Diff of the two buildlogs: -- --- b1/build.log 2024-11-22 09:53:36.744776834 +0000 +++ b2/build.log 2024-11-22 09:56:17.557504908 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 25 04:13:50 -12 2025 -I: pbuilder-time-stamp: 1766679230 +I: Current time: Fri Nov 22 23:53:39 +14 2024 +I: pbuilder-time-stamp: 1732269219 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -27,51 +27,83 @@ dpkg-source: info: applying debian-libs.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/302232/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 22 09:53 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='0d878587b9a64612b49a7cd7e3ae8704' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='302232' - PS1='# ' - PS2='> ' + INVOCATION_ID=8fa2c6573bc14c6b833bdee87646d036 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=804960 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JSsmyqys/pbuilderrc_5Xfy --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JSsmyqys/b1 --logfile b1/build.log metaeuk_7-bba0d80+ds-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JSsmyqys/pbuilderrc_gfkL --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JSsmyqys/b2 --logfile b2/build.log metaeuk_7-bba0d80+ds-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/302232/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -186,7 +218,7 @@ Get: 59 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-1 [465 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libxxhash-dev amd64 0.8.2-2+b2 [79.4 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] -Fetched 38.7 MB in 1s (64.6 MB/s) +Fetched 38.7 MB in 1s (41.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) @@ -445,7 +477,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/metaeuk-7-bba0d80+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../metaeuk_7-bba0d80+ds-1_source.changes +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/metaeuk-7-bba0d80+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../metaeuk_7-bba0d80+ds-1_source.changes dpkg-buildpackage: info: source package metaeuk dpkg-buildpackage: info: source version 7-bba0d80+ds-1 dpkg-buildpackage: info: source distribution unstable @@ -535,8 +571,8 @@ -- Found OpenMP -- xxd not found, using xxdi.pl instead -- ShellCheck not found --- Configuring done (4.3s) --- Generating done (0.4s) +-- Configuring done (2.9s) +-- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -567,9 +603,9 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/DependInfo.cmake "--color=" make -f lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/build.make lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/depend make -f data/CMakeFiles/local-generated.dir/build.make data/CMakeFiles/local-generated.dir/depend -make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/depend make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/DependInfo.cmake "--color=" +make -f src/version/CMakeFiles/version.dir/build.make src/version/CMakeFiles/version.dir/depend make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/ksw2 /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' @@ -579,113 +615,94 @@ make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/data /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/data /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/data/CMakeFiles/local-generated.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/data /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/data/CMakeFiles/generated.dir/DependInfo.cmake "--color=" -make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/src/version /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version/CMakeFiles/version.dir/DependInfo.cmake "--color=" +make[3]: Entering directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metaeuk-7-bba0d80+ds /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/data /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/data/CMakeFiles/generated.dir/DependInfo.cmake "--color=" 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -MD -MT lib/mmseqs/lib/ksw2/CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -MF CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o.d -o CMakeFiles/ksw2.dir/ksw2_extz2_sse.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2/ksw2_extz2_sse.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true predictexons.sh -[ 2%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o +[ 1%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o +[ 1%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o +[ 1%] Generating ../generated/VTML80.out.h +[ 2%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o [ 2%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_random.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cc -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -MD -MT lib/mmseqs/lib/microtar/CMakeFiles/microtar.dir/microtar.c.o -MF CMakeFiles/microtar.dir/microtar.c.o.d -o CMakeFiles/microtar.dir/microtar.c.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar/microtar.c -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true VTML40.out +[ 2%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprob.cpp.o [ 2%] Building C object lib/mmseqs/lib/tinyexpr/CMakeFiles/tinyexpr.dir/tinyexpr.c.o -[ 3%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lambda_calculator.cpp.o +[ 2%] Building CXX object src/version/CMakeFiles/version.dir/Version.cpp.o cd 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/usr/bin/c++ -DGIT_SHA1=7-bba0d80+ds-1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/version/Version.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cc -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version && /usr/bin/c++ -DGIT_SHA1=7-bba0d80+ds-1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT src/version/CMakeFiles/version.dir/Version.cpp.o -MF CMakeFiles/version.dir/Version.cpp.o.d -o CMakeFiles/version.dir/Version.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/version/Version.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/predictexons.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/predictexons.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl VTML40.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML80.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/predictexons.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/predictexons.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/predictexons.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/predictexons.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML80.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML80.out.h -[ 4%] Linking CXX static library libversion.a -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/VTML40.out.h [ 5%] Generating ../generated/nucleotide.out.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide.out +[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o +[ 6%] Generating ../generated/easypredict.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogprobproto.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easypredict.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl nucleotide.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -/usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o -/usr/bin/ranlib libversion.a -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easypredict.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h [ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstat.cpp.o -[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h -[ 6%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o +[ 7%] Linking CXX static library libversion.a +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version && /usr/bin/cmake -P CMakeFiles/version.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogprobproto.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogprobproto.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/lubksb.cpp.o -MF CMakeFiles/cacode.dir/lubksb.cpp.o.d -o CMakeFiles/cacode.dir/lubksb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode/lubksb.cpp -[ 6%] Built target local-generated -[ 6%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -[ 6%] Built target version -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp -[ 7%] Generating ../generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -[ 8%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/ludcmp.cpp.o -MF CMakeFiles/cacode.dir/ludcmp.cpp.o.d -o CMakeFiles/cacode.dir/ludcmp.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode/ludcmp.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp -[ 9%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp -[ 9%] Generating ../generated/PAM30.out.h -[ 10%] Linking C static library libmicrotar.a -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide.out.h +[ 7%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/src/version && /usr/bin/cmake -E cmake_link_script CMakeFiles/version.dir/link.txt --verbose=1 +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -MF CMakeFiles/cacode.dir/nrutil.cpp.o.d -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode/nrutil.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/easypredict.sh.h +[ 7%] Generating ../generated/taxtocontig.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxtocontig.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxtocontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c: In function ‘base’: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:373:16: warning: array subscript ‘te_expr[0]’ is partly outside array bounds of ‘unsigned char[16]’ [-Warray-bounds=] 373 | ret->bound = s->bound; @@ -721,267 +738,286 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr/tinyexpr.c:88:20: note: object of size 16 allocated by ‘malloc’ 88 | te_expr *ret = malloc(size); | ^~~~~~~~~~~~ -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 +[ 8%] Generating ../generated/blosum62.out.h +[ 8%] Generating ../generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blosum62.out +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true PAM30.out cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +/usr/bin/ar qc libversion.a CMakeFiles/version.dir/Version.cpp.o +/usr/bin/ranlib libversion.a +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated/taxtocontig.sh.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blosum62.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl PAM30.out > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o -/usr/bin/ranlib libmicrotar.a make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -[ 11%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -[ 11%] Built target microtar -[ 11%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp +[ 9%] Linking C static library libmicrotar.a +[ 10%] Built target version +[ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o +[ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -P CMakeFiles/microtar.dir/cmake_clean_target.cmake +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_sim.cpp.o -MF CMakeFiles/alp.dir/sls_alp_sim.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_sim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_sim.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatmatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatmatrix.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h -[ 11%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h +[ 10%] Built target local-generated +[ 10%] Generating ../generated/CovSeqidQscPercMinDiag.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiag.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/microtar && /usr/bin/cmake -E cmake_link_script CMakeFiles/microtar.dir/link.txt --verbose=1 cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -[ 11%] Building CXX object lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/cacode && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/cacode/CMakeFiles/cacode.dir/nrutil.cpp.o -MF CMakeFiles/cacode.dir/nrutil.cpp.o.d -o CMakeFiles/cacode.dir/nrutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode/nrutil.