Diff of the two buildlogs:

--
--- b1/build.log	2025-02-22 03:12:57.981616305 +0000
+++ b2/build.log	2025-02-22 03:48:54.168108669 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Thu Mar 26 21:30:46 -12 2026
-I: pbuilder-time-stamp: 1774603846
+I: Current time: Sat Feb 22 17:13:01 +14 2025
+I: pbuilder-time-stamp: 1740193981
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
 I: copying local configuration
@@ -32,52 +32,84 @@
 dpkg-source: info: applying test-tempdir
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/3321702/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos11-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Feb 22 03:13 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build/reproducible-path'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='amd64'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 '
-  DISTRIBUTION='unstable'
-  HOME='/root'
-  HOST_ARCH='amd64'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+  BASH_VERSION='5.2.37(1)-release'
+  BUILDDIR=/build/reproducible-path
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=amd64
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
+  DIRSTACK=()
+  DISTRIBUTION=unstable
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=x86_64
+  HOST_ARCH=amd64
   IFS=' 	
   '
-  INVOCATION_ID='c6f7d32f01fa49c78ed369edcec380b2'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='3321702'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=7dc5a94ee8f045b28ffcccef101e7974
+  LANG=C
+  LANGUAGE=et_EE:et
+  LC_ALL=C
+  MACHTYPE=x86_64-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=1448169
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.33QFcy8h/pbuilderrc_L83H --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.33QFcy8h/b1 --logfile b1/build.log python-pybedtools_0.10.0-4.dsc'
-  SUDO_GID='111'
-  SUDO_UID='106'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://213.165.73.152:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.33QFcy8h/pbuilderrc_5ORz --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.33QFcy8h/b2 --logfile b2/build.log python-pybedtools_0.10.0-4.dsc'
+  SUDO_GID=111
+  SUDO_UID=106
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://46.16.76.132:3128
 I: uname -a
-  Linux ionos15-amd64 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux
+  Linux i-capture-the-hostname 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
 I: ls -l /bin
-  lrwxrwxrwx 1 root root 7 Nov 22  2024 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/3321702/tmp/hooks/D02_print_environment finished
+  lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -397,7 +429,7 @@
 Get: 248 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB]
 Get: 249 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB]
 Get: 250 http://deb.debian.org/debian unstable/main amd64 r-base-core amd64 4.4.2-1 [28.3 MB]
-Fetched 191 MB in 11s (18.1 MB/s)
+Fetched 191 MB in 10s (19.1 MB/s)
 Preconfiguring packages ...
 Selecting previously unselected package libpython3.13-minimal:amd64.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19775 files and directories currently installed.)
@@ -1212,8 +1244,8 @@
 Setting up tzdata (2025a-2) ...
 
 Current default time zone: 'Etc/UTC'
-Local time is now:      Fri Mar 27 09:32:07 UTC 2026.
-Universal Time is now:  Fri Mar 27 09:32:07 UTC 2026.
+Local time is now:      Sat Feb 22 03:18:06 UTC 2025.
+Universal Time is now:  Sat Feb 22 03:18:06 UTC 2025.
 Run 'dpkg-reconfigure tzdata' if you wish to change it.
 
 Setting up unicode-data (15.1.0-1) ...
@@ -1445,7 +1477,11 @@
 Building tag database...
  -> Finished parsing the build-deps
 I: Building the package
-I: Running cd /build/reproducible-path/python-pybedtools-0.10.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../python-pybedtools_0.10.0-4_source.changes
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for unstable
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/python-pybedtools-0.10.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../python-pybedtools_0.10.0-4_source.changes
 dpkg-buildpackage: info: source package python-pybedtools
 dpkg-buildpackage: info: source version 0.10.0-4
 dpkg-buildpackage: info: source distribution unstable
@@ -1497,8 +1533,8 @@
         Please discontinue using this option, or if you still need it,
         file an issue with pypa/setuptools describing your use case.
 
-        This deprecation is overdue, please update your project and remove deprecated
-        calls to avoid build errors in the future.
+        By 2025-Aug-30, you need to update your project and remove deprecated calls
+        or your builds will no longer be supported.
