Diff of the two buildlogs:
--
--- b1/build.log 2025-03-03 20:06:12.505742265 +0000
+++ b2/build.log 2025-03-03 20:09:41.464296760 +0000
@@ -1,6 +1,6 @@
I: pbuilder: network access will be disabled during build
-I: Current time: Mon Mar 3 08:00:47 -12 2025
-I: pbuilder-time-stamp: 1741032047
+I: Current time: Mon Apr 6 16:29:15 +14 2026
+I: pbuilder-time-stamp: 1775442555
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
@@ -24,51 +24,83 @@
dpkg-source: info: applying jar-mainClass-and-deps.patch
I: using fakeroot in build.
I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/986535/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/D01_modify_environment starting
+debug: Running on infom02-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Apr 6 02:29 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/D02_print_environment starting
I: set
- BUILDDIR='/build/reproducible-path'
- BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
- BUILDUSERNAME='pbuilder1'
- BUILD_ARCH='amd64'
- DEBIAN_FRONTEND='noninteractive'
+ BASH=/bin/sh
+ BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+ BASH_ALIASES=()
+ BASH_ARGC=()
+ BASH_ARGV=()
+ BASH_CMDS=()
+ BASH_LINENO=([0]="12" [1]="0")
+ BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+ BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+ BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+ BASH_VERSION='5.2.37(1)-release'
+ BUILDDIR=/build/reproducible-path
+ BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+ BUILDUSERNAME=pbuilder2
+ BUILD_ARCH=amd64
+ DEBIAN_FRONTEND=noninteractive
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
- DISTRIBUTION='unstable'
- HOME='/root'
- HOST_ARCH='amd64'
+ DIRSTACK=()
+ DISTRIBUTION=unstable
+ EUID=0
+ FUNCNAME=([0]="Echo" [1]="main")
+ GROUPS=()
+ HOME=/root
+ HOSTNAME=i-capture-the-hostname
+ HOSTTYPE=x86_64
+ HOST_ARCH=amd64
IFS='
'
- INVOCATION_ID='9f49970c51a64f6faa4f208f9bf4f950'
- LANG='C'
- LANGUAGE='en_US:en'
- LC_ALL='C'
- MAIL='/var/mail/root'
- OPTIND='1'
- PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
- PBCURRENTCOMMANDLINEOPERATION='build'
- PBUILDER_OPERATION='build'
- PBUILDER_PKGDATADIR='/usr/share/pbuilder'
- PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
- PBUILDER_SYSCONFDIR='/etc'
- PPID='986535'
- PS1='# '
- PS2='> '
+ INVOCATION_ID=ac2652a8fde446c8b8b4d3494b414c50
+ LANG=C
+ LANGUAGE=et_EE:et
+ LC_ALL=C
+ MACHTYPE=x86_64-pc-linux-gnu
+ MAIL=/var/mail/root
+ OPTERR=1
+ OPTIND=1
+ OSTYPE=linux-gnu
+ PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+ PBCURRENTCOMMANDLINEOPERATION=build
+ PBUILDER_OPERATION=build
+ PBUILDER_PKGDATADIR=/usr/share/pbuilder
+ PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+ PBUILDER_SYSCONFDIR=/etc
+ PIPESTATUS=([0]="0")
+ POSIXLY_CORRECT=y
+ PPID=1396486
PS4='+ '
- PWD='/'
- SHELL='/bin/bash'
- SHLVL='2'
- SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JxciRkLC/pbuilderrc_51Rl --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JxciRkLC/b1 --logfile b1/build.log opsin_2.8.0-3.dsc'
- SUDO_GID='109'
- SUDO_UID='104'
- SUDO_USER='jenkins'
- TERM='unknown'
- TZ='/usr/share/zoneinfo/Etc/GMT+12'
- USER='root'
- _='/usr/bin/systemd-run'
+ PWD=/
+ SHELL=/bin/bash
+ SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+ SHLVL=3
+ SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JxciRkLC/pbuilderrc_04y3 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JxciRkLC/b2 --logfile b2/build.log opsin_2.8.0-3.dsc'
+ SUDO_GID=109
+ SUDO_UID=104
+ SUDO_USER=jenkins
+ TERM=unknown
+ TZ=/usr/share/zoneinfo/Etc/GMT-14
+ UID=0
+ USER=root
+ _='I: set'
I: uname -a
- Linux infom01-amd64 6.1.0-31-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
+ Linux i-capture-the-hostname 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux
I: ls -l /bin
- lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/986535/tmp/hooks/D02_print_environment finished
+ lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
@@ -443,7 +475,7 @@
Get: 309 http://deb.debian.org/debian unstable/main amd64 maven-repo-helper all 1.11 [142 kB]
Get: 310 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB]
Get: 311 http://deb.debian.org/debian unstable/main amd64 maven-debian-helper all 2.6.7 [108 kB]
-Fetched 277 MB in 16s (16.8 MB/s)
+Fetched 277 MB in 4s (71.2 MB/s)
Preconfiguring packages ...