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiag.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h -[ 12%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/PAM30.out.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blosum62.out.h +[ 10%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_pvalues.cpp.o -MF CMakeFiles/alp.dir/sls_pvalues.cpp.o.d -o CMakeFiles/alp.dir/sls_pvalues.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_pvalues.cpp +[ 11%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h +[ 11%] Generating ../generated/CovSeqidQscPercMinDiagTargetCov.lib.h +/usr/bin/ar qc libmicrotar.a CMakeFiles/microtar.dir/microtar.c.o +/usr/bin/ranlib libmicrotar.a cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true CovSeqidQscPercMinDiagTargetCov.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h -[ 12%] Generating ../generated/ExpOpt3_8_polished.cs32.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true ExpOpt3_8_polished.cs32.lib cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl CovSeqidQscPercMinDiagTargetCov.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl ExpOpt3_8_polished.cs32.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h -[ 12%] Generating ../generated/Library255_may17.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiag.lib.h +[ 11%] Built target microtar +[ 11%] Generating ../generated/Library255_may17.lib.h +[ 11%] Generating ../generated/libPolished_8.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true Library255_may17.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl Library255_may17.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/CovSeqidQscPercMinDiagTargetCov.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/ExpOpt3_8_polished.cs32.lib.h -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp -[ 12%] Built target ksw2 -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h -[ 13%] Generating ../generated/cs219.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl libPolished_8.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h +[ 12%] Generating ../generated/cs219.lib.h +[ 13%] Generating ../generated/krona_prelude.html.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true cs219.lib -[ 13%] Generating ../generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true libPolished_8.lib +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true krona_prelude.html +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl libPolished_8.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl cs219.lib > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h -[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp -[ 13%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/libPolished_8.lib.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h -[ 14%] Generating ../generated/krona_prelude.html.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true krona_prelude.html -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/Library255_may17.lib.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl krona_prelude.html > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -[ 15%] Generating ../generated/result_viz_prelude.html.zst.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp +[ 14%] Generating ../generated/result_viz_prelude.html.zst.h +[ 15%] Generating ../generated/K4000.crf.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true result_viz_prelude.html.zst -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl result_viz_prelude.html.zst > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h -[ 16%] Linking C static library libtinyexpr.a -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp -/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o -/usr/bin/ranlib libtinyexpr.a -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h -[ 17%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp.cpp -[ 18%] Generating ../generated/K4000.crf.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true K4000.crf cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cs219.lib.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl result_viz_prelude.html.zst > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl K4000.crf > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/K4000.crf.h -[ 18%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -[ 18%] Built target tinyexpr -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp -make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' -[ 18%] Generating ../generated/easysearch.sh.h +[ 15%] Generating ../generated/easysearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easysearch.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -[ 18%] Built target cacode cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easysearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h -[ 19%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_basic.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/result_viz_prelude.html.zst.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easysearch.sh.h -[ 19%] Generating ../generated/easycluster.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/krona_prelude.html.h +[ 15%] Generating ../generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easycluster.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -[ 19%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easycluster.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h -[ 20%] Generating ../generated/easytaxonomy.sh.h +[ 16%] Generating ../generated/easytaxonomy.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easytaxonomy.sh +[ 17%] Generating ../generated/easyrbh.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easyrbh.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easytaxonomy.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easyrbh.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h +[ 18%] Linking C static library libtinyexpr.a +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -P CMakeFiles/tinyexpr.dir/cmake_clean_target.cmake cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easycluster.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easytaxonomy.sh.h -[ 21%] Generating ../generated/easyrbh.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true easyrbh.sh -[ 21%] Generating ../generated/blastp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/tinyexpr && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinyexpr.dir/link.txt --verbose=1 +[ 19%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o +[ 19%] Generating ../generated/blastp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -MF CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o.d -o CMakeFiles/alp.dir/njn_dynprogproblim.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_dynprogproblim.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastp.sh +[ 19%] Generating ../generated/blastpgp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +/usr/bin/ar qc libtinyexpr.a CMakeFiles/tinyexpr.dir/tinyexpr.c.o +/usr/bin/ranlib libtinyexpr.a +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' +[ 19%] Built target cacode cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl easyrbh.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h +[ 19%] Built target tinyexpr cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/easyrbh.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h -[ 21%] Generating ../generated/blastpgp.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastpgp.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastpgp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h -[ 21%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp +[ 19%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -MF CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o.d -o CMakeFiles/alp.dir/sls_alignment_evaluer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alignment_evaluer.cpp +[ 19%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_regression.cpp.o -MF CMakeFiles/alp.dir/sls_alp_regression.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_regression.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_regression.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastp.sh.h +make[3]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastpgp.sh.h -[ 21%] Generating ../generated/map.sh.h +[ 20%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp.cpp.o -MF CMakeFiles/alp.dir/sls_alp.cpp.o.d -o CMakeFiles/alp.dir/sls_alp.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp.cpp +[ 20%] Generating ../generated/map.sh.h +[ 20%] Built target ksw2 +[ 20%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o +[ 20%] Generating ../generated/rbh.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -MF CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o.d -o CMakeFiles/alp.dir/njn_localmaxstatutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_localmaxstatutil.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true map.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl map.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h -[ 21%] Generating ../generated/rbh.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true rbh.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl rbh.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h -[ 22%] Generating ../generated/linclust.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl map.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h +[ 21%] Generating ../generated/linclust.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true linclust.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl linclust.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/map.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/rbh.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp +[ 22%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o [ 22%] Generating ../generated/clustering.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_basic.cpp.o -MF CMakeFiles/alp.dir/sls_basic.cpp.o.d -o CMakeFiles/alp.dir/sls_basic.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_basic.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true clustering.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl linclust.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linclust.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h [ 22%] Generating ../generated/cascaded_clustering.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true cascaded_clustering.sh -[ 23%] Generating ../generated/update_clustering.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true update_clustering.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl cascaded_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl update_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/clustering.sh.h +[ 22%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/sls_alp_data.cpp.o -MF CMakeFiles/alp.dir/sls_alp_data.cpp.o.d -o CMakeFiles/alp.dir/sls_alp_data.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/sls_alp_data.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/cascaded_clustering.sh.h +[ 23%] Generating ../generated/update_clustering.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true update_clustering.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated [ 24%] Generating ../generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true searchtargetprofile.sh -[ 25%] Generating ../generated/createindex.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl update_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -[ 25%] Generating ../generated/createtaxdb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/update_clustering.sh.h +[ 24%] Generating ../generated/createtaxdb.sh.h +[ 25%] Generating ../generated/createindex.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true createtaxdb.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true createindex.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl createindex.