Diff of the two buildlogs: -- --- b1/build.log 2024-12-04 14:50:47.456888138 +0000 +++ b2/build.log 2024-12-04 04:27:14.657683250 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Dec 3 16:27:18 -12 2024 -I: pbuilder-time-stamp: 1733286438 +I: Current time: Tue Jan 6 22:50:20 +14 2026 +I: pbuilder-time-stamp: 1767689420 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -42,52 +42,84 @@ dpkg-source: info: applying unpin_cffi.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/647716/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 6 08:50 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='0259590c0ce945699a44ceed133519b3' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='647716' - PS1='# ' - PS2='> ' + INVOCATION_ID=f37551980d6a4d53ab89f1bac1b3e66c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2224071 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XJiscdJa/pbuilderrc_Xaec --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XJiscdJa/b1 --logfile b1/build.log fenics-dolfinx_0.9.0-5.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XJiscdJa/pbuilderrc_XBGg --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XJiscdJa/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-5.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/647716/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -800,7 +832,7 @@ Get: 547 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.2+dfsg-1 [29.5 kB] Get: 548 http://deb.debian.org/debian unstable/main amd64 python3-wheel-whl all 0.45.1-1 [75.3 kB] Get: 549 http://deb.debian.org/debian unstable/main amd64 python3-virtualenv all 20.28.0+ds-1 [71.3 kB] -Fetched 473 MB in 21s (23.0 MB/s) +Fetched 473 MB in 6s (75.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19968 files and directories currently installed.) @@ -2546,8 +2578,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Dec 4 04:32:42 UTC 2024. -Universal Time is now: Wed Dec 4 04:32:42 UTC 2024. +Local time is now: Tue Jan 6 08:51:52 UTC 2026. +Universal Time is now: Tue Jan 6 08:51:52 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-3.2+b2) ... @@ -3088,7 +3120,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-5_source.changes +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-5_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-5 dpkg-buildpackage: info: source distribution unstable @@ -3234,8 +3270,8 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (33.1s) --- Generating done (0.2s) +-- Configuring done (5.8s) +-- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -3369,8 +3405,8 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (29.3s) --- Generating done (0.2s) +-- Configuring done (10.1s) +-- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -3390,7 +3426,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real - cd obj-x86_64-linux-gnu-real && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-real && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks @@ -3402,90 +3438,90 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' -[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o +[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o +[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o +[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o +[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o +[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-5\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp -[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp -[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp +[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp -[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp +[ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o +[ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o +[ 32%] 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dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 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-DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp [ 67%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o +[ 67%] Building CXX object 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -MF CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o.d -o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB 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Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o +[ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp +[ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp [100%] Linking CXX shared library libdolfinx_real.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -fpermissive -O2 -g -DNDEBUG -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file,CMakeFiles/dolfinx.dir/link.d -Wl,-z,relro 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CMakeFiles/dolfinx.dir/graph/partition.cpp.o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o CMakeFiles/dolfinx.dir/io/cells.cpp.o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o CMakeFiles/dolfinx.dir/la/petsc.cpp.o CMakeFiles/dolfinx.dir/la/slepc.cpp.o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so @@ -3496,7 +3532,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex - cd obj-x86_64-linux-gnu-complex && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-complex && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex//CMakeFiles/progress.marks @@ -3508,87 +3544,87 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' -[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-5\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp -[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o +[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o +[ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o +[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o +[ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-5\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && 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-DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o -MF CMakeFiles/dolfinx.dir/fem/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.cpp -[ 44%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -[ 46%] Building CXX object 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp -[ 48%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o +[ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o +[ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o +[ 60%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o +[ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o +[ 65%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp -[ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp -[ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp -[ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o -MF CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o.d -o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp -[ 60%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB 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dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD 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dolfinx/CMakeFiles/dolfinx.dir/la/petsc.