Diff of the two buildlogs: -- --- b1/build.log 2024-08-19 17:01:24.821279364 +0000 +++ b2/build.log 2024-08-19 17:08:40.346783705 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Aug 19 04:48:50 -12 2024 -I: pbuilder-time-stamp: 1724086130 +I: Current time: Mon Sep 22 13:24:26 +14 2025 +I: pbuilder-time-stamp: 1758497066 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -31,52 +31,84 @@ dpkg-source: info: applying htslib-1.20.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/508743/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 21 23:24 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='3dd4fb43fd30468ba81e830a4054db44' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='508743' - PS1='# ' - PS2='> ' + INVOCATION_ID=d0902f07ee2d47b9b161becdaed041c9 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=40339 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.k5JGvJ64/pbuilderrc_CClj --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.k5JGvJ64/b1 --logfile b1/build.log python-pysam_0.22.1+ds-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.k5JGvJ64/pbuilderrc_5p3s --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.k5JGvJ64/b2 --logfile b2/build.log python-pysam_0.22.1+ds-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.9.7+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1~bpo12+1 (2024-07-03) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/508743/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -251,7 +283,7 @@ Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.2-1 [249 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 samtools amd64 1.20-3 [653 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 tabix amd64 1.20+ds-1 [483 kB] -Fetched 56.9 MB in 4s (14.1 MB/s) +Fetched 56.9 MB in 1s (44.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19725 files and directories currently installed.) @@ -652,8 +684,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Aug 19 16:50:07 UTC 2024. -Universal Time is now: Mon Aug 19 16:50:07 UTC 2024. +Local time is now: Sun Sep 21 23:25:43 UTC 2025. +Universal Time is now: Sun Sep 21 23:25:43 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -756,7 +788,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-pysam-0.22.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-pysam_0.22.1+ds-2_source.changes +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-pysam-0.22.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-pysam_0.22.1+ds-2_source.changes dpkg-buildpackage: info: source package python-pysam dpkg-buildpackage: info: source version 0.22.1+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -836,12 +872,12 @@ running build running build_py creating /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam -copying pysam/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam -copying pysam/Pileup.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam +copying pysam/bcftools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam copying pysam/config.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam +copying pysam/Pileup.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam copying pysam/samtools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam copying pysam/version.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam -copying pysam/bcftools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam +copying pysam/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam copying pysam/utils.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam creating /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include copying pysam/include/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include @@ -1636,7 +1672,7 @@ dd if=ex2.bam of=ex2_truncated.bam bs=$((`wc -c < ex2.bam`-512)) count=1 1+0 records in 1+0 records out -122288 bytes (122 kB, 119 KiB) copied, 0.000570712 s, 214 MB/s +122288 bytes (122 kB, 119 KiB) copied, 0.00020006 s, 611 MB/s (bgzip -d < ex2.bam; printf '\37\0\0\0\1\0\0\0') | bgzip > ex2_corrupt.bam grep "^@" ex2.sam | samtools view --no-PG -bo empty.bam - samtools index empty.bam @@ -1864,20 +1900,20 @@ tests/AlignmentFileHeader_test.py::TestHeaderCRAM::test_header_content_is_as_expected PASSED tests/AlignmentFileHeader_test.py::TestHeaderCRAM::test_name_mapping PASSED tests/AlignmentFileHeader_test.py::TestHeaderCRAM::test_text_access_works PASSED -tests/AlignmentFileHeader_test.py::TestHeaderWriteRead::test_BAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_18zi5je_ +tests/AlignmentFileHeader_test.py::TestHeaderWriteRead::test_BAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_egwk6fir PASSED -tests/AlignmentFileHeader_test.py::TestHeaderWriteRead::test_CRAM [E::cram_index_load] Could not retrieve index file for '/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_5yvnpj4q' -/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_5yvnpj4q +tests/AlignmentFileHeader_test.py::TestHeaderWriteRead::test_CRAM [E::cram_index_load] Could not retrieve index file for '/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_5lqkuevd' +/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_5lqkuevd PASSED -tests/AlignmentFileHeader_test.py::TestHeaderWriteRead::test_SAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_sjdwq5y2 +tests/AlignmentFileHeader_test.py::TestHeaderWriteRead::test_SAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_xonp0cdv PASSED -tests/AlignmentFileHeader_test.py::TestHeaderLargeContigs::test_BAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_jij_sdb8 +tests/AlignmentFileHeader_test.py::TestHeaderLargeContigs::test_BAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_r3zxhk4v PASSED tests/AlignmentFileHeader_test.py::TestHeaderLargeContigs::test_CRAM [W::sanitise_SQ_lines] Header @SQ length mismatch for ref chr1, 2147483647 vs 1575 -[E::cram_index_load] Could not retrieve index file for '/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_3trqwsxg' -/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_3trqwsxg +[E::cram_index_load] Could not retrieve index file for '/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_osfasewx' +/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_osfasewx PASSED -tests/AlignmentFileHeader_test.py::TestHeaderLargeContigs::test_SAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_6w4vugp_ +tests/AlignmentFileHeader_test.py::TestHeaderLargeContigs::test_SAM /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_check_read_write_su8hwnp2 PASSED tests/AlignmentFilePileup_test.py::TestPileupReadSelection::test_all_stepper PASSED tests/AlignmentFilePileup_test.py::TestPileupReadSelection::test_ignore_overlaps PASSED @@ -2536,7 +2572,7 @@ tests/VariantFile_test.py::TestSettingRecordValues::testSetQual [W::vcf_parse] Contig 'M' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED tests/VariantFile_test.py::TestMultiThreading::testNoMultiThreadingWithIgnoreTruncation PASSED -tests/VariantFile_test.py::TestMultiThreading::testSingleThreadEqualsMultithreadResult [E::idx_find_and_load] Could not retrieve index file for '/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_testSingleThreadEqualsMultithreadResult_2v3gql77.bcf' +tests/VariantFile_test.py::TestMultiThreading::testSingleThreadEqualsMultithreadResult [E::idx_find_and_load] Could not retrieve index file for '/build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/tests/tmp/pysamtests_tmp_testSingleThreadEqualsMultithreadResult_an4r6lw_.bcf' PASSED tests/VariantFile_test.py::TestSubsetting::testSubsetting PASSED tests/VariantFile_test.py::TestVCFVersions::test_all_records_can_be_fetched [W::vcf_parse] Contig 'M' is not defined in the header. (Quick workaround: index the file with tabix.) @@ -2676,121 +2712,159 @@ tests/tabix_test.py::TestVCFFromTabix::testWrite PASSED tests/tabix_test.py::TestVCFFromVCF::testConnecting PASSED tests/tabix_test.py::TestVCFFromVCF::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_3::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_3::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_3::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_3::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_4::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_4::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_4::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_4::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_22::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_22::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_22::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_22::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_15::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_15::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_15::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_15::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_6::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_6::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_6::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_6::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_9::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_9::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_9::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_9::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_11::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_11::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_11::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_11::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_20::