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createindex.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl createtaxdb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createindex.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createindex.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createindex.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/createtaxdb.sh.h +[ 25%] Generating ../generated/taxpercontig.sh.h [ 26%] Generating ../generated/translated_search.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true translated_search.sh -[ 26%] Generating ../generated/taxpercontig.sh.h -[ 27%] Generating ../generated/multihitdb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxpercontig.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true translated_search.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxpercontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl translated_search.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxpercontig.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxpercontig.sh.h -[ 28%] Generating ../generated/blastn.sh.h -[ 28%] Generating ../generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastn.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp +[ 27%] Generating ../generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true multihitdb.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/translated_search.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitdb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h +[ 27%] Generating ../generated/multihitsearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true multihitsearch.sh -[ 28%] Generating ../generated/enrich.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitsearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitdb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp +[ 27%] Generating ../generated/enrich.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true enrich.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp +[ 27%] Building CXX object lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/lib/alp && /usr/bin/c++ -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -w -MD -MT lib/mmseqs/lib/alp/CMakeFiles/alp.dir/njn_ioutil.cpp.o -MF CMakeFiles/alp.dir/njn_ioutil.cpp.o.d -o CMakeFiles/alp.dir/njn_ioutil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp/njn_ioutil.cpp +[ 28%] Generating ../generated/blastn.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true blastn.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl blastn.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastn.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl multihitsearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl enrich.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastn.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastn.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/blastn.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/multihitsearch.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/enrich.sh.h +[ 28%] Generating ../generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxonomy.sh [ 28%] Generating ../generated/searchslicedtargetprofile.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h -[ 28%] Generating ../generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxonomy.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true searchslicedtargetprofile.sh [ 28%] Generating ../generated/linsearch.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true linsearch.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true taxonomy.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl taxonomy.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl searchslicedtargetprofile.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl linsearch.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/taxonomy.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/searchslicedtargetprofile.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/linsearch.sh.h [ 28%] Generating ../generated/databases.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true databases.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated [ 28%] Generating ../generated/nucleotide_clustering.sh.h [ 28%] Generating ../generated/iterativepp.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true nucleotide_clustering.sh -[ 28%] Generating ../generated/tsv2exprofiledb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true iterativepp.sh -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true tsv2exprofiledb.sh cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl tsv2exprofiledb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl databases.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl nucleotide_clustering.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl iterativepp.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/nucleotide_clustering.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/iterativepp.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/databases.sh.h +[ 28%] Generating ../generated/tsv2exprofiledb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/checkshell.sh true tsv2exprofiledb.sh +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mkdir -p /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/cmake/xxdi.pl tsv2exprofiledb.sh > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/workflow && mv -f /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h.tmp /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/tsv2exprofiledb.sh.h cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/K4000.crf.h > /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated/K4000.crf.h.tmp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/data/resources && mv -f 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/BandedNucleotideAligner.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/alignment/StripedSmithWaterman.cpp.o -MF CMakeFiles/mmseqs-framework.dir/alignment/StripedSmithWaterman.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/alignment/StripedSmithWaterman.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/StripedSmithWaterman.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/Main.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/Main.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/Main.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/Main.cpp +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/AlignmentSymmetry.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/BandedNucleotideAligner.cpp:7: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -1091,9 +1127,10 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Main.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1121,20 +1158,24 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 100 | SeqProf(T first) { | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 105 | SeqProf(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/StripedSmithWaterman.cpp:26: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 105 | SeqProf(T first, T second) { - | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 35 | NuclAA(T first) { @@ -1162,10 +1203,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Main.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.cpp:7: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1200,10 +1240,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.cpp:7: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MultipleAlignment.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1238,9 +1277,10 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/CompressedA3M.cpp:7: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.cpp:7: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1274,10 +1314,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.h:12, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/StripedSmithWaterman.cpp:26: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1312,8 +1349,10 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.h:6, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1348,10 +1387,8 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Alignment.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1386,10 +1423,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.h:6, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/PSSMCalculator.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.h:12, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/AlignmentSymmetry.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1459,8 +1495,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/ClusteringAlgorithms.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1498,12 +1532,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 33%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -MF CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/clustering/ClusteringAlgorithms.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering/ClusteringAlgorithms.cpp [ 34%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/CSProfile.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/A3MReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/A3MReader.cpp [ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Application.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Application.cpp +[ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/BaseMatrix.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1541,8 +1579,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/BaseMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/BaseMatrix.cpp [ 35%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Command.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 36%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/CommandCaller.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBConcat.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Command.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -1616,10 +1654,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 36%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBConcat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBConcat.cpp -[ 36%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/BaseMatrix.cpp:8: @@ -1655,10 +1689,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 37%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBWriter.cpp -[ 37%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Debug.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1695,6 +1725,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 36%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.cpp +[ 37%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/DBWriter.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBWriter.cpp +[ 37%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/commons/Debug.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Debug.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -1770,10 +1806,10 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ExpressionParser.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.cpp [ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/HeaderSummarizer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/HeaderSummarizer.cpp +[ 38%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/FileUtil.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.cpp [ 39%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/KSeqWrapper.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -1854,6 +1890,12 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/MMseqsMPI.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MMseqsMPI.cpp [ 40%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/MultiParam.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.cpp +[ 41%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.cpp +[ 41%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Orf.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Orf.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Orf.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Orf.