         ********************************************************************************
 
 !!
@@ -1506,39 +1542,39 @@
 running build
 running build_py
 creating build/lib.linux-x86_64-cpython-312/pybedtools
+copying pybedtools/__init__.py -> build/lib.linux-x86_64-cpython-312/pybedtools
+copying pybedtools/stats.py -> build/lib.linux-x86_64-cpython-312/pybedtools
 copying pybedtools/genome_registry.py -> build/lib.linux-x86_64-cpython-312/pybedtools
+copying pybedtools/parallel.py -> build/lib.linux-x86_64-cpython-312/pybedtools
+copying pybedtools/filenames.py -> build/lib.linux-x86_64-cpython-312/pybedtools
+copying pybedtools/paths.py -> build/lib.linux-x86_64-cpython-312/pybedtools
 copying pybedtools/version.py -> build/lib.linux-x86_64-cpython-312/pybedtools
 copying pybedtools/logger.py -> build/lib.linux-x86_64-cpython-312/pybedtools
-copying pybedtools/filenames.py -> build/lib.linux-x86_64-cpython-312/pybedtools
-copying pybedtools/parallel.py -> build/lib.linux-x86_64-cpython-312/pybedtools
-copying pybedtools/__init__.py -> build/lib.linux-x86_64-cpython-312/pybedtools
-copying pybedtools/settings.py -> build/lib.linux-x86_64-cpython-312/pybedtools
 copying pybedtools/helpers.py -> build/lib.linux-x86_64-cpython-312/pybedtools
-copying pybedtools/stats.py -> build/lib.linux-x86_64-cpython-312/pybedtools
-copying pybedtools/paths.py -> build/lib.linux-x86_64-cpython-312/pybedtools
+copying pybedtools/settings.py -> build/lib.linux-x86_64-cpython-312/pybedtools
 copying pybedtools/bedtool.py -> build/lib.linux-x86_64-cpython-312/pybedtools
 creating build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/tfuncs.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/test_contrib.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/test_len_leak.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/test_cbedtools.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/test_iter.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/test_gzip_support.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/__init__.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/regression_tests.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/test_cbedtools.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/genomepy_integration.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/test_1.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/test_len_leak.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/test_contrib.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/regression_tests.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/test_gzip_support.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/tfuncs.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/test_pathlib.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/test_helpers.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
-copying pybedtools/test/genomepy_integration.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
+copying pybedtools/test/test_iter.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/test_issues.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 creating build/lib.linux-x86_64-cpython-312/pybedtools/contrib
-copying pybedtools/contrib/intersection_matrix.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
-copying pybedtools/contrib/bigbed.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
-copying pybedtools/contrib/long_range_interaction.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
 copying pybedtools/contrib/bigwig.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
+copying pybedtools/contrib/__init__.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
+copying pybedtools/contrib/long_range_interaction.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
 copying pybedtools/contrib/venn_maker.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
+copying pybedtools/contrib/bigbed.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
+copying pybedtools/contrib/intersection_matrix.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
 copying pybedtools/contrib/plotting.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
-copying pybedtools/contrib/__init__.py -> build/lib.linux-x86_64-cpython-312/pybedtools/contrib
 creating build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/__init__.py -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 running egg_info
@@ -1608,74 +1644,74 @@
 copying pybedtools/include/gzstream.cpp -> build/lib.linux-x86_64-cpython-312/pybedtools/include
 copying pybedtools/include/gzstream.h -> build/lib.linux-x86_64-cpython-312/pybedtools/include
 copying pybedtools/include/lineFileUtilities.h -> build/lib.linux-x86_64-cpython-312/pybedtools/include
-copying pybedtools/test/data/test_tsses.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.1.100.bam.bai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.1.100.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/b.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/d.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.sorted.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/vcf-stderr-test.vcf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/test.fa.fai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/hg38-base.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/hg38-problem.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/issue_121.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/test.fa -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/m1.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/bedpe.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/multibamcov_test.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/test.fa.fai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/snps.bed.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/hg19.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/example.narrowPeak -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.50.200.bam.bai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/vcf-stderr-test.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.50.200.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/vcf-stderr-test.vcf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/164.gtf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/venn.b.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/a.links.html -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/small.fastq -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.gff.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.50.200.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/gdc.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/mm9.bed12 -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/exons.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/issue319.out.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.1.100.bam.bai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.cram -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/test_bedpe.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/a.igv_script -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/issue319.out.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/a.links.html -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/small.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/venn.c.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.othersort.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/genome.fa -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/issue_121.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.cram -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/multibamcov_test.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/exons.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/1000genomes-example.vcf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/democonfig.yaml -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/y.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/small.fastq -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/small.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.sorted.bam.bai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/hg38-problem.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/c.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/venn.b.