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_20::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_20::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_20::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_5::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_5::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_5::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_5::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_7::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_7::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_7::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_7::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_18::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_18::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_18::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_18::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_vcf_v42::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_vcf_v42::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_vcf_v42::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_vcf_v42::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_23::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_23::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_23::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_23::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_13::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_13::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_13::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_13::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_8::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_8::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_8::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_8::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_24::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_24::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_24::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_24::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_3::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_3::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_3::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_3::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_15::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_15::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_15::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_15::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_7::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_7::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_7::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_7::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_9::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_9::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_9::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_9::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_2::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_2::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_2::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_2::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_13::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_13::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_13::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_13::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_23::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_23::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_23::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_23::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_12::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_12::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_12::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_12::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_10::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_10::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_10::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_10::testParsing PASSED -tests/tabix_test.py::VCFFromTabixTest_issue85::testRead PASSED -tests/tabix_test.py::VCFFromTabixTest_issue85::testWrite PASSED -tests/tabix_test.py::VCFFromVCFTest_issue85::testConnecting PASSED -tests/tabix_test.py::VCFFromVCFTest_issue85::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_16::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_16::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_16::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_16::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_18::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_18::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_18::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_18::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_issue85::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_issue85::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_issue85::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_issue85::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_24::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_24::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_24::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_24::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_6::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_6::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_6::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_6::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_vcf_v42::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_vcf_v42::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_vcf_v42::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_vcf_v42::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_11::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_11::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_11::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_11::testParsing PASSED tests/tabix_test.py::VCFFromTabixTest_21::testRead PASSED tests/tabix_test.py::VCFFromTabixTest_21::testWrite PASSED tests/tabix_test.py::VCFFromVCFTest_21::testConnecting PASSED tests/tabix_test.py::VCFFromVCFTest_21::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_4::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_4::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_4::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_4::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_10::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_10::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_10::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_10::testParsing PASSED +tests/tabix_test.py::VCFFromTabixTest_5::testRead PASSED +tests/tabix_test.py::VCFFromTabixTest_5::testWrite PASSED +tests/tabix_test.py::VCFFromVCFTest_5::testConnecting PASSED +tests/tabix_test.py::VCFFromVCFTest_5::testParsing PASSED tests/tabix_test.py::TestVCFFromVariantFile::testConnecting PASSED tests/tabix_test.py::TestVCFFromVariantFile::testParsing [W::vcf_parse] Contig 'M' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse] Contig '17' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED -tests/tabix_test.py::TestVCFFromVariantFile_3::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_3::testParsing [W::vcf_parse] Contig '1' is not defined in the header. (Quick workaround: index the file with tabix.) -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_4::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_4::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:249843 is not defined in the header, assuming Type=String -PASSED tests/tabix_test.py::TestVCFFromVariantFile_22::testConnecting PASSED tests/tabix_test.py::TestVCFFromVariantFile_22::testParsing [W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse_info] INFO 'refseq.name' is not defined in the header, assuming Type=String [W::vcf_parse_info] INFO 'refseq.positionType' is not defined in the header, assuming Type=String [W::vcf_parse] Contig 'chr2' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED +tests/tabix_test.py::TestVCFFromVariantFile_20::testConnecting [W::bcf_hdr_register_hrec] The definition of Flag "INFO/NotCalledInValidationSamples" is invalid, forcing Number=0 +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_20::testParsing [W::bcf_hdr_register_hrec] The definition of Flag "INFO/NotCalledInValidationSamples" is invalid, forcing Number=0 +[W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_13::testConnecting [W::bcf_hrec_check] Invalid tag name: "1000g" +[W::bcf_hrec_check] Invalid tag name: "GT:GL:GQ:NR" +[W::bcf_hdr_check_sanity] GL should be declared as Number=G +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_13::testParsing [W::bcf_hrec_check] Invalid tag name: "1000g" +[W::bcf_hrec_check] Invalid tag name: "GT:GL:GQ:NR" +[W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_info] INFO 'MMLQ' is not defined in the header, assuming Type=String +[W::vcf_parse] Contig 