Diff of the two buildlogs: -- --- b1/build.log 2024-12-17 00:26:05.268325364 +0000 +++ b2/build.log 2024-12-17 00:37:34.692728595 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 16 12:06:12 -12 2024 -I: pbuilder-time-stamp: 1734393972 +I: Current time: Mon Jan 19 20:49:08 +14 2026 +I: pbuilder-time-stamp: 1768805348 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -31,51 +31,83 @@ dpkg-source: info: applying 30_reproducible_builds_02.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/753271/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/D01_modify_environment starting +debug: Running on infom02-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 19 06:49 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='fc1367ae0e334d31b11ddf9bfaac24ef' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='753271' - PS1='# ' - PS2='> ' + INVOCATION_ID=263e9d25dd144e9bb7826b978a6f4c35 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3227450 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vOUhvxp4/pbuilderrc_59hz --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vOUhvxp4/b1 --logfile b1/build.log liggghts_3.8.0+repack1-12.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vOUhvxp4/pbuilderrc_xAI9 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vOUhvxp4/b2 --logfile b2/build.log liggghts_3.8.0+repack1-12.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom01-amd64 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/753271/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -748,7 +780,7 @@ Get: 621 http://deb.debian.org/debian unstable/main amd64 tk-dev amd64 8.6.14 [3896 B] Get: 622 http://deb.debian.org/debian unstable/main amd64 vtk9 amd64 9.3.0+dfsg1-1.1+b2 [20.0 kB] Get: 623 http://deb.debian.org/debian unstable/main amd64 libvtk9-dev amd64 9.3.0+dfsg1-1.1+b2 [3052 kB] -Fetched 552 MB in 12s (46.4 MB/s) +Fetched 552 MB in 8s (67.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) @@ -2754,8 +2786,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Dec 17 00:11:00 UTC 2024. -Universal Time is now: Tue Dec 17 00:11:00 UTC 2024. +Local time is now: Mon Jan 19 06:56:27 UTC 2026. +Universal Time is now: Mon Jan 19 06:56:27 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... @@ -3503,7 +3535,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-12_source.changes +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-12_source.changes dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-12 dpkg-buildpackage: info: source distribution unstable @@ -3580,8 +3616,8 @@ -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") --- Configuring done (2.3s) --- Generating done (0.0s) +-- Configuring done (1.9s) +-- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -3618,29 +3654,29 @@ make[3]: Leaving directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -MF CMakeFiles/libliggghts.dir/atom_map.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle.cpp.o -MF CMakeFiles/libliggghts.dir/angle.cpp.o.d -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom.cpp.o -MF CMakeFiles/libliggghts.dir/atom.cpp.o.d -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -MF CMakeFiles/libliggghts.dir/atom_map.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_full.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_line.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK 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-DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp @@ -3654,10 +3690,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:375:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 375 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX 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/build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -MF CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o.d -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o @@ -3670,18 +3706,16 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o -MF CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o.d -o CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp -[ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -MF CMakeFiles/libliggghts.dir/bounding_box.cpp.o.d -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK 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/build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o -MF CMakeFiles/libliggghts.dir/bounding_box.cpp.o.d -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -MF CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o.d -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/change_box.cpp.o -MF CMakeFiles/libliggghts.dir/change_box.cpp.o.d -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); @@ -3689,12 +3723,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/change_box.cpp.o -MF CMakeFiles/libliggghts.dir/change_box.cpp.o.d -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/citeme.cpp.o -MF CMakeFiles/libliggghts.dir/citeme.cpp.o.d -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/citeme.cpp -[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/comm.cpp.o -MF CMakeFiles/libliggghts.dir/comm.cpp.o.d -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp -[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute.cpp.o -MF CMakeFiles/libliggghts.dir/compute.cpp.o.d -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3705,22 +3737,26 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o +[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/comm.cpp.o -MF CMakeFiles/libliggghts.dir/comm.cpp.o.d -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp +[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute.cpp.o -MF CMakeFiles/libliggghts.dir/compute.cpp.o.d -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_atom_molecule.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o -MF CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_bond_local.cpp +[ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_cluster_atom.cpp +[ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_centro_atom.cpp -[ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_cluster_atom.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o -MF CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_bond_local.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_cna_atom.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_com.cpp.o -MF CMakeFiles/libliggghts.dir/compute_com.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_com.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK 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src/CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_com_molecule.