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/reads.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.sorted.bam.bai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/bedpe2.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/v.vcf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/x.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/1000genomes-example.vcf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/b.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/y.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/test_bedpe.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.gff.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.50.200.bam.bai -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/mm9.bed12 -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/snps.bed.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/hg19.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/test_peaks.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/gdc.sorted.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/expand_test.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/issue319.vcf.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/tag_test1.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/genome.fa -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/issue319.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/tag_test2.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/a.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/democonfig.yaml -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/d.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.1.100.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/m1.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/x.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/v.vcf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/tag_test1.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/vcf-stderr-test.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/test_tsses.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
-copying pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/164.gtf -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/bedpe2.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/a.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/bedpe.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/expand_test.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.othersort.bam -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/tag_test2.bed -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/gdc.gff -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
+copying pybedtools/test/data/example.narrowPeak -> build/lib.linux-x86_64-cpython-312/pybedtools/test/data
 copying pybedtools/test/gchart-expected.png -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/mpl-expected.png -> build/lib.linux-x86_64-cpython-312/pybedtools/test
 copying pybedtools/test/prevent_open_file_regression -> build/lib.linux-x86_64-cpython-312/pybedtools/test
@@ -1714,136 +1750,136 @@
 running install_lib
 creating build/bdist.linux-x86_64/wheel
 creating build/bdist.linux-x86_64/wheel/pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/cbedtools.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/stats.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-312/pybedtools/genome_registry.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/version.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/logger.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 creating build/bdist.linux-x86_64/wheel/pybedtools/include
-copying build/lib.linux-x86_64-cpython-312/pybedtools/include/bedFile.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-312/pybedtools/include/lineFileUtilities.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
 copying build/lib.linux-x86_64-cpython-312/pybedtools/include/gzstream.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
 copying build/lib.linux-x86_64-cpython-312/pybedtools/include/fileType.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-312/pybedtools/include/fileType.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-312/pybedtools/include/gzstream.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
 copying build/lib.linux-x86_64-cpython-312/pybedtools/include/bedFile.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-312/pybedtools/featurefuncs.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/include/gzstream.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-312/pybedtools/include/fileType.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-312/pybedtools/include/lineFileUtilities.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-312/pybedtools/include/bedFile.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-312/pybedtools/cbedtools.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/parallel.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/filenames.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/paths.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 creating build/bdist.linux-x86_64/wheel/pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/tfuncs.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_cbedtools.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/genomepy_integration.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_1.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_len_leak.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_contrib.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_shuffle215.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/regression_tests.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/mpl-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_gzip_support.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/gchart-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_shuffle227.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_cases.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/tfuncs.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_merge215.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_len_leak.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/gchart-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_merge227.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_cbedtools.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 creating build/bdist.linux-x86_64/wheel/pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test_tsses.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.1.100.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.1.100.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/d.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.sorted.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/vcf-stderr-test.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test.fa.fai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/hg38-base.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/hg38-problem.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/issue_121.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test.fa -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/m1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/multibamcov_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test.fa.fai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/snps.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/hg19.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/example.narrowPeak -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.50.200.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/vcf-stderr-test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.50.200.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/vcf-stderr-test.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/164.gtf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/venn.b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/a.links.html -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/small.fastq -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.50.200.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/mm9.bed12 -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/exons.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/issue319.out.