACC | H | null | 1660292060 | true | VGUIHFQWUSYUOXQVRXNTLWTQRTLGZHNXJGLETAEGILYUTDVAIFEOZYGHKA | null | 0.1505474834792303 | FVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPLWOJYB | - 1 719 | AA | TTTCATAC | D | null | null | false | null | null | 0.2821982861306481 | null | - 2 1667 | GGCGTG | ACG | N | null | null | true | KT | null | 0.6610508916166571 | MFMQTLZADZBNDXVFRJHSDKMELBXLUSSYJWTCQVIFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBFUZYSR | - 3 2408 | GCGG | TGA | X | null | -926287273 | false | ETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGCXHAYYLXAIMKCTVQNSDPJFZM | null | 0.6053218598587271 | CTXUKSW | - 4 2905 | CAGGA | TGTC | C | null | -2110639781 | false | BKSLLDJGZKGHDVQLAAK | null | 0.0987491349432944 | LUYOJPARNUOSX | - 5 3569 | TACATC | GGTTA | Y | null | -1619827948 | true | FDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXPLIAMKDDP | null | 0.6958254788801048 | HRUNJEPJ | - 6 3942 | AGG | GC | E | null | 1759468634 | true | POXVODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQ | null | 0.31191986699310315 | GKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKG | - 7 4309 | GCGT | TGTGGA | B | null | 1001974229 | false | AMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTUDNVRJBQ | null | 0.9430161143370018 | OPXYAVBUFKFXCYZJXGYVI | - 8 5266 | CCA | GGCC | G | null | -1921530556 | true | GOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWY | null | 0.4442576436641098 | QAISGEPOGDMTZPNIWMONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOMBUUTBXWQKI | - 9 5514 | TAG | CC | R | null | -759679086 | false | HYLGVDHQHETXOLC | null | 0.36492146475814047 | VEUUG | - 10 6338 | AG | CTCG | M | null | -536631031 | false | FHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUC | null | 0.6880295632898734 | SCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJWQVRQ | - 11 6556 | GACGG | TCGATA | Y | null | -1809889978 | false | null | null | null | XSRWAOUSCYHUHUBGDWQETIVGKEMLVCL | - 12 7530 | GCCTC | TTTA | F | null | 125900821 | false | KFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAE | null | 0.040427108343605966 | WLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZTPWRVHQM | - 13 7848 | GCTTTT | TGAA | V | null | 552048597 | false | null | null | 0.2229941719444838 | GIC | - 14 8230 | GC | ATC | X | null | -1901567179 | false | AITLYHHFQB | null | 0.9281005456025566 | LOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKKGFWKBYZYNSNTPANSIG | - 15 9168 | CGGG | GTCCG | U | null | -1414511684 | true | TIMJZ | null | null | PMQNUGIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYV | - 16 9658 | ACG | TGCCC | H | null | -192898018 | true | null | null | 0.4896099581558816 | WHCEBYNFJGRCAUIVMXQXRDXKNXIQFMHOCPKFQIYOKFUCMTYDAXAWLEPFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDX | - 17 10210 | CTCT | GCT | I | null | -374215497 | false | QABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGF | null | 0.16071858764042235 | UUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFTBCOGQ | - 18 10777 | AGAA | CAGCT | O | null | 779853740 | false | RJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRAB | null | 0.792349918144592 | XGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFIN | - 19 11693 | ACTGCC | TGAC | null | null | null | false | SFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUSOS | null | 0.5577468336431636 | WNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJS | - 20 12285 | TGCACA | CA | V | null | null | true | VSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXT | null | 0.6271643404105325 | null | - 21 12310 | ACGTGT | CTTG | Q | null | -1617046473 | true | YHVYMSZDYZLGDMWL | null | 0.9831828393010831 | UUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDBOCPC | - 22 13067 | GT | AAAACT | null | null | -1111392265 | null | LPNFFRJWMCUWIXPNTHHZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOV | null | 0.6293056149475463 | TDQXXMYLARYBPGPAPLSOYBUKFPBAFIBSUFQU | - 23 13721 | CCTTC | GGC | I | null | -479647117 | true | null | null | 0.975556283988524 | IANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUUVSTM | - 24 14152 | TTCCTC | CCG | P | null | 446527421 | false | IUXDNSLHWUDRUSZUWXBVOU | null | 0.7515769772774136 | null | - 25 14934 | GAG | ACCC | L | null | null | false | PVRSRMKLUCGTCFRDYIDIJFXVPQAKHPQEWWNHVSQLOTM | null | 0.5907961912348977 | JNJFGBQRLQGVCFGVOADMYOHSRX | - 26 15751 | TA | CCT | J | null | 1599579110 | true | PLGGEVWJSEISSN | null | 0.4264956752414417 | HK | - 27 16453 | GGG | CC | Q | null | 167756937 | false | YPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCS | null | 0.07643741004951432 | | - 28 16633 | GG | CTCA | H | null | -1598495659 | true | MJNIGBCJUBZXLDNNXPCVBJPSNJTEHOWCPZLVRQWDHOYTRBOKNAZOGGLAHUDGHSLYCNLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVI | null | 0.37999657635046324 | | - 29 17489 | CTG | GACCA | D | null | -1354298566 | true | LCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYW | null | 0.9746654097927338 | PMURZGGYMIELVHMRKLLCGOGZ | - 30 17606 | TGTAG | CCACAGAAGC | V | null | 1878366945 | true | TSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQ | null | 0.3397356585960569 | XUCJTEKJBHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMV | - 31 18076 | GCT | CTCG | P | null | -1494948578 | false | KXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXN | null | 0.7635122604571503 | ZQWDQPYHXAJOITFCVMOPIMPXRLKAIEIOUMPNXSABCPGVHHLJEBZYNSDERCMAIXBNIQRIEMDHOQFQNJQUXLEAMIGIACWWMBNSJU | - 32 18957 | TGTG | GT | C | null | 1406916527 | true | FHE | null | 0.3484911209670729 | | - 33 19938 | ATCT | TGAAC | O | null | 1149795017 | null | NTKURUNTGXBCRIYGMXGLYBFIHLNCHAUOTOBMXBPTXHXONSYUZUFENSQQWZ | null | null | KRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJ | - 34 20585 | TA | GTCA | G | null | null | false | WOAEHZWLSQJATLMHBLMPH | null | 0.9344242335487438 | GCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVS | - 35 21560 | GA | TTA | H | null | -205155770 | null | null | null | null | JDWQYQEYTRZGFJYAWMGVKTNMFTZSO | - 36 21988 | AA | GGGT | F | null | -1432480630 | true | TILJJSHAQMNRS | null | 0.3133917870266195 | BMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOP | - 37 22427 | CCCACG | TTGT | E | null | 860447657 | true | LHWZQAMTRPVRWFEGXRZRFDZRKFJOMCLPTTEKBFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTC | null | 0.694454522391098 | null | - 38 22883 | CGA | TCGTGTTGCA | U | null | -1787101930 | true | YNVOKDHIXALLPU | null | 0.36980056706464903 | DGWDDGQCUCQXBOMEYSHE | - 39 23461 | TGTCC | CA | B | null | -1176210216 | false | SRAABIXFMQFNGHXLSOEAJKVRSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYV | null | 0.3517610111383015 | null | - 40 23891 | GATC | TCG | K | null | -2118220436 | true | TOZFRCDZWFXPYAZDFJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMY | null | 0.6397097529450779 | XXEALXRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMYY | - 41 24581 | CGG | TTTT | A | null | 426196393 | false | KUOAQXSZYHTFPESQNYFKQEPAP | null | 0.5332729085977445 | IVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQMAPZOPDSXSKNPUUTRASSVAQLB | - 42 24617 | AGAG | GACCT | null | null | -298680206 | false | COPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUO | null | 0.9217536754688332 | UYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYB | - 43 25109 | AAT | TCAGT | S | null | -1807342243 | true | PKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOV | null | 0.028187333666930825 | QHQDIEBEXBHJFIMPPDVZXFSSIZVMSEVENLFRCLOJVRJUUTROOOT | - 44 25687 | GA | CGCCCC | R | null | 1025744915 | true | LAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDP | null | 0.761817576180882 | WOPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDK | - 45 25708 | TC | GTCTC | null | null | 1837325288 | false | null | null | 0.7695808495019865 | OOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQ | - 46 26557 | CC | GAA | Z | null | 1120279121 | false | LTTAXEEGFQGXLBBHXRCJVLXRLFKYGSTLWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNR | null | 0.8524057650440213 | null | - 47 27162 | GTAG | TCGTT | Z | null | 52752038 | true | BPZBSVD | null | 0.8135675453387192 | KD | - 48 27375 | CAA | ACGTT | O | null | 350350448 | false | null | null | 0.03426922763719786 | JAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNC | - 49 27499 | AAG | TGCAGT | A | null | 23904471 | false | null | null | 0.555524367802816 | NYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXADIYLUONTQ | - 50 27892 | TT | GGAG | Z | null | 980648983 | false | YHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNPAZQNUZCBTV | null | 0.9356403643683727 | DXIFUGVSFLODMYZHIL | - 51 28540 | GCCG | AG | D | null | -1499042282 | false | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO | null | 0.2701407767298879 | null | - 52 29421 | GGTC | AAGGGG | H | null | -1649570894 | true | DFFUUTDDXURSPKSC | null | 0.5873439005542106 | URGROVHDGOLLVMWBULF | - 53 30224 | TAT | AGGC | O | null | null | false | null | null | 0.07495722896453205 | VEDGKFHPAFTMIKDCKWPZQGZKFCTREWKRHVHNGEOUBUIDIWX | - 54 31106 | GCAA | TA | C | null | -130152109 | true | PXLEGILTKJKBPLEWXUAUUEGQTKNBBOPMKWBRCLYRX | null | 0.8287913220463654 | UDXOHXBODYUAKYGAHTLQELXYTJ | - 55 31183 | GGA | CA | Z | null | 2067688714 | true | CKZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVT | null | 0.24977730671660292 | GJOTHKAVFTWIUOIHRTVRUY | - 56 31297 | ATTG | TG | R | null | 1742753232 | false | NSIEYGJ | null | 0.7375087780942288 | MUPECSVBKGRQSNGD | - 57 31496 | AGGAAT | GT | I | null | 2017697704 | true | FHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGN | null | 0.3831208851383727 | EBKTFLFFLUFTSGJBQGYPKJPUATVBRLNYHIUPECZERSOMBIFLOGISAKLNHGVIVMCRZG | - 58 32442 | GCCCG | TAAGTT | A | null | -1205957868 | false | EERZXKCHCRVOGQDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIR | null | 0.8878475241886875 | ZCCVYKLUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQ | - 59 33428 | GG | CCTATG | null | null | 1219143705 | false | NVUBWFASDAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPP | null | 0.7441218930581249 | HHGTIVJGFPETBDVJSQBAQBCZIHQFIGJUIQDVGBKHIBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFE | - 60 33855 | AGTTTG | GCG | D | null | -2022598863 | false | SRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXWNYPFV | null | null | DZLRXCLXTZSXTKYSTMBQGGRL | - 61 33915 | ACGC | TACGACCGTGT | H | null | -1128367852 | null | TMPMZPSCZTRZLGJ | null | 0.5491902435953122 | null | - 62 34483 | TAGC | CGCGAT | null | null | -1557358100 | true | CYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEI | null | 0.31295892252145074 | CGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJK | - 63 34709 | CCC | AGGA | J | null | -835675181 | true | JCLUBGMVFISLNJIC | null | 0.9602366045493509 | VLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZ | - 64 35340 | TTC | GGACA | K | null | -166905458 | true | WFEBOBSMKUXNYIRQCUBYGFSIMFYUAOECXQBG | null | 0.8602483882443271 | NPJBGGWENLYYCJTPADCDDQOGHMOVVSZJD | - 65 35472 | TGAGGC | GCGAA | E | null | -1631313891 | true | NDQIYDBVMBDDWTLHTNDQJWCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXV | null | 0.12363944563302387 | null | - 66 35669 | ATTGA | TCCTCA | C | null | -588298380 | false | IQCYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJBEA | null | 0.8550234837562305 | VMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBFWBJNIIFDYZWDSDUABTFOWDJHCNWEFLHQSSDKFHQVLDLE | - 67 35728 | GAACCT | CTTT | H | null | -747544882 | null | IDKXPHFOTFRATSTVGMMNADVITTBCUBYQE | null | 0.7490687548616841 | OMXYIBMPQHOMYJBNEODMVEEFBCTJXH | - 68 36183 | AC | CATTA | I | null | -1319632117 | false | CTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRL | null | 0.4413689991083415 | EUXCUGFHDUYGCNDAMPRDV | - 69 36578 | AAAT | GGCAT | R | null | null | false | GDVIDDYSIARMFNRXIDQWTWJFLQPICW | null | 0.43186967699327505 | HYNPLTFNBOQDFQOS | - 70 36971 | ACTTG | GG | null | null | 1277958572 | false | DARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPHFWRRBUMUSFMSQDSIHADOFZLPCQVYZEBMKVBMFPHNELK | null | 0.4453573989044963 | TPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQD | - 71 37618 | TTAG | CAG | B | null | 1037393841 | false | BHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCDB | null | 0.39609232226749236 | null | - 72 38201 | TAC | ACGTC | D | null | -2079477320 | false | ZGJVDJEEACE | null | 0.07742081110010546 | YUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLLIVKIMHNAJEWWRVWIZSG | - 73 38493 | GCCTG | CAGA | H | null | -1463798583 | null | KVEWCKVJHOOKWRVKHVYQCQKXUPYHKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRG | null | 0.9277467500723097 | | - 74 38540 | GGA | TATT | J | null | -1689361592 | true | IUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCBUUEXHGUEQLV | null | 0.8092660381674348 | KTOJGDTUTFKJQGNEXEKZSZQSANBMVAXRABRZWJEAEABTMFLNYIAJYPSXDXCZBQOPQMSFJNWUVWDOSQMSW | - 75 39183 | AG | CTTTG | R | null | -1961645317 | false | UHAVSYGXMMWZ | null | 0.7538616470122224 | LYWEJMYHNTTSXXCLCCPJRBGGEOPFR | - 76 39799 | GT | AAT | null | null | -110423199 | false | TENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWSCGDKYTEGYYTNJQB | null | 0.12046287233320274 | IYFBAUNPDVYDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJ | - 77 40229 | TTGTTT | CCAA | V | null | 1431130355 | false | KLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJASSEOOTVOMHEQALCBNSOIUBJHULZAQBBRFRJGAZJ | null | 0.7558427773660447 | BVHLRZZCIVSXZRKBEOERVKNQMYPBSUHNQKRZJLAUPUQUKFCWVILOI | - 78 40732 | CTCC | AATGT | G | null | 587644912 | true | LHXNORWCADYZZKOKNDIJQWVENOKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEPCPEAN | null | 0.4224823862977449 | MDCUYXFUMVUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDII | - 79 41491 | CACA | ACTGCTTCG | H | null | -554956194 | false | OLXJAFLXULPZGOHHPVYKONTTVCOQ | null | 0.5208315202141268 | LOGWYTQNLEWXWB | - 80 41770 | AAAT | CTGATTAGAC | W | null | -985447616 | true | ORFBZWSPFYBDENAEMVIQZBDVRTNVQWSKU | null | 0.7821972190790509 | NRKHLCUIXZZIYXHYQTEPKZLFFDEOMBEYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJTIMZCUTWALOTKN | - 81 42042 | AAGCGC | GT | M | null | -1038527991 | true | MSBKHRYXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZRA | null | 0.37288256822247545 | TKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQVTGTYHRYIKSBPMDLKYANUQQSBHH | - 82 42652 | GTG | AC | P | null | 1557281811 | true | SFUBICUYVGZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNSV | null | null | DYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWXLIDELTXVWYOGYCNFDSSXEVDGHUMRBMPSIPOELOIZ | - 83 43313 | GAGAA | ATACTTAGAA | R | null | 978785572 | true | null | null | 0.32522709311038844 | ULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAP | - 84 43685 | TA | CTGA | S | null | 1153307754 | true | UVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNV | null | 0.17365479912109194 | LFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBU | - 85 44141 | ACG | CGCCATT | I | null | -999066038 | false | QVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXIWYNWPONALNRDOU | null | 0.8295755949338437 | null | - 86 44779 | CTATA | TGGAGT | R | null | null | false | VNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURGSXFJCAXCGZKZKGXUYPFWXONPKQUQOCSOLG | null | 0.7400197473135066 | YBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFW | - 87 45371 | GACTA | CC | K | null | 468567806 | true | RORVMYYKPYAM | null | 0.11273881633613159 | IGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQ | - 88 45571 | TAACTC | GCC | F | null | -287500759 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.8056508189855021 | EGYAKQZXEGXNLLREPZFWVCTQTH | - 89 46066 | GGCAG | AAA | C | null | -493586842 | true | AHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGT | null | 0.612124337258956 | UNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPI | - 90 46985 | TAG | CTTA | W | null | 351786237 | null | XUNGJITKBVEEPVVKXCSIXIBPDCIIEIJGPIYRYOKKJGWQFGMJFLHZAHXAQFYBZVVK | null | 0.27826706664560996 | AMVZAAQHDHBHFFAYFMRFB | - 91 47081 | TACCC | AGAG | E | null | -36353828 | true | KKJO | null | 0.0291007292139015 | TKZUZKDQYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWS | - 92 47907 | ATTCA | TCC | A | null | 613424168 | false | FSUXWPAZCGDEZLOURIYYLWILVSASNXJPRPTZJUVXIXGKFSRYQHMBXLWGDWVBAGMP | null | 0.2190837769941144 | YSMVTAGLUX | - 93 48226 | TAGC | GTATTATCGC | Q | null | 1202745151 | false | HMAZQXNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJUZMHOMCUHBNTWZFLRLFXDZVCSKRHFAOHYQERO | null | 0.3656546516594086 | HTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWL | - 94 48416 | GA | ATTC | B | null | -1923088956 | false | NYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJK | null | 0.8751078883243962 | YOQUBORWBWITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYREHOBNQZAXRCSAFUCKBVTXSFZIRE | - 95 49291 | TCCT | GGG | B | null | null | false | ERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHO | null | 0.7202708244462117 | DOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCI | - 96 49771 | TGGT | CAC | P | null | -1705231585 | false | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | null | 0.03359993949940343 | null | - 97 50142 | TTCTA | GAAA | R | null | 789177677 | true | null | null | 0.42057612519588505 | NLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZAUQLGKFGNIUNTJWMMJQHSKQBSLLSGOWIMIRRBIEZVEAOMGJ | - 98 50305 | GGA | AAGG | G | null | -1078219233 | null | LOOZKHCWJZYEZKSPMSDXYJXODFUCNQJPJJQLSMLNNQFYIWKZIBFJARVKVELGNMJBSLVSOJJPATNF | null | 0.7680804977882877 | null | - 99 50789 | CTCC | TGATA | N | null | -1627198920 | false | JAJASVDEOFQ | null | 0.5578843763975981 | GYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEH | - -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in org.snpsift.tests.unit.TestCasesDataFrameMixed -[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateUseIndex -TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test -TestCasesAnnotate.test_29_repeated_IDs(618): Test -TestCasesAnnotate.test_01(145): Test -TestCasesAnnotate.test_02(153): Test -TestCasesAnnotate.test_03(161): Test -TestCasesAnnotate.test_04(169): Test -TestCasesAnnotate.test_05(181): Test -TestCasesAnnotate.test_06(192): Test -TestCasesAnnotate.test_07(217): Test -TestCasesAnnotate.test_08(232): Test -TestCasesAnnotate.test_09(245): Test -TestCasesAnnotate.test_11(273): Test -TestCasesAnnotate.test_12(300): Test -TestCasesAnnotate.test_13(320): Test -TestCasesAnnotate.test_14(340): Test -TestCasesAnnotate.test_15(356): Test -TestCasesAnnotate.test_16(372): Test -TestCasesAnnotate.test_17(390): Test -TestCasesAnnotate.test_18(415): Test -TestCasesAnnotate.test_19(428): Test -TestCasesAnnotate.test_20(439): Test -TestCasesAnnotate.test_21(453): Test -TestCasesAnnotate.test_22(479): Test -TestCasesAnnotate.test_24(509): Test -TestCasesAnnotate.test_25(539): Test -TestCasesAnnotate.test_35(693): Test -TestCasesAnnotate.test_36(711): Test -TestCasesAnnotate.test_38(732): Test -TestCasesAnnotate.test_39(743): Test -TestCasesAnnotate.test_40(762): Test -TestCasesAnnotate.test_41(770): Test -TestCasesAnnotate.test_42(781): Test -TestCasesAnnotate.test_43(809): Test -TestCasesAnnotate.test_44(835): Test -TestCasesAnnotate.test_45(861): Test -TestCasesAnnotate.test_33_empty_db(665): Test -TestCasesAnnotate.test_26_repeat_db_entry(568): Test -TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test -TestCasesAnnotate.test_28_exists(596): Test -TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test -TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test -TestCasesAnnotate.test_27_repeat_db_entry(580): Test -[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 19.543 s - in org.snpsift.tests.unit.TestCasesAnnotateUseIndex -[INFO] Running org.snpsift.tests.unit.TestCasesConcordance -TestCasesConcordance.test_01(68): Test -TestCasesConcordance.test_02(74): Test -TestCasesConcordance.test_03(80): Test -TestCasesConcordance.test_04(91): Test -TestCasesConcordance.test_05(102): Test -TestCasesConcordance.test_06(113): Test -TestCasesConcordance.test_07(125): Test -TestCasesConcordance.test_08(131): Test -TestCasesConcordance.test_09(142): Test -TestCasesConcordance.test_10(153): Test -TestCasesConcordance.test_11(164): Test -TestCasesConcordance.test_12(181): Test -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.039 s - in org.snpsift.tests.unit.TestCasesConcordance -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnString -DataFrameColumnString.resize(76): Converting column 'Test' to EnumArray. Found 6 enums found. Size before: 44 B, after: 5 B -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 25.21 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnString -[INFO] Running org.snpsift.tests.unit.TestCasesVarType -TestCasesVarType.test_05_multiple(82): Test -TestCasesVarType.test_01_SNP(58): Test -TestCasesVarType.test_02_MNP(64): Test -TestCasesVarType.test_03_INS(70): Test -TestCasesVarType.test_04_DEL(76): Test -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.013 s - in org.snpsift.tests.unit.TestCasesVarType -[INFO] Running org.snpsift.tests.unit.TestCasesExtractFields -TestCasesExtractFields.test_31_ann(291): Test -TestCasesExtractFields.test_00(71): Test -TestCasesExtractFields.test_01(98): Test -TestCasesExtractFields.test_02(104): Test -TestCasesExtractFields.test_03(110): Test -TestCasesExtractFields.test_04(116): Test -TestCasesExtractFields.test_05(122): Test -TestCasesExtractFields.test_06(128): Test -TestCasesExtractFields.test_07(134): Test -TestCasesExtractFields.test_08(140): Test -TestCasesExtractFields.test_09(146): Test -TestCasesExtractFields.test_10(152): Test -TestCasesExtractFields.test_11(158): Test -TestCasesExtractFields.test_12(164): Test -TestCasesExtractFields.test_13(170): Test -TestCasesExtractFields.test_14(176): Test -TestCasesExtractFields.test_15(182): Test -TestCasesExtractFields.test_16(188): Test -TestCasesExtractFields.test_17(194): Test -TestCasesExtractFields.test_18(200): Test -TestCasesExtractFields.test_19(206): Test -TestCasesExtractFields.test_20(212): Test -TestCasesExtractFields.test_23(218): Test -TestCasesExtractFields.test_24(224): Test -TestCasesExtractFields.test_25(230): Test -TestCasesExtractFields.test_26(236): Test -TestCasesExtractFields.test_27(242): Test -TestCasesExtractFields.test_28(253): Test -TestCasesExtractFields.test_29(262): Test -TestCasesExtractFields.test_30(273): Test -TestCasesExtractFields.test_31(282): Test -TestCasesExtractFields.test_32(300): Test -TestCasesExtractFields.test_33(312): Test -TestCasesExtractFields.test_34(323): Test -TestCasesExtractFields.test_35(340): Test -[INFO] Tests run: 35, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.062 s - in org.snpsift.tests.unit.TestCasesExtractFields -[INFO] Running org.snpsift.tests.unit.TestCasesPosIndex -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.snpsift.tests.unit.TestCasesPosIndex -[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateCreateIndex -TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test -TestCasesAnnotate.test_29_repeated_IDs(618): Test -TestCasesAnnotate.test_01(145): Test -TestCasesAnnotate.test_02(153): Test -TestCasesAnnotate.test_03(161): Test -TestCasesAnnotate.test_04(169): Test -TestCasesAnnotate.test_05(181): Test -TestCasesAnnotate.test_06(192): Test -TestCasesAnnotate.test_07(217): Test -TestCasesAnnotate.test_08(232): Test -TestCasesAnnotate.test_09(245): Test -TestCasesAnnotate.test_11(273): Test -TestCasesAnnotate.test_12(300): Test -TestCasesAnnotate.test_13(320): Test -TestCasesAnnotate.test_14(340): Test -TestCasesAnnotate.test_15(356): Test -TestCasesAnnotate.test_16(372): Test -TestCasesAnnotate.test_17(390): Test -TestCasesAnnotate.test_18(415): Test -TestCasesAnnotate.test_19(428): Test -TestCasesAnnotate.test_20(439): Test -TestCasesAnnotate.test_21(453): Test -TestCasesAnnotate.test_22(479): Test -TestCasesAnnotate.test_24(509): Test -TestCasesAnnotate.test_25(539): Test -TestCasesAnnotate.test_35(693): Test -TestCasesAnnotate.test_36(711): Test -TestCasesAnnotate.test_38(732): Test -TestCasesAnnotate.test_39(743): Test -TestCasesAnnotate.test_40(762): Test -TestCasesAnnotate.test_41(770): Test -TestCasesAnnotate.test_42(781): Test -TestCasesAnnotate.test_43(809): Test -TestCasesAnnotate.test_44(835): Test -TestCasesAnnotate.test_45(861): Test -TestCasesAnnotate.test_33_empty_db(665): Test -TestCasesAnnotate.test_26_repeat_db_entry(568): Test -TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test -TestCasesAnnotate.test_28_exists(596): Test -TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test -TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test -TestCasesAnnotate.test_27_repeat_db_entry(580): Test -[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 18.353 s - in org.snpsift.tests.unit.TestCasesAnnotateCreateIndex +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in org.snpsift.tests.unit.TestCasesDataFrameIns [INFO] Running org.snpsift.tests.unit.TestCasesSort TestCasesSort.test_01(30): Test -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.tests.unit.TestCasesSort +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.016 s - in org.snpsift.tests.unit.TestCasesSort +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnString +DataFrameColumnString.resize(76): Converting column 'Test' to EnumArray. Found 6 enums found. Size before: 44 B, after: 5 B +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 136.295 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnString [INFO] Running org.snpsift.tests.unit.TestCasesStringArray -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 25.054 s - in org.snpsift.tests.unit.TestCasesStringArray -[INFO] Running org.snpsift.tests.unit.TestCasesCaseControl -TestCasesCaseControl.test_01(53): Test -TestCasesCaseControl.test_02(65): Test -TestCasesCaseControl.test_03(83): Test -TestCasesCaseControl.test_04(107): Test -TestCasesCaseControl.test_05(119): Test -TestCasesCaseControl.test_06(125): Test -TestCasesCaseControl.test_07(131): Test -TestCasesCaseControl.test_08(137): Test -TestCasesCaseControl.test_09(146): Test -TestCasesCaseControl.test_10(222): Test -TestCasesCaseControl.test_02_Str2(77): Test -TestCasesCaseControl.test_03_Str2(95): Test -TestCasesCaseControl.test_03_Str3(101): Test -TestCasesCaseControl.test_01_Str(59): Test -TestCasesCaseControl.test_02_Str(71): Test -TestCasesCaseControl.test_03_Str(89): Test -TestCasesCaseControl.test_04_Str(113): Test -[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.515 s - in org.snpsift.tests.unit.TestCasesCaseControl -[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateMem -TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test -TestCasesAnnotate.test_29_repeated_IDs(618): Test -TestCasesAnnotate.test_01(145): Test -TestCasesAnnotate.test_02(153): Test -TestCasesAnnotate.test_03(161): Test -TestCasesAnnotate.test_04(169): Test -TestCasesAnnotate.test_05(181): Test -TestCasesAnnotate.test_06(192): Test -TestCasesAnnotate.test_07(217): Test -TestCasesAnnotate.test_08(232): Test -TestCasesAnnotate.test_09(245): Test -TestCasesAnnotate.test_11(273): Test -TestCasesAnnotate.test_12(300): Test -TestCasesAnnotate.test_13(320): Test -TestCasesAnnotate.test_14(340): Test -TestCasesAnnotate.test_15(356): Test -TestCasesAnnotate.test_16(372): Test -TestCasesAnnotate.test_17(390): Test -TestCasesAnnotate.test_18(415): Test -TestCasesAnnotate.test_19(428): Test -TestCasesAnnotate.test_20(439): Test -TestCasesAnnotate.test_21(453): Test -TestCasesAnnotate.test_22(479): Test -TestCasesAnnotate.test_24(509): Test -TestCasesAnnotate.test_25(539): Test -TestCasesAnnotate.test_35(693): Test -TestCasesAnnotate.test_36(711): Test -TestCasesAnnotate.test_38(732): Test -TestCasesAnnotate.test_39(743): Test -TestCasesAnnotate.test_40(762): Test -TestCasesAnnotate.test_41(770): Test -TestCasesAnnotate.test_42(781): Test -TestCasesAnnotate.test_43(809): Test -TestCasesAnnotate.test_44(835): Test -TestCasesAnnotate.test_45(861): Test -TestCasesAnnotate.test_33_empty_db(665): Test -TestCasesAnnotate.test_26_repeat_db_entry(568): Test -TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test -TestCasesAnnotate.test_28_exists(596): Test -TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test -TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test -TestCasesAnnotate.test_27_repeat_db_entry(580): Test -[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 25.436 s - in org.snpsift.tests.unit.TestCasesAnnotateMem +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 139.288 s - in org.snpsift.tests.unit.TestCasesStringArray [INFO] Running org.snpsift.tests.unit.TestCasesPrivate TestCasesPrivate.test_01(48): Test TestCasesPrivate.test_02(59): Test @@ -3348,11 +3667,9 @@ TestCasesPrivate.test_06(95): Test TestCasesPrivate.test_07(101): Test TestCasesPrivate.test_08(107): Test -[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.tests.unit.TestCasesPrivate -[INFO] Running org.snpsift.tests.unit.TestCasesIntervals -TestCasesIntervals.test_01(25): Test -TestCasesIntervals.test_02(50): Test -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.tests.unit.TestCasesIntervals +[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.272 