'chr10' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr11' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr12' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr13' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr14' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr15' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr16' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr17' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr17_gl000205_random' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr18' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr19' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr2' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr21' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr22' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr3' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr4' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr5' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr6' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr7' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr8' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chr9' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chrUn_gl000214' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chrUn_gl000220' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chrUn_gl000225' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse] Contig 'chrX' is not defined in the header. (Quick workaround: index the file with tabix.) +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_8::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_8::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:676148 is not defined in the header, assuming Type=String +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_3::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_3::testParsing [W::vcf_parse] Contig '1' is not defined in the header. (Quick workaround: index the file with tabix.) +PASSED tests/tabix_test.py::TestVCFFromVariantFile_15::testConnecting PASSED tests/tabix_test.py::TestVCFFromVariantFile_15::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse_format_dict2] FORMAT 'GT' at 20:439104 is not defined in the header, assuming Type=String PASSED -tests/tabix_test.py::TestVCFFromVariantFile_6::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_6::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_info] INFO 'CallSetAC' is not defined in the header, assuming Type=String -[W::vcf_parse_info] INFO 'CallSetAC2' is not defined in the header, assuming Type=String -[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:669442 is not defined in the header, assuming Type=String +tests/tabix_test.py::TestVCFFromVariantFile_7::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_7::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:249843 is not defined in the header, assuming Type=String PASSED tests/tabix_test.py::TestVCFFromVariantFile_9::testConnecting PASSED tests/tabix_test.py::TestVCFFromVariantFile_9::testParsing [W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) @@ -2823,25 +2897,15 @@ [W::vcf_parse] Contig 'chr16' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse] Contig 'chr17' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED -tests/tabix_test.py::TestVCFFromVariantFile_11::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_11::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:669442 is not defined in the header, assuming Type=String -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_20::testConnecting [W::bcf_hdr_register_hrec] The definition of Flag "INFO/NotCalledInValidationSamples" is invalid, forcing Number=0 -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_20::testParsing [W::bcf_hdr_register_hrec] The definition of Flag "INFO/NotCalledInValidationSamples" is invalid, forcing Number=0 -[W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_5::testConnecting [W::bcf_hdr_check_sanity] GL should be declared as Number=G -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_5::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +tests/tabix_test.py::TestVCFFromVariantFile_2::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_2::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_info] INFO 'sumGLbyD' is not defined in the header, assuming Type=String PASSED -tests/tabix_test.py::TestVCFFromVariantFile_7::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_7::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:249843 is not defined in the header, assuming Type=String +tests/tabix_test.py::TestVCFFromVariantFile_23::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_23::testParsing [W::vcf_parse_info] INFO 'sumGLbyD' is not defined in the header, assuming Type=String PASSED -tests/tabix_test.py::TestVCFFromVariantFile_18::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_18::testParsing [W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) +tests/tabix_test.py::TestVCFFromVariantFile_12::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_12::testParsing [W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse_info] INFO 'DP' is not defined in the header, assuming Type=String [W::vcf_parse_info] INFO 'AF1' is not defined in the header, assuming Type=String [W::vcf_parse_info] INFO 'CI95' is not defined in the header, assuming Type=String @@ -2871,60 +2935,12 @@ [W::vcf_parse] Contig 'chr16' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse] Contig 'chr17' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED -tests/tabix_test.py::TestVCFFromVariantFile_vcf_v42::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_vcf_v42::testParsing PASSED -tests/tabix_test.py::TestVCFFromVariantFile_23::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_23::testParsing [W::vcf_parse_info] INFO 'sumGLbyD' is not defined in the header, assuming Type=String -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_8::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_8::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:676148 is not defined in the header, assuming Type=String -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_24::testConnecting [E::bcf_hdr_parse_sample_line] Could not parse the "#CHROM.." line, either the fields are incorrect or spaces are present instead of tabs: - #CHROM POS ID REF ALT QUAL FILTER INFO - -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_24::testParsing PASSED -tests/tabix_test.py::TestVCFFromVariantFile_2::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_2::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +tests/tabix_test.py::TestVCFFromVariantFile_16::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_16::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse_info] INFO 'sumGLbyD' is not defined in the header, assuming Type=String PASSED -tests/tabix_test.py::TestVCFFromVariantFile_13::testConnecting [W::bcf_hrec_check] Invalid tag name: "1000g" -[W::bcf_hrec_check] Invalid tag name: "GT:GL:GQ:NR" -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_13::testParsing [W::bcf_hrec_check] Invalid tag name: "1000g" -[W::bcf_hrec_check] Invalid tag name: "GT:GL:GQ:NR" -[W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_info] INFO 'MMLQ' is not defined in the header, assuming Type=String -[W::vcf_parse] Contig 'chr10' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr11' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr12' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr13' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr14' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr15' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr16' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr17' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr17_gl000205_random' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr18' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr19' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr2' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr21' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr22' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr3' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr4' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr5' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr6' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr7' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr8' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chr9' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chrUn_gl000214' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chrUn_gl000220' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chrUn_gl000225' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse] Contig 'chrX' is not defined in the header. (Quick workaround: index the file with tabix.) -PASSED -tests/tabix_test.py::TestVCFFromVariantFile_12::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_12::testParsing [W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) +tests/tabix_test.py::TestVCFFromVariantFile_18::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_18::testParsing [W::vcf_parse] Contig 'chr1' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse_info] INFO 'DP' is not defined in the header, assuming Type=String [W::vcf_parse_info] INFO 'AF1' is not defined in the header, assuming Type=String [W::vcf_parse_info] INFO 'CI95' is not defined in the header, assuming Type=String @@ -2954,22 +2970,42 @@ [W::vcf_parse] Contig 'chr16' is not defined in the header. (Quick workaround: index the file with tabix.) [W::vcf_parse] Contig 'chr17' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED -tests/tabix_test.py::TestVCFFromVariantFile_10::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_10::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:676148 is not defined in the header, assuming Type=String -PASSED tests/tabix_test.py::TestVCFFromVariantFile_issue85::testConnecting [E::bcf_hdr_parse] Could not parse the header, sample line not found PASSED