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.cpp +[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { @@ -1887,6 +1929,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MMseqsMPI.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -1921,18 +1965,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 41%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/NucleotideMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Parameters.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp -[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/ProfileStates.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.cpp -[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/LibraryReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -1965,12 +2003,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 42%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/LibraryReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/LibraryReader.cpp +[ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2040,8 +2078,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Sequence.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.cpp +[ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SequenceWeights.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -2078,10 +2116,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 43%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SequenceWeights.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.cpp:1: @@ -2117,15 +2151,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 44%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/tantan.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/UniprotKB.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2158,15 +2188,19 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 44%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/SubstitutionMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/tantan.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/UniprotKB.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/UniprotKB.cpp [ 45%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o -MF CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/commons/Util.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Util.cpp -[ 45%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2199,16 +2233,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o +[ 45%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/CacheFriendlyOperations.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp [ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Indexer.cpp cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ExtendedSubstitutionMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ExtendedSubstitutionMatrix.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/IndexTable.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Util.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2242,8 +2273,11 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Util.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/IndexTable.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2276,18 +2310,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Indexer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Indexer.cpp [ 46%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -[ 47%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/IndexBuilder.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/IndexBuilder.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/KmerGenerator.cpp -[ 47%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Main.cpp /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp:30:35: warning: template-id not allowed for destructor in C++20 [-Wtemplate-id-cdtor] 30 | CacheFriendlyOperations::~CacheFriendlyOperations(){ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/CacheFriendlyOperations.cpp:30:35: note: remove the ‘< >’ -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp +[ 47%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/KmerGenerator.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/KmerGenerator.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -2326,6 +2358,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 47%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Main.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/Prefiltering.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp [ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/PrefilteringIndexReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -2363,9 +2399,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/QueryMatcher.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/IndexTable.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.h:5, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2398,14 +2439,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 48%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/QueryMatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/QueryMatcher.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/IndexTable.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.h:5, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/PrefilteringIndexReader.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/Prefiltering.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2438,6 +2474,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ReducedMatrix.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -2475,8 +2513,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ReducedMatrix.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ReducedMatrix.cpp [ 49%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/SequenceLookup.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/SequenceLookup.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -2519,6 +2555,10 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/UngappedAlignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/UngappedAlignment.cpp [ 50%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/prefiltering/ungappedprefilter.cpp.o cd 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CMakeFiles/mmseqs-framework.dir/prefiltering/ungappedprefilter.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/prefiltering/ungappedprefilter.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ungappedprefilter.cpp +[ 50%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp +[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/combinepvalperset.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -2557,15 +2597,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 50%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/besthitperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp -[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/combinepvalperset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/combinepvalperset.cpp -[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ungappedprefilter.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2598,12 +2631,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitDb.cpp -[ 52%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitSearch.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/besthitperset.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/combinepvalperset.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2637,24 +2666,12 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp:1: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 26 | NuclAA(const NuclAA &value) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 33 | NuclAA() {} - | ^ -In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/combinepvalperset.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering/ungappedprefilter.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 33 | NuclAA() {} | ^ @@ -2667,13 +2684,6 @@ 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 35 | NuclAA(T first) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 40 | NuclAA(T first, T second) { - | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ @@ -2685,12 +2695,36 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 100 | SeqProf(T first) { | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/Aggregation.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp +[ 51%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitDb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitDb.cpp +In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/Aggregation.cpp:1: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 26 | NuclAA(const NuclAA &value) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 33 | NuclAA() {} + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 35 | NuclAA(T first) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 40 | NuclAA(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ @@ -2707,6 +2741,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 52%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/multihit/MultiHitSearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitSearch.cpp +[ 52%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/lca.cpp +[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/addtaxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 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included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit/MultiHitDb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2775,20 +2815,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 52%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/lca.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/aggregatetax.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/aggregatetax.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/lca.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/addtaxonomy.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2822,8 +2852,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/NcbiTaxonomy.cpp:6: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/lca.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2856,10 +2885,9 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createtaxdb.cpp.o -cd 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CMakeFiles/mmseqs-framework.dir/taxonomy/createtaxdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createtaxdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/addtaxonomy.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/NcbiTaxonomy.cpp:6: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -2892,6 +2920,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 53%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/filtertaxdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createtaxdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/filtertaxdb.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -2994,8 +3030,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createtaxdb.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3030,6 +3064,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 55%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxonomy.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3068,6 +3104,8 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o -MF CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/taxonomy/createbintaxmapping.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxmapping.cpp [ 56%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/taxonomy/taxonomyreport.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/createbintaxmapping.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3102,19 +3140,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 56%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/kmermatcher.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp [ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/kmerindexdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmerindexdb.cpp -[ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o -MF CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/taxonomyreport.