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -MF CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_contact_atom_gran.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o @@ -3736,44 +3772,44 @@ [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_sphere.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -[ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_sphere_atom.cpp +[ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_erotate_superquadric.cpp +[ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -MF CMakeFiles/libliggghts.dir/compute_group_group.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_group_group.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -[ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -MF CMakeFiles/libliggghts.dir/compute_gyration.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_gyration.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -MF CMakeFiles/libliggghts.dir/compute_group_group.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_group_group.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_gyration_molecule.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_inertia_molecule.cpp -[ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o +[ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp -[ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK 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/build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o -MF CMakeFiles/libliggghts.dir/compute_msd.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_msd.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd.cpp +[ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_multisphere.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd_molecule.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -MF CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_nparticles_tracer_region.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o -MF CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_pair_gran_local.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -MF CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_nparticles_tracer_region.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_pe.cpp.o -MF CMakeFiles/libliggghts.dir/compute_pe.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_pe.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_pe.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o -[ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pressure.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_pe_atom.cpp +[ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pressure.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_pressure.cpp.o -MF CMakeFiles/libliggghts.dir/compute_pressure.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_pressure.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_pressure.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_atom.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_local.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_local.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -MF CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp +[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -MF CMakeFiles/libliggghts.dir/compute_rdf.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rdf.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -MF CMakeFiles/libliggghts.dir/compute_reduce.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce.cpp @@ -3783,10 +3819,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -MF CMakeFiles/libliggghts.dir/compute_rigid.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rigid.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o -MF CMakeFiles/libliggghts.dir/compute_slice.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_slice.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_slice.cpp -[ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_stress_atom.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_temp.cpp.o +[ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_temp.cpp.o -MF CMakeFiles/libliggghts.dir/compute_temp.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_temp.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_temp.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -MF CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_stress_atom.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/contact_models.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/contact_models.cpp.o -MF CMakeFiles/libliggghts.dir/contact_models.cpp.o.d -o CMakeFiles/libliggghts.dir/contact_models.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/contact_models.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/container_base.cpp.o @@ -3798,12 +3834,12 @@ [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o -MF CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o.d -o CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/custom_value_tracker.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -MF CMakeFiles/libliggghts.dir/delete_atoms.cpp.o.d -o CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/delete_atoms.cpp -[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral.cpp.o +[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -MF CMakeFiles/libliggghts.dir/delete_bonds.cpp.o.d -o CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/delete_bonds.cpp -[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o +[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dihedral.cpp.o -MF CMakeFiles/libliggghts.dir/dihedral.cpp.o.d -o CMakeFiles/libliggghts.dir/dihedral.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral.cpp +[ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -MF CMakeFiles/libliggghts.dir/displace_atoms.cpp.o.d -o CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/displace_atoms.cpp @@ -3815,6 +3851,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o +[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3825,10 +3865,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 364 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp -[ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -MF CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o @@ -3847,13 +3883,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_stl.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_vtk.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp: In constructor 'LAMMPS_NS::DumpCustom::DumpCustom(LAMMPS_NS::LAMMPS*, int, char**)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:180:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 180 | columns[0] = '\0'; - | ~~~~~~~~~~~^~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:179:23: note: destination object of size 0 allocated by 'operator new []' - 179 | columns = new char[n]; - | ^ +[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_vtm.