Selecting previously unselected package libsystemd-shared:amd64.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19778 files and directories currently installed.)
@@ -1925,7 +1957,11 @@
fakeroot is already the newest version (1.37-1).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
-I: Running cd /build/reproducible-path/opsin-2.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../opsin_2.8.0-3_source.changes
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for unstable
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/opsin-2.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../opsin_2.8.0-3_source.changes
dpkg-buildpackage: info: source package opsin
dpkg-buildpackage: info: source version 2.8.0-3
dpkg-buildpackage: info: source distribution unstable
@@ -2148,14 +2184,14 @@
[INFO] Reactor Summary for OPSIN 2.8.0:
[INFO]
[INFO] OPSIN .............................................. SUCCESS [ 0.002 s]
-[INFO] OPSIN Core ......................................... SUCCESS [ 8.911 s]
-[INFO] OPSIN InChI Support ................................ SUCCESS [ 1.008 s]
-[INFO] OPSIN Command Line interface ....................... SUCCESS [ 1.364 s]
+[INFO] OPSIN Core ......................................... SUCCESS [ 5.956 s]
+[INFO] OPSIN InChI Support ................................ SUCCESS [ 0.849 s]
+[INFO] OPSIN Command Line interface ....................... SUCCESS [ 1.206 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
-[INFO] Total time: 11.443 s
-[INFO] Finished at: 2025-03-03T20:04:43Z
+[INFO] Total time: 8.122 s
+[INFO] Finished at: 2026-04-06T02:31:23Z
[INFO] ------------------------------------------------------------------------
dh_auto_test
/usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/opsin-2.8.0 -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/opsin-2.8.0/debian -Dmaven.repo.local=/build/reproducible-path/opsin-2.8.0/debian/maven-repo --batch-mode test
@@ -2198,56 +2234,18 @@
[INFO] -------------------------------------------------------
[INFO] T E S T S
[INFO] -------------------------------------------------------
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.PolymerTest
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.953 s - in uk.ac.cam.ch.wwmm.opsin.PolymerTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.AtomTest
-[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.636 s - in uk.ac.cam.ch.wwmm.opsin.AtomTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_ProcesslocantsTest
-[INFO] Tests run: 29, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.069 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_ProcesslocantsTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererTest
-[WARNING] Tests run: 83, Failures: 0, Errors: 0, Skipped: 2, Time elapsed: 0.26 s - in uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.SSSRTest
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.SSSRTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_AmbiguitiesAndIrregularitiesTest
-[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_AmbiguitiesAndIrregularitiesTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.NameToStructureTest
-[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.NameToStructureTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.HeteroAtomReplacementTest
+[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.021 s - in uk.ac.cam.ch.wwmm.opsin.HeteroAtomReplacementTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.ParserTest
-[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.066 s - in uk.ac.cam.ch.wwmm.opsin.ParserTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.CycleDetectorTest
-[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.CycleDetectorTest
+[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.226 s - in uk.ac.cam.ch.wwmm.opsin.ParserTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentProcessorTest
+[INFO] Tests run: 16, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.089 s - in uk.ac.cam.ch.wwmm.opsin.ComponentProcessorTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.AtomTest
+[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.043 s - in uk.ac.cam.ch.wwmm.opsin.AtomTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_MiscTest
-[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_MiscTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.StereochemistryTest
-[INFO] Tests run: 60, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.398 s - in uk.ac.cam.ch.wwmm.opsin.StereochemistryTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.StructureBuildingMethodsTest
-[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.037 s - in uk.ac.cam.ch.wwmm.opsin.StructureBuildingMethodsTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_StereochemistryTest
-[INFO] Tests run: 48, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.018 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_StereochemistryTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.WordToolsTest
-[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.opsin.WordToolsTest
+[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_MiscTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.CASToolsTest
-[INFO] Tests run: 29, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.103 s - in uk.ac.cam.ch.wwmm.opsin.CASToolsTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.RadixTrieTest