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp [ 76%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/slepc.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/la/slepc.cpp.o -MF CMakeFiles/dolfinx.dir/la/slepc.cpp.o.d -o CMakeFiles/dolfinx.dir/la/slepc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp [ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp [ 81%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o +[ 83%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp -[ 83%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp [ 88%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o cd 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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-D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp @@ -3613,7 +3649,7 @@ debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --destdir=debian/tmp-real - cd obj-x86_64-linux-gnu-real && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-real && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -3752,7 +3788,7 @@ * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.1 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmpvrk7rcj3/build/CMakeInit.txt +loading initial cache file /tmp/tmpyx58wi36/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -3807,24 +3843,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (15.5s) +-- Configuring done (4.0s) -- Generating done (0.0s) --- Build files have been written to: /tmp/tmpvrk7rcj3/build +-- Build files have been written to: /tmp/tmpyx58wi36/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmpvrk7rcj3/build' +Change Dir: '/tmp/tmpyx58wi36/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmpvrk7rcj3/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpvrk7rcj3/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmpvrk7rcj3/build/CMakeFiles 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-DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.13 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 54%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -3885,16 +3921,16 @@ [100%] Linking CXX shared module cpp.cpython-313-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem 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/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so -gmake[4]: Leaving directory '/tmp/tmpvrk7rcj3/build' +gmake[4]: Leaving directory '/tmp/tmpyx58wi36/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmpvrk7rcj3/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmpvrk7rcj3/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmpvrk7rcj3/build' +gmake[3]: Leaving directory '/tmp/tmpyx58wi36/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmpyx58wi36/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmpyx58wi36/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmpvrk7rcj3/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmpvrk7rcj3/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" +-- Installing: /tmp/tmpyx58wi36/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmpyx58wi36/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl @@ -4029,33 +4065,33 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -68.66s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -53.64s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] -36.60s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -36.31s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] -30.40s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -23.56s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -23.32s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-NCE] -23.02s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -22.98s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] -22.68s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] -21.40s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] -19.99s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float32] -19.36s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] -19.04s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -18.79s call test/unit/fem/test_fem_pipeline.py::test_P_simplex_built_in[float32-4-Lagrange-CellType.tetrahedron] -17.52s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float64] -17.44s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAF] -17.03s call test/unit/fem/test_dof_permuting.py::test_integral[2-tetrahedron-N1curl] -16.88s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -16.74s call test/unit/fem/test_interpolation.py::test_interpolation_non_affine_nonmatching_maps -= 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 6290.40s (1:44:50) = +13.92s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +12.63s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +9.69s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +4.76s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.68s call test/unit/fem/test_element_integrals.py::test_facet_integral[float64-CellType.hexahedron] +4.32s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +4.28s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-1-4] +4.16s call test/unit/fem/test_assemble_domains.py::test_assembly_dx_domains[meshtags-GhostMode.none] +3.87s call test/unit/fem/test_dof_permuting.py::test_integral[3-tetrahedron-N2curl] +3.86s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +3.57s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +3.56s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] +3.49s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +3.47s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +3.34s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Discontinuous Lagrange-1-4] +3.31s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +3.28s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.18s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Lagrange-3-4] +3.04s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +3.00s call test/unit/fem/test_fem_pipeline.py::test_P_tp[4-Q-CellType.hexahedron] += 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 1008.55s (0:16:48) = I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.1 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmp8j1tb8yz/build/CMakeInit.txt +loading initial cache file /tmp/tmp6ufu64nc/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -4110,24 +4146,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (28.6s) --- Generating done (0.2s) --- Build files have been written to: /tmp/tmp8j1tb8yz/build +-- Configuring done (2.4s) +-- Generating