Diff of the two buildlogs: -- --- b1/build.log 2024-11-13 09:49:09.402536523 +0000 +++ b2/build.log 2024-11-13 09:58:33.498442666 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Dec 16 04:05:19 -12 2025 -I: pbuilder-time-stamp: 1765901119 +I: Current time: Wed Nov 13 23:49:13 +14 2024 +I: pbuilder-time-stamp: 1731491353 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,53 +29,85 @@ dpkg-source: info: applying simde.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/22572/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D01_modify_environment starting +debug: Running on infom07-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 13 09:49 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='838732db99c84d209b7e84558c38ad7d' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='22572' - PS1='# ' - PS2='> ' + INVOCATION_ID=c851d6095dc14cda8af0fdbacdbde735 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15575 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YPRUfQ9P/pbuilderrc_yNHp --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YPRUfQ9P/b1 --logfile b1/build.log scrappie_1.4.2-8.dsc' - SUDO_GID='111' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YPRUfQ9P/pbuilderrc_bHtc --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YPRUfQ9P/b2 --logfile b2/build.log scrappie_1.4.2-8.dsc' + SUDO_GID=111 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom08-i386 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/22572/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -227,7 +259,7 @@ Get: 104 http://deb.debian.org/debian trixie/main i386 libopenblas-pthread-dev i386 0.3.28+ds-3 [3542 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 libopenblas-dev i386 0.3.28+ds-3 [54.4 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libsimde-dev all 0.8.2-1 [465 kB] -Fetched 66.4 MB in 1s (85.3 MB/s) +Fetched 66.4 MB in 5s (14.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) @@ -673,7 +705,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/scrappie-1.4.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../scrappie_1.4.2-8_source.changes +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/scrappie-1.4.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../scrappie_1.4.2-8_source.changes dpkg-buildpackage: info: source package scrappie dpkg-buildpackage: info: source version 1.4.2-8 dpkg-buildpackage: info: source distribution unstable @@ -732,7 +768,7 @@ -- Looking for hdf5.h - not found -- Looking for hdf5/serial/hdf5.h -- Looking for hdf5/serial/hdf5.h - found --- Configuring done (1.4s) +-- Configuring done (0.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -770,7 +806,7 @@ -- Looking for hdf5.h - not found -- Looking for hdf5/serial/hdf5.h -- Looking for hdf5/serial/hdf5.h - found --- Configuring done (0.5s) +-- Configuring done (0.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -808,7 +844,7 @@ -- Looking for hdf5.h - not found -- Looking for hdf5/serial/hdf5.h -- Looking for hdf5/serial/hdf5.h - found --- Configuring done (1.0s) +-- Configuring done (0.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -848,7 +884,7 @@ -- Looking for hdf5.h - not found -- Looking for hdf5/serial/hdf5.h -- Looking for hdf5/serial/hdf5.h - found --- Configuring done (1.2s) +-- Configuring done (0.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -874,7 +910,7 @@ dh_auto_build --builddirectory build_${SIMD} && \ cp build_${SIMD}/scrappie build_${SIMD}/scrappie-${SIMD} ; \ done - cd build_ssse3 && make -j6 "INSTALL=install --strip-program=true" VERBOSE=1 + cd build_ssse3 && make -j5 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' /usr/bin/cmake -S/build/reproducible-path/scrappie-1.4.2 -B/build/reproducible-path/scrappie-1.4.2/build_ssse3 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/scrappie-1.4.2/build_ssse3/CMakeFiles /build/reproducible-path/scrappie-1.4.2/build_ssse3//CMakeFiles/progress.marks @@ -883,37 +919,37 @@ make -f CMakeFiles/scrappie_objects.dir/build.make CMakeFiles/scrappie_objects.dir/depend make -f CMakeFiles/test_interface.dir/build.make CMakeFiles/test_interface.dir/depend make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' -cd /build/reproducible-path/scrappie-1.4.2/build_ssse3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2/build_ssse3 /build/reproducible-path/scrappie-1.4.2/build_ssse3 /build/reproducible-path/scrappie-1.4.2/build_ssse3/CMakeFiles/scrappie_objects.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' cd /build/reproducible-path/scrappie-1.4.2/build_ssse3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2/build_ssse3 /build/reproducible-path/scrappie-1.4.2/build_ssse3 /build/reproducible-path/scrappie-1.4.2/build_ssse3/CMakeFiles/test_interface.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/scrappie-1.4.2/build_ssse3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2/build_ssse3 /build/reproducible-path/scrappie-1.4.2/build_ssse3 /build/reproducible-path/scrappie-1.4.2/build_ssse3/CMakeFiles/scrappie_objects.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' -make -f CMakeFiles/test_interface.dir/build.make CMakeFiles/test_interface.dir/build make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' make -f CMakeFiles/scrappie_objects.dir/build.make CMakeFiles/scrappie_objects.dir/build +make -f CMakeFiles/test_interface.dir/build.make CMakeFiles/test_interface.dir/build make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' -[ 5%] Building C object CMakeFiles/scrappie_objects.dir/src/event_detection.c.o +[ 2%] Building C object CMakeFiles/scrappie_objects.dir/src/event_detection.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/event_detection.c.o -MF CMakeFiles/scrappie_objects.dir/src/event_detection.c.o.d -o CMakeFiles/scrappie_objects.dir/src/event_detection.c.o -c /build/reproducible-path/scrappie-1.4.2/src/event_detection.c [ 5%] Building C object CMakeFiles/scrappie_objects.dir/src/decode.c.o -[ 7%] Building C object CMakeFiles/test_interface.dir/src/test_interface.c.o +[ 7%] Building C object CMakeFiles/scrappie_objects.dir/src/networks.c.o +[ 10%] Building C object CMakeFiles/scrappie_objects.dir/src/layers.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/decode.c.o -MF CMakeFiles/scrappie_objects.dir/src/decode.c.o.d -o CMakeFiles/scrappie_objects.dir/src/decode.c.o -c /build/reproducible-path/scrappie-1.4.2/src/decode.c -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/event_detection.c.o -MF CMakeFiles/scrappie_objects.dir/src/event_detection.c.o.d -o CMakeFiles/scrappie_objects.dir/src/event_detection.c.o -c /build/reproducible-path/scrappie-1.4.2/src/event_detection.c -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/test_interface.dir/src/test_interface.c.o -MF CMakeFiles/test_interface.dir/src/test_interface.c.o.d -o CMakeFiles/test_interface.dir/src/test_interface.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test_interface.c -[ 13%] Building C object CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -[ 13%] Building C object CMakeFiles/scrappie_objects.dir/src/networks.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -MF CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o.d -o CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -c /build/reproducible-path/scrappie-1.4.2/src/nnfeatures.c -[ 15%] Building C object CMakeFiles/scrappie_objects.dir/src/layers.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/networks.c.o -MF CMakeFiles/scrappie_objects.dir/src/networks.c.o.d -o CMakeFiles/scrappie_objects.dir/src/networks.c.o -c /build/reproducible-path/scrappie-1.4.2/src/networks.c /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/layers.c.o -MF CMakeFiles/scrappie_objects.dir/src/layers.c.o.d -o CMakeFiles/scrappie_objects.dir/src/layers.c.o -c /build/reproducible-path/scrappie-1.4.2/src/layers.c -[ 18%] Linking C executable test_interface +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/networks.c.o -MF CMakeFiles/scrappie_objects.dir/src/networks.c.o.d -o CMakeFiles/scrappie_objects.dir/src/networks.c.o -c /build/reproducible-path/scrappie-1.4.2/src/networks.c +[ 13%] Building C object CMakeFiles/test_interface.dir/src/test_interface.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/test_interface.dir/src/test_interface.c.o -MF CMakeFiles/test_interface.dir/src/test_interface.c.o.d -o CMakeFiles/test_interface.dir/src/test_interface.