s - in org.snpsift.tests.unit.TestCasesPrivate +[INFO] Running org.snpsift.tests.unit.TestCasesVariantTypeCounter +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in org.snpsift.tests.unit.TestCasesVariantTypeCounter [INFO] Running org.snpsift.tests.unit.TestCasesDbNsfp TestCasesDbNsfp.test_01(113): Test TestCasesDbNsfp.test_02(138): Test @@ -3360,91 +3677,9 @@ TestCasesDbNsfp.test_04(179): Test TestCasesDbNsfp.test_05(200): Test TestCasesDbNsfp.test_06(223): Test -[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.752 s - in org.snpsift.tests.unit.TestCasesDbNsfp -[INFO] Running org.snpsift.tests.unit.TestCasesDbNsfpDeleteCache -TestCasesDbNsfp.test_01(113): Test -TestCasesDbNsfp.test_02(138): Test -TestCasesDbNsfp.test_03(160): Test -TestCasesDbNsfp.test_04(179): Test -TestCasesDbNsfp.test_05(200): Test -TestCasesDbNsfp.test_06(223): Test -[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 12.691 s - in org.snpsift.tests.unit.TestCasesDbNsfpDeleteCache -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnFloat -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.565 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnFloat -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnBool -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.926 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnBool -[INFO] Running org.snpsift.tests.unit.TestCasesFilter -TestCasesFilter.test_57_short_circuit_AND_OR_operators(1724): Test -TestCasesFilter.test_32_ann(988): Test -TestCasesFilter.test_33_ann(1049): Test -TestCasesFilter.test_34_ann(1108): Test -TestCasesFilter.test_35_ann(1167): Test -TestCasesFilter.test_01(40): Test -TestCasesFilter.test_02(64): Test -TestCasesFilter.test_03(86): Test -TestCasesFilter.test_04(110): Test -TestCasesFilter.test_05(134): Test -TestCasesFilter.test_06(158): Test -TestCasesFilter.test_07(182): Test -TestCasesFilter.test_08(208): Test -TestCasesFilter.test_09(236): Test -TestCasesFilter.test_10(258): Test -TestCasesFilter.test_11(281): Test -TestCasesFilter.test_12(303): Test -TestCasesFilter.test_13(326): Test -TestCasesFilter.test_14(348): Test -TestCasesFilter.test_15(381): Test -TestCasesFilter.test_16(407): Test -TestCasesFilter.test_17(435): Test -TestCasesFilter.test_18(459): Test -TestCasesFilter.test_19(483): Test -TestCasesFilter.test_20(507): Test -TestCasesFilter.test_21(532): Test -TestCasesFilter.test_22(559): Test -TestCasesFilter.test_23(615): Test -TestCasesFilter.test_24(642): Test -TestCasesFilter.test_25(669): Test -TestCasesFilter.test_26(697): Test -TestCasesFilter.test_27(748): Test -TestCasesFilter.test_28(846): Test -TestCasesFilter.test_29(875): Test -TestCasesFilter.test_30(903): Test -TestCasesFilter.test_31(932): Test -TestCasesFilter.test_32(960): Test -TestCasesFilter.test_33(1021): Test -TestCasesFilter.test_34(1081): Test -TestCasesFilter.test_35(1140): Test -TestCasesFilter.test_36(1198): Test -TestCasesFilter.test_37(1222): Test -TestCasesFilter.test_38(1247): Test -TestCasesFilter.test_39(1272): Test -TestCasesFilter.test_40(1295): Test -TestCasesFilter.test_41(1320): Test -TestCasesFilter.test_42(1356): Test -TestCasesFilter.test_43(1374): Test -TestCasesFilter.test_44(1392): Test -TestCasesFilter.test_45(1410): Test -TestCasesFilter.test_46(1437): Test -TestCasesFilter.test_47(1448): Test -TestCasesFilter.test_48(1459): Test -TestCasesFilter.test_49(1475): Test -TestCasesFilter.test_50(1494): Test -TestCasesFilter.test_51(1526): Test -TestCasesFilter.test_52(1560): Test -TestCasesFilter.test_53(1583): Test -TestCasesFilter.test_54(1605): Test -TestCasesFilter.test_55(1627): Test -TestCasesFilter.test_22_3(589): Test -TestCasesFilter.test_55_2(1647): Test -TestCasesFilter.test_55_3(1667): Test -TestCasesFilter.test_56_empty_vcf(1687): Test -TestCasesFilter.test_58_rmFilter_info_field(1747): Test -TestCasesFilter.test_27_ann2(812): Test -TestCasesFilter.test_26_ann(721): Test -TestCasesFilter.test_27_ann(778): Test -[INFO] Tests run: 68, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.941 s - in org.snpsift.tests.unit.TestCasesFilter -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnInt -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.984 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnInt +[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 67.154 s - in org.snpsift.tests.unit.TestCasesDbNsfp +[INFO] Running org.snpsift.tests.unit.TestCasesLd +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in org.snpsift.tests.unit.TestCasesLd [INFO] Running org.snpsift.tests.unit.TestCasesEnumArray EnumArray: length: 17 / 17, number of enums: 6 0: 'one' (1) @@ -3458,124 +3693,8 @@ 8: 'three' (3) 9: 'four' (4) -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.698 s - in org.snpsift.tests.unit.TestCasesEnumArray -[INFO] Running org.snpsift.tests.unit.TestCasesGeneSets -TestCasesGeneSets.test_01(25): Test -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.025 s - in org.snpsift.tests.unit.TestCasesGeneSets -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameMnp -DataFrame: MNP, size: 100, current index: 100, memory: 63.4 KB - Field types: - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - 0 130 | GACTC | ATGCT | G | null | -346484495 | false | QZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPL | null | 0.43979982659080874 | VGLPKFFVDPCDVBXJS | - 1 800 | CCA | GAT | S | null | 734084664 | false | YGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYEMFMQTLZADZBNDXVF | null | 0.6279332754134727 | XNTLWTQRTLGZHNXJGLETAEGILYUTDVAIF | - 2 1259 | TC | GT | S | null | null | false | SRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTD | null | 0.8556303199441717 | IFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBF | - 3 1947 | AGAAA | GCGTC | F | null | -135854320 | true | HAYYLXAIMKCTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAAKWGAU | null | null | | - 4 2673 | TC | CG | F | null | -288299077 | true | null | null | 0.7278040889330866 | TPRSHRUNJEPJIC | - 5 3562 | AGGTTA | GATAGC | U | null | 162252886 | true | BUTZYQGKGJWBPOXVODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJ | null | 0.028750514440683772 | AMKDDPVNZURFTUUMHFZGRNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHAR | - 6 4158 | CCTCCC | GAGAAT | B | null | -304213835 | false | MFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTU | null | 0.04102447110373153 | SHHXQXSIOOTQBYAMZRFKJCJOARSXBEQNWBEYBTRLLBJTOPXYAVBUFKFXCYZJXGYVIC | - 7 4279 | CC | GG | X | null | 256660382 | false | MONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEO | null | 0.19109407573087445 | ASEUGGPSBVAVQAISGEPOGDMTZP | - 8 4676 | TTCTA | GATCC | R | null | -759679086 | false | HYLGVDHQHETXOLC | null | 0.36492146475814047 | VEUUG | - 9 5500 | AG | TC | O | null | -1679979548 | false | QKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUCMTSWCUNQIYBBUBAZLCDFWYENCGBPHX | null | 0.8750558587334625 | CDASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJW | - 10 5518 | CAGCA | ACAAT | G | null | -886012130 | false | VHQMFXCKFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLP | null | 0.9484603601700132 | MYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZT | - 11 5728 | ACGC | GTCA | Y | null | -1245654784 | false | IAAHSWFGVIBKKGFWKBYZYNSNTPANSIGHYIAITLYHHFQBGATATIA | null | 0.7194449346355324 | IKEXJRDMJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZ | - 12 6459 | CCG | AGA | null | null | -129760917 | false | BYNFJGRC | null | 0.5882172034343477 | GIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYVCLDTIMJZUEMQPCYGQYRZLRREBLEBHRQZRGEYW | - 13 6889 | AGCGC | CCAAG | P | null | 1620772052 | true | null | null | 0.35351188686690904 | FUCMTYDAXAWLEPFSOPHVFZUEFDEJ | - 14 7834 | AA | CT | null | null | 335155552 | false | null | null | 0.4086730063619384 | null | - 15 8137 | CTAG | TCCT | D | null | 690281034 | true | HBLPLKJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQC | null | 0.4844370393511812 | UBSELUPRB | - 16 9084 | TT | AA | C | null | 917754666 | false | XDMDFINZHSRJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRABIWE | null | 0.6487816358956248 | SWJIIPEMJKSOVNOHLLTOINNESNDAMN | - 17 9409 | GCCT | TGAC | null | null | null | false | SFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUSOS | null | 0.5577468336431636 | WNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJS | - 18 10001 | TGCACA | ATAGTG | T | null | -1515629276 | null | null | null | null | VSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXT | - 19 10311 | GTGT | ACTG | Q | null | -1617046473 | true | YHVYMSZDYZLGDMWL | null | 0.9831828393010831 | UUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDBOCPC | - 20 11068 | GT | CG | N | null | 509578579 | null | UKFPBAFIBSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJS | null | 0.7785962769003004 | TPEZATDQXXMYLARYBPGPAPLS | - 21 11174 | TGCTCT | AAACTA | P | null | 921144451 | false | WOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUU | null | 0.9123421937562539 | R | - 22 11571 | CTAG | TCCT | D | null | 1718949627 | false | MYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJFX | null | 0.46673104389165376 | TYPTCCKIUXDNSLHWUDRUSZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQRLQGVCFGV | - 23 12078 | CCCT | TTTC | O | null | -1384192067 | false | NJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCSMNEYJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXLDNNXPCVBJPSNJTEH | null | 0.26815358468775163 | XTCDDIXWJJSJYHEWHKXIGPLGGEVWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEO | - 24 12254 | TCAC | GGTT | null | null | -438374424 | true | null | null | 0.14673592424180915 | AHUDG | - 25 12349 | ATCAT | CGGTA | H | null | 758453846 | true | KLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPB | null | 