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.1.100.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.cram -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test_bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/a.igv_script -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/issue319.out.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/a.links.html -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/small.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/venn.c.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.othersort.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/genome.fa -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/issue_121.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.cram -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/multibamcov_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/exons.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/1000genomes-example.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/democonfig.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/y.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/small.fastq -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/small.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.sorted.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/hg38-problem.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/c.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/venn.b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/reads.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.sorted.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/bedpe2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/v.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/x.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/1000genomes-example.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/y.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test_bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.50.200.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/mm9.bed12 -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/snps.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/hg19.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test_peaks.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.sorted.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/expand_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/issue319.vcf.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/tag_test1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/genome.fa -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/issue319.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/tag_test2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/a.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/democonfig.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/d.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.1.100.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/m1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/x.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/v.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/tag_test1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/vcf-stderr-test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/test_tsses.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_iter.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/prevent_open_file_regression -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/mpl-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_gzip_support.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_shuffle215.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/regression_tests.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_1.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/164.gtf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/bedpe2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/a.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/expand_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.othersort.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/tag_test2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/gdc.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/data/example.narrowPeak -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_pathlib.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_merge227.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_helpers.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_cases.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-312/pybedtools/test/genomepy_integration.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_iter.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-312/pybedtools/test/test_issues.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/test/prevent_open_file_regression -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-312/pybedtools/version.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/logger.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-312/pybedtools/cbedtools.pxd -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/featurefuncs.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/filenames.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/parallel.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/featurefuncs.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/helpers.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-312/pybedtools/cbedtools.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-312/pybedtools/settings.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/helpers.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/featurefuncs.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-312/pybedtools/bedtool.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-312/pybedtools/_Window.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/stats.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-312/pybedtools/paths.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 creating build/bdist.linux-x86_64/wheel/pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/intersection_matrix.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/bigbed.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/long_range_interaction.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
 copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/bigwig.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/long_range_interaction.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
 copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/venn_maker.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/bigbed.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/intersection_matrix.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
 copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/plotting.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-312/pybedtools/contrib/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-312/pybedtools/bedtool.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 running install_egg_info
 Copying pybedtools.egg-info to build/bdist.linux-x86_64/wheel/./pybedtools-0.10.0.egg-info
 running install_scripts
 creating build/bdist.linux-x86_64/wheel/pybedtools-0.10.0.dist-info/WHEEL
-creating '/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.12_pybedtools/.tmp-_dmdyclr/pybedtools-0.10.0-cp312-cp312-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
+creating '/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.12_pybedtools/.tmp-vf48udai/pybedtools-0.10.0-cp312-cp312-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
 adding 'pybedtools/_Window.pyx'
 adding 'pybedtools/__init__.py'
 adding 'pybedtools/bedtool.py'
@@ -1991,8 +2027,8 @@
         Please discontinue using this option, or if you still need it,
         file an issue with pypa/setuptools describing your use case.
 
-        This deprecation is overdue, please update your project and remove deprecated
-        calls to avoid build errors in the future.
+        By 2025-Aug-30, you need to update your project and remove deprecated calls
+        or your builds will no longer be supported.
         ********************************************************************************
 
 !!