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3147,14 +3176,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignall.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmerindexdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3187,8 +3213,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 57%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/linclust/kmersearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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CMakeFiles/mmseqs-framework.dir/linclust/LinsearchIndexReader.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy/taxonomyreport.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmerindexdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3221,8 +3255,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -3297,6 +3329,55 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +In file included from /usr/include/c++/14/algorithm:60, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd/simd.h:9, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:9: +In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, + inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, + inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, + inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 2]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:383:14, + inlined from ‘float* CSProfile::computeProfileCs(int, float*, float*, float, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:350:58: +/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] + 952 | *__first = __tmp; + | ~~~~~~~~~^~~~~~~ +In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, + inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, + inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, + inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 2]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:14, + inlined from ‘float* CSProfile::computeProfileCs(int, float*, float*, float, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:350:58: +/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified size between 18446743867551121408 and 18446744073709551520 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] + 952 | *__first = __tmp; + | ~~~~~~~~~^~~~~~~ +In member function ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 2]’, + inlined from ‘float* CSProfile::computeProfileCs(int, float*, float*, float, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:350:58: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:24: note: destination object allocated here + 418 | std::fill(profile, profile + (seqLen * (Sequence::PROFILE_AA_SIZE + 4)), 0.0); + | ^~~~~~~ +[ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignall.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignall.cpp +In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, + inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, + inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, + inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 0]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:383:14, + inlined from ‘float* CSProfile::computeSequenceCs(unsigned char*, int, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:354:58: +/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] + 952 | *__first = __tmp; + | ~~~~~~~~~^~~~~~~ +In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, + inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, + inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, + inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 0]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:14, + inlined from ‘float* CSProfile::computeSequenceCs(unsigned char*, int, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:354:58: +/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified size between 18446743867551121408 and 18446744073709551520 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] + 952 | *__first = __tmp; + | ~~~~~~~~~^~~~~~~ +In member function ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 0]’, + inlined from ‘float* CSProfile::computeSequenceCs(unsigned char*, int, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:354:58: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:24: note: destination object allocated here + 418 | std::fill(profile, profile + (seqLen * (Sequence::PROFILE_AA_SIZE + 4)), 0.0); + | ^~~~~~~ +[ 58%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/alignbykmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignall.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3331,6 +3412,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/appenddbtoindex.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/DistanceCalculator.h:11, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/alignbykmer.cpp:1: @@ -3366,8 +3449,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/appenddbtoindex.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/appenddbtoindex.cpp +[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/appenddbtoindex.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3402,53 +3485,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/apply.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp -In file included from /usr/include/c++/14/algorithm:60, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd/simd.h:9, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:9: -In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, - inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, - inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, - inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 2]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:383:14, - inlined from ‘float* CSProfile::computeProfileCs(int, float*, float*, float, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:350:58: -/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] - 952 | *__first = __tmp; - | ~~~~~~~~~^~~~~~~ -In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, - inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, - inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, - inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 2]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:14, - inlined from ‘float* CSProfile::computeProfileCs(int, float*, float*, float, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:350:58: -/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified size between 18446743867551121408 and 18446744073709551520 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] - 952 | *__first = __tmp; - | ~~~~~~~~~^~~~~~~ -In member function ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 2]’, - inlined from ‘float* CSProfile::computeProfileCs(int, float*, float*, float, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:350:58: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:24: note: destination object allocated here - 418 | std::fill(profile, profile + (seqLen * (Sequence::PROFILE_AA_SIZE + 4)), 0.0); - | ^~~~~~~ -In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, - inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, - inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, - inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 0]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:383:14, - inlined from ‘float* CSProfile::computeSequenceCs(unsigned char*, int, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:354:58: -/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744065119617024 and 18446744073709551612 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] - 952 | *__first = __tmp; - | ~~~~~~~~~^~~~~~~ -In function ‘typename __gnu_cxx::__enable_if::__value, void>::__type std::__fill_a1(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’, - inlined from ‘void std::__fill_a(_FIte, _FIte, const _Tp&) [with _FIte = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:998:21, - inlined from ‘void std::fill(_ForwardIterator, _ForwardIterator, const _Tp&) [with _ForwardIterator = float*; _Tp = double]’ at /usr/include/c++/14/bits/stl_algobase.h:1029:20, - inlined from ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 0]’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:14, - inlined from ‘float* CSProfile::computeSequenceCs(unsigned char*, int, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:354:58: -/usr/include/c++/14/bits/stl_algobase.h:952:18: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified size between 18446743867551121408 and 18446744073709551520 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] - 952 | *__first = __tmp; - | ~~~~~~~~~^~~~~~~ -In member function ‘float* CSProfile::computeProfile(unsigned char*, int, float*, float*, float, float, float) [with int type = 0]’, - inlined from ‘float* CSProfile::computeSequenceCs(unsigned char*, int, float)’ at /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:354:58: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.cpp:418:24: note: destination object allocated here - 418 | std::fill(profile, profile + (seqLen * (Sequence::PROFILE_AA_SIZE + 4)), 0.0); - | ^~~~~~~ +[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/clusthash.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/apply.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3483,14 +3521,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 59%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/clusthash.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/clusthash.cpp -[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp -[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convert2fasta.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBWriter.h:9, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/clusthash.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3523,11 +3558,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/compress.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBWriter.h:9, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/clusthash.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/compress.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3560,6 +3594,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 60%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convert2fasta.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convert2fasta.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convert2fasta.cpp:9: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3598,8 +3634,10 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertalignments.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertalignments.cpp [ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertca3m.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertca3m.cpp +[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertkb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertalignments.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertca3m.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3632,14 +3670,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 61%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertkb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp -[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertca3m.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertkb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3672,12 +3704,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp -[ 63%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/dbtype.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertalignments.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3710,8 +3738,15 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/convertmsa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp +[ 62%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/convertprofiledb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertkb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp:8: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3745,10 +3780,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertmsa.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3781,9 +3813,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 63%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/dbtype.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/dbtype.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createdb.cpp:8: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/convertprofiledb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -3856,6 +3892,8 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/util/db2tar.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/db2tar.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/db2tar.cpp [ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/indexdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/indexdb.cpp +[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/db2tar.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3926,10 +3964,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/offsetalignment.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp -[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createseqfiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/offsetalignment.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -3964,10 +3998,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 64%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createseqfiledb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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CMakeFiles/mmseqs-framework.dir/util/createsubdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createsubdb.cpp -[ 65%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/view.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/view.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/view.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -4004,6 +4038,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 65%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/view.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/view.cpp [ 66%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createtsv.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createtsv.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -4112,8 +4148,6 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/diffseqdbs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diffseqdbs.cpp [ 66%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/expandaln.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp -[ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-MF CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractalignedregion.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diffseqdbs.cpp:10: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4148,6 +4182,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractalignedregion.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractalignedregion.cpp +[ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp +[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp +[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4161,7 +4205,6 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 35 | NuclAA(T first) { | ^ -[ 67%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 40 | NuclAA(T first, T second) { @@ -4183,9 +4226,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractdomains.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractdomains.cpp -[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractorfs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -4223,10 +4263,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/orftocontig.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp -[ 68%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/touchdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractdomains.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4262,7 +4298,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4296,7 +4332,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/orftocontig.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4330,7 +4366,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/touchdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractorfs.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4363,20 +4399,17 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/expandaln.cpp:78:13: warning: ‘bool compareHitsByKeyScore(const Matcher::result_t&, const Matcher::result_t&)’ defined but not used [-Wunused-function] 78 | static bool compareHitsByKeyScore(const Matcher::result_t &first, const Matcher::result_t &second) { | ^~~~~~~~~~~~~~~~~~~~~ -[ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/filtera3m.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp [ 69%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/filterdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filterdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4396,21 +4429,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 98 | SeqProf() {} - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 100 | SeqProf(T first) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 105 | SeqProf(T first, T second) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filtera3m.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4427,9 +4448,22 @@ 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 98 | SeqProf() {} + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 100 | SeqProf(T first) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:100:16: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 105 | SeqProf(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 98 | SeqProf() {} @@ -4443,8 +4477,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/renamedbkeys.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/filterdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/gff2db.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4477,10 +4515,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp +[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/gff2db.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/renamedbkeys.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4513,12 +4553,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 70%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/makepaddedseqdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp -[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/masksequence.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/makepaddedseqdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -4553,14 +4587,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeclusters.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeresultsbyset.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4593,12 +4625,20 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 71%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/maskbygff.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergeresultsbyset.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeresultsbyset.cpp +[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergedbs.cpp +[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createclusterdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/NucleotideMatrix.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/masksequence.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/maskbygff.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4667,14 +4707,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 72%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/mergedbs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergedbs.cpp -[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/createclusterdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/createclusterdb.cpp +[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2profile.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeresultsbyset.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergedbs.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4707,13 +4746,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2profile.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/IndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergedbs.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/mergeresultsbyset.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -4746,12 +4782,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2result.cpp -[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/nrtotaxmapping.cpp -[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -4824,6 +4854,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 73%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/msa2result.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/msa2result.cpp +[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/nrtotaxmapping.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/nrtotaxmapping.cpp +[ 74%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/countkmer.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp +[ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/pairaln.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, @@ -4862,8 +4900,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/pairaln.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/pairaln.cpp [ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/prefixid.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/prefixid.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, @@ -4879,32 +4915,11 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 35 | NuclAA(T first) { | ^ -In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp:1: -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 26 | NuclAA(const NuclAA &value) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 40 | NuclAA(T first, T second) { - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 33 | NuclAA() {} - | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 35 | NuclAA(T first) { - | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] - 91 | SeqProf(const SeqProf &value) { - | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ @@ -4921,6 +4936,27 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/countkmer.cpp:1: +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 26 | NuclAA(const NuclAA &value) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 33 | NuclAA() {} + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:33:14: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 35 | NuclAA(T first) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:35:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 40 | NuclAA(T first, T second) { + | ^ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] + 91 | SeqProf(const SeqProf &value) { + | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:98:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 98 | SeqProf() {} @@ -5004,8 +5040,6 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 75%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/profile2pssm.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2pssm.cpp -[ 76%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2pssm.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5040,6 +5074,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 76%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2neff.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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CMakeFiles/mmseqs-framework.dir/util/profile2seq.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2seq.cpp +[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/recoverlongestorf.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/profile2neff.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5074,10 +5114,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 76%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/profile2seq.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/recoverlongestorf.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/recoverlongestorf.cpp +[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5112,10 +5150,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2dnamsa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2dnamsa.cpp -[ 77%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/recoverlongestorf.