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp: In constructor 'LAMMPS_NS::DumpLocal::DumpLocal(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp:120:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 120 | columns[0] = '\0'; @@ -3861,8 +3892,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_local.cpp:119:23: note: destination object of size 0 allocated by 'operator new []' 119 | columns = new char[n]; | ^ -[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -MF CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_mesh_vtm.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o -MF CMakeFiles/libliggghts.dir/dump_movie.cpp.o.d -o CMakeFiles/libliggghts.dir/dump_movie.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_movie.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o @@ -3877,6 +3906,13 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/finish.cpp.o -MF CMakeFiles/libliggghts.dir/finish.cpp.o.d -o CMakeFiles/libliggghts.dir/finish.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/finish.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix.cpp.o -MF CMakeFiles/libliggghts.dir/fix.cpp.o.d -o CMakeFiles/libliggghts.dir/fix.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp: In constructor 'LAMMPS_NS::DumpCustom::DumpCustom(LAMMPS_NS::LAMMPS*, int, char**)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:180:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 180 | columns[0] = '\0'; + | ~~~~~~~~~~~^~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp:179:23: note: destination object of size 0 allocated by 'operator new []' + 179 | columns = new char[n]; + | ^ [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_adapt.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -MF CMakeFiles/libliggghts.dir/fix_adapt.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_adapt.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_addforce.cpp.o @@ -3893,12 +3929,12 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -MF CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 520 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 848 | ftruncate(fileno(fp),fileend); @@ -3935,10 +3971,19 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63:9: warning: "BIG" redefined + 63 | #define BIG 1000000. + | ^~~ +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/surface_mesh.h:54, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh.h:47, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh_surface.h:56, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall_gran.h:53, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:52: +/build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60:9: note: this is the location of the previous definition + 60 | #define BIG 1.0e20 + | ^~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:40: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 75 | sprintf(sourceName_, "%sSource",speciesName_); @@ -4035,24 +4080,15 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o +[ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -MF CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o -/build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63:9: warning: "BIG" redefined - 63 | #define BIG 1000000. - | ^~~ -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/surface_mesh.h:54, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/tri_mesh.h:47, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh_surface.h:56, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_wall_gran.h:53, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:52: -/build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60:9: note: this is the location of the previous definition - 60 | #define BIG 1.0e20 - | ^~~ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o -MF CMakeFiles/libliggghts.dir/fix_deform.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -MF CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform_check.cpp @@ -4067,13 +4103,13 @@ [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o -MF CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_enforce2d.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_external.cpp.o -[ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_external.cpp.o -MF CMakeFiles/libliggghts.dir/fix_external.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_external.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_external.cpp +[ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o -MF CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_fiber_spring_simple.cpp +[ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -MF CMakeFiles/libliggghts.dir/fix_gravity.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_freeze.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_freeze.cpp.o -MF CMakeFiles/libliggghts.dir/fix_freeze.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_freeze.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_freeze.cpp -[ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -MF CMakeFiles/libliggghts.dir/fix_gravity.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -MF CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_heat_gran.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o @@ -4084,9 +4120,9 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert_pack.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert_rate_region.cpp +[ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o -MF CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_insert_stream.cpp -[ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o -MF CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_lb_coupling_onetoone.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_lineforce.cpp @@ -4098,9 +4134,9 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o -MF CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_mesh_surface.cpp +[ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_momentum.cpp.o [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_minimize.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_minimize.cpp.o -MF CMakeFiles/libliggghts.dir/fix_minimize.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_minimize.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_minimize.cpp -[ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_momentum.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_momentum.cpp.o -MF CMakeFiles/libliggghts.dir/fix_momentum.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_momentum.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_momentum.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_move.