done (0.0s) +-- Build files have been written to: /tmp/tmp6ufu64nc/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmp8j1tb8yz/build' +Change Dir: '/tmp/tmp6ufu64nc/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmp8j1tb8yz/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp8j1tb8yz/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E 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/tmp/tmp8j1tb8yz/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp8j1tb8yz/build' +gmake[4]: Entering directory '/tmp/tmp6ufu64nc/build' +cd /tmp/tmp6ufu64nc/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp6ufu64nc/build /tmp/tmp6ufu64nc/build /tmp/tmp6ufu64nc/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp6ufu64nc/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmp8j1tb8yz/build' +gmake[4]: Entering directory '/tmp/tmp6ufu64nc/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4153,14 +4189,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" 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-Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 54%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4188,16 +4224,16 @@ [100%] Linking CXX shared module cpp.cpython-312-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem 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-Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib/libpetsc_real.so -gmake[4]: Leaving directory '/tmp/tmp8j1tb8yz/build' +gmake[4]: Leaving directory '/tmp/tmp6ufu64nc/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmp8j1tb8yz/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmp8j1tb8yz/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmp8j1tb8yz/build' +gmake[3]: Leaving directory '/tmp/tmp6ufu64nc/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp6ufu64nc/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp6ufu64nc/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmp8j1tb8yz/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmp8j1tb8yz/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" +-- Installing: /tmp/tmp6ufu64nc/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp6ufu64nc/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-real/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl @@ -4332,29 +4368,29 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -59.30s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -57.80s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -47.40s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -36.83s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -35.17s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] -33.14s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] -30.76s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[2-DG-CellType.tetrahedron] -30.02s call test/unit/fem/test_fem_pipeline.py::test_P_tp[4-Q-CellType.hexahedron] -29.53s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -29.41s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -28.80s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-BDM-CellType.tetrahedron] -28.80s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -27.50s call test/unit/fem/test_fem_pipeline.py::test_vector_P_tp[3-Q-CellType.hexahedron] -25.50s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[Regge-float32] -23.25s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] -23.02s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float32] -22.34s call test/unit/fem/test_fem_pipeline.py::test_dP_quad[3-DQ-CellType.quadrilateral] -21.51s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-N2curl-CellType.tetrahedron] -20.92s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_matrix_assembly_block_nl -20.40s call test/unit/fem/test_fem_pipeline.py::test_AA_hex[3-AAE-CellType.hexahedron] -= 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 9007.05s (2:30:07) = +13.89s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +13.16s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +9.75s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +5.76s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +5.53s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Discontinuous Lagrange-3-4] +5.19s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.68s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +4.45s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +4.32s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +4.03s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh0] +3.86s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +3.54s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +3.49s call test/unit/fem/test_element_integrals.py::test_facet_integral[float64-CellType.hexahedron] +3.45s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.31s call test/unit/fem/test_assemble_domains.py::test_assembly_ds_domains[GhostMode.none] +3.29s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +3.22s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] +3.17s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +3.16s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] +3.10s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] += 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 989.25s (0:16:29) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex - cd obj-x86_64-linux-gnu-complex && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4493,7 +4529,7 @@ * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.1 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmp3ycnjsft/build/CMakeInit.txt +loading initial cache file /tmp/tmp1m8m322t/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -4548,24 +4584,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (23.8s) --- Generating done (0.1s) --- Build files have been written to: /tmp/tmp3ycnjsft/build +-- Configuring done (2.6s) +-- Generating done (0.0s) +-- Build files have been written to: /tmp/tmp1m8m322t/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmp3ycnjsft/build' +Change Dir: '/tmp/tmp1m8m322t/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmp3ycnjsft/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp3ycnjsft/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmp3ycnjsft/build/CMakeFiles /tmp/tmp3ycnjsft/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmp1m8m322t/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp1m8m322t/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmp1m8m322t/build/CMakeFiles /tmp/tmp1m8m322t/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmp3ycnjsft/build' +gmake[3]: Entering directory '/tmp/tmp1m8m322t/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmp3ycnjsft/build' -cd /tmp/tmp3ycnjsft/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp3ycnjsft/build /tmp/tmp3ycnjsft/build /tmp/tmp3ycnjsft/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp3ycnjsft/build' +gmake[4]: Entering directory '/tmp/tmp1m8m322t/build' +cd /tmp/tmp1m8m322t/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp1m8m322t/build /tmp/tmp1m8m322t/build /tmp/tmp1m8m322t/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp1m8m322t/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmp3ycnjsft/build' +gmake[4]: Entering directory '/tmp/tmp1m8m322t/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.13 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4591,14 +4627,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmp3ycnjsft/build' +gmake[4]: Leaving directory '/tmp/tmp1m8m322t/build' [ 45%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmp3ycnjsft/build' -cd /tmp/tmp3ycnjsft/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp3ycnjsft/build /tmp/tmp3ycnjsft/build /tmp/tmp3ycnjsft/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp3ycnjsft/build' +gmake[4]: Entering directory '/tmp/tmp1m8m322t/build' +cd /tmp/tmp1m8m322t/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp1m8m322t/build /tmp/tmp1m8m322t/build /tmp/tmp1m8m322t/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp1m8m322t/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmp3ycnjsft/build' +gmake[4]: Entering directory '/tmp/tmp1m8m322t/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.13 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 54%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4626,16 +4662,16 @@ [100%] Linking CXX shared module cpp.cpython-313-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file,CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-313-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so -gmake[4]: Leaving directory '/tmp/tmp3ycnjsft/build' +gmake[4]: Leaving directory '/tmp/tmp1m8m322t/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmp3ycnjsft/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmp3ycnjsft/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmp3ycnjsft/build' +gmake[3]: Leaving directory '/tmp/tmp1m8m322t/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp1m8m322t/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp1m8m322t/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmp3ycnjsft/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmp3ycnjsft/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" +-- Installing: /tmp/tmp1m8m322t/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp1m8m322t/wheel/platlib/dolfinx/cpp.cpython-313-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp313-cp313-linux_x86_64.whl @@ -4774,33 +4810,33 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -72.20s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -63.25s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -44.27s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -41.53s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -34.18s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -29.81s call test/unit/fem/test_fem_pipeline.py::test_dP_quad[2-DQ-CellType.quadrilateral] -29.46s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -27.73s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-BDM-CellType.tetrahedron] -26.91s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -25.27s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -22.85s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -22.33s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] -22.27s call test/unit/fem/test_fem_pipeline.py::test_vector_S_tp[3-S-CellType.hexahedron] -20.98s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float64] -19.93s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] -18.73s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Discontinuous Lagrange-3-4] -18.72s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Lagrange-1-4] -18.66s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Lagrange-1-4] -18.50s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -18.39s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-1-4] -= 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 6090.56s (1:41:30) = +16.69s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +10.04s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +9.50s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +6.07s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +5.96s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] +4.94s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.76s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +4.62s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.hexahedron-DG] +4.41s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +4.38s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_matrix_assembly_block_nl +4.29s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] +4.24s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +4.19s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +4.13s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +4.12s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.triangle-DG] +4.01s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Discontinuous Lagrange-1-4] +3.59s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.tetrahedron-Lagrange] +3.57s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +3.54s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.43s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] += 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 1101.27s (0:18:21) = I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.31.1 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmp3zguwhbu/build/CMakeInit.txt +loading initial cache file /tmp/tmp4dce91p9/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -4855,24 +4891,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (19.0s) --- Generating done (0.1s) --- Build files have been written to: /tmp/tmp3zguwhbu/build +-- Configuring done (2.5s) +-- Generating done (0.0s) +-- Build files have been written to: /tmp/tmp4dce91p9/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmp3zguwhbu/build' +Change Dir: '/tmp/tmp4dce91p9/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmp3zguwhbu/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp3zguwhbu/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmp3zguwhbu/build/CMakeFiles /tmp/tmp3zguwhbu/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmp4dce91p9/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp4dce91p9/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmp4dce91p9/build/CMakeFiles /tmp/tmp4dce91p9/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmp3zguwhbu/build' +gmake[3]: Entering directory '/tmp/tmp4dce91p9/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmp3zguwhbu/build' -cd /tmp/tmp3zguwhbu/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp3zguwhbu/build /tmp/tmp3zguwhbu/build /tmp/tmp3zguwhbu/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp3zguwhbu/build' +gmake[4]: Entering directory '/tmp/tmp4dce91p9/build' +cd /tmp/tmp4dce91p9/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp4dce91p9/build /tmp/tmp4dce91p9/build /tmp/tmp4dce91p9/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp4dce91p9/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmp3zguwhbu/build' +gmake[4]: Entering directory '/tmp/tmp4dce91p9/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4898,14 +4934,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" 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/build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp4dce91p9/build /tmp/tmp4dce91p9/build /tmp/tmp4dce91p9/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp4dce91p9/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmp3zguwhbu/build' +gmake[4]: Entering directory '/tmp/tmp4dce91p9/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.12 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 54%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4933,16 +4969,16 @@ [100%] Linking CXX shared module cpp.cpython-312-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,--dependency-file,CMakeFiles/cpp.dir/link.d -Wl,-z,relro -shared -o cpp.cpython-312-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib/libpetsc_complex.so -gmake[4]: Leaving directory '/tmp/tmp3zguwhbu/build' +gmake[4]: Leaving directory '/tmp/tmp4dce91p9/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmp3zguwhbu/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmp3zguwhbu/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmp3zguwhbu/build' +gmake[3]: Leaving directory '/tmp/tmp4dce91p9/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp4dce91p9/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp4dce91p9/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmp3zguwhbu/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmp3zguwhbu/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" +-- Installing: /tmp/tmp4dce91p9/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp4dce91p9/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.22/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.22/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl @@ -5081,27 +5117,27 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -40.37s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -19.86s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] -17.43s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float32] -16.86s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] -16.32s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float64] -13.65s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -13.22s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -12.90s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -12.76s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -12.60s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -12.11s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] -12.03s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -11.99s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -11.49s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -10.93s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-BDM-CellType.tetrahedron] -10.70s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -10.64s call test/unit/la/test_nullspace.py::test_nullspace_check[1-3-complex128] -10.16s call test/unit/mesh/test_higher_order_mesh.py::test_submesh[float64-4] -10.11s call test/unit/fem/test_fem_pipeline.py::test_P_tp[3-Q-CellType.hexahedron] -10.01s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh0] -= 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 3435.75s (0:57:15) = +16.72s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +9.53s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +9.38s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +5.58s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +4.86s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +4.36s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] +4.34s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] +4.32s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +4.20s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +4.17s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +4.15s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +4.10s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +4.07s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +3.68s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] +3.52s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +3.46s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] +3.44s call test/unit/fem/test_element_integrals.py::test_facet_integral[float32-CellType.hexahedron] +3.40s call test/unit/fem/test_element_integrals.py::test_facet_integral[complex128-CellType.quadrilateral] +3.30s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] +3.27s call test/unit/fem/test_element_integrals.py::test_plus_minus_matrix[complex128-CellType.hexahedron----] += 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 1008.11s (0:16:48) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc @@ -5183,7 +5219,7 @@ -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (9.0s) +-- Configuring done (2.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -5248,11 +5284,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 2.20 sec +1/1 Test #1: unittests ........................ Passed 0.67 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 2.23 sec +Total Test time (real) = 0.67 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 @@ -5308,8 +5344,8 @@ -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success --- Configuring done (7.6s) --- Generating done (0.1s) +-- Configuring done (2.3s) +-- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 @@ -5448,57 +5484,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 - 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 4.26 sec + 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.50 sec Start 2: demo_biharmonic_mpi_3 - 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 2.88 sec + 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.47 sec Start 3: demo_biharmonic_serial - 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.95 sec + 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.42 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 1.30 sec + 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.39 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 1.53 sec + 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.40 sec Start 6: demo_codim_0_assembly_serial - 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.95 sec + 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.31 