0.2292387309942473 | YYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGGYMIELV | - 26 13123 | CCC | GAT | X | null | -1001450513 | true | JSK | null | 0.2696122012937159 | BHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMVQSQTSRSIRDVTNMTRXPB | - 27 13770 | TGAT | GATG | null | null | 2005789910 | true | PWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQWJECWFMMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOITFCV | null | null | XP | - 28 14344 | ACG | TAT | P | null | 1199993081 | true | FQNJQUXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHA | null | 0.5103393097757357 | GVHHLJEBZYNSDERCMAIXBNIQRIEMD | - 29 14756 | TGAC | CTTT | N | null | -1804611253 | false | LGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJUVINT | null | 0.7827166701418667 | CUDRTBUEEBJFHEBUIHMNHWIMEDVXAMQMWWROUPEHPKRI | - 30 15508 | GAAT | CGTG | H | null | 1220755583 | false | MBQAJLGCZOUMEVVTADJIMOLIX | null | 0.5501110077087921 | TOBMXBPTXHXONSYUZUFENSQQWZBPWGGGPCOYIRUODLHH | - 31 16240 | AGGAA | CACGG | U | null | 559197251 | true | HBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJ | null | 0.4097318407654317 | RFLVSUERWOAEHZWLSQJA | - 32 16358 | GGTA | CAGT | null | null | null | true | QBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOPVYHTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZ | null | 0.9780981106199931 | NXLQTNZOAMMXFPMGJWHVBMIISKYUETNMSZMQMOXJFESSUV | - 33 16976 | AAACAC | TCCGCT | M | null | -319681430 | false | DSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJ | null | 0.3831246943809442 | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW | - 34 17435 | AACCCT | GGTTAA | R | null | -2051070316 | true | LDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJ | null | 0.8501062151834663 | XGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXR | - 35 18205 | AATAT | CCACA | R | null | -1016853906 | false | RQQLRESQTQPMYWUYTHQCHTPHGWMYYPIWPAHZMSNEIIVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQM | null | 0.1252305846603955 | YAZDFJJHTKRYJFYFQLAKZUSSPYAPSWB | - 36 18671 | CTAA | ACCT | A | null | 312433305 | true | QXSZYHTFPESQNYFKQEPAPSQQOQTKLVFPHTXHKJQVYAMKHLOWPTSYXUYRRGGG | null | 0.7732929039471246 | | - 37 18815 | AGGT | TCCC | H | null | -192126094 | true | FDEFEAIUVTSP | null | 0.6687744242493339 | CZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQ | - 38 18990 | CCTCC | TTGAG | L | null | 1338557204 | false | KEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRHFHNQMBPQZMVYTJOPTTGRQOOBAXHWOPEORODIVFVMHWOXPGIWSRG | null | null | ZTXKZAMMIUSGJPTSJDTKELPQHQDIEBEXBHJFIMPPDVZXFSSIZVMSEVENLFRCLOJVRJUUTROOOTNOWPKPFZRWZGJGDREVYFY | - 39 19649 | CCTTAT | TTAGGG | R | null | -845218447 | true | AVLQKIFL | null | 0.7741583228840283 | CGXHLBHRLBCINDKYLGDKTYCLAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERA | - 40 20607 | GCCAT | TGTCA | K | null | -45025817 | true | YHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCLAUMVGKGUNPFZAZQHYKIPFDMLTTAXEEGFQGXLBBH | null | 0.9691373737772555 | XUKJDPVJPSOBEOLCFOWQUAECVTRUGBQXLOOIN | - 41 21156 | GCCGCA | CGTATG | W | null | -1243561189 | true | SMRUPT | null | 0.4429926847541722 | SYPRLU | - 42 21806 | TA | AC | null | null | 1735497575 | false | null | null | 0.0394328659741473 | null | - 43 21839 | AG | TA | B | null | -865651518 | true | QFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNCFTYYJLZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXUL | null | 0.5871949292573951 | EPZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTH | - 44 22489 | CGATCT | TCGGTC | P | null | 330394861 | false | FFXUWDNIYWXADIYLUONTQMETNMCPYCWDFLSHSINSSHZSF | null | 0.2997445310722515 | | - 45 23072 | GTTGGG | CCAAAA | Y | null | -502033321 | true | NUZCBT | null | 0.43276042129899417 | LQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNP | - 46 23295 | GGCCG | AAGAC | Z | null | -1518612753 | null | null | null | 0.6671145728647582 | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO | - 47 23898 | TCAA | AGGG | O | null | 448265666 | false | GIUWTXHUDCOQYZFPZLVEDGKFHPAFTMIKDCK | null | 0.24165067951893648 | JURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPKSCNVRUE | - 48 24196 | AAGA | CCCT | G | null | 1626222045 | true | UDXOHXBODYUAKYGAHTLQELXYTJ | null | 0.32903298056413266 | IWXCNWIISITBTVMNPAYTHIPNCKCARBO | - 49 25181 | GTGG | CGTT | E | null | -1426293938 | true | IUOIHRTVRUYFUACKZH | null | null | GQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHKAV | - 50 25974 | GA | TG | S | null | 1729122195 | null | AUPORVJZTOJMMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYP | null | 0.20879455011120462 | RSBDIILLCGQGDPFJVTKNEZBOQHXUGGG | - 51 26128 | GGAC | CTGA | S | null | -2107939295 | true | GDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDD | null | 0.3465217480145627 | GISAKLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXY | - 52 26948 | GTTC | CGCT | I | null | 874276164 | false | null | null | 0.8700358952315721 | LUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCI | - 53 27123 | GAGTTG | TTCGGA | C | null | -1626430403 | false | OOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIVJGFPE | null | 0.4907299787684579 | ZPZQRZIACBFBDNF | - 54 27200 | TCCC | AGTG | null | null | 1628916152 | true | DAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRL | null | 0.20887152037949375 | IBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFERFVNVUBW | - 55 27870 | AT | CG | P | null | 918507005 | false | NSPEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFL | null | 0.7860384613677455 | THEUQCNVKQSNISLICNKDKOMR | - 56 28608 | GTT | AGG | null | null | 1578678272 | true | PVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGC | null | 0.6304197165537765 | MZPSCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZ | - 57 29523 | GGTG | TTCT | F | null | null | false | GCXSKCEDPKOLOTGKOBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCD | null | 0.8901803045759502 | PETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZKKCJCLUBGMVFISLNJICNTQ | - 58 29759 | CTAC | TGCG | F | null | 1755390814 | true | EUPCXSMJBZ | null | 0.10399455024155924 | OECXQBGSKUSCEPQAOEVABQVGYCHU | - 59 30240 | GAGC | CGTA | J | null | 245805235 | false | WQCTHQNXHDVMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBFWBJNI | null | 0.4726267810717161 | XQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXVZZIIIHFMWTOZMHCMXPFIOF | - 60 30670 | GTACTT | TAGGGA | S | null | 944514871 | true | CXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVEEFBCTJXH | null | 0.9717077606324023 | LDLEYBCIQCYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJB | - 61 30689 | GCGG | TATA | M | null | -2073219890 | true | CUBYQEBQREDVKQVRWCEFSWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCTNNB | null | 0.9472471024440868 | null | - 62 30947 | GTC | AAA | I | null | -667972054 | true | JEAODATZBRRLBEQPWOKOXK | null | null | F | - 63 31496 | TACC | ACTT | null | null | -1153848742 | false | WXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKE | null | 0.3776459242637572 | BOQDFQOSGIMGDVIDDYSIARMFNRXIDQWTWJFLQPICWLAKPWYRVDDYVZKYHEGNPULBRVHWTPPXLDCEUJVNDMTNWIV | - 64 31944 | TCTA | GGCG | B | null | 486774086 | false | PXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZ | null | 0.3695467993106807 | QDSIHADOFZLPCQVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWDKEYBUT | - 65 32434 | GGAAGG | ACCTCT | H | null | 1595589726 | false | IMHNAJEWWRVWIZSGQPVZGJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCK | null | 0.1196230872144961 | UODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLL | - 66 33205 | CG | GT | Q | null | -54864998 | false | MCMBEVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANB | null | null | HKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRGB | - 67 33771 | TGCCGC | ACTGAA | J | null | -899793151 | false | XHGUEQLVFIECDHCJEXBPZTNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFRVIOUHAVSYGXMMWZEJTKL | null | 0.1905641263105804 | ZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCB | - 68 34741 | TGATT | CAGAG | F | null | -1225579561 | true | CCUOEWSCGDK | null | 0.881650195389698 | YDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVT | - 69 35499 | CT | AG | K | null | -276395645 | false | null | null | 0.977751537018833 | ZPEPQWRMMWVETGLEKPBV | - 70 35546 | AT | CG | null | null | 2040100435 | true | ZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPN | null | 0.09037104358084358 | BSUHN | - 71 36433 | GGCT | ATGC | C | null | 168413364 | true | null | null | 0.1904413360563667 | JHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVSTFH | - 72 37416 | CG | TC | M | null | 1814030146 | true | DIISR | null | 0.27648269722880425 | JWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHH | - 73 38285 | AGC | TTA | D | null | -804208911 | null | OKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEP | null | 0.9198539785480527 | null | - 74 38361 | GCTGAC | AAACCT | G | null | null | false | SVPYLUIDGCGAOOIWYYNIQHONRKHLCUIXZZIYXHYQTEPKZ | null | 0.9186628435199452 | FHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPVYKONTTVCOQNLCWSMQUCH | - 75 38632 | CCTAGC | TAGGTT | J | null | -1928769563 | false | ZC | null | 0.12015177706912317 | PRCYFYRJ | - 76 39006 | TCG | ATC | S | null | -1435537229 | true | VSZPXVTNOEXWQQVTGTYHRY | null | 0.10825272757712423 | AEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTIDOMJAM | - 77 39326 | CTGG | GCCC | N | null | 1238244676 | false | RPGGYYEALD | null | 0.41559312842378404 | YXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZ | - 78 39616 | AT | GC | P | null | 193791099 | false | YTCT | null | 0.2178404304349859 | PFDYCFBWFIJOYSGWEIOFGIU | - 79 40139 | TGTAGT | CAGGTA | F | null | 928401180 | true | null | null | 