@@ -2000,39 +2036,39 @@
 running build
 running build_py
 creating build/lib.linux-x86_64-cpython-313/pybedtools
+copying pybedtools/__init__.py -> build/lib.linux-x86_64-cpython-313/pybedtools
+copying pybedtools/stats.py -> build/lib.linux-x86_64-cpython-313/pybedtools
 copying pybedtools/genome_registry.py -> build/lib.linux-x86_64-cpython-313/pybedtools
+copying pybedtools/parallel.py -> build/lib.linux-x86_64-cpython-313/pybedtools
+copying pybedtools/filenames.py -> build/lib.linux-x86_64-cpython-313/pybedtools
+copying pybedtools/paths.py -> build/lib.linux-x86_64-cpython-313/pybedtools
 copying pybedtools/version.py -> build/lib.linux-x86_64-cpython-313/pybedtools
 copying pybedtools/logger.py -> build/lib.linux-x86_64-cpython-313/pybedtools
-copying pybedtools/filenames.py -> build/lib.linux-x86_64-cpython-313/pybedtools
-copying pybedtools/parallel.py -> build/lib.linux-x86_64-cpython-313/pybedtools
-copying pybedtools/__init__.py -> build/lib.linux-x86_64-cpython-313/pybedtools
-copying pybedtools/settings.py -> build/lib.linux-x86_64-cpython-313/pybedtools
 copying pybedtools/helpers.py -> build/lib.linux-x86_64-cpython-313/pybedtools
-copying pybedtools/stats.py -> build/lib.linux-x86_64-cpython-313/pybedtools
-copying pybedtools/paths.py -> build/lib.linux-x86_64-cpython-313/pybedtools
+copying pybedtools/settings.py -> build/lib.linux-x86_64-cpython-313/pybedtools
 copying pybedtools/bedtool.py -> build/lib.linux-x86_64-cpython-313/pybedtools
 creating build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/tfuncs.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/test_contrib.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/test_len_leak.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/test_cbedtools.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/test_iter.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/test_gzip_support.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/__init__.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/regression_tests.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/test_cbedtools.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/genomepy_integration.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/test_1.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/test_len_leak.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/test_contrib.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/regression_tests.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/test_gzip_support.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/tfuncs.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/test_pathlib.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/test_helpers.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
-copying pybedtools/test/genomepy_integration.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
+copying pybedtools/test/test_iter.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/test_issues.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 creating build/lib.linux-x86_64-cpython-313/pybedtools/contrib
-copying pybedtools/contrib/intersection_matrix.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
-copying pybedtools/contrib/bigbed.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
-copying pybedtools/contrib/long_range_interaction.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
 copying pybedtools/contrib/bigwig.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
+copying pybedtools/contrib/__init__.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
+copying pybedtools/contrib/long_range_interaction.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
 copying pybedtools/contrib/venn_maker.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
+copying pybedtools/contrib/bigbed.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
+copying pybedtools/contrib/intersection_matrix.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
 copying pybedtools/contrib/plotting.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
-copying pybedtools/contrib/__init__.py -> build/lib.linux-x86_64-cpython-313/pybedtools/contrib
 creating build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/__init__.py -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 running egg_info
@@ -2102,74 +2138,74 @@
 copying pybedtools/include/gzstream.cpp -> build/lib.linux-x86_64-cpython-313/pybedtools/include
 copying pybedtools/include/gzstream.h -> build/lib.linux-x86_64-cpython-313/pybedtools/include
 copying pybedtools/include/lineFileUtilities.h -> build/lib.linux-x86_64-cpython-313/pybedtools/include
-copying pybedtools/test/data/test_tsses.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.1.100.bam.bai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.1.100.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/b.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/d.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.sorted.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/vcf-stderr-test.vcf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/test.fa.fai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/hg38-base.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/hg38-problem.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/issue_121.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/test.fa -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/m1.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/bedpe.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/multibamcov_test.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/test.fa.fai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/snps.bed.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/hg19.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/example.narrowPeak -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.50.200.bam.bai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/vcf-stderr-test.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.50.200.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/vcf-stderr-test.vcf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/164.gtf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/venn.b.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/a.links.html -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/small.fastq -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.gff.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.50.200.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/gdc.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/mm9.bed12 -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/exons.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/issue319.out.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.1.100.bam.bai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.cram -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/test_bedpe.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/a.igv_script -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/issue319.out.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/a.links.html -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/small.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/venn.c.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.othersort.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/genome.fa -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/issue_121.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.cram -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/multibamcov_test.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/exons.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/1000genomes-example.vcf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/democonfig.yaml -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/y.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/small.fastq -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/small.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.sorted.bam.bai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/hg38-problem.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/c.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/venn.b.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/reads.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.sorted.bam.bai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/bedpe2.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/v.vcf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/x.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/1000genomes-example.vcf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/b.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/y.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/test_bedpe.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.gff.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.50.200.bam.bai -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/mm9.bed12 -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/snps.bed.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/hg19.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/test_peaks.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/gdc.sorted.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/expand_test.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/issue319.vcf.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/tag_test1.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/genome.fa -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/issue319.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/tag_test2.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/a.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/democonfig.yaml -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/d.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.1.100.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/m1.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/x.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/v.vcf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/tag_test1.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/vcf-stderr-test.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/test_tsses.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