sec Start 7: demo_custom_kernel_mpi_2 - 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 9.29 sec + 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.88 sec Start 8: demo_custom_kernel_mpi_3 - 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 2.96 sec + 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.82 sec Start 9: demo_custom_kernel_serial - 9/24 Test #9: demo_custom_kernel_serial .................... Passed 1.44 sec + 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.84 sec Start 10: demo_poisson_mpi_2 -10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.77 sec +10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.43 sec Start 11: demo_poisson_mpi_3 -11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.84 sec +11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.42 sec Start 12: demo_poisson_serial -12/24 Test #12: demo_poisson_serial .......................... Passed 0.54 sec +12/24 Test #12: demo_poisson_serial .......................... Passed 0.32 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 1.38 sec +13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.43 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 1.91 sec +14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.41 sec Start 15: demo_poisson_matrix_free_serial -15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.54 sec +15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec Start 16: demo_hyperelasticity_mpi_2 -16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 2.77 sec +16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.56 sec Start 17: demo_hyperelasticity_mpi_3 -17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 3.41 sec +17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.86 sec Start 18: demo_hyperelasticity_serial -18/24 Test #18: demo_hyperelasticity_serial .................. Passed 2.03 sec +18/24 Test #18: demo_hyperelasticity_serial .................. Passed 1.00 sec Start 19: demo_interpolation-io_mpi_2 -19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.63 sec +19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.42 sec Start 20: demo_interpolation-io_mpi_3 -20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.69 sec +20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.47 sec Start 21: demo_interpolation-io_serial -21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.82 sec +21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.32 sec Start 22: demo_interpolation_different_meshes_mpi_2 -22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 4.77 sec +22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.89 sec Start 23: demo_interpolation_different_meshes_mpi_3 -23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 17.29 sec +23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.84 sec Start 24: demo_interpolation_different_meshes_serial -24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 2.91 sec +24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.80 sec 100% tests passed, 0 tests failed out of 24 -Total Test time (real) = 66.97 sec +Total Test time (real) = 25.53 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build @@ -5553,7 +5589,7 @@ -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (15.2s) +-- Configuring done (2.3s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -5618,11 +5654,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 2.81 sec +1/1 Test #1: unittests ........................ Passed 0.67 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 2.82 sec +Total Test time (real) = 0.67 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 @@ -5679,8 +5715,8 @@ -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode --- Configuring done (25.4s) --- Generating done (0.3s) +-- Configuring done (2.3s) +-- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 @@ -5802,57 +5838,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 - 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.80 sec + 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.54 sec Start 2: demo_biharmonic_mpi_3 - 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 1.45 sec + 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.53 sec Start 3: demo_biharmonic_serial - 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.79 sec + 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.50 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.53 sec + 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.39 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.85 sec + 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.40 sec Start 6: demo_codim_0_assembly_serial - 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.57 sec + 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.31 sec Start 7: demo_custom_kernel_mpi_2 - 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 6.24 sec + 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 1.03 sec Start 8: demo_custom_kernel_mpi_3 - 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 9.37 sec + 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.89 sec Start 9: demo_custom_kernel_serial - 9/21 Test #9: demo_custom_kernel_serial .................... Passed 1.82 sec + 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.85 sec Start 10: demo_poisson_mpi_2 -10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 2.36 sec +10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.48 sec Start 11: demo_poisson_mpi_3 -11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.89 sec +11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.43 sec Start 12: demo_poisson_serial -12/21 Test #12: demo_poisson_serial .......................... Passed 0.70 sec +12/21 Test #12: demo_poisson_serial .......................... Passed 0.32 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 1.73 sec +13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.39 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 1.76 sec +14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.40 sec Start 15: demo_poisson_matrix_free_serial -15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.73 sec +15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec Start 16: demo_interpolation-io_mpi_2 -16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.76 sec +16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.41 sec Start 17: demo_interpolation-io_mpi_3 -17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.76 sec +17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.52 sec Start 18: demo_interpolation-io_serial -18/21 Test #18: demo_interpolation-io_serial ................. Passed 1.31 sec +18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.32 sec Start 19: demo_interpolation_different_meshes_mpi_2 -19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 5.56 sec +19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.82 sec Start 20: demo_interpolation_different_meshes_mpi_3 -20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 11.30 sec +20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.74 sec Start 21: demo_interpolation_different_meshes_serial -21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 2.87 sec +21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.80 sec 100% tests passed, 0 tests failed out of 21 -Total Test time (real) = 53.19 sec +Total Test time (real) = 21.39 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex - cd obj-x86_64-linux-gnu-complex && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -5991,23 +6027,23 @@ Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Reading and parsing tag files Parsing files @@ -6391,12 +6427,6 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... @@ -6419,6 +6449,12 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... @@ -6439,9 +6475,9 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Generating file documentation... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... +Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... -Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... @@ -6679,6 +6715,7 @@ Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py +Generating XML output for file hyperelasticity.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp @@ -6687,7 +6724,6 @@ Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp -Generating XML output for file hyperelasticity.py Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md @@ -6746,12 +6782,6 @@ Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h Generating XML output for file AdjacencyList.h Generating XML output for file dolfinx_graph.h Generating XML output for file ordering.cpp @@ -6790,6 +6820,12 @@ Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp Generating XML output for file SparsityPattern.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h Generating XML output for file Vector.h Generating XML output for file cell_types.cpp Generating XML output for file cell_types.h @@ -6806,9 +6842,6 @@ Generating XML output for file Topology.h Generating XML output for file topologycomputation.cpp Generating XML output for file topologycomputation.h -Generating XML output for file utils.cpp -Generating XML output for file utils.cpp -Generating XML output for file utils.cpp Generating XML output for file dolfinx_nls.h Generating XML output for file NewtonSolver.cpp Generating XML output for file NewtonSolver.h @@ -6818,6 +6851,9 @@ Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h +Generating XML output for file utils.cpp +Generating XML output for file utils.cpp +Generating XML output for file utils.cpp Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ @@ -6842,7 +6878,7 @@ Generating XML output for the main page Running plantuml with JAVA... Running dot... -Generating dot graphs using 21 parallel threads... +Generating dot graphs using 43 parallel threads... Running dot for graph 1/67 Running dot for graph 2/67 Running dot for graph 3/67 @@ -6948,23 +6984,23 @@ RDMAV_FORK_SAFE=1 \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v7.4.7 -Matplotlib created a temporary cache directory at /tmp/matplotlib-d0jhwppc because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary cache directory at /tmp/matplotlib-1enkczwa because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. TNT degree 2 error: 0.0029421918345155706 -TNT degree 2 error: 0.00017118942553986642 -TNT degree 3 error: 8.385106828737083e-06 -TNT degree 4 error: 3.394990183622027e-07 -TNT degree 5 error: 1.2528243246291915e-08 -TNT degree 6 error: 4.2426963107010777e-10 -TNT degree 7 error: 1.9794047713048823e-10 -TNT degree 8 error: 2.9565584931541024e-10 +TNT degree 2 error: 0.00017118942553986276 +TNT degree 3 error: 8.385106828733812e-06 +TNT degree 4 error: 3.394990183621853e-07 +TNT degree 5 error: 1.2528243192173552e-08 +TNT degree 6 error: 4.242770704518221e-10 +TNT degree 7 error: 1.9793321846863418e-10 +TNT degree 8 error: 2.9565584931620583e-10 Q degree 1 error: 0.04076382001057708 -Q degree 2 error: 0.0029182213395269004 -Q degree 3 error: 0.00015944660110819758 -Q degree 4 error: 7.937421445106478e-06 -Q degree 5 error: 3.1034668624523215e-07 -Q degree 6 error: 1.1356498987237013e-08 -Q degree 7 error: 3.4161428239866125e-10 -Q degree 8 error: 6.19100847885188e-11 +Q degree 2 error: 0.002918221339526906 +Q degree 3 error: 0.00015944660110819565 +Q degree 4 error: 7.937421445106134e-06 +Q degree 5 error: 3.1034668624227087e-07 +Q degree 6 error: 1.1356498986978607e-08 +Q degree 7 error: 3.416145918786947e-10 +Q degree 8 error: 6.191546500379962e-11 Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 loading translations [en]... done @@ -7238,11 +7274,11 @@ dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.22-dev, libslepc-real3.22-dev" -Vpetsc-complex:Depends="libpetsc-complex3.22-dev, libslepc-complex3.22-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ \ -Vnanobind:Upstream-Version=2.2 -Vnanobind:Next-Upstream-Version=3 dpkg-gencontrol: warning: package libdolfinx-real-dev: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined @@ -7250,17 +7286,17 @@ make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake +dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-5_amd64.deb'. +dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-5_amd64.deb'. +dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-5_amd64.deb'. +dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-5_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-5_amd64.deb'. -dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-5_amd64.deb'. -dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-5_amd64.deb'. -dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-5_amd64.deb'. -dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-5_amd64.deb'. -dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-5_amd64.deb'. -dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-5_all.deb'. dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-5_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-5_amd64.deb'. +dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-5_amd64.deb'. +dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-5_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-5_amd64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -7268,12 +7304,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2224071/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/647716 and its subdirectories -I: Current time: Wed Dec 4 02:50:46 -12 2024 -I: pbuilder-time-stamp: 1733323846 +I: removing directory /srv/workspace/pbuilder/2224071 and its subdirectories +I: Current time: Wed Jan 7 00:50:12 +14 2026 +I: pbuilder-time-stamp: 1767696612