-[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.RadixTrieTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererFunctionsTest
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererFunctionsTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentProcessorTest
-[INFO] Tests run: 16, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.015 s - in uk.ac.cam.ch.wwmm.opsin.ComponentProcessorTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.HeteroAtomReplacementTest
-[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.HeteroAtomReplacementTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.VerifyFragmentsTest
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.121 s - in uk.ac.cam.ch.wwmm.opsin.VerifyFragmentsTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.PreProcessorTest
-[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.007 s - in uk.ac.cam.ch.wwmm.opsin.PreProcessorTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.UninterpretableNameTest
-[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.142 s - in uk.ac.cam.ch.wwmm.opsin.UninterpretableNameTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.SMILESWriterTest
-[INFO] Tests run: 51, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.03 s - in uk.ac.cam.ch.wwmm.opsin.SMILESWriterTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.NameToStructureConfigurationsTest
-[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.opsin.NameToStructureConfigurationsTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.TokenizerTest
-[INFO] Tests run: 29, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.151 s - in uk.ac.cam.ch.wwmm.opsin.TokenizerTest
+[INFO] Tests run: 29, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.093 s - in uk.ac.cam.ch.wwmm.opsin.CASToolsTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.DtdTest
Validating:file:/build/reproducible-path/opsin-2.8.0/opsin-core/target/classes/uk/ac/cam/ch/wwmm/opsin/resources/regexTokens.xml
Validating:file:/build/reproducible-path/opsin-2.8.0/opsin-core/target/classes/uk/ac/cam/ch/wwmm/opsin/resources/arylSubstituents.xml
@@ -2287,17 +2285,55 @@
Validating:file:/build/reproducible-path/opsin-2.8.0/opsin-core/target/classes/uk/ac/cam/ch/wwmm/opsin/resources/suffixRules.xml
Validating:file:/build/reproducible-path/opsin-2.8.0/opsin-core/target/classes/uk/ac/cam/ch/wwmm/opsin/resources/wordRules.xml
Validating:file:/build/reproducible-path/opsin-2.8.0/opsin-core/target/classes/uk/ac/cam/ch/wwmm/opsin/resources/suffixApplicability.xml
-[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.354 s - in uk.ac.cam.ch.wwmm.opsin.DtdTest
+[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.253 s - in uk.ac.cam.ch.wwmm.opsin.DtdTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.FragmentTest
-[INFO] Tests run: 34, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.015 s - in uk.ac.cam.ch.wwmm.opsin.FragmentTest
+[INFO] Tests run: 34, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.024 s - in uk.ac.cam.ch.wwmm.opsin.FragmentTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.FragmentManagerTest
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.opsin.FragmentManagerTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.NameToStructureConfigurationsTest
+[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.071 s - in uk.ac.cam.ch.wwmm.opsin.NameToStructureConfigurationsTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.StructureBuildingMethodsTest
+[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.opsin.StructureBuildingMethodsTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.SMILESWriterTest
+[INFO] Tests run: 51, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.036 s - in uk.ac.cam.ch.wwmm.opsin.SMILESWriterTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.NameToStructureTest
+[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in uk.ac.cam.ch.wwmm.opsin.NameToStructureTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.PreProcessorTest
+[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.opsin.PreProcessorTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.RadixTrieTest
+[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.RadixTrieTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.WordToolsTest
+[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.opsin.WordToolsTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.AmbiguityDetectionTest
+[INFO] Tests run: 104, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.22 s - in uk.ac.cam.ch.wwmm.opsin.AmbiguityDetectionTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererTest
+[WARNING] Tests run: 83, Failures: 0, Errors: 0, Skipped: 2, Time elapsed: 0.151 s - in uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.PolymerTest
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.PolymerTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_AmbiguitiesAndIrregularitiesTest
+[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_AmbiguitiesAndIrregularitiesTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.StereochemistryTest
+[INFO] Tests run: 60, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.095 s - in uk.ac.cam.ch.wwmm.opsin.StereochemistryTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererFunctionsTest
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.FusedRingNumbererFunctionsTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.TokenizerTest
+[INFO] Tests run: 29, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.103 s - in uk.ac.cam.ch.wwmm.opsin.TokenizerTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_ProcesslocantsTest
+[INFO] Tests run: 29, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_ProcesslocantsTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.UninterpretableNameTest
+[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.014 s - in uk.ac.cam.ch.wwmm.opsin.UninterpretableNameTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.SSSRTest
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.SSSRTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.VerifyFragmentsTest
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.106 s - in uk.ac.cam.ch.wwmm.opsin.VerifyFragmentsTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.CycleDetectorTest
+[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.CycleDetectorTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_StereochemistryTest
+[INFO] Tests run: 48, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.018 s - in uk.ac.cam.ch.wwmm.opsin.ComponentGeneration_StereochemistryTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.BondTest
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.BondTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.SMILESFragmentBuilderTest
-[INFO] Tests run: 86, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.048 s - in uk.ac.cam.ch.wwmm.opsin.SMILESFragmentBuilderTest
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.AmbiguityDetectionTest
-[INFO] Tests run: 104, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.192 s - in uk.ac.cam.ch.wwmm.opsin.AmbiguityDetectionTest
+[INFO] Tests run: 86, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.037 s - in uk.ac.cam.ch.wwmm.opsin.SMILESFragmentBuilderTest
[INFO]
[INFO] Results:
[INFO]
@@ -2326,10 +2362,10 @@
[INFO] -------------------------------------------------------
[INFO] T E S T S
[INFO] -------------------------------------------------------
-[INFO] Running uk.ac.cam.ch.wwmm.opsin.InchiOutputTest
-[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.272 s - in uk.ac.cam.ch.wwmm.opsin.InchiOutputTest
[INFO] Running uk.ac.cam.ch.wwmm.opsin.NomenclatureIntegrationTest
-[INFO] Tests run: 1029, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.98 s - in uk.ac.cam.ch.wwmm.opsin.NomenclatureIntegrationTest
+[INFO] Tests run: 1029, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.955 s - in uk.ac.cam.ch.wwmm.opsin.NomenclatureIntegrationTest
+[INFO] Running uk.ac.cam.ch.wwmm.opsin.InchiOutputTest
+[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.opsin.InchiOutputTest
[INFO]
[INFO] Results:
[INFO]
@@ -2359,14 +2395,14 @@
[INFO] Reactor Summary for OPSIN 2.8.0:
[INFO]
[INFO] OPSIN .............................................. SUCCESS [ 0.002 s]
-[INFO] OPSIN Core ......................................... SUCCESS [ 36.963 s]
-[INFO] OPSIN InChI Support ................................ SUCCESS [ 35.957 s]
-[INFO] OPSIN Command Line interface ....................... SUCCESS [ 0.050 s]
+[INFO] OPSIN Core ......................................... SUCCESS [ 34.525 s]
+[INFO] OPSIN InChI Support ................................ SUCCESS [ 33.885 s]
+[INFO] OPSIN Command Line interface ....................... SUCCESS [ 0.032 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
-[INFO] Total time: 01:13 min
-[INFO] Finished at: 2025-03-03T20:05:59Z
+[INFO] Total time: 01:08 min
+[INFO] Finished at: 2026-04-06T02:32:33Z
[INFO] ------------------------------------------------------------------------
create-stamp debian/debhelper-build-stamp
dh_prep
@@ -2438,15 +2474,15 @@
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary for OPSIN 2.8.0:
[INFO]
-[INFO] OPSIN .............................................. SUCCESS [ 0.493 s]
-[INFO] OPSIN Core ......................................... SUCCESS [ 0.198 s]
-[INFO] OPSIN InChI Support ................................ SUCCESS [ 0.144 s]
-[INFO] OPSIN Command Line interface ....................... SUCCESS [ 0.144 s]
+[INFO] OPSIN .............................................. SUCCESS [ 0.312 s]
+[INFO] OPSIN Core ......................................... SUCCESS [ 0.037 s]
+[INFO] OPSIN InChI Support ................................ SUCCESS [ 0.024 s]
+[INFO] OPSIN Command Line interface ....................... SUCCESS [ 0.024 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
-[INFO] Total time: 1.211 s
-[INFO] Finished at: 2025-03-03T20:06:02Z
+[INFO] Total time: 0.538 s
+[INFO] Finished at: 2026-04-06T02:32:34Z
[INFO] ------------------------------------------------------------------------
mh_resolve_dependencies --non-interactive --offline --build -plibopsin-java --base-directory=/build/reproducible-path/opsin-2.8.0 --non-explore
Analysing pom.xml...
@@ -2483,12 +2519,14 @@
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/1396486/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
-I: removing directory /srv/workspace/pbuilder/986535 and its subdirectories
-I: Current time: Mon Mar 3 08:06:11 -12 2025
-I: pbuilder-time-stamp: 1741032371
+I: removing directory /srv/workspace/pbuilder/1396486 and its subdirectories
+I: Current time: Mon Apr 6 16:32:40 +14 2026
+I: pbuilder-time-stamp: 1775442760