-copying pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/164.gtf -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/bedpe2.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/a.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/bedpe.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/expand_test.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.othersort.bam -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/tag_test2.bed -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/gdc.gff -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
+copying pybedtools/test/data/example.narrowPeak -> build/lib.linux-x86_64-cpython-313/pybedtools/test/data
 copying pybedtools/test/gchart-expected.png -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/mpl-expected.png -> build/lib.linux-x86_64-cpython-313/pybedtools/test
 copying pybedtools/test/prevent_open_file_regression -> build/lib.linux-x86_64-cpython-313/pybedtools/test
@@ -2198,138 +2234,138 @@
 running install_lib
 creating build/bdist.linux-x86_64/wheel
 creating build/bdist.linux-x86_64/wheel/pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/stats.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-313/pybedtools/genome_registry.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/version.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/logger.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/featurefuncs.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/featurefuncs.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/cbedtools.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools
 creating build/bdist.linux-x86_64/wheel/pybedtools/include
-copying build/lib.linux-x86_64-cpython-313/pybedtools/include/bedFile.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-313/pybedtools/include/lineFileUtilities.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
 copying build/lib.linux-x86_64-cpython-313/pybedtools/include/gzstream.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
 copying build/lib.linux-x86_64-cpython-313/pybedtools/include/fileType.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-313/pybedtools/include/fileType.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-313/pybedtools/include/gzstream.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
 copying build/lib.linux-x86_64-cpython-313/pybedtools/include/bedFile.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
-copying build/lib.linux-x86_64-cpython-313/pybedtools/featurefuncs.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/cbedtools.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/include/gzstream.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-313/pybedtools/include/fileType.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-313/pybedtools/include/lineFileUtilities.h -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-313/pybedtools/include/bedFile.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools/include
+copying build/lib.linux-x86_64-cpython-313/pybedtools/featurefuncs.cpp -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/parallel.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/filenames.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/paths.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 creating build/bdist.linux-x86_64/wheel/pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/tfuncs.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_cbedtools.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/genomepy_integration.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_1.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_len_leak.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_contrib.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_shuffle215.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/regression_tests.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/mpl-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_gzip_support.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/gchart-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_shuffle227.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_cases.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/tfuncs.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_merge215.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_len_leak.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/gchart-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_merge227.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_cbedtools.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 creating build/bdist.linux-x86_64/wheel/pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test_tsses.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.1.100.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.1.100.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/d.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.sorted.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/vcf-stderr-test.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test.fa.fai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/hg38-base.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/hg38-problem.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/issue_121.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test.fa -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/m1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/multibamcov_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test.fa.fai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/snps.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/hg19.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/example.narrowPeak -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.50.200.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/vcf-stderr-test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.50.200.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/vcf-stderr-test.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/164.gtf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/venn.b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/a.links.html -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/small.fastq -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.50.200.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/mm9.bed12 -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/exons.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/issue319.out.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.1.100.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.cram -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test_bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/a.igv_script -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/issue319.out.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/a.links.html -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/small.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/venn.c.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.othersort.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/genome.fa -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/issue_121.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.cram -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/multibamcov_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/exons.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/1000genomes-example.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/democonfig.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/y.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/small.fastq -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/small.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.sorted.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/hg38-problem.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/c.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/venn.b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/reads.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.sorted.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/bedpe2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/v.