0.4941678716122485 | GHUMR | - 80 40682 | AC | GA | null | null | -510409048 | false | GMJQZLJFYKYFBXNSVJTLWNHBEUMPEFUCIPJJNTHMLQTYJURKMRXYHDULOETRHFDJWPUVXZZYK | null | 0.6826290896912366 | GZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHX | - 81 40844 | GTTTC | CGCCG | M | null | 838024760 | true | UVO | null | 0.5626054761915171 | FDZCXTCGTGQRTIAPDDYSLBHDYOEYFHHKORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJL | - 82 41772 | TT | CG | null | null | -1963423867 | false | ZWMWLJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCM | null | 0.06821448380998862 | null | - 83 42405 | GGAGAT | CCGAGA | null | null | 599980869 | true | SVREX | null | 0.557000574778266 | BCCVLDOBFFIBXIWYNWPONALNRDOUUIZOZANCFSHJFAUVMFOZYUDRXIVXGAV | - 84 42798 | AAAT | CCTC | W | null | -433896788 | true | NNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURG | null | 0.8086382761333594 | null | - 85 43166 | TCCTT | GTGCG | P | null | -212160676 | false | DASKPMDBASJYUSZRTKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQ | null | 0.4004611468446073 | OL | - 86 43893 | TCAA | ATCG | A | null | -1842380129 | true | ALSCGAZOEWAOGVKFINKY | null | 0.6941442078114862 | null | - 87 44799 | CTATG | AATGA | C | null | 1518735330 | false | TEGAXQHZZKHNCPGXUCFAOCDFSUNIOOVESGTIPFVKUARMU | null | 0.035089348611912374 | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | - 88 44980 | ACACG | GGGGT | A | null | -1094185683 | true | DFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFF | null | 0.39624910302016625 | SOPTTCSZJSNBGPIFIBAHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIA | - 89 45514 | CTAGGG | GCTATT | C | null | 829369797 | true | FYBZVVKGXESMQRCAXYFQXIDFWSGDLLYEDQGNLLGTKZUZKDQYKPUXKE | null | 0.06802209908917545 | CIIEIJGPIYRYOKKJGWQFGMJFLHZAH | - 90 46164 | CTT | TGC | M | null | -814452473 | false | YGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJOCHYNCBMNZGHZDQIJCWDWAXBELONOYSMVTAGLUXLTSFSUXWPAZ | null | 0.7938675906527775 | | - 91 46724 | TTATGC | GGTAAA | P | null | 1882730814 | true | PTPSDIRXOPHWHAEEWOYVMXSLFZPIOTQNACNSNCHTLNYRRGIOERSJAEXC | null | 0.37844740748624583 | XIXGKFSRYQHMBXLWGDWVB | - 92 46735 | GACGC | TCTTG | G | null | 575014296 | false | OMCUHBNTWZFLRLFXDZVCSKRHFAO | null | 0.5133194346909566 | XNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJU | - 93 47404 | GACG | TTGA | V | null | 681339300 | true | ITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYRE | null | null | PBMUTRLSEYOQUBOR | - 94 48271 | GAGCG | TTTAT | Z | null | 300539013 | true | null | null | 0.936695453283102 | YURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJK | - 95 48812 | CT | GG | B | null | -538906411 | false | ERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHO | null | 0.7202708244462117 | DOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCI | - 96 49292 | TGGT | CACG | P | null | 2113525344 | false | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | null | null | null | - 97 49663 | TTCTA | GGTAG | H | null | -1954124469 | false | GKFGNIUNTJWMMJQHSKQ | null | null | YNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZA | - 98 49944 | TAAC | CGCA | G | null | -1858433447 | true | RVKVELGN | null | 0.8010342281968461 | IVYJCJCARHWGLTWGVOVBBSKLOOZKHCWJZYEZKSPMSDXYJXODFUCNQJPJJQLSMLNNQFYIWKZIB | - 99 50194 | CTT | TAC | Y | null | -944159107 | true | QYFRYGYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEHBWLJAJASVDEOFQVPOEGNJ | null | 0.06701482985829554 | YWMZAJHDQZT | - -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in org.snpsift.tests.unit.TestCasesDataFrameMnp -[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateTabix +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.012 s - in org.snpsift.tests.unit.TestCasesEnumArray +[INFO] Running org.snpsift.tests.unit.TestCasesAnnotate TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test TestCasesAnnotate.test_29_repeated_IDs(618): Test TestCasesAnnotate.test_01(145): Test @@ -3618,134 +3737,28 @@ TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test TestCasesAnnotate.test_27_repeat_db_entry(580): Test -[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 18.686 s - in org.snpsift.tests.unit.TestCasesAnnotateTabix -[INFO] Running org.snpsift.tests.unit.TestCasesVcfCheck -TestCasesVcfCheck.test_01(18): Test -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 s - in org.snpsift.tests.unit.TestCasesVcfCheck -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameDel -DataFrame: DEL, size: 100, current index: 100, memory: 63.4 KB - Field types: - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - ##INFO= - 0 130 | GACT | | G | null | -1436456258 | true | ZVMGTYMKSHHVG | null | null | | - 1 223 | CTGG | | X | null | null | false | NNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGU | null | null | PXBTJGJYGUPJF | - 2 545 | GTCG | | null | null | -1976073951 | false | QTLZADZBNDXVFRJHSDKMELBXLUSSYJ | null | 0.6940557826497827 | TLGZHNXJGLETAEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYE | - 3 1055 | AATGG | | E | null | -1010079021 | true | BOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGC | null | 0.8502834502384514 | FDXBCCKBLVOSVEUQFWTNZKBFUZYSRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOETZU | - 4 1446 | C | | T | null | 1403132403 | true | AUODCZNFMRXEWAMVAFWWRYGGOTPRSHRUNJEPJICSFDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXP | null | 0.39316353033715945 | FZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAA | - 5 1881 | TTGA | | T | null | null | false | TEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJCJOARSXBEQN | null | 0.13527063443116194 | RNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKGJWBPOXVODCKIZGLHJCVW | - 6 2563 | T | | T | null | null | false | UKJLUZTUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPOGDMTZPNIWMONL | null | 0.6240261637520885 | UFKFXCYZJXGYVICKOAMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFB | - 7 2947 | AAA | | B | null | 114930024 | false | FKUXNMTUYJPZYRUZCWFGZVEUUGMRBHYLGVDHQHETXOLCK | null | 0.07793307836710994 | EYMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVU | - 8 3347 | GTCT | | F | null | 845126422 | false | HEWEYJWJWQVRQKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJ | null | 0.6161471556789055 | DASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLAC | - 9 3983 | CTTCA | | Q | null | 468178437 | false | WQETIVGKEMLVCLMYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIV | null | 0.04108960045004717 | ZLCDFWYENCGBPHXSRWAOUSCYHUHU | - 10 4433 | GTAT | | O | null | 1130020054 | true | RYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLPAVTXNBSMPGICZ | null | 0.6382849215814441 | QMFXCKFYTNWGKENKRJLZXOP | - 11 4689 | TGC | | K | null | -445790332 | false | KBYZYNSNTPANSIGHYIAITLYHHFQBGATATIARJNANENEUPMRUWTMUTOOPMQNU | null | 0.7382253789492977 | MJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKK | - 12 5001 | GGG | | B | null | -1313067818 | true | RREBLEBHRQZRGEYWHCEBYNFJGRCAUIVMXQXRDXKNXIQFM | null | null | GYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYVCLDTIMJZUEMQPCYGQY | - 13 5198 | GGGTA | | Y | null | -1251908859 | false | SMSHLSHBDGHYGPIRBDKXCPUUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFT | null | 0.9167833442482675 | PFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDXXUOX | - 14 6041 | AT | | I | null | -6330919 | true | XGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQCNFNNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOVNOHLLTOINN | null | 0.3800326067140799 | KOXRNGJ | - 15 6581 | GGGG | | F | null | null | false | EDKUZSKCFJZPOWKBQYRYSGVHXBWNYGWXWV | null | 0.06012241070042468 | SFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRA | - 16 6936 | TTA | | A | null | 511856758 | false | YTWLRZOEZULNPISA | null | 0.896994305092103 | | - 17 7804 | GAACG | | F | null | -1272606888 | true | USOSSEKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMC | null | 0.7560910517289061 | CRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERP | - 18 8572 | TGG | | null | null | null | true | SNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQS | null | null | VPWIOXYXTHTYNYBDMMZVHXXWSJZQXNQOQTVATSQRUUCAK | - 19 8788 | AACGT | | O | null | 74880996 | false | MWLBJJADJNZBAVOBMTNXMJZATPEZATDQXXMYLARYBPGPAPLSOYBUKFPBAFIBSUFQU | null | 0.07910641251928785 | QREDBOCPCAQQYHVYMSZDYZ | - 20 9670 | TC | | U | null | -1276786925 | true | QO | null | 0.6263524583490568 | HZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDI | - 21 9827 | G | | R | null | null | true | TMUPXGOVUIDXQKLPRET | null | 0.018681289917958255 | WXBHOJWCYZUUUVSTMVQTOL | - 22 10693 | AC | | L | null | null | false | GVCFGVOADMYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJFXVP | null | 0.6111167283426931 | ZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQ | - 23 11663 | C | | S | null | -31088424 | true | VWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPN | null | 0.7531929524822482 | VRAGOTTXTCDDIXWJJSJYHEWHKXIGPL | - 24 12601 | GGCC | | Z | null | null | false | XPCVBJPSNJTEHOWCPZLVRQWDHOY | null | 0.31339935880017655 | YJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXL | - 25 13072 | AAC | | U | null | 1330843747 | true | GYMIELVHMRKLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPBUDSQGLOBMZVVFLNSWMQXUCJ | null | 0.4692113581027457 | NLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMU | - 26 13867 | GCC | | G | null | null | false | XP | null | 0.22199844675396851 | NZQEAQKWLSYJMMVQSQTSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTF | - 27 13962 | GAG | | L | null | 146571832 | null | MOPIMPXRLKAIE | null | 0.510346538643695 | FPGVRPBBCUZUTIRNMBZQIBPCTGQWJECWFMMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOIT | - 28 14288 | GTC | | H | null | 