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_move.cpp.o -MF CMakeFiles/libliggghts.dir/fix_move.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_move.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_move.cpp @@ -4108,10 +4144,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_move_mesh.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o -MF CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_multicontact_halfspace.cpp +[ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -MF CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_multisphere_break.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_multisphere.cpp -[ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -MF CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_multisphere_break.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o -MF CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_multisphere_comm.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_neighlist_mesh.cpp.o @@ -4128,22 +4164,22 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_limit.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_line.cpp +[ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_sph.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_noforce.cpp -[ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_sph.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_sph_stationary.cpp +[ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_sphere.cpp -[ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_nve_superquadric.cpp +[ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_print.cpp.o [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -MF CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_particledistribution_discrete.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_print.cpp.o -MF CMakeFiles/libliggghts.dir/fix_print.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_print.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_print.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_planeforce.cpp -[ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_print.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_print.cpp.o -MF CMakeFiles/libliggghts.dir/fix_print.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_print.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_print.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -MF CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_particledistribution_discrete.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -MF CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_property_atom.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o @@ -4168,10 +4204,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_setforce.cpp.o -MF CMakeFiles/libliggghts.dir/fix_setforce.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_setforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_setforce.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_sph.cpp.o -MF CMakeFiles/libliggghts.dir/fix_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph.cpp -[ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -MF CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_density_continuity.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o -MF CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_density_corr.cpp +[ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -MF CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_density_continuity.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o -MF CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o.d -o CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_sph_density_summation.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o @@ -4220,48 +4256,38 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/group.cpp.o -MF CMakeFiles/libliggghts.dir/group.cpp.o.d -o CMakeFiles/libliggghts.dir/group.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/image.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/image.cpp.o -MF CMakeFiles/libliggghts.dir/image.cpp.o.d -o CMakeFiles/libliggghts.dir/image.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/image.cpp +[ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/improper.cpp.o -MF CMakeFiles/libliggghts.dir/improper.cpp.o.d -o CMakeFiles/libliggghts.dir/improper.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/improper.cpp -[ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp +[ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input.cpp.o -MF CMakeFiles/libliggghts.dir/input.cpp.o.d -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/info.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/info.cpp.o -MF CMakeFiles/libliggghts.dir/info.cpp.o.d -o CMakeFiles/libliggghts.dir/info.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input.cpp.o -MF CMakeFiles/libliggghts.dir/input.cpp.o.d -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 349 | if (me == 0) fread(&n,sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 569 | if (me == 0) fread(&ngroup,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp: In member function 'void LAMMPS_NS::Info::command(int, char**)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp:260:18: warning: 'mallinfo mallinfo()' is deprecated [-Wdeprecated-declarations] - 260 | mi = mallinfo(); - | ~~~~~~~~^~ /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:581:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 581 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 585 | if (me == 0) fread(names[i],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp:90: -/usr/include/malloc.h:114:24: note: declared here - 114 | extern struct mallinfo mallinfo (void) __THROW __MALLOC_DEPRECATED; - | ^~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 349 | if (me == 0) fread(&n,sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/input_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -MF CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o.d -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1124 | chdir(arg[1]); @@ -4269,6 +4295,16 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1170 | if (me == 0) system(work); | ~~~~~~^~~~~~ +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/input_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp: In member function 'void LAMMPS_NS::Info::command(int, char**)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp:260:18: warning: 'mallinfo mallinfo()' is deprecated [-Wdeprecated-declarations] + 260 | mi = mallinfo(); + | ~~~~~~~~^~ +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp:90: +/usr/include/malloc.h:114:24: note: declared here + 114 | extern struct mallinfo mallinfo (void) __THROW __MALLOC_DEPRECATED; + | ^~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/integrate.cpp.o -MF CMakeFiles/libliggghts.dir/integrate.cpp.o.d -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o @@ -4293,16 +4329,16 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/memory.cpp.o -MF CMakeFiles/libliggghts.dir/memory.cpp.o.d -o CMakeFiles/libliggghts.dir/memory.