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5150,10 +5184,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 78%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2flat.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2dnamsa.cpp:6: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5186,10 +5222,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 78%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/result2msa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2msa.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2dnamsa.cpp:6: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2flat.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5303,11 +5339,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2profile.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2repseq.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5341,7 +5373,11 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2repseq.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/MsaFilter.h:9, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/result2profile.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5413,10 +5449,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 80%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/cpmvrmlndb.cpp -[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractframes.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/reverseseq.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5451,6 +5483,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 80%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/cpmvrmlndb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/cpmvrmlndb.cpp +[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/extractframes.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractframes.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/cpmvrmlndb.cpp:1: @@ -5486,6 +5522,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sequence2profile.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/extractframes.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5520,12 +5558,17 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/sequence2profile.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sequence2profile.cpp [ 81%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/setextendeddbtype.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/setextendeddbtype.cpp +[ 82%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sortresult.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sortresult.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/sortresult.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/sortresult.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sortresult.cpp +[ 82%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/setextendeddbtype.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sequence2profile.cpp:5: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5542,7 +5585,6 @@ 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ -[ 82%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/sortresult.cpp.o /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ @@ -5559,14 +5601,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/util/sortresult.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sortresult.cpp -[ 82%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/splitdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitdb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/CSProfile.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sequence2profile.cpp:5: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/setextendeddbtype.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5599,14 +5635,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 83%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitsequence.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/subtractdbs.cpp -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizealis.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizealis.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitdb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sortresult.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5640,7 +5670,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/sortresult.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5673,8 +5703,22 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 83%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/splitsequence.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeheaders.cpp +[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizetabs.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitsequence.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/subtractdbs.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5707,14 +5751,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 84%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizeheaders.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeheaders.cpp -[ 84%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizeresult.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeresult.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/subtractdbs.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/splitsequence.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5747,6 +5785,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizealis.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5815,10 +5855,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/summarizetabs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizetabs.cpp -[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/swapresults.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizeresult.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5853,8 +5889,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/summarizetabs.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -5890,7 +5924,9 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5923,10 +5959,18 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 85%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/transitivealign.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp +[ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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CMakeFiles/mmseqs-framework.dir/util/translateaa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translateaa.cpp +[ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp +[ 87%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp 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-ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/swapresults.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/transitivealign.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -5959,17 +6003,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/translatenucs.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translatenucs.cpp -[ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/translateaa.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/util/translateaa.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translateaa.cpp -[ 86%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.h:6, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translatenucs.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6002,13 +6037,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 87%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tsv2exprofiledb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translateaa.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment/Matcher.h:15, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Orf.h:6, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translatenucs.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6042,7 +6075,10 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/ProfileStates.h:11, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/SubstitutionMatrix.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/translateaa.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6076,7 +6112,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2exprofiledb.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tsv2db.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6113,10 +6149,6 @@ cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/tar2db.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tar2db.cpp [ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/unpackdb.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/unpackdb.cpp -[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/proteinaln2nucl.cpp -[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/versionstring.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/tar2db.cpp:1: @@ -6152,8 +6184,6 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 89%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/unpackdb.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -6188,10 +6218,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 89%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Cluster.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust 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CMakeFiles/mmseqs-framework.dir/util/proteinaln2nucl.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/proteinaln2nucl.cpp +[ 88%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/versionstring.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -MF CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/util/diskspaceavail.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Cluster.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/proteinaln2nucl.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6225,7 +6259,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/proteinaln2nucl.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6258,9 +6293,14 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 89%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Cluster.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/ClusterUpdate.cpp +[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util/diskspaceavail.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Cluster.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6293,12 +6333,12 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/ClusterUpdate.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit 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-[ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Databases.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Databases.cpp [ 90%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Linclust.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linclust.cpp +[ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering 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CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyRbh.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/ClusterUpdate.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] @@ -6401,18 +6441,8 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 91%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasySearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 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Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyRbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyRbh.cpp [ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyCluster.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyCluster.cpp -[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp -[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp -[ 93%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linsearch.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, @@ -6452,8 +6482,11 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyRbh.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6486,8 +6519,11 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/EasyLinclust.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyCluster.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6520,12 +6556,13 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 92%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Enrich.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp +[ 93%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Linsearch.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linsearch.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/kmermatcher.h:3, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust/LinsearchIndexReader.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyRbh.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyLinclust.cpp:3: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6560,9 +6597,12 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ [ 93%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Map.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Map.cpp +[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment 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CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Rbh.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Rbh.cpp +[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyCluster.cpp:3: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Enrich.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6595,10 +6635,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/generated -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/Taxonomy.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Taxonomy.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linsearch.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Map.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6632,7 +6672,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Map.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Rbh.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6665,21 +6706,10 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ -[ 94%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/Search.cpp.o -cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/ksw2 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/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Rbh.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Linsearch.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6712,8 +6742,16 @@ 105 | SeqProf(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ +[ 95%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/EasyTaxonomy.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 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lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/workflow/CreateIndex.cpp.o -MF CMakeFiles/mmseqs-framework.dir/workflow/CreateIndex.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/workflow/CreateIndex.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/CreateIndex.cpp +[ 96%] Building CXX object lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/MMseqsBase.cpp.o +cd /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/lib/mmseqs/src && /usr/bin/c++ -DENABLE_IPS4O=1 -DHAVE_BZLIB=1 -DHAVE_POSIX_FADVISE=1 -DHAVE_POSIX_MADVISE=1 -DOPENMP=1 -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/tinyexpr -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/microtar -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/simd -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/alp -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/lib/cacode 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT lib/mmseqs/src/CMakeFiles/mmseqs-framework.dir/MMseqsBase.cpp.o -MF CMakeFiles/mmseqs-framework.dir/MMseqsBase.cpp.o.d -o CMakeFiles/mmseqs-framework.dir/MMseqsBase.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/MMseqsBase.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyTaxonomy.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6747,7 +6785,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/CreateIndex.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Taxonomy.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6781,7 +6819,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Taxonomy.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/MMseqsBase.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6815,7 +6853,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/MMseqsBase.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/EasyTaxonomy.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6849,9 +6887,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Sequence.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/DBReader.h:13, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/Search.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/workflow/CreateIndex.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | 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-I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/alignment -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/clustering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/multihit -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/prefiltering -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/linclust -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/taxonomy -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/util -I/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/. -g -O2 -ffile-prefix-map=/build/reproducible-path/metaeuk-7-bba0d80+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -std=c++1y -pedantic -Wall -Wextra -Wdisabled-optimization -fno-exceptions -fopenmp -MD -MT src/CMakeFiles/metaeuk.dir/metaeuk.cpp.o -MF CMakeFiles/metaeuk.dir/metaeuk.cpp.o.d -o CMakeFiles/metaeuk.dir/metaeuk.cpp.o -c /build/reproducible-path/metaeuk-7-bba0d80+ds/src/metaeuk.cpp In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/reduceredundancy.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/groupstoacc.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6949,10 +6985,9 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 105 | SeqProf(T first, T second) { | ^ -/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/collectoptimalset.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/reduceredundancy.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -6969,6 +7004,7 @@ 40 | NuclAA(T first, T second) { | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:40:15: note: remove the ‘< >’ +/build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:91:15: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 91 | SeqProf(const SeqProf &value) { | ^ @@ -6987,7 +7023,7 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/groupstoacc.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/unitesetstofasta.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7022,7 +7058,7 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/metaeuk.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/collectoptimalset.cpp:1: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7056,8 +7092,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/unitesetstofasta.cpp:1: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/EasyPredict.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7091,8 +7127,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/TaxToContig.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/commons/LocalParameters.h:4, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/metaeuk.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7126,7 +7162,8 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/resultspercontig.cpp:2: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/TaxToContig.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7160,8 +7197,7 @@ | ^ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/PredictExons.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/exonpredictor/resultspercontig.cpp:2: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7196,7 +7232,7 @@ /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:105:16: note: remove the ‘< >’ In file included from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/Parameters.h:16, from /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/FileUtil.h:10, - from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/EasyPredict.cpp:4: + from /build/reproducible-path/metaeuk-7-bba0d80+ds/src/workflow/PredictExons.cpp:4: /build/reproducible-path/metaeuk-7-bba0d80+ds/lib/mmseqs/src/commons/MultiParam.h:26:14: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 26 | NuclAA(const NuclAA &value) { | ^ @@ -7238,7 +7274,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/metaeuk-7-bba0d80+ds/obj-x86_64-linux-gnu' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-8F7LK1HE + rm -fr -- /tmp/dh-xdg-rundir-2hYKYkk6 create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/metaeuk.substvars debian/metaeuk-examples.substvars @@ -7275,10 +7311,10 @@ install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples install -p -m0644 debian/copyright debian/metaeuk-examples/usr/share/doc/metaeuk-examples/copyright dh_installchangelogs - install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples - install -p -m0644 debian/.debhelper/generated/metaeuk-examples/dh_installchangelogs.dch.trimmed debian/metaeuk-examples/usr/share/doc/metaeuk-examples/changelog.Debian install -m0755 -d debian/metaeuk/usr/share/doc/metaeuk install -p -m0644 debian/.debhelper/generated/metaeuk/dh_installchangelogs.dch.trimmed debian/metaeuk/usr/share/doc/metaeuk/changelog.Debian + install -m0755 -d debian/metaeuk-examples/usr/share/doc/metaeuk-examples + install -p -m0644 debian/.debhelper/generated/metaeuk-examples/dh_installchangelogs.dch.trimmed debian/metaeuk-examples/usr/share/doc/metaeuk-examples/changelog.Debian dh_perl dh_link dh_strip_nondeterminism @@ -7297,10 +7333,10 @@ find debian/metaeuk/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk-examples/usr/share/doc -type f -a -true -a ! -regex 'debian/metaeuk-examples/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/metaeuk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk-examples/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/metaeuk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x + find debian/metaeuk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/metaeuk-examples -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/metaeuk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/metaeuk/usr/bin/metaeuk @@ -7344,18 +7380,18 @@ install -m0755 -d debian/metaeuk-examples/DEBIAN cd debian/metaeuk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/metaeuk-examples >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums chmod 0644 -- debian/metaeuk/DEBIAN/md5sums install -m0755 -d debian/.debhelper/metaeuk/dbgsym-root/DEBIAN cd debian/.debhelper/metaeuk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/metaeuk/dbgsym-root/DEBIAN/md5sums + chmod 0644 -- debian/metaeuk-examples/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/metaeuk .. dpkg-deb --root-owner-group --build debian/.debhelper/metaeuk/dbgsym-root .. dpkg-deb --root-owner-group --build debian/metaeuk-examples .. dpkg-deb: building package 'metaeuk' in '../metaeuk_7-bba0d80+ds-1_amd64.deb'. -dpkg-deb: building package 'metaeuk-examples' in '../metaeuk-examples_7-bba0d80+ds-1_all.deb'. dpkg-deb: building package 'metaeuk-dbgsym' in '../metaeuk-dbgsym_7-bba0d80+ds-1_amd64.deb'. +dpkg-deb: building package 'metaeuk-examples' in '../metaeuk-examples_7-bba0d80+ds-1_all.deb'. dpkg-genbuildinfo --build=binary -O../metaeuk_7-bba0d80+ds-1_amd64.buildinfo dpkg-genchanges --build=binary -O../metaeuk_7-bba0d80+ds-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -7363,12 +7399,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/804960/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/302232 and its subdirectories -I: Current time: Thu Dec 25 04:16:35 -12 2025 -I: pbuilder-time-stamp: 1766679395 +I: removing directory /srv/workspace/pbuilder/804960 and its subdirectories +I: Current time: Fri Nov 22 23:56:16 +14 2024 +I: pbuilder-time-stamp: 1732269376