1548333524 | false | UXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPPNBVRPSISCUD | null | 0.07446599626789219 | NSDERCMAIXBNIQRIEMDHOQFQ | - 29 14851 | CC | | null | null | -1696167297 | null | HXJDPHXFJUVINTKURUNTGXBCRIYGMXGLYBFIHLNCHA | null | 0.0799845503474157 | WIMEDVXAMQMWWROUPEHPKRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJ | - 30 14999 | TGTTC | | Y | null | -522360497 | false | TLMHBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZSOSWWVMRPXNYNXLQTNZOAMMXFPMGJWHVBMIISK | null | 0.5344552293903443 | QQWZBPWGGGPCOYIRUODLHHZGLMBQAJLGCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVSUERWOAEHZWLS | - 31 15537 | GACGA | | S | null | -578434703 | false | OMZVWXWMONE | null | 0.8251475537214046 | BGIV | - 32 15731 | ATAC | | null | null | 400671947 | null | HTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZQAMTRPVRWF | null | 0.5579494955102167 | YIKDTO | - 33 15777 | GCT | | M | null | -319681430 | false | DSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJ | null | 0.3831246943809442 | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW | - 34 16236 | AACCC | | L | null | -1117096939 | true | COUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMY | null | 0.17249805940518959 | RSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXRGCNLDFIXNZUPCZBSDO | - 35 16372 | C | | W | null | 1179462312 | true | EZAYOPAVIWWDSBKGVIERZVVKW | null | 0.985450039923121 | FJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUYTHQCHTPHGWMYYPIWPAHZMSNEIIVXNKHDI | - 36 17216 | G | | N | null | -1055384584 | true | PSQQOQTKLV | null | 0.06566831133672113 | SVAQLBASZKUOAQXSZYHTFPESQNYFKQ | - 37 17785 | ACGCT | | null | null | -298680206 | false | COPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUO | null | 0.9217536754688332 | UYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYB | - 38 18277 | AA | | I | null | -863116862 | true | null | null | 0.5623763340669743 | JDTKELPQHQDIEBEXBHJFIMPP | - 39 18468 | AT | | N | null | 1924436227 | true | WCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRHFHNQ | null | 0.1749105387303984 | VRJUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKE | - 40 18910 | CCCCG | | Q | null | -2031335518 | false | LAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDP | null | 0.11273244680001182 | OPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDK | - 41 18931 | T | | W | null | 1899206506 | false | VGKGUNPFZAZQHYKIPFDMLTTAXEEGFQ | null | 0.4671423995923216 | RUGBQXLOOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCL | - 42 19089 | CC | | R | null | 1118819099 | false | DQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXC | null | 0.4478386559636307 | LWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNRRWSWPOQJYEQWTHBQXHRKWBEPZCHIAW | - 43 19894 | CCCTA | | N | null | -605014644 | false | null | null | 0.7303047459316435 | BPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXAD | - 44 20045 | ACGA | | C | null | null | false | WALBHBZSDNPAZQNUZCBTVECALPBVRYGCTNGWNEHDQFNZRIJLEGPLJGZK | null | 0.8179955180515363 | INSSHZSFLFTPMDXIFUGVSFLODMYZHILGJSYHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDM | - 45 20405 | CCTT | | Y | null | -1514625439 | true | JURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPKSCNVRUE | null | null | DVQTYZFJUUCLNKWXYBNONXNRMRDSFQOYVQPTTMGBOOHSFO | - 46 20912 | GGCA | | O | null | 1616307207 | false | null | null | null | VEDGKFHPAFTMIKDCKWPZQGZKFCTREWKRHVHNGEOUBUIDIWX | - 47 21794 | GCA | | T | null | -1227593025 | false | HTLQ | null | 0.2772271069547678 | ARBOCHEUDXOHXBODYUAK | - 48 22268 | CGAGT | | T | null | -284068841 | true | AVFTWIUOIHRTVRUYFU | null | 0.31929058625899376 | WXUAUUEGQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJO | - 49 23112 | GAAT | | K | null | null | false | MMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYPKJPUATVBR | null | null | OSJTUIFRSBDIILLCGQGDPFJVTKNEZBOQHXUGGGGXVAUPORVJZ | - 50 24097 | ATAGC | | I | null | -598926481 | true | VEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCYEASQAPHIVZCCVYKLU | null | 0.21927388862578912 | KLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGH | - 51 25083 | AC | | G | null | -293064464 | false | QDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCY | null | 0.747238647577231 | UZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQTZGEERZXKCHCR | - 52 25744 | CG | | E | null | -1360501385 | false | WKGGQCSTRTLHEEGLMSAWQ | null | 0.024172844226171386 | BAQBCZIHQFIGJUIQDVGBKH | - 53 26411 | G | | F | null | -1304874868 | false | BLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRL | null | 0.6860774121795407 | ASDAKTYBU | - 54 27081 | A | | W | null | -1161853101 | true | ZPSCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIE | null | 0.21385656542785914 | KVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQDLSFTT | - 55 27218 | CT | | O | null | -1894851746 | false | NHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGCJJCHZAJAJHIZFPZJVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJU | null | 0.6536096755688723 | KVJRPQASSROBWVZDJKOCRCYMTXUBTD | - 56 27282 | AGATT | | F | null | 884228440 | true | OBSMKUXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSM | null | 0.2686316223942542 | NTQKOCGCXSKCEDPKOLOTGKOBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCDAW | - 57 27641 | GGGGA | | T | null | 1676893454 | true | ZZIIIHFMWTOZMHCMXPF | null | 0.8439224234714445 | WCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDX | - 58 28077 | CGTG | | D | null | -1203020043 | false | AQJJKHDMASERCYWAWE | null | 0.710936431698637 | NQ | - 59 29035 | G | | Q | null | -609488607 | true | DSDUABTFOWDJHCNWEFLH | null | 0.911924838137379 | RQGBFWBJNIIFD | - 60 29911 | CT | | L | null | -2089153437 | false | GOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJBEALCXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIB | null | null | YAOLFVXWCCSCLZTPSWEZOISZ | - 61 30667 | CTT | | V | null | -1973450833 | true | null | null | 0.9012258507873285 | XHBDBIDKXPHFOTFRATSTVGMMNADVITT | - 62 31223 | AA | | K | null | -1755477375 | false | XKFCDSZTVBKMHRHBLGOAIHYNPLTFNBOQDFQOSGIMGDVIDDYSIARM | null | null | SWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRLBEQPW | - 63 31496 | TG | | Q | null | 1180677504 | false | XNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPH | null | 0.984760373484259 | PWYRVDDYVZKYHEGNPULBRVHWTPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJF | - 64 32187 | ATA | | S | null | -724345447 | true | BMFPHNELKLQQTKDBYWMMMLOMWDKEYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHU | null | 0.8850906678117744 | LPCQVYZEB | - 65 32391 | C | | L | null | -875561924 | true | UODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLL | null | 0.3715021908115971 | | - 66 32515 | GTAG | | I | null | -375267285 | false | OKWRVKHVYQCQKXUPYHKVOPSCJY | null | 0.5900730230722597 | GJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCKV | - 67 32590 | G | | Y | null | 1514413576 | true | EVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANBMVAX | null | 0.7341836835763552 | IJKMWIEKPDQQBBTBRGBKZFM | - 68 32667 | G | | T | null | 797572977 | false | PSXDXCZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJN | null | 0.5332105043498733 | null | - 69 32820 | A | | E | null | -415835914 | false | TNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFR | null | 0.1335174125223052 | VFIECDHCJEX | - 70 33205 | A | | M | null | 520142376 | true | KTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWS | null | 0.43211074741851097 | GQIGRWFRRQPOKVFNLUBIYFBAUNPDVYD | - 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77 37602 | C | | V | null | 298122992 | true | WXGFKDELXIPNUBIQSXJ | null | null | L | - 78 38525 | AAGAA | | L | null | -1359626233 | true | ELTXVWYOGYCNFDSSXEVDGHUMRBM | null | 0.40993593188707933 | PDBXOVSQDYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWX | - 79 39068 | A | | C | null | 313119412 | null | MIINDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNS | null | 0.8811611289359326 | CUYVGZRUCWQPBGBNWRLKDJ | - 80 39391 | TG | | P | null | 387521435 | true | YHDULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAPDDYSLBHDYOEYF | null | null | JNTHMLQTYJURK | - 81 39810 | ACA | | C | null | 1317623748 | false | DQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXI | null | 0.027280066900205235 | VNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNVOZY | - 82 40464 | CTA | | U | null | 1991019784 | false | SXFJCAXCGZKZKGXUYPFWXONPKQUQOCSOLGKFDASKPMDBASJYUSZRTKHCHMKEYI | null | 0.5232752681520697 | FSHJFAUVMFOZYUDRXIVXGAVYBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFWSDUVNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLV | - 83 41358 | G | | O | null | -2110428431 | false | CGAZOEWAOGVKFINKYIWQ | null | 0.03010634590247585 | TZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQLGWRORVMYYKPYAMAZCXGYJC | - 84 41616 | TGCC | | E | null | 653352657 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.08956523678408113 | QTH | - 85 42111 | GGCA | | C | null | 930835808 | false | CSZJSNBGPIFIBAHZYTPMRBM | null | 0.47953341288935725 | OCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSO | - 86 42781 | CGCTC | | U | null | 55021129 | false | SXUNGJITKBVEEPVVKXCSIXIBPDC | null | 0.5073404006748695 | IAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFFAYFMRF | - 87 43117 | GGC | | J | null | 261156548 | true | IDFWSGDLLYEDQGNLLGTKZUZKDQYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJO | null | 0.37878537991521044 | FLHZAHXAQFYBZVVKGXESMQRCAXY | - 88 43943 | ATTC | | I | null | null | true | LONOYSMVTAGLUXLTSFSUXWPAZCGDEZLOURIYYLWILVSA | null | 0.2964646286340923 | null | - 89 44547 | TGGGC | | null | null | null | true | IOTQNACNSNCHTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWLGGNHMAZQXNOKCAAFLMKMAPJWDQ | null | 0.457479396913271 | HMBXLWGDWVBAGMPTPSDIRXOPHWHAEEWOYVMXSL | - 90 44874 | CTCA | | U | null | null | true | VCSKRHFAOHYQEROWK | null | 0.4893857531586706 | YWNTPMJUZMHOMCUHBNTWZFLRLF | - 91 45789 | T | | V | null | null | true | ITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYRE | null | null | PBMUTRLSEYOQUBOR | - 92 46656 | GAGC | | K | null | -682714045 | false | NJIVKSVNASIVIN | null | 0.21036323577585736 | IREOPSNYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJKZFBXWMPOBPUCQYYNYRBIIEWXCXDOUIHQBODOZVZ | - 93 47481 | G | | J | null | 2004630449 | true | HIIRGLTWABTAHOQZHIYVYWSNZY | null | 0.19726006900984927 | HROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCIOHYERXDZFDWPGMMPWASXLF | - 94 48439 | C | | N | null | -986666946 | null | ZMKACPDAVPUPUFOKMOHRRYEWXXYNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZAUQLGKFGNIUNT | null | 0.5498634898012835 | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | - 95 48708 | CCA | | S | null | -907643995 | false | RQZFIVYJCJCARHWGLTWGVOVBBSKLO | null | 0.8043326769484491 | RBIEZVEAOMG | - 96 49276 | TG | | P | null | -2066998677 | null | I | null | 0.7177010134014864 | JXODFUCNQJPJJQLSMLNNQFYI | - 97 49401 | CGG | | B | null | -257772742 | true | TNFMNZYQCDRJILYWMZAJHDQZTNWQQYFRYGYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEHBWLJAJASVDEOF | null | 0.4607268875015176 | null | - 98 49907 | CAC | | P | null | 966658647 | true | KGDJSHWQNTLSEYGZ | null | 0.6885368220839251 | GTPFQOWDDNZNFTEUCOAEOMVYXBUMZTNLV | - 99 50128 | CA | | E | null | 128095220 | false | NUJYTDVTSDBWKWGYBDKAHAQERJYIGNHYAUFUMIMLNOFPVQJAFDXGIRWIXOBXA | null | 0.4811475357641687 | ZGKNAOXKXJTBFDIJHRUHLXSCTNALYGQVYKSHPRPBNLLZYRIMNEOBUKWLLZRFRXCBJ | - -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in org.snpsift.tests.unit.TestCasesDataFrameDel -[INFO] Running org.snpsift.tests.unit.TestCasesSplit -TestCasesSplit.test_01(28): Test -TestCasesSplit.test_02(58): Test -TestCasesSplit.test_03(84): Test -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.08 s - in org.snpsift.tests.unit.TestCasesSplit -[INFO] Running org.snpsift.tests.unit.TestCasesIndex -TestCasesIndex.test_01(32): Test -TestCasesIndex.test_02(84): Test -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.694 s - in org.snpsift.tests.unit.TestCasesIndex -[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnLong -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.348 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnLong +[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 160.819 s - in org.snpsift.tests.unit.TestCasesAnnotate +[INFO] Running org.snpsift.tests.unit.TestCasesFilterChrPos +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.088 s - in org.snpsift.tests.unit.TestCasesFilterChrPos +[INFO] Running org.snpsift.tests.unit.TestCasesCaseControl +TestCasesCaseControl.test_01(53): Test +TestCasesCaseControl.test_02(65): Test +TestCasesCaseControl.test_03(83): Test +TestCasesCaseControl.test_04(107): Test +TestCasesCaseControl.test_05(119): Test +TestCasesCaseControl.test_06(125): Test +TestCasesCaseControl.test_07(131): Test +TestCasesCaseControl.test_08(137): Test +TestCasesCaseControl.test_09(146): Test +TestCasesCaseControl.test_10(222): Test +TestCasesCaseControl.test_02_Str2(77): Test +TestCasesCaseControl.test_03_Str2(95): Test +TestCasesCaseControl.test_03_Str3(101): Test +TestCasesCaseControl.test_01_Str(59): Test +TestCasesCaseControl.test_02_Str(71): Test +TestCasesCaseControl.test_03_Str(89): Test +TestCasesCaseControl.test_04_Str(113): Test +[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.971 s - in org.snpsift.tests.unit.TestCasesCaseControl [INFO] Running org.snpsift.tests.unit.TestCasesGwasCatalog TestCasesGwasCatalog.test_01(34): Test WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '19:16185558' already exists @@ -3776,8 +3789,26 @@ WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists WARNING_DUPLICATE_PRIMARY_KEY: Too many 'WARNING_DUPLICATE_PRIMARY_KEY' warnings, no further warnings will be shown. TestCasesGwasCatalog.test_02(50): Test -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.728 s - in org.snpsift.tests.unit.TestCasesGwasCatalog -[INFO] Running org.snpsift.tests.unit.TestCasesAnnotate +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.618 s - in org.snpsift.tests.unit.TestCasesGwasCatalog +[INFO] Running org.snpsift.tests.unit.TestCasesFilterGt +TestCasesFilterGt.test_01(28): Test +TestCasesFilterGt.test_02(62): Test +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.034 s - in org.snpsift.tests.unit.TestCasesFilterGt +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnFloat +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.754 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnFloat +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnChar +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.101 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnChar +[INFO] Running org.snpsift.tests.unit.TestCasesGt +TestCasesGt.test_01(25): Test +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.723 s - in org.snpsift.tests.unit.TestCasesGt +[INFO] Running org.snpsift.tests.unit.TestCasesHwe +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.036 s - in org.snpsift.tests.unit.TestCasesHwe +[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnInt +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.38 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnInt +[INFO] Running org.snpsift.tests.unit.TestCasesGeneSets +TestCasesGeneSets.test_01(25): Test +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.152 s - in org.snpsift.tests.unit.TestCasesGeneSets +[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateUseIndex TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test TestCasesAnnotate.test_29_repeated_IDs(618): Test TestCasesAnnotate.test_01(145): Test @@ -3820,7 +3851,12 @@ TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test TestCasesAnnotate.test_27_repeat_db_entry(580): Test -[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 17.766 s - in org.snpsift.tests.unit.TestCasesAnnotate +[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 98.846 s - in org.snpsift.tests.unit.TestCasesAnnotateUseIndex +[INFO] Running org.snpsift.tests.unit.TestCasesVariantDatabase +1 1000 . A T . . ZZZ_FIELD_FLOAT=3.14;ZZZ_FIELD_STRING=Value1;ZZZ_FIELD_FLAG=false;ZZZ_FIELD_INT=123 +[ZZZ_FIELD_FLOAT, ZZZ_FIELD_FLAG, ZZZ_FIELD_INT, ZZZ_FIELD_STRING] +[FIELD_FLOAT, FIELD_STRING, FIELD_FLAG, FIELD_INT] +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.045 s - in org.snpsift.tests.unit.TestCasesVariantDatabase [INFO] [INFO] Results: [INFO] @@ -3829,8 +3865,8 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 03:34 min -[INFO] Finished at: 2025-12-03T03:19:22-12:00 +[INFO] Total time: 22:52 min +[INFO] Finished at: 2024-10-31T23:33:59+14:00 [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_prep @@ -3854,11 +3890,11 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 0.396 s -[INFO] Finished at: 2025-12-03T03:19:23-12:00 +[INFO] Total time: 4.534 s +[INFO] Finished at: 2024-10-31T23:34:14+14:00 [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -plibsnpsift-java --javadoc --base-directory=/build/reproducible-path/snpsift-5.2.e\+dfsg --non-explore -Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom +Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21] Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>". at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652) @@ -3874,7 +3910,7 @@ at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107) at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:907) -Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom +Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21] Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>". at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652) @@ -3890,7 +3926,7 @@ at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107) at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:907) -Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom +Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21] Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>". at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652) @@ -3906,7 +3942,7 @@ at org.debian.maven.packager.DependenciesSolver.solveDependencies(DependenciesSolver.java:237) at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:922) -Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom +Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21] Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>". at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652) @@ -3962,8 +3998,8 @@ dpkg-gencontrol: warning: package libsnpsift-java-doc: substitution variable ${maven:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'libsnpsift-java' in '../libsnpsift-java_5.2.e+dfsg-1_all.deb'. dpkg-deb: building package 'snpsift' in '../snpsift_5.2.e+dfsg-1_all.deb'. +dpkg-deb: building package 'libsnpsift-java' in '../libsnpsift-java_5.2.e+dfsg-1_all.deb'. dpkg-deb: building package 'libsnpsift-java-doc' in '../libsnpsift-java-doc_5.2.e+dfsg-1_all.deb'. dpkg-genbuildinfo --build=binary -O../snpsift_5.2.e+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -O../snpsift_5.2.e+dfsg-1_amd64.changes @@ -3972,12 +4008,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1954378/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3641472 and its subdirectories -I: Current time: Wed Dec 3 03:19:57 -12 2025 -I: pbuilder-time-stamp: 1764775197 +I: removing directory /srv/workspace/pbuilder/1954378 and its subdirectories +I: Current time: Thu Oct 31 23:35:30 +14 2024 +I: pbuilder-time-stamp: 1730367330