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/memory.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module.cpp -[ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_liquidtransfer.cpp +[ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_mover_linear.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_mover_rotation.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -MF CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o.d -o CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/mesh_mover_linear.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/min.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/min.cpp.o -MF CMakeFiles/libliggghts.dir/min.cpp.o.d -o CMakeFiles/libliggghts.dir/min.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/min.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_cg.cpp.o @@ -4345,10 +4381,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_full.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp -[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp -[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1197 | if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); @@ -4389,6 +4421,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1264 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp +[ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o @@ -4397,33 +4433,22 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_request.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_request.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_request.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_respa.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_respa.cpp -[ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neighbor.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neighbor.cpp.o -MF CMakeFiles/libliggghts.dir/neighbor.cpp.o.d -o CMakeFiles/libliggghts.dir/neighbor.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neighbor.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o -MF CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o.d -o CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_stencil.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/output.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/output.cpp.o -MF CMakeFiles/libliggghts.dir/output.cpp.o.d -o CMakeFiles/libliggghts.dir/output.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/output.cpp +[ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neighbor.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/neighbor.cpp.o -MF CMakeFiles/libliggghts.dir/neighbor.cpp.o.d -o CMakeFiles/libliggghts.dir/neighbor.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neighbor.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair.cpp.o -MF CMakeFiles/libliggghts.dir/pair.cpp.o.d -o CMakeFiles/libliggghts.dir/pair.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o -MF CMakeFiles/libliggghts.dir/pair_gran.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -MF CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp -In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, - from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] - 80 | posix_memalign(&ptr, alignment, sizeof(T)); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': -/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -MF CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp -[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -MF CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_line_lj.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 660 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -4434,14 +4459,25 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 677 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/granular_styles.h:81, + from /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp:87: +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] + 80 | posix_memalign(&ptr, alignment, sizeof(T)); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': +/build/reproducible-path/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] +[ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -MF CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_line_lj.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o -MF CMakeFiles/libliggghts.dir/pair_soft.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 763 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -MF CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o.d -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': @@ -4461,16 +4497,20 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | fread(&mix_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fread(&selected, sizeof(int64_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -MF CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o.d -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/procmap.cpp.o -MF CMakeFiles/libliggghts.dir/procmap.cpp.o.d -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/properties.cpp.o -MF CMakeFiles/libliggghts.dir/properties.cpp.o.d -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 300 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -4482,10 +4522,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 323 | fread(&tensCorr_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/procmap.cpp.o -MF CMakeFiles/libliggghts.dir/procmap.cpp.o.d -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/properties.cpp.o -MF CMakeFiles/libliggghts.dir/properties.cpp.o.d -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/property_registry.cpp.o -MF CMakeFiles/libliggghts.dir/property_registry.cpp.o.d -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o @@ -4514,6 +4550,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_cone.cpp.o -MF CMakeFiles/libliggghts.dir/region_cone.cpp.o.d -o CMakeFiles/libliggghts.dir/region_cone.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_cone.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cylinder.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_cylinder.cpp.o -MF CMakeFiles/libliggghts.dir/region_cylinder.cpp.o.d -o CMakeFiles/libliggghts.dir/region_cylinder.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_cylinder.cpp +[ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o -MF CMakeFiles/libliggghts.dir/region_intersect.cpp.o.d -o CMakeFiles/libliggghts.dir/region_intersect.