tests/tabix_test.py::TestVCFFromVariantFile_issue85::testParsing PASSED -tests/tabix_test.py::TestVCFFromVariantFile_16::testConnecting PASSED -tests/tabix_test.py::TestVCFFromVariantFile_16::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) -[W::vcf_parse_info] INFO 'sumGLbyD' is not defined in the header, assuming Type=String +tests/tabix_test.py::TestVCFFromVariantFile_24::testConnecting [E::bcf_hdr_parse_sample_line] Could not parse the "#CHROM.." line, either the fields are incorrect or spaces are present instead of tabs: + #CHROM POS ID REF ALT QUAL FILTER INFO + +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_24::testParsing PASSED +tests/tabix_test.py::TestVCFFromVariantFile_6::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_6::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_info] INFO 'CallSetAC' is not defined in the header, assuming Type=String +[W::vcf_parse_info] INFO 'CallSetAC2' is not defined in the header, assuming Type=String +[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:669442 is not defined in the header, assuming Type=String +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_vcf_v42::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_vcf_v42::testParsing PASSED +tests/tabix_test.py::TestVCFFromVariantFile_11::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_11::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:669442 is not defined in the header, assuming Type=String PASSED tests/tabix_test.py::TestVCFFromVariantFile_21::testConnecting [W::bcf_hdr_register_hrec] The definition of Flag "INFO/NotCalledInValidationSamples" is invalid, forcing Number=0 PASSED tests/tabix_test.py::TestVCFFromVariantFile_21::testParsing [W::bcf_hdr_register_hrec] The definition of Flag "INFO/NotCalledInValidationSamples" is invalid, forcing Number=0 [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) PASSED +tests/tabix_test.py::TestVCFFromVariantFile_4::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_4::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:249843 is not defined in the header, assuming Type=String +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_10::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_10::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +[W::vcf_parse_format_dict2] FORMAT 'GT' at 20:676148 is not defined in the header, assuming Type=String +PASSED +tests/tabix_test.py::TestVCFFromVariantFile_5::testConnecting PASSED +tests/tabix_test.py::TestVCFFromVariantFile_5::testParsing [W::vcf_parse] Contig '20' is not defined in the header. (Quick workaround: index the file with tabix.) +PASSED tests/tabix_test.py::TestIndexArgument::testFetchAll PASSED tests/tabix_test.py::TestIndexArgument::testLoadIndexWithoutTbiExtension PASSED tests/tabix_test.py::TestBackwardsCompatibility::testBED PASSED @@ -3043,7 +3079,7 @@ warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -================= 938 passed, 13 skipped, 2 warnings in 57.11s ================= +================= 938 passed, 13 skipped, 2 warnings in 34.32s ================= make[1]: Leaving directory '/build/reproducible-path/python-pysam-0.22.1+ds' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild @@ -3161,375 +3197,375 @@ creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12 creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/pysam_util.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/version.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/version.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/htslib_util.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/bcftools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/config.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/HMM.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bin.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcffilter.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tsv2vcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam_sample.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_iaux.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/filter.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/LICENSE -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ccall.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfplugin.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/version.sh -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hex.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfnorm.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfmerge.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfroh.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/convert.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcmp.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfplugin.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/str_finder.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/prob1.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/consensus.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cigar_state.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfannotate.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cols.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gff.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bcftools.pysam.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconcat.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconvert.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/extsort.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bcftools.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/version.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfcnv.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfbuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/LICENSE -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/filter.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam_sample.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tsv2vcf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ploidy.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/call.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/regidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/config.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/read_consensus.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/consensus.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_indel.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/variantkey.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/HMM.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gff.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bin.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/smpl_ilist.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfview.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/regidx.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bcftools.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/reheader.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/main.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfcall.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfbuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsom.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hclust.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/reheader.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfnorm.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfstats.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfcall.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cols.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/prob1.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/smpl_ilist.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfbuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconcat.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/convert.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfnorm.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcffilter.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcmp.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_indel.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/str_finder.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam_sample.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/khash_str2str.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mcall.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/HMM.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gvcf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/abuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/csq.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconvert.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsort.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/version.sh -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ccall.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfview.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcmp.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mpileup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconvert.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfcnv.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/extsort.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/rbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/abuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/convert.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/em.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bcftools.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tsv2vcf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gvcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/HMM.