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test_interface.c +[ 15%] Linking C executable test_interface /usr/bin/cmake -E cmake_link_script CMakeFiles/test_interface.dir/link.txt --verbose=1 -[ 21%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_common.c /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_interface.dir/src/test_interface.c.o -o test_interface +[ 18%] Building C object CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -MF CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o.d -o CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -c /build/reproducible-path/scrappie-1.4.2/src/nnfeatures.c make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' -[ 21%] Built target test_interface +[ 18%] Built target test_interface +[ 21%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_common.c [ 23%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -[ 26%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.c +[ 26%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_seq_helpers.c [ 28%] Building C object CMakeFiles/scrappie_objects.dir/src/util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/util.c.o -MF CMakeFiles/scrappie_objects.dir/src/util.c.o.d -o CMakeFiles/scrappie_objects.dir/src/util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/util.c @@ -946,18 +982,16 @@ make -f CMakeFiles/scrappie.dir/build.make CMakeFiles/scrappie.dir/build make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' -[ 39%] Building C object CMakeFiles/scrappie.dir/src/scrappie.c.o [ 39%] Building C object CMakeFiles/scrappie.dir/src/scrappie_raw.c.o -[ 42%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -[ 44%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie.c.o -MF CMakeFiles/scrappie.dir/src/scrappie.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie.c +[ 39%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_raw.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_raw.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_raw.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_raw.c /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c -[ 47%] Building C object CMakeFiles/scrappie.dir/src/scrappie_events.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP 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CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o +[ 42%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_map_to_sequence.c +[ 44%] Building C object CMakeFiles/scrappie.dir/src/scrappie.c.o +[ 47%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie.c.o -MF CMakeFiles/scrappie.dir/src/scrappie.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie.c +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_ssse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security 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-ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -mssse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_event_table.c @@ -1031,7 +1067,7 @@ make[3]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/scrappie-1.4.2/build_ssse3/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' - cd build_sse3 && make -j6 "INSTALL=install --strip-program=true" VERBOSE=1 + cd build_sse3 && make -j5 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' /usr/bin/cmake -S/build/reproducible-path/scrappie-1.4.2 -B/build/reproducible-path/scrappie-1.4.2/build_sse3 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/scrappie-1.4.2/build_sse3/CMakeFiles /build/reproducible-path/scrappie-1.4.2/build_sse3//CMakeFiles/progress.marks @@ -1044,30 +1080,30 @@ make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' cd /build/reproducible-path/scrappie-1.4.2/build_sse3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2/build_sse3 /build/reproducible-path/scrappie-1.4.2/build_sse3 /build/reproducible-path/scrappie-1.4.2/build_sse3/CMakeFiles/test_interface.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' -make -f CMakeFiles/scrappie_objects.dir/build.make CMakeFiles/scrappie_objects.dir/build 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-fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, @@ -1142,53 +1162,69 @@ /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ -[ 71%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o +[ 50%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/scrappie_util.c +[ 52%] Building C object CMakeFiles/scrappie.dir/src/scrappie_events.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. 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CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_convolution.c +[ 57%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_skeleton.c -/build/reproducible-path/scrappie-1.4.2/src/scrappie_event_table.c: In function 'main_event_table': -/build/reproducible-path/scrappie-1.4.2/src/scrappie_event_table.c:155:42: warning: format '%zu' expects argument of type 'size_t', but argument 4 has type 'uint64_t' {aka 'long long unsigned int'} [-Wformat=] - 155 | fprintf(args.output, "%zu\t%zu\t%f\t%f\t%d\n", i, ev.start, ev.mean, ev.stdv, (int)ev.length); - | ~~^ ~~~~~~~~ - | | | - | unsigned int uint64_t {aka long long unsigned int} - | %llu -[ 78%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o +[ 60%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse3/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o.d -o 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CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse3/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_event_table.c +[ 97%] Linking C executable scrappie_unittest /usr/bin/cmake -E cmake_link_script CMakeFiles/scrappie_unittest.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd 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CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_seq_helpers.c [ 28%] Building C object CMakeFiles/scrappie_objects.dir/src/util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/util.c.o -MF CMakeFiles/scrappie_objects.dir/src/util.c.o.d -o CMakeFiles/scrappie_objects.dir/src/util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/util.c @@ -1255,22 +1291,20 @@ make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' cd /build/reproducible-path/scrappie-1.4.2/build_sse2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2/build_sse2 /build/reproducible-path/scrappie-1.4.2/build_sse2 /build/reproducible-path/scrappie-1.4.2/build_sse2/CMakeFiles/scrappie_unittest.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' -make -f CMakeFiles/scrappie_unittest.dir/build.make CMakeFiles/scrappie_unittest.dir/build -make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' make -f CMakeFiles/scrappie.dir/build.make CMakeFiles/scrappie.dir/build +make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' +make -f CMakeFiles/scrappie_unittest.dir/build.make CMakeFiles/scrappie_unittest.dir/build make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' -[ 42%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o -[ 42%] Building C object CMakeFiles/scrappie.dir/src/scrappie_events.c.o -[ 42%] Building C object CMakeFiles/scrappie.dir/src/scrappie_raw.c.o -[ 44%] Building C object CMakeFiles/scrappie.dir/src/scrappie.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_raw.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_raw.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_raw.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_raw.c -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o.d -o 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-I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, @@ -1285,40 +1319,51 @@ /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ -[ 52%] Building C object CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_mappy.c -[ 55%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o +[ 50%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial 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-Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_events.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_events.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_events.