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_intersect.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_int(int*, int, FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:863:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 863 | fread(buf,sizeof(int),n,fp); @@ -4545,8 +4583,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:948:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 948 | fread(&value,sizeof(bigint),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o -MF CMakeFiles/libliggghts.dir/region_intersect.cpp.o.d -o CMakeFiles/libliggghts.dir/region_intersect.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_intersect.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o -MF CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o.d -o CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_mesh_tet.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o @@ -4556,14 +4592,14 @@ [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_prism.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_prism.cpp.o -MF CMakeFiles/libliggghts.dir/region_prism.cpp.o.d -o CMakeFiles/libliggghts.dir/region_prism.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_prism.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/region_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/region_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_sphere.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_union.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_union.cpp.o -MF CMakeFiles/libliggghts.dir/region_union.cpp.o.d -o CMakeFiles/libliggghts.dir/region_union.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_union.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o -MF CMakeFiles/libliggghts.dir/region_sphere.cpp.o.d -o CMakeFiles/libliggghts.dir/region_sphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_sphere.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_wedge.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/region_wedge.cpp.o -MF CMakeFiles/libliggghts.dir/region_wedge.cpp.o.d -o CMakeFiles/libliggghts.dir/region_wedge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_wedge.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/replicate.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/replicate.cpp.o -MF CMakeFiles/libliggghts.dir/replicate.cpp.o.d -o CMakeFiles/libliggghts.dir/replicate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/replicate.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/respa.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/replicate.cpp.o -MF CMakeFiles/libliggghts.dir/replicate.cpp.o.d -o CMakeFiles/libliggghts.dir/replicate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/replicate.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/respa.cpp.o -MF CMakeFiles/libliggghts.dir/respa.cpp.o.d -o CMakeFiles/libliggghts.dir/respa.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/respa.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/rotate.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/rotate.cpp.o -MF CMakeFiles/libliggghts.dir/rotate.cpp.o.d -o CMakeFiles/libliggghts.dir/rotate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/rotate.cpp @@ -4578,11 +4614,7 @@ [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/sort_buffer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/sort_buffer.cpp.o -MF CMakeFiles/libliggghts.dir/sort_buffer.cpp.o.d -o CMakeFiles/libliggghts.dir/sort_buffer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/sort_buffer.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/special.cpp.o -MF CMakeFiles/libliggghts.dir/special.cpp.o.d -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/special.cpp -[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/tet_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tet_mesh.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::int_handler(int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:65:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | write(STDOUT_FILENO, warning.c_str(), len); @@ -4597,6 +4629,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 108 | write(STDOUT_FILENO, warning.c_str(), len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/superquadric.cpp.o -MF CMakeFiles/libliggghts.dir/superquadric.cpp.o.d -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp +[ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -MF CMakeFiles/libliggghts.dir/tet_mesh.cpp.o.d -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/tet_mesh.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/thermo.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DOMPI_SKIP_MPICXX -D_MPICC_H -Dkiss_fft_scalar=double -Dlibliggghts_EXPORTS -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/vtk-9.3 -g -O2 -ffile-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -MD -MT src/CMakeFiles/libliggghts.dir/thermo.cpp.o -MF CMakeFiles/libliggghts.dir/thermo.cpp.o.d -o CMakeFiles/libliggghts.dir/thermo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/thermo.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/timer.cpp.o @@ -4659,18 +4695,54 @@ pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Mon Dec 16 12:13:53 2024 +Setting up run at Mon Jan 19 20:59:15 2026 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps Memory usage per processor = 4.26517 Mbytes Step Atoms KinEng rke heattran Volume 0 0 0 0 0 0.0015 -insertion: proc 7 at 0 % -insertion: proc 7 at 10 % -insertion: proc 7 at 20 % -insertion: proc 7 at 30 % -insertion: proc 7 at 40 % +insertion: proc 0 at 0 % +insertion: proc 4 at 0 % +insertion: proc 4 at 10 % +insertion: proc 4 at 20 % +insertion: proc 4 at 30 % +insertion: proc 4 at 40 % +insertion: proc 4 at 50 % +insertion: proc 4 at 60 % +insertion: proc 4 at 70 % +insertion: proc 10 at 0 % +insertion: proc 10 at 10 % +insertion: proc 10 at 20 % +insertion: proc 10 at 30 % +insertion: proc 10 at 40 % +insertion: proc 10 at 50 % +insertion: proc 10 at 60 % +insertion: proc 10 at 70 % +insertion: proc 10 at 80 % +insertion: proc 10 at 90 % +insertion: proc 10 at 100 % +insertion: proc 3 at 0 % +insertion: proc 3 at 10 % +insertion: proc 3 at 20 % +insertion: proc 3 at 30 % +insertion: proc 3 at 40 % +insertion: proc 3 at 50 % +insertion: proc 3 at 60 % +insertion: proc 3 at 70 % +insertion: proc 3 at 80 % +insertion: proc 3 at 90 % +insertion: proc 2 at 0 % +insertion: proc 2 at 10 % +insertion: proc 2 at 20 % +insertion: proc 2 at 30 % +insertion: proc 2 at 40 % +insertion: proc 2 at 50 % +insertion: proc 2 at 60 % +insertion: proc 2 at 70 % +insertion: proc 2 at 80 % +insertion: proc 2 at 90 % +insertion: proc 2 at 100 % insertion: proc 6 at 0 % insertion: proc 6 at 10 % insertion: proc 6 at 20 % @@ -4678,130 +4750,94 @@ insertion: proc 6 at 40 % insertion: proc 6 at 50 % insertion: proc 6 at 60 % +insertion: proc 6 at 70 % +insertion: proc 6 at 80 % +insertion: proc 6 at 90 % +insertion: proc 1 at 0 % +insertion: proc 1 at 10 % +insertion: proc 1 at 20 % +insertion: proc 1 at 30 % +insertion: proc 1 at 40 % +insertion: proc 1 at 50 % +insertion: proc 1 at 60 % +insertion: proc 1 at 70 % +insertion: proc 1 at 80 % +insertion: proc 7 at 0 % +insertion: proc 7 at 10 % +insertion: proc 7 at 20 % +insertion: proc 7 at 30 % +insertion: proc 7 at 40 % insertion: proc 7 at 50 % insertion: proc 7 at 60 % -insertion: proc 6 at 70 % insertion: proc 7 at 70 % insertion: proc 7 at 80 % -insertion: proc 6 at 80 % insertion: proc 7 at 90 % insertion: proc 7 at 100 % -insertion: proc 6 at 90 % -insertion: proc 0 at 0 % +insertion: proc 5 at 0 % +insertion: proc 5 at 10 % +insertion: proc 5 at 20 % +insertion: proc 5 at 30 % +insertion: proc 5 at 40 % +insertion: proc 5 at 50 % +insertion: proc 5 at 60 % +insertion: proc 5 at 70 % +insertion: proc 5 at 80 % +insertion: proc 5 at 90 % +insertion: proc 8 at 0 % +insertion: proc 8 at 10 % +insertion: proc 8 at 20 % +insertion: proc 8 at 30 % +insertion: proc 8 at 40 % +insertion: proc 8 at 50 % +insertion: proc 8 at 60 % +insertion: proc 8 at 70 % +insertion: proc 8 at 80 % +insertion: proc 8 at 90 % +insertion: proc 9 at 0 % +insertion: proc 9 at 10 % +insertion: proc 9 at 20 % +insertion: proc 9 at 30 % +insertion: proc 9 at 40 % +insertion: proc 9 at 50 % +insertion: proc 9 at 60 % +insertion: proc 9 at 70 % +insertion: proc 9 at 80 % +insertion: proc 9 at 90 % insertion: proc 11 at 0 % insertion: proc 11 at 10 % insertion: proc 11 at 20 % insertion: proc 11 at 30 % -insertion: proc 1 at 0 % -insertion: proc 1 at 10 % -insertion: proc 1 at 20 % insertion: proc 11 at 40 % insertion: proc 11 at 50 % insertion: proc 11 at 60 % +insertion: proc 11 at 70 % +insertion: proc 11 at 80 % +insertion: proc 11 at 90 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % insertion: proc 0 at 30 % insertion: proc 0 at 40 % -insertion: proc 11 at 70 % -insertion: proc 1 at 30 % -insertion: proc 1 at 40 % insertion: proc 0 at 50 % insertion: proc 0 at 60 % -insertion: proc 11 at 80 % -insertion: proc 1 at 50 % -insertion: proc 1 at 60 % insertion: proc 0 at 70 % -insertion: proc 11 at 90 % -insertion: proc 1 at 70 % insertion: proc 0 at 80 % insertion: proc 0 at 90 % -insertion: proc 1 at 80 % insertion: proc 0 at 100 % -insertion: proc 9 at 0 % -insertion: proc 9 at 10 % -insertion: proc 9 at 20 % -insertion: proc 9 at 30 % -insertion: proc 3 at 0 % -insertion: proc 3 at 10 % -insertion: proc 3 at 20 % -insertion: proc 3 at 30 % -insertion: proc 10 at 0 % -insertion: proc 10 at 10 % -insertion: proc 10 at 20 % -insertion: proc 10 at 30 % -insertion: proc 9 at 40 % -insertion: proc 9 at 50 % -insertion: proc 9 at 60 % -insertion: proc 10 at 40 % -insertion: proc 10 at 50 % -insertion: proc 9 at 70 % -insertion: proc 3 at 40 % -insertion: proc 9 at 80 % -insertion: proc 3 at 50 % -insertion: proc 10 at 60 % -insertion: proc 3 at 60 % -insertion: proc 10 at 70 % -insertion: proc 9 at 90 % -insertion: proc 3 at 70 % -insertion: proc 10 at 80 % -insertion: proc 3 at 80 % -insertion: proc 10 at 90 % -insertion: proc 3 at 90 % -insertion: proc 10 at 100 % -insertion: proc 5 at 0 % -insertion: proc 8 at 0 % -insertion: proc 2 at 0 % -insertion: proc 8 at 10 % -insertion: proc 8 at 20 % -insertion: proc 8 at 30 % -insertion: proc 8 at 40 % -insertion: proc 8 at 50 % -insertion: proc 4 at 0 % -insertion: proc 4 at 10 % -insertion: proc 4 at 20 % -insertion: proc 4 at 30 % -insertion: proc 4 at 40 % -insertion: proc 5 at 10 % -insertion: proc 5 at 20 % -insertion: proc 5 at 30 % -insertion: proc 8 at 60 % -insertion: proc 4 at 50 % -insertion: proc 4 at 60 % -insertion: proc 4 at 70 % insertion: proc 4 at 80 % insertion: proc 4 at 90 % insertion: proc 4 at 100 % -insertion: proc 5 at 40 % -insertion: proc 5 at 50 % -insertion: proc 5 at 60 % -insertion: proc 5 at 70 % -insertion: proc 5 at 80 % -insertion: proc 5 at 90 % -insertion: proc 8 at 70 % -insertion: proc 8 at 80 % -insertion: proc 8 at 90 % -insertion: proc 2 at 10 % -insertion: proc 2 at 20 % -insertion: proc 2 at 30 % -insertion: proc 2 at 40 % -insertion: proc 2 at 50 % -insertion: proc 2 at 60 % -insertion: proc 2 at 70 % -insertion: proc 2 at 80 % -insertion: proc 2 at 90 % -insertion: proc 2 at 100 % INFO: Particle insertion ins: inserted 830 particle templates (mass 1.780068e+00) at step 1 - a total of 830 particle templates (mass 1.780068e+00) inserted so far. WARNING: Particle insertion: Less insertions than requested (./src/fix_insert.cpp:814) 1 830 0.08016857 0 5340.2049 0.0015 -Loop time of 0.367225 on 12 procs for 1 steps with 830 atoms, finish time Mon Dec 16 12:13:54 2024 +Loop time of 0.0226887 on 12 procs for 1 steps with 830 atoms, finish time Mon Jan 19 20:59:15 2026 -Pair time (%) = 8.79508e-06 (0.00239501) -Neigh time (%) = 0.000106153 (0.0289068) -Comm time (%) = 0.121524 (33.0924) -Outpt time (%) = 0.0479794 (13.0654) -Other time (%) = 0.197607 (53.8109) +Pair time (%) = 6.05208e-06 (0.0266744) +Neigh time (%) = 0.000180346 (0.79487) +Comm time (%) = 0.000450348 (1.9849) +Outpt time (%) = 3.32314e-05 (0.146467) +Other time (%) = 0.0220187 (97.0471) Nlocal: 69.1667 ave 72 max 64 min Histogram: 1 0 0 0 0 4 1 3 1 2 @@ -4814,7 +4850,7 @@ Ave neighs/atom = 1.56867 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Mon Dec 16 12:13:54 2024 +Setting up run at Mon Jan 19 20:59:15 2026 Memory usage per processor = 8.39231 Mbytes Step Atoms KinEng rke heattran Volume @@ -4839,14 +4875,14 @@ 18000 830 8.8719299e-07 5.4125575e-07 5340.2049 0.0015 19000 830 1.6432873e-06 9.6651814e-07 5340.2049 0.0015 20000 830 6.4668494e-06 2.1239233e-06 5340.2049 0.0015 -Loop time of 586.72 on 12 procs for 19999 steps with 830 atoms, finish time Mon Dec 16 12:23:41 2024 +Loop time of 9.58784 on 12 procs for 19999 steps with 830 atoms, finish time Mon Jan 19 20:59:25 2026 -Pair time (%) = 0.432463 (0.0737086) -Neigh time (%) = 0.010126 (0.00172587) -Comm time (%) = 371.589 (63.3333) -Outpt time (%) = 1.07984 (0.184047) -Other time (%) = 213.608 (36.4072) +Pair time (%) = 0.421862 (4.39997) +Neigh time (%) = 0.0099056 (0.103314) +Comm time (%) = 4.98974 (52.0424) +Outpt time (%) = 0.280312 (2.92362) +Other time (%) = 3.88602 (40.5307) Nlocal: 69.1667 ave 214 max 0 min Histogram: 8 0 0 0 0 0 0 0 0 4 @@ -4861,7 +4897,7 @@ Dangerous builds = 0 Setting atom values ... 