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/consensus.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kheap.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfindex.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/smpl_ilist.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gff.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dist.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/filter.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cols.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/extsort.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam_sample.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gvcf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfcall.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/convert.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/str_finder.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/prob1.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/version.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/utlist.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_iaux.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcffilter.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/abuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfmerge.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfplugin.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kmin.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/read_consensus.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfannotate.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/filter.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dist.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dist.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/regidx.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_iaux.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/main.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcmp.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ploidy.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsom.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfquery.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hclust.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_indel.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cols.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/extsort.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/em.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/abuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/variantkey.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dist.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kheap.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/regidx.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gvcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfgtcheck.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/main.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_iaux.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfhead.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfindex.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/abuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/filter.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gff.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ploidy.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfisec.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfcnv.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/utlist.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsort.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bcftools.pysam.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/prob1.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ploidy.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/consensus.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cigar_state.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/extsort.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/version.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/str_finder.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/version.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gff.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kmin.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfannotate.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/csq.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfhead.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/read_consensus.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/call.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam_sample.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcmp.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/reheader.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bin.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/HMM.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/rbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfroh.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mcall.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfisec.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/gvcf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bin.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfgtcheck.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfroh.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dist.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kmin.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/str_finder.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hex.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/cols.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/README -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfgtcheck.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hclust.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfroh.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/extsort.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfquery.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mw.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/read_consensus.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/read_consensus.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfhead.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf_indel.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam_sample.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfquery.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfgtcheck.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/prob1.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/smpl_ilist.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/reheader.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/regidx.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tabix.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfstats.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/abuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/main.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconvert.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfquery.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfmerge.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsom.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/convert.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tsv2vcf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcmp.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfannotate.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfbuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfindex.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfnorm.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mpileup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconcat.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bcftools.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kmin.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/dbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/filter.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfconcat.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kmin.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bin.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/smpl_ilist.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/config.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mpileup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bam2bcf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/bin.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfmerge.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/csq.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/mcall.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsort.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ccall.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcffilter.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfisec.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tabix.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/em.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hclust.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/HMM.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tsv2vcf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hclust.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/convert.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/ploidy.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/em.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsort.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/prob1.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfstats.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfplugin.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/README -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfsom.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/hclust.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfhead.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/kmin.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/tsv2vcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfstats.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/bcftools/vcfisec.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/bcftools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_markdup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_utils.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_import.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_split.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/LICENSE -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/version.sh -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdupse.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_ampliconclip.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_sort.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/dict.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/padding.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_samples.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/consensus_pileup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/config.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam2depth.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam2depth.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_markdup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sample.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_cat.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_md.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_utils.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdupse.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/tmp_file.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_consensus.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_sort.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_fastq.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/consensus_pileup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_lpileup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_color.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats_isize.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/LICENSE -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_lpileup.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cut_target.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cram_size.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/phase.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_consensus.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reset.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamtk.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamtk.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reset.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_samples.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_mate.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cut_target.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_ampliconclip.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_stat.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_mate.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/faidx.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/amplicon_stats.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/phase.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_flags.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_addrprg.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_lpileup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cram_size.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_mate.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedcov.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_fastq.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plbuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats_isize.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_aux.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamshuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools_config_vars.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/coverage.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_md.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_color.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_view.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_split.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_opts.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sample.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reference.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reference.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/amplicon_stats.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedidx.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedidx.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_markdup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_cat.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_view.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_utils.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats_isize.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_opts.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_index.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_samples.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/tmp_file.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_view.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/coverage.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plcmd.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_sort.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_addrprg.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamshuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/faidx.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_reheader.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_reheader.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_quickcheck.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_stat.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sample.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/coverage.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/tmp_file.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/padding.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/splaysort.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_ampliconclip.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools.pysam.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/version.sh -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/dict.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_aux.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_fastq.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_lpileup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/faidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedcov.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_cat.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_index.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_view.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/README -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_quickcheck.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_ampliconclip.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plbuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats_isize.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_color.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam2depth.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam2depth.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/splaysort.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_sort.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_import.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats_isize.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_ampliconclip.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_index.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_reheader.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_samples.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_opts.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_addrprg.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_mate.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/padding.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/consensus_pileup.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedidx.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamtk.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdupse.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/tmp_file.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plcmd.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_consensus.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_cat.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cram_size.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedcov.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_markdup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_quickcheck.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_lpileup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reset.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_consensus.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_fastq.