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_events.c In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from /build/reproducible-path/scrappie-1.4.2/src/test/scrappie_util.c:4: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ -[ 57%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o +[ 55%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_sse2/include -I/usr/include/hdf5/serial 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97%] Linking C executable scrappie_unittest +/usr/bin/cmake -E cmake_link_script CMakeFiles/scrappie_unittest.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/scrappie_unittest.dir/src/test/scrappie_test_runner.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o 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CMakeFiles/scrappie_objects.dir/src/event_detection.c.o.d -o CMakeFiles/scrappie_objects.dir/src/event_detection.c.o -c /build/reproducible-path/scrappie-1.4.2/src/event_detection.c +make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_plain' /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/layers.c.o -MF CMakeFiles/scrappie_objects.dir/src/layers.c.o.d -o CMakeFiles/scrappie_objects.dir/src/layers.c.o -c /build/reproducible-path/scrappie-1.4.2/src/layers.c -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -MF CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o.d -o CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -c /build/reproducible-path/scrappie-1.4.2/src/nnfeatures.c -In file included from /build/reproducible-path/scrappie-1.4.2/src/models/../util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/models/nanonet_events.h:4, - from /build/reproducible-path/scrappie-1.4.2/src/networks.c:2: -/build/reproducible-path/scrappie-1.4.2/src/models/../sse_mathfun.h: In function 'log_ps': -/build/reproducible-path/scrappie-1.4.2/src/models/../sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] - 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { - | ^~~~~~ +[ 10%] Building C object CMakeFiles/scrappie_objects.dir/src/networks.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/networks.c.o -MF CMakeFiles/scrappie_objects.dir/src/networks.c.o.d -o CMakeFiles/scrappie_objects.dir/src/networks.c.o -c /build/reproducible-path/scrappie-1.4.2/src/networks.c +[ 13%] Building C object CMakeFiles/test_interface.dir/src/test_interface.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/test_interface.dir/src/test_interface.c.o -MF CMakeFiles/test_interface.dir/src/test_interface.c.o.d -o CMakeFiles/test_interface.dir/src/test_interface.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test_interface.c In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/layers.c:9: + from /build/reproducible-path/scrappie-1.4.2/src/decode.c:5: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/nnfeatures.c:5: + from /build/reproducible-path/scrappie-1.4.2/src/layers.c:9: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ -In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/decode.c:5: +In file included from /build/reproducible-path/scrappie-1.4.2/src/test_interface.c:17: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ -In file included from /build/reproducible-path/scrappie-1.4.2/src/test_interface.c:17: -/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': -/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] +In file included from /build/reproducible-path/scrappie-1.4.2/src/models/../util.h:10, + from /build/reproducible-path/scrappie-1.4.2/src/models/nanonet_events.h:4, + from /build/reproducible-path/scrappie-1.4.2/src/networks.c:2: +/build/reproducible-path/scrappie-1.4.2/src/models/../sse_mathfun.h: In function 'log_ps': +/build/reproducible-path/scrappie-1.4.2/src/models/../sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ -[ 18%] Linking C executable test_interface +[ 15%] Linking C executable test_interface /usr/bin/cmake -E cmake_link_script CMakeFiles/test_interface.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_interface.dir/src/test_interface.c.o -o test_interface +[ 18%] Building C object CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -MF CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o.d -o CMakeFiles/scrappie_objects.dir/src/nnfeatures.c.o -c /build/reproducible-path/scrappie-1.4.2/src/nnfeatures.c make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_plain' [ 18%] Built target test_interface [ 21%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_common.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_common.c -[ 23%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.c -[ 26%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_seq_helpers.c +In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, + from /build/reproducible-path/scrappie-1.4.2/src/nnfeatures.c:5: +/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': +/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] + 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { + | ^~~~~~ In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, from /build/reproducible-path/scrappie-1.4.2/src/scrappie_common.c:3: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ +[ 23%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_matrix.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.c +[ 26%] Building C object CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -MF CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o.d -o CMakeFiles/scrappie_objects.dir/src/scrappie_seq_helpers.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_seq_helpers.c /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.c: In function 'row_normalise_inplace': /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.c:391:18: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 391 | const __m128 mask = _mm_cmpgt_ps(_mm_set_ps(i >= 1, i >= 2, i >= 3, 0), _mm_set1_ps(0.0f)); | ^~~~ [ 28%] Building C object CMakeFiles/scrappie_objects.dir/src/util.c.o /usr/bin/cc 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-Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT CMakeFiles/scrappie_objects.dir/src/homopolymer.c.o -MF CMakeFiles/scrappie_objects.dir/src/homopolymer.c.o.d -o CMakeFiles/scrappie_objects.dir/src/homopolymer.c.o -c /build/reproducible-path/scrappie-1.4.2/src/homopolymer.c make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_plain' [ 31%] Built target scrappie_objects make -f CMakeFiles/scrappie_static.dir/build.make CMakeFiles/scrappie_static.dir/depend @@ -1460,35 +1496,40 @@ make[4]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_plain' cd /build/reproducible-path/scrappie-1.4.2/build_plain && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2 /build/reproducible-path/scrappie-1.4.2/build_plain /build/reproducible-path/scrappie-1.4.2/build_plain 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CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_seqmappy.c -[ 52%] Building C object CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_squiggle.c -[ 55%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 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-MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_map_to_sequence.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_map_to_sequence.c +[ 50%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c +[ 52%] Building C object CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_mappy.c +In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, + from /usr/include/stdint.h:26, + from /usr/lib/gcc/i686-linux-gnu/14/include/stdint.h:9, + from /usr/include/simde/simde-common.h:41, + from /usr/include/simde/x86/mmx.h:30, + from /usr/include/simde/x86/sse.h:33, + from /usr/include/simde/x86/avx.h:28, + from /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.h:6, + from /build/reproducible-path/scrappie-1.4.2/src/test/scrappie_util.h:4, + from /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c:6: +/usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] + 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" + | ^~~~~~~ In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/scrappie_mappy.c:13: -/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': -/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] - 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { - | ^~~~~~ -In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/scrappie_seqmappy.c:14: + from /build/reproducible-path/scrappie-1.4.2/src/test/test_map_to_sequence.c:7: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { @@ -1506,46 +1547,41 @@ 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, - from /build/reproducible-path/scrappie-1.4.2/src/test/test_map_to_sequence.c:7: + from /build/reproducible-path/scrappie-1.4.2/src/scrappie_mappy.c:13: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ -[ 57%] Building C object CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_subcommands.c -[ 60%] Building C object CMakeFiles/scrappie.dir/src/scrappie_help.