413 settings made for property/atom -Setting up run at Mon Dec 16 12:23:41 2024 +Setting up run at Mon Jan 19 20:59:25 2026 Memory usage per processor = 8.58177 Mbytes Step Atoms KinEng rke heattran Volume @@ -4896,14 +4932,14 @@ 48000 830 2.7342889e-10 3.7990433e-10 9768.929 0.0015 49000 830 2.7310326e-10 3.7996539e-10 9768.929 0.0015 50000 830 2.0794429e-10 2.7558348e-10 9768.929 0.0015 -Loop time of 105.135 on 12 procs for 30000 steps with 830 atoms, finish time Mon Dec 16 12:25:27 2024 +Loop time of 13.2093 on 12 procs for 30000 steps with 830 atoms, finish time Mon Jan 19 20:59:38 2026 -Pair time (%) = 0.67096 (0.63819) -Neigh time (%) = 0.000481684 (0.000458158) -Comm time (%) = 56.0125 (53.2768) -Outpt time (%) = 0.36288 (0.345157) -Other time (%) = 48.088 (45.7394) +Pair time (%) = 0.751065 (5.68589) +Neigh time (%) = 0.000530755 (0.00401805) +Comm time (%) = 6.11861 (46.3205) +Outpt time (%) = 0.120792 (0.914446) +Other time (%) = 6.21829 (47.0751) Nlocal: 69.1667 ave 214 max 0 min Histogram: 8 0 0 0 0 0 0 0 0 4 @@ -4927,7 +4963,7 @@ pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Mon Dec 16 12:25:27 2024 +Setting up run at Mon Jan 19 20:59:39 2026 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -4947,14 +4983,14 @@ INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 -Loop time of 0.00978073 on 1 procs for 1 steps with 890 atoms, finish time Mon Dec 16 12:25:27 2024 +Loop time of 0.0124232 on 1 procs for 1 steps with 890 atoms, finish time Mon Jan 19 20:59:39 2026 -Pair time (%) = 2.3164e-05 (0.236833) -Neigh time (%) = 0.000448017 (4.58061) -Comm time (%) = 8.152e-06 (0.0833476) -Outpt time (%) = 1.6565e-05 (0.169364) -Other time (%) = 0.00928483 (94.9298) +Pair time (%) = 2.7973e-05 (0.225168) +Neigh time (%) = 0.000529012 (4.25826) +Comm time (%) = 5.772e-06 (0.0464615) +Outpt time (%) = 2.0939e-05 (0.168548) +Other time (%) = 0.0118395 (95.3016) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4967,7 +5003,7 @@ Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Mon Dec 16 12:25:27 2024 +Setting up run at Mon Jan 19 20:59:39 2026 Memory usage per processor = 8.46413 Mbytes Step Atoms KinEng rke heattran Volume @@ -4992,14 +5028,14 @@ 18000 890 1.4676598e-05 7.0850812e-06 5726.2438 0.0015 19000 890 3.7770954e-06 4.6853468e-06 5726.2438 0.0015 20000 890 5.3031725e-07 1.3357401e-06 5726.2438 0.0015 -Loop time of 5.65665 on 1 procs for 19999 steps with 890 atoms, finish time Mon Dec 16 12:25:33 2024 +Loop time of 7.52225 on 1 procs for 19999 steps with 890 atoms, finish time Mon Jan 19 20:59:46 2026 -Pair time (%) = 3.80704 (67.3021) -Neigh time (%) = 0.0886718 (1.56757) -Comm time (%) = 0.00656358 (0.116033) -Outpt time (%) = 0.0993171 (1.75576) -Other time (%) = 1.65506 (29.2586) +Pair time (%) = 5.04379 (67.0516) +Neigh time (%) = 0.103789 (1.37976) +Comm time (%) = 0.00824083 (0.109553) +Outpt time (%) = 0.134725 (1.79102) +Other time (%) = 2.23171 (29.6681) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -5014,7 +5050,7 @@ Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom -Setting up run at Mon Dec 16 12:25:33 2024 +Setting up run at Mon Jan 19 20:59:46 2026 Memory usage per processor = 8.75284 Mbytes Step Atoms KinEng rke heattran Volume @@ -5049,14 +5085,14 @@ 48000 890 9.0915381e-09 2.6785102e-08 10498.114 0.0015 49000 890 8.3490816e-10 2.0441102e-08 10498.114 0.0015 50000 890 5.7112432e-09 2.069405e-08 10498.114 0.0015 -Loop time of 10.0671 on 1 procs for 30000 steps with 890 atoms, finish time Mon Dec 16 12:25:43 2024 +Loop time of 11.6009 on 1 procs for 30000 steps with 890 atoms, finish time Mon Jan 19 20:59:58 2026 -Pair time (%) = 7.01862 (69.7181) -Neigh time (%) = 0.000565232 (0.00561462) -Comm time (%) = 0.00667939 (0.0663485) -Outpt time (%) = 0.148498 (1.47507) -Other time (%) = 2.89278 (28.7349) +Pair time (%) = 8.07206 (69.5812) +Neigh time (%) = 0.000541435 (0.00466717) +Comm time (%) = 0.00694948 (0.0599046) +Outpt time (%) = 0.1919 (1.65418) +Other time (%) = 3.32947 (28.7) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -5559,22 +5595,22 @@ dh_strip -a -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_makeshlibs -a -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_shlibdeps -a -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-shlibdeps: warning: symbol _ZN17vtkPolyDataWriter3NewEv used by debian/libliggghts3t64/usr/lib/x86_64-linux-gnu/libliggghts.so.3.8.0 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN9vtkWriter12SetInputDataEP13vtkDataObject used by debian/libliggghts3t64/usr/lib/x86_64-linux-gnu/libliggghts.so.3.8.0 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN25vtkUnstructuredGridWriter3NewEv used by debian/libliggghts3t64/usr/lib/x86_64-linux-gnu/libliggghts.so.3.8.0 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN24vtkRectilinearGridWriter3NewEv used by debian/libliggghts3t64/usr/lib/x86_64-linux-gnu/libliggghts.so.3.8.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN17vtkPolyDataWriter3NewEv used by debian/libliggghts3t64/usr/lib/x86_64-linux-gnu/libliggghts.so.3.8.0 found in none of the libraries dh_installdeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_gencontrol -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-gencontrol: warning: Depends field of package liggghts-doc: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined +dpkg-gencontrol: warning: Depends field of package liggghts-doc: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_builddeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-12_amd64.deb'. +dpkg-deb: building package 'libliggghts3t64' in '../libliggghts3t64_3.8.0+repack1-12_amd64.deb'. dpkg-deb: building package 'libliggghts3t64-dbgsym' in '../libliggghts3t64-dbgsym_3.8.0+repack1-12_amd64.deb'. +dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-12_amd64.deb'. dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-12_amd64.deb'. -dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-12_amd64.deb'. -dpkg-deb: building package 'libliggghts3t64' in '../libliggghts3t64_3.8.0+repack1-12_amd64.deb'. dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-12_all.deb'. +dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-12_amd64.deb'. dpkg-genbuildinfo --build=binary -O../liggghts_3.8.0+repack1-12_amd64.buildinfo dpkg-genchanges --build=binary -O../liggghts_3.8.0+repack1-12_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -5582,12 +5618,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3227450/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/753271 and its subdirectories -I: Current time: Mon Dec 16 12:26:04 -12 2024 -I: pbuilder-time-stamp: 1734395164 +I: removing directory /srv/workspace/pbuilder/3227450 and its subdirectories +I: Current time: Mon Jan 19 21:00:33 +14 2026 +I: pbuilder-time-stamp: 1768806033