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_reheader.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reference.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_import.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedcov.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sample.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_split.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sample.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bedidx.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sample.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_lpileup.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/faidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_flags.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_flags.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools.pysam.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_utils.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/phase.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/consensus_pileup.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/amplicon_stats.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/coverage.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_opts.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/consensus_pileup.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_stat.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/amplicon_stats.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats_isize.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools/lz4 +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/lz4/lz4.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools/lz4 copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/lz4/LICENSE -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools/lz4 copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/lz4/lz4.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools/lz4 copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/lz4/lz4.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools/lz4 -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/lz4/lz4.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools/lz4 -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/tmp_file.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/py.typed -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/dict.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_stat.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/phase.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/config.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_utils.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_quickcheck.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_color.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamshuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_index.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plbuf.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plbuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamtk.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/tmp_file.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_opts.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_md.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cut_target.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bamshuf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_plbuf.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/consensus_pileup.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/samtools_config_vars.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_import.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_split.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/padding.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_rmdupse.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/README -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/reference.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/stats.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/cram_size.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_aux.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/sam_utils.c.pysam.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/include/samtools/bam_ampliconclip.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/samtools +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/Pileup.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/samtools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/version.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/pysam_util.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/htslib_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/cbcftools_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__init__.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/cbcftools_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/utils.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/pysam_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/py.typed -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/csamtools_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/version.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/config.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/pysam_stream.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/samtools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/csamtools_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam creating /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/Pileup.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/utils.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/version.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/samtools.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/bcftools.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/samtools.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/config.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/__pycache__/utils.cpython-312.pyc -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__pycache__ -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/version.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcf.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/bcftools.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamtools.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/utils.py -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabix.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcutils.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libctabixproxies.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libchtslib.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcsamfile.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignedsegment.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcvcf.pyx -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam -byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__init__.py to __init__.cpython-312.pyc +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbcftools.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcalignmentfile.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/htslib_util.h -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcbgzf.pyi -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/htslib_util.c -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +copying /build/reproducible-path/python-pysam-0.22.1+ds/.pybuild/cpython3_3.12_pysam/build/pysam/libcfaidx.pxd -> /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam +byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/bcftools.py to bcftools.cpython-312.pyc +byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/config.py to config.cpython-312.pyc byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/include/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/Pileup.py to Pileup.cpython-312.pyc -byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/config.py to config.cpython-312.pyc byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/samtools.py to samtools.cpython-312.pyc byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/version.py to version.cpython-312.pyc -byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/bcftools.py to bcftools.cpython-312.pyc +byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam/utils.py to utils.cpython-312.pyc running install_egg_info Copying pysam.egg-info to /build/reproducible-path/python-pysam-0.22.1+ds/debian/python3-pysam/usr/lib/python3.12/dist-packages/pysam-0.22.1.egg-info @@ -3593,9 +3629,9 @@ dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild +dpkg-deb: building package 'python3-pysam' in '../python3-pysam_0.22.1+ds-2_amd64.deb'. dpkg-deb: building package 'python3-pysam-dbgsym' in '../python3-pysam-dbgsym_0.22.1+ds-2_amd64.deb'. dpkg-deb: building package 'python-pysam-tests' in '../python-pysam-tests_0.22.1+ds-2_all.deb'. -dpkg-deb: building package 'python3-pysam' in '../python3-pysam_0.22.1+ds-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../python-pysam_0.22.1+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../python-pysam_0.22.1+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -3603,12 +3639,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/40339/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/508743 and its subdirectories -I: Current time: Mon Aug 19 05:01:24 -12 2024 -I: pbuilder-time-stamp: 1724086884 +I: removing directory /srv/workspace/pbuilder/40339 and its subdirectories +I: Current time: Mon Sep 22 13:31:38 +14 2025 +I: pbuilder-time-stamp: 1758497498