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/x.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/1000genomes-example.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/b.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/y.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test_bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.50.200.bam.bai -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/mm9.bed12 -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/snps.bed.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/hg19.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test_peaks.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.sorted.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/expand_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/issue319.vcf.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/tag_test1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/genome.fa -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/issue319.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/tag_test2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/a.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/democonfig.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/d.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.1.100.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/m1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/x.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/v.vcf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/tag_test1.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/vcf-stderr-test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/test_tsses.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_iter.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/prevent_open_file_regression -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/mpl-expected.png -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_gzip_support.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_shuffle215.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/regression_tests.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_1.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/164.gtf -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/bedpe2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/a.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/bedpe.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/expand_test.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.othersort.bam -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/tag_test2.bed -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/gdc.gff -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/data/example.narrowPeak -> build/bdist.linux-x86_64/wheel/./pybedtools/test/data
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_pathlib.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_merge227.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_helpers.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_cases.yaml -> build/bdist.linux-x86_64/wheel/./pybedtools/test
-copying build/lib.linux-x86_64-cpython-313/pybedtools/test/genomepy_integration.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_iter.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
 copying build/lib.linux-x86_64-cpython-313/pybedtools/test/test_issues.py -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/test/prevent_open_file_regression -> build/bdist.linux-x86_64/wheel/./pybedtools/test
+copying build/lib.linux-x86_64-cpython-313/pybedtools/featurefuncs.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/version.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/logger.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/cbedtools.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-313/pybedtools/cbedtools.pxd -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/filenames.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/parallel.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/featurefuncs.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/helpers.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-313/pybedtools/cbedtools.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/cbedtools.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-313/pybedtools/settings.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/helpers.py -> build/bdist.linux-x86_64/wheel/./pybedtools
+copying build/lib.linux-x86_64-cpython-313/pybedtools/bedtool.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 copying build/lib.linux-x86_64-cpython-313/pybedtools/_Window.pyx -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/stats.py -> build/bdist.linux-x86_64/wheel/./pybedtools
-copying build/lib.linux-x86_64-cpython-313/pybedtools/paths.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 creating build/bdist.linux-x86_64/wheel/pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/intersection_matrix.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/bigbed.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/long_range_interaction.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
 copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/bigwig.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/long_range_interaction.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
 copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/venn_maker.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/bigbed.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
+copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/intersection_matrix.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
 copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/plotting.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-313/pybedtools/contrib/__init__.py -> build/bdist.linux-x86_64/wheel/./pybedtools/contrib
-copying build/lib.linux-x86_64-cpython-313/pybedtools/bedtool.py -> build/bdist.linux-x86_64/wheel/./pybedtools
 running install_egg_info
 Copying pybedtools.egg-info to build/bdist.linux-x86_64/wheel/./pybedtools-0.10.0.egg-info
 running install_scripts
 creating build/bdist.linux-x86_64/wheel/pybedtools-0.10.0.dist-info/WHEEL
-creating '/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.13_pybedtools/.tmp-7a6uqj_7/pybedtools-0.10.0-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
+creating '/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.13_pybedtools/.tmp-iwshhzyp/pybedtools-0.10.0-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
 adding 'pybedtools/_Window.pyx'
 adding 'pybedtools/__init__.py'
 adding 'pybedtools/bedtool.py'
@@ -2469,7 +2505,7 @@
 making output directory... done
 Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`.
 [autosummary] generating autosummary for: 3-brief-examples.rst, FAQs.rst, autodoc_source.rst, changes.rst, create-a-bedtool-tutorial.rst, default-arguments.rst, each.rst, filtering.rst, flow-of-commands.rst, history.rst, ..., topical-create-a-bedtool.rst, topical-design-principles.rst, topical-documentation-contents.rst, topical-genome.rst, topical-iterators.rst, topical-low-level-ops.rst, topical-random.rst, topical-saving.rst, topical-wrapping.rst, tutorial-contents.rst
-Matplotlib created a temporary cache directory at /tmp/matplotlib-cpge_bzw because the default path (/nonexistent/first-build/.cache/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
+Matplotlib created a temporary cache directory at /tmp/matplotlib-h3uj9geu because the default path (/nonexistent/second-build/.cache/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
 [autosummary] generating autosummary for: /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.absolute_distance.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.all_hits.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.annotate.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.any_hits.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.as_intervalfile.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.at.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.bam_to_bed.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.bam_to_fastq.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.bed6.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.bedtool.BedTool.bedpe_to_bam.rst, ..., /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.helpers.set_tempdir.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/autodocs/pybedtools.parallel.parallel_apply.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.add_color.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.bedgraph_scale.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.extend_fields.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.five_prime.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.greater_than.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.less_than.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.normalized_to_length.rst, /build/reproducible-path/python-pybedtools-0.10.0/docs/source/pybedtools.featurefuncs.three_prime.rst
 building [mo]: targets for 0 po files that are out of date
 writing output... 
@@ -2777,9 +2813,9 @@
 preparing documents... done
 copying assets... 
 copying static files... 
-Writing evaluated template result to /build/reproducible-path/python-pybedtools-0.10.0/docs/html/_static/documentation_options.js
 Writing evaluated template result to /build/reproducible-path/python-pybedtools-0.10.0/docs/html/_static/language_data.js
 Writing evaluated template result to /build/reproducible-path/python-pybedtools-0.10.0/docs/html/_static/basic.css
+Writing evaluated template result to /build/reproducible-path/python-pybedtools-0.10.0/docs/html/_static/documentation_options.js
 Writing evaluated template result to /build/reproducible-path/python-pybedtools-0.10.0/docs/html/_static/alabaster.css
 copying static files: done
 copying extra files... 
@@ -2998,7 +3034,7 @@
 ....................................................................     [ 99%]
 pybedtools/test/test_pathlib.py ...                                      [100%]
 
-================ 506 passed, 2 deselected, 3 xfailed in 25.53s =================
+=========== 506 passed, 2 deselected, 3 xfailed in 147.39s (0:02:27) ===========
 I: pybuild pybuild:334: cd /build/reproducible-path/python-pybedtools-0.10.0/docs ; PYTHONPATH=/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.12_pybedtools/build python3.12 -m sphinx -b doctest -d build/doctrees   source build/doctest
 Running Sphinx v8.1.3
 loading translations [en]... done
@@ -3779,7 +3815,7 @@
 ....................................................................     [ 99%]
 pybedtools/test/test_pathlib.py ...                                      [100%]
 
-================ 506 passed, 2 deselected, 3 xfailed in 13.13s =================
+=========== 506 passed, 2 deselected, 3 xfailed in 131.80s (0:02:11) ===========
 I: pybuild pybuild:334: cd /build/reproducible-path/python-pybedtools-0.10.0/docs ; PYTHONPATH=/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.13_pybedtools/build python3.13 -m sphinx -b doctest -d build/doctrees   source build/doctest
 Running Sphinx v8.1.3
 loading translations [en]... done
@@ -4274,9 +4310,9 @@
 dpkg-gencontrol: warning: Depends field of package pybedtools-bin: substitution variable ${python3:Depends} used, but is not defined
    dh_md5sums -O--buildsystem=pybuild
    dh_builddeb -O--buildsystem=pybuild
+dpkg-deb: building package 'python3-pybedtools' in '../python3-pybedtools_0.10.0-4_amd64.deb'.
 dpkg-deb: building package 'pybedtools-bin' in '../pybedtools-bin_0.10.0-4_all.deb'.
 dpkg-deb: building package 'python3-pybedtools-dbgsym' in '../python3-pybedtools-dbgsym_0.10.0-4_amd64.deb'.
-dpkg-deb: building package 'python3-pybedtools' in '../python3-pybedtools_0.10.0-4_amd64.deb'.
 dpkg-deb: building package 'python-pybedtools-doc' in '../python-pybedtools-doc_0.10.0-4_all.deb'.
  dpkg-genbuildinfo --build=binary -O../python-pybedtools_0.10.0-4_amd64.buildinfo
  dpkg-genchanges --build=binary -O../python-pybedtools_0.10.0-4_amd64.changes
@@ -4286,12 +4322,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: not including original source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/1448169/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/3321702 and its subdirectories
-I: Current time: Thu Mar 26 21:35:57 -12 2026
-I: pbuilder-time-stamp: 1774604157
+I: removing directory /srv/workspace/pbuilder/1448169 and its subdirectories
+I: Current time: Sat Feb 22 17:48:53 +14 2025
+I: pbuilder-time-stamp: 1740196133