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_help.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_help.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_help.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_help.c -[ 63%] Building C object CMakeFiles/scrappie.dir/src/fast5_interface.c.o -[ 65%] Building C object CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP 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-I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c -In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, - from /usr/include/stdint.h:26, - from /usr/lib/gcc/i686-linux-gnu/14/include/stdint.h:9, - from /usr/include/simde/simde-common.h:41, - from /usr/include/simde/x86/mmx.h:30, - from /usr/include/simde/x86/sse.h:33, - from /usr/include/simde/x86/avx.h:28, - from /build/reproducible-path/scrappie-1.4.2/src/scrappie_matrix.h:6, - from /build/reproducible-path/scrappie-1.4.2/src/test/scrappie_util.h:4, - from /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_util.c:6: -/usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] - 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" - | ^~~~~~~ -[ 71%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o -[ 73%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o -[ 76%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o +[ 55%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/scrappie_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/scrappie_util.c -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP 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CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_skeleton.c In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from /build/reproducible-path/scrappie-1.4.2/src/test/scrappie_util.c:4: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ +[ 57%] Building C object CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_seqmappy.c +[ 60%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_convolution.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_convolution.c +[ 63%] Building C object CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_squiggle.c +[ 65%] Building C object CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_subcommands.c +In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, + from /build/reproducible-path/scrappie-1.4.2/src/scrappie_seqmappy.c:14: +/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': +/build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] + 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { + | ^~~~~~ +[ 68%] Building C object CMakeFiles/scrappie.dir/src/scrappie_help.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_help.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_help.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_help.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_help.c +[ 71%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_skeleton.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_skeleton.c +[ 73%] Building C object CMakeFiles/scrappie.dir/src/fast5_interface.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/fast5_interface.c.o -MF CMakeFiles/scrappie.dir/src/fast5_interface.c.o.d -o CMakeFiles/scrappie.dir/src/fast5_interface.c.o -c /build/reproducible-path/scrappie-1.4.2/src/fast5_interface.c +[ 76%] Building C object CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -MF CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o.d -o CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -c /build/reproducible-path/scrappie-1.4.2/src/scrappie_event_table.c [ 78%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_decoding.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_decoding.c In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, @@ -1567,20 +1603,20 @@ | | | | unsigned int uint64_t {aka long long unsigned int} | %llu -[ 81%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_elu.c -[ 84%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o -/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_event_detection.c In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, from /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_decoding.c:11: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ -[ 86%] Linking C executable scrappie -/usr/bin/cmake -E cmake_link_script CMakeFiles/scrappie.dir/link.txt --verbose=1 -[ 89%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_matrix.c.o +[ 81%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_elu.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_elu.c +[ 84%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o +/usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_event_detection.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_event_detection.c +[ 86%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_matrix.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_matrix.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_matrix.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_matrix.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_matrix.c +[ 89%] Linking C executable scrappie +/usr/bin/cmake -E cmake_link_script CMakeFiles/scrappie.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/scrappie.dir/src/scrappie.c.o CMakeFiles/scrappie.dir/src/scrappie_raw.c.o CMakeFiles/scrappie.dir/src/scrappie_events.c.o CMakeFiles/scrappie.dir/src/scrappie_mappy.c.o CMakeFiles/scrappie.dir/src/scrappie_seqmappy.c.o CMakeFiles/scrappie.dir/src/scrappie_squiggle.c.o CMakeFiles/scrappie.dir/src/scrappie_subcommands.c.o CMakeFiles/scrappie.dir/src/scrappie_help.c.o CMakeFiles/scrappie.dir/src/fast5_interface.c.o CMakeFiles/scrappie.dir/src/scrappie_event_table.c.o -o scrappie libscrappie.a -lblas -lhdf5_serial -lm In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, from /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_elu.c:5: @@ -1602,12 +1638,12 @@ /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h:100:1: warning: SSE vector return without SSE enabled changes the ABI [-Wpsabi] 100 | static inline v4sf __attribute__((__always_inline__)) log_ps(v4sf x) { | ^~~~~~ +make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_plain' +[ 92%] Built target scrappie [ 94%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_squiggle.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_squiggle.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_squiggle.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_scrappie_squiggle.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_scrappie_squiggle.c [ 97%] Building C object CMakeFiles/scrappie_unittest.dir/src/test/test_util.c.o /usr/bin/cc -I/build/reproducible-path/scrappie-1.4.2/build_plain/include -I/usr/include/hdf5/serial -I/build/reproducible-path/scrappie-1.4.2/src/test -I/build/reproducible-path/scrappie-1.4.2/src -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scrappie-1.4.2=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT CMakeFiles/scrappie_unittest.dir/src/test/test_util.c.o -MF CMakeFiles/scrappie_unittest.dir/src/test/test_util.c.o.d -o CMakeFiles/scrappie_unittest.dir/src/test/test_util.c.o -c /build/reproducible-path/scrappie-1.4.2/src/test/test_util.c -make[4]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_plain' -[ 97%] Built target scrappie In file included from /build/reproducible-path/scrappie-1.4.2/src/util.h:10, from /build/reproducible-path/scrappie-1.4.2/src/test/test_util.c:5: /build/reproducible-path/scrappie-1.4.2/src/sse_mathfun.h: In function 'log_ps': @@ -1629,10 +1665,10 @@ for SIMD in ssse3 sse3 sse2 ; do \ dh_auto_test --builddirectory build_${SIMD} ; \ done - cd build_ssse3 && make -j6 test ARGS\+=--verbose ARGS\+=-j6 + cd build_ssse3 && make -j5 test ARGS\+=--verbose ARGS\+=-j5 make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j6 +/usr/bin/ctest --force-new-ctest-process --verbose -j5 UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_ssse3/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_ssse3/DartConfiguration.tcl Test project /build/reproducible-path/scrappie-1.4.2/build_ssse3 @@ -1672,12 +1708,6 @@ 5: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "raw" "--model" "rgrgr_r941" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" 5: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 5: Test timeout computed to be: 10000000 -test 6 - Start 6: test_rawrgrgr_r10_call - -6: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 -6: Test timeout computed to be: 10000000 1: 1: 1: CUnit - A unit testing framework for C - Version 2.1-3 @@ -1824,15 +1854,16 @@ 1: passed 1: Test: Test mapping -- Viterbi with relaxed band4 equals Viterbi ...vit = -109.542824 vitB = -109.542824 1: passed +3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.325922, "nblock" : 16158, "sequence_length" : 9258, "blocks_per_base" : 1.745301, "nsample" : 81106, "trim" : [ 200, 80990 ] } 1: Test: Test mapping -- Viterbi with relaxed band5 equals Viterbi ...vit = -109.542824 vitB = -109.542824 1: passed 1: Test: Test mapping -- Viterbi with relaxed band2 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed +5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } 1: Test: Test mapping -- Viterbi with relaxed band3 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed 1: Test: Test mapping -- Viterbi with relaxed band4 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed -3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.325922, "nblock" : 16158, "sequence_length" : 9258, "blocks_per_base" : 1.745301, "nsample" : 81106, "trim" : [ 200, 80990 ] } 2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.273149, "nevent" : 16119, "sequence_length" : 9414, "events_per_base" : 1.712237 } 1: Test: Test mapping -- Viterbi with relaxed band5 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed @@ -2058,28 +2089,37 @@ 1: tests 71 71 71 0 0 1: asserts 506 506 506 0 n/a 1: -1: Elapsed time = 3.875 seconds - 1/19 Test #1: unittest ......................... Passed 5.74 sec +1: Elapsed time = 5.096 seconds + 1/19 Test #1: unittest ......................... Passed 6.38 sec +test 6 + Start 6: test_rawrgrgr_r10_call + +6: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 +6: Test timeout computed to be: 10000000 +4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.295786, "nblock" : 16158, "sequence_length" : 9512, "blocks_per_base" : 1.698696, "nsample" : 81106, "trim" : [ 200, 80990 ] } +3: GCAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTATGTCTTAACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCAACTACTCTCCGGGAGACTGAGGCAGGAGAATCCTTAAACCCGGGGCAGGGTTGAAGTGAGCCGAGGTCTCACCTCATTGCACTCCAGCCTATGGGTGACAGGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAAATCAGTTTCCCGTAATTATTTTAGAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTAGTAGGTATCTAATAGAAAGCGTTCATTTAAGGAATAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATGTATTCTGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTATAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTTTATTTCCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAAGAAGGTAATATAAAAATGGAGTATGAACAAAATTGAAATCCTTTGCTATGAAGTTGAAAATACTAGTTTGTACATGTAAGCCTGTACGATAATAAAAATATAAATATATAATTTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTAGTTGAATATTTCACTTTTCACGTACAACTTTCTCACAAAGTTGATAGTGTTTATTTCTATTTTTGTATGTGCAGCCTCATATTATTTGTCTTTTCTCGTTAGAGTATCATTTCAACTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAACACAAACGTTGTTGAAACTTGAGGTAGAATAAAATATTAAATATTTCTTTGCCTTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCTGGAAATGCAAAATTAGAACATGCCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTTTCCTCATCTTCCCTCATTTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTAGCAAGTTTTTCATTCATTGTTTTTTTTCCATGTATTTCTGTAAGCCTCTTGTTGCAATCTTCACCTTGGCGTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGGTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTTTTCTGCAGTACATAGTGCGTAATGGCCTCAATGGTAGCTACTGTATTGATGGAAGTATTGCCATACTCCCTTCATATCTAAACCAGAGATGGTGATCTTTCTTAAGGGCCGGATAACGAACATTTTTGTGCTTATGGACCACGTAGTTTCTGTCTCACCTGGCCCGGCTCTACTGTATTGTAGAAGCAGCCATGGGCGTCTCTATGTGAATGGGCGTGACTGTGTTTTCAAAAGCAACAGTATGTGCAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTGGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCGCTCTTCCTGTTGCTTTGGCAATGCTTATTTATTTTTGCCAGGTTTTCTTCCTTATACTCTACAAAGGTCTTTCTGATCCTCTGAGCTGTATCAGATGCCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTATGTTTCCCTGACTTTGGGTGTGAGTTCTTGAAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTATTAGGTTGTAGATTTCGAGCTTTTGATCTCAAAGATCAGCTGTGCATTTAAAAAACACATATGCCTGGGCCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCTAGATAAGAAGTGCCCCCAAAATATATATTGAATAAAAAGCAATAAAACAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTATTTACTAACTTCTGATACAGACTCAGACAGGCACTTAGAATAACTGCCTTTAAAAGTCATGGATGTTCAAATGCCGTAATGGAACACTATTCACCAACAGAGATGTTGTGGACTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAAAGTGAGTTAGCAAATGCTGTTAGAAACTGTCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACAGTTCCATTAGTATTTGTGCCAAGTGCCACAAGTTATCTTCCTCAAGAATGAATCTGCTTTTGTGATCTTATTTGAGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTAAGGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGCTTCTAGTTTTTTTGTTTGTTTGTTGTTTTTAAATGGGGTCTTGCTCTGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGGTCTCACTGTGTTTCCCAGGCTGATCTTGTGAACTCCGGTCCGTAGTCACGCCCACCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCTTATGCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTCTTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCTATACTGTTGCCCAGGCGGTCCTAGACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATCCTATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGACCATAGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTGTAGCCTTAGAGAGGGCTGTCCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTGAGGGCCACTGAGGGTCATGGTGGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGAGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTCTTCTTTACTTACAGTGTTTTTGGTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACGGCGTGAGGGCTGCTTTTGGAACAAATTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTGAAACATTTAATGACTTTGTTCTTGTTTAAATAAGTAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATTGTAAATATTTCATTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATATTCCTTATCAAGGAAGCTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATATGATAAGTGATTGTCACCAGATGCAAAATATTGACTGTGTGTCAATACAGCTTCATGAAATTATTAACATTGCCTTGAGACAGACCTAAATGAATCAAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCCAGATAGAGATTATATAGAAGTAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTAGAAACACTTCATTTTAATTTCTTAGGGAGTGGATAGGAAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAAGACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTTTGCAACATGGGAACCACCCCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGAACGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAATCTCATGTCGGTTCCCTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTCCAGCAATTAGCCCAAAGTCCAAGTCCAAAGTCTCATCTGAGATAAAGGCCAAGATCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAAGGGCTGTAGGCCCCAAAGTCTGCAATCCAACTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCGCATCCAGCCCACTGATGCAAGTGGGCTCCCCACAACCTCATGCGAAAAGCTCTCGACCTCTGGCTCCATGCCTCATCCAGCCCACTGATGCAAGAGTGGGCTCCAGCAATCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTACCTCTCTGCTGTTTTCACAGGCTGGCGTTGGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCTGCCATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCCACTAGGCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCATAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCAGGCATTTCTATACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTGCTGTGCACCACATGTAAGCCGCCAAGGCTTAGAACTTACACTCTCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCAAGCAGCAAGGCCCTGGCCCACAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATAGGCTGCCACGTGAAGACCTTGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAAATGGGTTTTTTCTTTCTACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGGAATCAGCCAGGTCACCTGTTGAGATGCTTTGCTGTAGAAATTTCTTCCACAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAACAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCAACCATCTAACAAGTCTCTAGGAAATTTGCAAACTTTCCACTTCTTCCTGTCTTCTAGGCCCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCGAACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGTGGAGGTTAGGAAGTCAAGGTTGAGGTCCCTACATCTAGCAAGGGCTTTCTTGCTGCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAAACAAGTGTAGAGATCCTTTTATAATAAAACCATTCTCAATAACCCCTCCTTAGTAACAATGAATTATTCATTCATGGGGATAGAGCCCTTATGTGAAGCAATCATCTTTTAATGCAGCTTCTCTTCCAATACTGCCACTACAGGATTAAGTTTCCAACATGAACTTTGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCGCCGTTACAAATTAGTGAAATAATGTAGTACTTTCTCCCACAACTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTATATTTGTTAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTCTCTGTAATTATAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACAGTAGTCCTCATAACATCTCAGTAGATTCTTGGAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTATTCTGTAGATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATTATCACCAGATGAGGAGAAACAGGGTTTTGCTTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCATATTCACCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGGTGCATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTGTAAAGTATTGACAGTAATATTATAATAAAATGTCATCACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTGCCCAAGGCTTTGACTCTAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGGTATAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCCGCGCCTCATCCTATTTTCCTGTTGCTTGCTCTAGAACTCACCATCTGGTATCCAGAGTTAGGTATTGTCTTCATATTGCCTTTTCAGTGTAGAATCACCCTGTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCGGCCATCCCTTCACAACAATTAGGACTTTCACCGTTTTTAGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAGTGCTGACATTTCTGCAAACATGTGATTTTTTAAATGTATTTCATTGCAAGAATCTGGCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGAAGTTTAAAATATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTAACCAGCAATACGTAGT +3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.319873, "nblock" : 12818, "sequence_length" : 4612, "blocks_per_base" : 2.779271, "nsample" : 64395, "trim" : [ 200, 64290 ] } +3: CTTCCGTTCGAGTTACGTGTTATCTTTGCCTGCAATCCATCTATCTTCGGCGTCTGCTTGGGTGACATACCCATGGAAACTATAATTTTTTTAACAATTGGAAATTCTTCAGTTTTTATATTTAACAGTTTTTGATTTTCTAACTGTGAAAATATATGGACCTGATTAGTTTTGTATATTTGCGCAATATTGGCTAACAATATTTTTCTGAATTTACTTACTAATTCTCCAGCATAGATTCTTATGGGACTGTCATATATTAATCATGCGATTATGAATATGTGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTGCTTTATTGTCCTGGCTGGAATATTTCGCACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTTAGTATTTCAACAGGTTTTTGGGAACTGGTGATGTTTGATTACATGGAATCACGGTTCTTTACTGGTGATTTGACATTTTGTTACCATCACCTGAACTTGGTATTATCCAGTGATTGTAGTCTTTTATCCATATCCTCCTCACCCGTTTCCCCAGTCCTCAAGTCCGTTAGCATCATTTGCCACCTTTTGCATCCTCATACTGATGAAGATGATGTTTGTTTCATTCCTGAGTTACTTCGCGAATGTGATCTCCATTCCATTCAAATTGCTGAAAATGCATTATTTCGTTCCTTTTTGTGGCTGGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTGATGGGCATTTGACTGGTTTTCATATTTTTTCCAATTGCAAATTGGTGCTGCTATAAACGCCATTTTGGCACTGTACATTACGTATCTATTTCGTATAATGGCTTCTTCTGGGCCAAGGTAGGTCTAAGATCTGCTTTTAGTTCTTTAAAGATCTCCTTTACGGCTAATGGTTATACTGGATTTACATTCCATCAACATTGTTAGGTGTTTTCCTTTTCACCAGTCACAACATCTGTGTTTTGATTTTTTTATTAGGGGCCATTCTTTCAGGGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTTTAATAGGTTTGAGGCCATTTATATCTTCTTTGAAATTGTCTATTCATGTCCTTAACTTTTTGATAGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAATTTTCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTAGTTGGGTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCAGAAGTCTTTTACTAACCCAATGTCGAGGTTTTTTTCAACGTTATCTTCTAGAATTTTTTTACCGGGTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTGGATCCAGTTTCATTCTTCGACATGGCAGGTTTGAGTGATGTCATTTGTTGGTCGGGTCCTTTCCCCACTTCATATTTTGTTTGTTTGTTGAGATCTTGAGATTGGCTGTACGTGTTTAGCTTTATCTCTTGGTTCTCTATTCTCTTCATTGGTCTTATGCCTGTTTTTTATACCAGTACCATGCTGTTTTTGCTGATGGTGGCCATTATAGTTTGAAGTCAAATGTAATTACCTCAATTTGTTCTTTACTTAATCTTTACTTTGGCTGGGGCCTCTTTTTGGTTCCATACCGATTTTAGGATTGTTTTTCTCATTCTGTAGAATATTAGGTAGTATTTTTGATGAGTGCATTAGATTTGTAGGTACTTTTGGCGTATATGGTCATTTCTATGTGATTTACTCATCATGAGAATGGATGTATTTCCATTTGTTGTGTATGATTTCTTTTTTTCAGCAGTGTTTTGTTGTTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAGTATAGTCAAATATATATATATATATATATATTTACGCTAATATAAAGTTGGGGATTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGGCTATAGCGGGCTACTGATTTGTGTACATTAATTTTGTATCTAGGCTTTGCTGGAATTCATTTTAACAGTTCAGGAACTTTTAGTTTGGAGTCTTTTGGGTTTCTAGGTATACGATCATATCATCAGCAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTACTCTGGCTGGGACTTTATGTTGAAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCCGCACGGGAAATGCTTTCTTTTTCCATTAAATGTCTAATGTTGTTGGCTGTAGGTTTTGTATCACAGGTGGTTTTTATTACCTTAAACGCCTTCTACGTAGATTTTACTGGGGACTTTAATCATAAAAGGATTACTGGATTTTTTTTGTCAAATATTTTTTTCTGTGTTTGTAGAGATGATCATGTGATTCTTATTTTTAATTCTGTTTTTATATTTATATCATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCCTAGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTAATACGTGGATTTGGATTCAGTTAGCTAAGTATTTTTATTGAGATTTTTGCATCGTTAATCAGTGATGGGTCTCAGTTTTATTTTTTTGTTATAATGTCCTTTCCTGGTTTTGATATTACAGTGATGCAGCTTCATTGGATGATTTAGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGGATTGGTACCAATTTTTCTTTGAATACCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAAACTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGTTGTATCTTTCAAGAATTTATCTCCTCTGAGTTTTTCGTTTATATTACGCCCACAGAGTGTCATAGTAGCCTCCGTGATCTTTTGTATTTCTGTATGCTGAATTTGTAATATCTCCCATTTCATTTTAAGTAAACTTATTTGGATCTTCTCTTTTTTTTTTTTCTTGGTTAATCTTACTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTGTTTATCTTTTTTTTTTTTTGTATATTTTTGTTTCAATTCCGGCTTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTCTGCTGGGTTTAGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGTGTGACCTTAGATTGTCTATTTATTACTTTTTCAGGGCTTTAGATGTAGGTTAATATTCTCGATTTCTATTATGTAGGTATAATGCTATAGAGATTCCTATTCTGGTGTATTTCGAGATTTGTTTTCAGATTTGGGGAGCTCCTTTGCTTGGTTTTGTAGTACTCAGTATTTGTCTGAAAAATACTATCTTCCTTCATTTATAAACTTAGTTTCCTGGATACAAATTCTTGGCTATTTGTTTAGTTTAAAGACTACCGGTAGGACCCCAATCCACTTGTCTTTGCTGTATCCCAGTTTTGATAGGTTGTGTCCTACTATTGTTCAGTTGAGATTTTTTATTTCTATCTGGTTCATTGTTCACCCAATGATTTTTTCAGGATTGTTAATTTGATGTATTTGCAATGTCTTTGAAATTTCTTTTAGAGGTTGGTTCAATCTTAATTCCTATAGTCTGACATAGTACTTGTCATTTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTAGCCTATATATATTTCTATATTAGAGGAATGTTCCATGTGCTGATGAATAAGTCTTATGTTTATTTGTTATTGCGTCTTCTCCCTTATCCCTGTAAATCCGTTGTTGTAAGGAGTGTAGTTTAAAGTACATTGTTTTTCTTTGTTAACTTTTCTATCTTGATGATCTGTATCTAGTGCTGTCATTAGATGCTAAGTCCCTATTGCTGTGTTACCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTGGGGCGCTCAGTATTAGGCACCCATGTTTAGGATTGTGATATTTTTCGTTCGTCCTTTTATCATTATAATGTCTCTCTTTGTATTTTTTACCGGCTGTTGCTTCGTTTGTTTTGTCTGATACAGAATAGTTATTCCTGCTTGCTTTTTAGTGTCCATTGCATGGGATATCTTTCTACCTTTACCGTATATGAGTCCTTAGTATTGGTGAGTCTAGTAGAGACAGTAGATACTTAGTTAGGTAATTCTCCATTCTGCCATTCTGTATCTTTTTAGGTGGAGCGTAGGCCATTTATTCAGTGTTAGTATTGAGATGGTACTATTCTATTCATCGCGATATTTGGTGCCTAGATACCTTGGTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGAGGATTAAACGCAAAAACGGAACGCCGAA +3: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.590575, "nblock" : 5778, "sequence_length" : 2399, "blocks_per_base" : 2.408504, "nsample" : 29150, "trim" : [ 200, 29090 ] } +3: TCGGTGCGCATTCAAGCCAACCCTACCTCCTTCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTCGCGCCCCTTCCGCTTGAATCGCCTTCACTAAGTATGTTGGTCCCACATGATAATTCGTAGATTGCATCGACTCCGTTTCCGAATGAACGTGGATCGGCATTTCAGTAGTAGGCTGGGGCGGATGGAAAAATCAGCGTGCCCTCTCCACAATCGATCATCCGTTTGTCGGCCGGTACGGTAGGACCAGTCGAACTACTCAACCATTACCTAGATGAGGAATCCGTTGATTTTGCATCGTTGGGATCAGTTGGTAAATTCAATAGAATAGTTGTCCTAGACAGGTTGATGGATGGGAGAACAAAGCGGGGCCATGGGCGGGATAATGGGCGGTTGGAAATGGGATACAGCTCCATTCAGCCCTACACTTCCATTCCTCGTATGCTACGATGAATCAGGCCATGCATATCGCTTTTATTGGCCATCAGTATAATTCCAGCCTACCGATATCGATCCATCCTAATTAAGTAGGTGGCTCTCAATGGATCAAGAGATTTAAACATCACAGGTAGGATGATCGTCAGGACTCAGACCTTCAGGAATAATCATGCGCCACCTCCTTTCACATGTCATTCAGTGTGGTATGGTAGGGTAAAATCACCTTCATTCGTACTTGCCTTCAGGCGATTTCAGATAGGTTTGAAACGAATCTGTTGGTATCGGACGAAAATTGGATCAACATACATCAGTAAACTGCATTCCGCTCGACATAGCTCTGGACTTTAGCATAGATACATTAGGCTGGCATGAATTGTGGGAGGAGCCCTCGGAATGGACTTGTCTGGGAGAATTTGAGATCCTAAAAGTGAGATGGCACTACTCTACTCCTCGTCGATGGATCCGCTTGTACAATACAATCCAATTTCTAGATGAATGAAATAGTAGGTGGTTGTGGGCCAGCATGGAGCAGGACCCTTCACTACAGCCACCTCCGATGCGGGGTTCATTGAGGTGCATTCTGCGTGCCTCTGTCGTGCAGGTACCTTAATAAGCCGGGAGGCATTTCAAAGCTGAATCAGGAGGTAAAAATGAGTAGGATTTTAAGCCGCCGAATGGGAAGAACATCCTCTCGTTACCGGCGCAGAATGCACTTCCTGCCGGCCAGGCCAGTCAAAATGTACGCCAGCCAGGAATCAGGAATAAAGACTCAGTCAGTGAACGGCGAGCCCGCGCTGTGCTTCCGCCACAGTGGTAGAAAAACGTCCAGGATCAAATTACGTATTTCAATTCCGTGGAACAATTTGAAAGGCTAAAGCCTAGTAAAATTCAACTGGACGGACAGAGCCCGGAAAAAGCCTCCCTACCCCACTTCAAAGCGGAATGAACGCGGGCTCAAACCCTACAAAATCGCGTATTAAGTAACATTTCGCCCGTACTACACTATCAATCAGCCATTACCTCCGTAAAATACCAAATAGGTGAGAAAATTTGCATCCGCCATCGTACAGCCATCAAATTAGCCCACTCAAAATGGAATTTTGGATGAAAAAGGTATCATTCGACTCACCCCCTTACTTAATATTACGCTGCTCGCGTAAATATTTCCCTTTATACCATCCCAATGCATGCCCAATGCTTAGCATCATGTATTTCGACTCAACACCCACCATGCGCGATGGCGTAAATATAGAAACCAGATACGAGATTTCAGGCATGCCACGCCAGCGGTCAGTATAAACCGGGCAAAATCAAATAGCCGCCAGGCTCCGGACGGTGAGGCGAGATACCGGGTAGATGGGCTGGCGCGCTACATACTCCCAGAAATAGGGCATGGAAGCGCTCCATCGGCGCGATACCAAGATGGGCCGGCACCACTTCACGCCAGCATCTAAATTTTGCCTCGATAAAAGAAATCGTCCCCGACGGTACCGACCCATGAACAGGCATTTTGTTGCCCCGTCGCGCTTGCCACCCATTCCAAAATAGGTGGCGCCAGTACGAAGCGGGCTGAGCTAAACGCGCGCACCGCTCAATGAATCGCATCATCAGCCTTCATCCTCGTACCAGATACCATGGCCTCCTCCACAGCCCGAAAATAGCAAATATCCCTTCAATATGCGCTGATGGGCTGGAAACAGTATGAATAGGCGGGCGGGCCAATGGAATGGCTATCAACAGCCAGCGAATGAACCGCTTCCAATAGGTAGAGCTAAATGCGCGGAGAAATTTGGCCTCCCGTACCGGCCAAACCTAATCAAAATTCTCCTTCGACGGGCAGCTACAGGCGAACAGCGCCAGTGAAAAACATGCGGAGCGGATGGGGTCCGTATCGCTTCGACGAAACTGCCTCCAGCAGGAAAATCAGCTGTCTCATGAAGCGGTGCGCATGAAA + 2/19 Test #3: test_raw_call .................... Passed 10.69 sec test 7 Start 7: test_rawrnnrf_r94_call 7: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" 7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 7: Test timeout computed to be: 10000000 -5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } -4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.295786, "nblock" : 16158, "sequence_length" : 9512, "blocks_per_base" : 1.698696, "nsample" : 81106, "trim" : [ 200, 80990 ] } -3: GCAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTATGTCTTAACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCAACTACTCTCCGGGAGACTGAGGCAGGAGAATCCTTAAACCCGGGGCAGGGTTGAAGTGAGCCGAGGTCTCACCTCATTGCACTCCAGCCTATGGGTGACAGGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAAATCAGTTTCCCGTAATTATTTTAGAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTAGTAGGTATCTAATAGAAAGCGTTCATTTAAGGAATAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATGTATTCTGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTATAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTTTATTTCCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAAGAAGGTAATATAAAAATGGAGTATGAACAAAATTGAAATCCTTTGCTATGAAGTTGAAAATACTAGTTTGTACATGTAAGCCTGTACGATAATAAAAATATAAATATATAATTTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTAGTTGAATATTTCACTTTTCACGTACAACTTTCTCACAAAGTTGATAGTGTTTATTTCTATTTTTGTATGTGCAGCCTCATATTATTTGTCTTTTCTCGTTAGAGTATCATTTCAACTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAACACAAACGTTGTTGAAACTTGAGGTAGAATAAAATATTAAATATTTCTTTGCCTTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCTGGAAATGCAAAATTAGAACATGCCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTTTCCTCATCTTCCCTCATTTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTAGCAAGTTTTTCATTCATTGTTTTTTTTCCATGTATTTCTGTAAGCCTCTTGTTGCAATCTTCACCTTGGCGTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGGTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTTTTCTGCAGTACATAGTGCGTAATGGCCTCAATGGTAGCTACTGTATTGATGGAAGTATTGCCATACTCCCTTCATATCTAAACCAGAGATGGTGATCTTTCTTAAGGGCCGGATAACGAACATTTTTGTGCTTATGGACCACGTAGTTTCTGTCTCACCTGGCCCGGCTCTACTGTATTGTAGAAGCAGCCATGGGCGTCTCTATGTGAATGGGCGTGACTGTGTTTTCAAAAGCAACAGTATGTGCAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTGGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCGCTCTTCCTGTTGCTTTGGCAATGCTTATTTATTTTTGCCAGGTTTTCTTCCTTATACTCTACAAAGGTCTTTCTGATCCTCTGAGCTGTATCAGATGCCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTATGTTTCCCTGACTTTGGGTGTGAGTTCTTGAAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTATTAGGTTGTAGATTTCGAGCTTTTGATCTCAAAGATCAGCTGTGCATTTAAAAAACACATATGCCTGGGCCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCTAGATAAGAAGTGCCCCCAAAATATATATTGAATAAAAAGCAATAAAACAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTATTTACTAACTTCTGATACAGACTCAGACAGGCACTTAGAATAACTGCCTTTAAAAGTCATGGATGTTCAAATGCCGTAATGGAACACTATTCACCAACAGAGATGTTGTGGACTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAAAGTGAGTTAGCAAATGCTGTTAGAAACTGTCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACAGTTCCATTAGTATTTGTGCCAAGTGCCACAAGTTATCTTCCTCAAGAATGAATCTGCTTTTGTGATCTTATTTGAGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTAAGGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGCTTCTAGTTTTTTTGTTTGTTTGTTGTTTTTAAATGGGGTCTTGCTCTGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGGTCTCACTGTGTTTCCCAGGCTGATCTTGTGAACTCCGGTCCGTAGTCACGCCCACCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCTTATGCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTCTTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCTATACTGTTGCCCAGGCGGTCCTAGACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATCCTATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGACCATAGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTGTAGCCTTAGAGAGGGCTGTCCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTGAGGGCCACTGAGGGTCATGGTGGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGAGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTCTTCTTTACTTACAGTGTTTTTGGTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACGGCGTGAGGGCTGCTTTTGGAACAAATTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTGAAACATTTAATGACTTTGTTCTTGTTTAAATAAGTAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATTGTAAATATTTCATTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATATTCCTTATCAAGGAAGCTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATATGATAAGTGATTGTCACCAGATGCAAAATATTGACTGTGTGTCAATACAGCTTCATGAAATTATTAACATTGCCTTGAGACAGACCTAAATGAATCAAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCCAGATAGAGATTATATAGAAGTAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTAGAAACACTTCATTTTAATTTCTTAGGGAGTGGATAGGAAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAAGACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTTTGCAACATGGGAACCACCCCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGAACGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAATCTCATGTCGGTTCCCTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTCCAGCAATTAGCCCAAAGTCCAAGTCCAAAGTCTCATCTGAGATAAAGGCCAAGATCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAAGGGCTGTAGGCCCCAAAGTCTGCAATCCAACTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCGCATCCAGCCCACTGATGCAAGTGGGCTCCCCACAACCTCATGCGAAAAGCTCTCGACCTCTGGCTCCATGCCTCATCCAGCCCACTGATGCAAGAGTGGGCTCCAGCAATCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTACCTCTCTGCTGTTTTCACAGGCTGGCGTTGGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCTGCCATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCCACTAGGCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCATAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCAGGCATTTCTATACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTGCTGTGCACCACATGTAAGCCGCCAAGGCTTAGAACTTACACTCTCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCAAGCAGCAAGGCCCTGGCCCACAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATAGGCTGCCACGTGAAGACCTTGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAAATGGGTTTTTTCTTTCTACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGGAATCAGCCAGGTCACCTGTTGAGATGCTTTGCTGTAGAAATTTCTTCCACAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAACAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCAACCATCTAACAAGTCTCTAGGAAATTTGCAAACTTTCCACTTCTTCCTGTCTTCTAGGCCCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCGAACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGTGGAGGTTAGGAAGTCAAGGTTGAGGTCCCTACATCTAGCAAGGGCTTTCTTGCTGCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAAACAAGTGTAGAGATCCTTTTATAATAAAACCATTCTCAATAACCCCTCCTTAGTAACAATGAATTATTCATTCATGGGGATAGAGCCCTTATGTGAAGCAATCATCTTTTAATGCAGCTTCTCTTCCAATACTGCCACTACAGGATTAAGTTTCCAACATGAACTTTGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCGCCGTTACAAATTAGTGAAATAATGTAGTACTTTCTCCCACAACTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTATATTTGTTAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTCTCTGTAATTATAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACAGTAGTCCTCATAACATCTCAGTAGATTCTTGGAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTATTCTGTAGATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATTATCACCAGATGAGGAGAAACAGGGTTTTGCTTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCATATTCACCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGGTGCATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTGTAAAGTATTGACAGTAATATTATAATAAAATGTCATCACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTGCCCAAGGCTTTGACTCTAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGGTATAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCCGCGCCTCATCCTATTTTCCTGTTGCTTGCTCTAGAACTCACCATCTGGTATCCAGAGTTAGGTATTGTCTTCATATTGCCTTTTCAGTGTAGAATCACCCTGTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCGGCCATCCCTTCACAACAATTAGGACTTTCACCGTTTTTAGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAGTGCTGACATTTCTGCAAACATGTGATTTTTTAAATGTATTTCATTGCAAGAATCTGGCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGAAGTTTAAAATATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTAACCAGCAATACGTAGT -3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.319873, "nblock" : 12818, "sequence_length" : 4612, "blocks_per_base" : 2.779271, "nsample" : 64395, "trim" : [ 200, 64290 ] } +5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC +5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } 2: GTTACGTATTGCTCTTGCCTGTCTAAATACAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCCAGCTACTCTCAGGGAGCTGAGGGCAGGAGGAGATCCTTAAACCCAGGGCCAGGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAATCGTTTCCGTAATTATTTTAGAAATGTAGATATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTATTTCTCTTCGATTGCCTCATGGTTTCAGCATTTGAAGTGAGTGTCTAATGAAAGCGTTCATTTGAAGATAGTACAAAACTATTTGTAATTAACTAGACCAGAGAGACCTTTGACAATATTTTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTCTGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAAGTGAGTATGCATAGTTCAAGTAGTCTATAGGATTTTCCCTAAGAATGAGGACCTTGAAATTCCTTTTAATCTTTTGATTATGCTTTATTTCGCTTAGCATTAAAATGTATAGTGAAGGAAGTTGTGGCATCGCAGGGGAGATAGGAATCTTTAAGAAGGTAATATAAAATGGAGTATGAACAAATTGGAAATCACTGCTGAAGTTAGAAAATACTAGTTTGTACATATGTAAATTACCAACTGCGATAATAAAAAATATAAATATATAGTACATAATAAAATATGCCAAATATGTTACATACACACATTTTAATTTCATAACAAAGAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTGGATTGAATATTTCACTTTTCACATTACTGCTTTCTCACAAGGATTGATAGTGTTTTCTATTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGAGTATCATTTCAGCTTTCCATCCATTTTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAAACACAAACGTTGTTGAAACTTAGAGGTAGAATAAAATATTAAATATTTCTTGCCCTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATAATATCTTTCTCCGCGGATGGTCTACTTTCTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCATTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCACATTATTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGGATTTTCATTCATTGTTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCTTGGCCTTAGGCCATGCAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTAGGCTGAATTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCCTGTGCTCTGCAGTACATAGTGCGTAGTGGCCTCAATAGCCCAGCTGCTATTGATGAGTATTGCCATACTCACATTCATATCTAAACCAGAGATGGTGATCTCTTTCTTAAGGGCCGGATAACAGACATTTTGTGCTTGTGGACCACGTAGTTTCATCTCACCTGCTTGACTCTACTGTATTGTAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTAATACAGTTCCTGCTGTCTTACTTTCAAAATACATGGCACATATTGCTCCCTACTTGGAATGGCTTTCTACTCTCACTCTTCCTGTTGCTTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAATTGTATCAGATGCCCCTGTTTTGCAACCTTAGCACCTGTCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTTGTGTTATGTTTCCCTGACTTCTGGGTGTGAGTTCTTAGAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTAGGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTCCAAAAAAAACACATATGCCTGGGCCTATATGGACTTCAGTCTGAGTGGCTACAAGGTCTTGGTGGGCATTTGCATTTCTAGAACCCCTGAATGAAGTGCCCCAAAATGTATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTGGACTGTATTCCATTTTTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGCTCAGACAGGCACTTAGAATATGCTTTGCTGGCTTTAAAAGTCATGGATGGTACAAATGCAAGCATGGGAACACTATTCACCAACAGAGATGTTGTGGTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTTGACACTGTTATTCAGAGAAAGAAAAGCCTCCTTGTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCGTGTATTTGTACCCAGAAGTGCCACAAGTTATCTTCTCAGAATGGAATCTGCTTTTGTGATCTTATTTTGAGGGGATAGACTGTAATGGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTTTAAATAGAGGCCTCTAGTTTTTTTTTGTTTTGTTTTGTTGTTTTTTTAAATGGGGTCTTGCTCTATGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCACCCAGGCCTGTCTAATTTTTTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGGCTGATCTTGAACTCCGGTCAAAGTAGTCACACTCCCACCCATCCTAAAGCACTGGGATTACAGGCAGGGAGCCTTATGCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAGCGTTTGCATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTTTAACATTCAATATGCTTAATTTCTTTTTCTTTTTTTTTTTTTTTTAATAGTGACAGAGGTCTCTTTTCTCTGTTGCCAGGCAGTCCTATGAACTCCTGACCCAAAGCCTTGGGATTACACAGACACTGGTGTCTATGCCTGGCTGATTTCTTTATAAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAGAAACGAAGTGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTTAGCCTTAGAGAGGGCTGTCCAACTTGATCTTTGGTAGAAGAGTATCCACTGCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGTCCAGATGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTATTATGTTTTTTCTTCTTTACTTACAGTGTTTTGGTTTCGTTTCAGCAGCTCCCACACATGTGTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCCTTGTTTAGTAAGTAACCACAGCTGAAAATCTTAAAGATCAGGTATATATGAAGTAATTTCAGTTTGATTAGATCATCTCTTATCTTGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAAGTCTCCTTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTAATAGAAAGGTATGACACATACACATTACATGCAGAATATGATAGAAGTGATTGTCTGGATGCAAAATATTGACTGTGTGTCCAATACAGCTTCATGAGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGGTATTCTAGGAAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAAATAGTCTAGTTTTAGTGGGGTTATAAAGTATGACGGGAGAAAAAAGAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAGAAAACTATACTAGAGCACTTCATTTAATTTCTTAGGGAGTGGATGGAAGTCAAGTAAAGACTTTAGGTAACAAATATGCCTGTGGACCTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAGGAACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGGAAACTTATAATCCCAGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAAAAATCGTCAGATCAGATGTAGACTCCCACTATCACAAGAACAGCAAGCATGGGGAGCCACCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACACACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTCACATTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTTCCAGCTTAATTAGCCCAAAATCCAAGTCCAAAGTACTCATCTGAGGGATAAAGGCCAAAGATCCCTTCCATCTATGAGACTATAAAATCAAAGGAAGTAAATTAGATTGCTTTCTAAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAGGGGCTGTAGGCCCCAGAAAGTCCTGACCAGCTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGGCTCCATGCCTCACATCCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCTTACTCTCTGCTGTTTTCACAGGCTGGCGTTGAGCCTCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCCTGCCATTCTGGGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTGAGCGGTGCCCCAGTGGGGACTGTAGGGGGTCCAACTACCCCACATTCCCCTTCTGTACTGCCCTAGTAAGGGTTCTCCACTGGGGCCTGCACCTACAGCCAGCTTCTGCCTGGACATCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAACGTTAATTCTTGATTGCTGTGCACCAGGCCCCACATATAAGCCGCCAAGGCTTAGAACTTACACTCTCTAGGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCCAAGCAGCAGGCCCTGGCCTAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATGGGCTGCCACGTGAAGACTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGGATTTCTACTCCCAGAAATGGGTTTTTTTTTCTTTCTACCTCATGGTCCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGGATATGCTTTCAGAATCAGCCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGATACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAACCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTAGCCCTCCATCCTGTTCCAACACTACACCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTGGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCACAGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAGAACAAAATTGGCAGAGTCCTTTTTTATAATAAACCATTCTCAATAACCCTCCTTGGTAACAATATTGAATTCATTCATGAGGAATGAGCCCTTAACCAGAGCAATCATCTTTTGGCTAAGCTTCTCTTCCAATACTGCCACACTACAAGTTAAAGTTTCCCAACACATGAACTTTGGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTTGTTTTGTTTTTTTTGTTTTTTCAGAGTTCTAGATAAAGCAAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTATATAGTTTCTTAGATTACAAATTGGTAAGAAATAATGTGATACACTTTCTCCCACCTTAATCAATGGATTGTGAGGGTGTAAGTTTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTTTTCATAGTAAAATCAGTTGGTGATTTGATAGCATTTATTCTTCAATTATTTTAGCTTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAAAGTTTTAGATGTTGCTAAAATAAATGTGAAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCACCAAAGTACGTAAGTCCTCACTTAACATCTCAGTAGATTCTTGGGAGTACAGCTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTAATTCTACTGTGAATGTCATGGCCCAATAAGAAAAGGACAGGGGCGGACTTACTAGGCATTTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGCTAATAGTTTGAATAGGAAAATTGGTGAGGAAATAGCTGTAGTTGTTTCCAGGTGAGCTCACTTATTCACCCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGAACATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGGAAGCATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTAACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTAACTGGCCATTTCTGCCTTTCAAAAAAATTAAATACATTACTCAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTTGCCCAAAGGGCTTTGACTCCACAAGTTTACTTTTTTTAGTAATAGTTGAGGGACGAGGAGAGGTATAGAGAGGACACAGGATAATAAGTGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTGCAAGGACTCAAGATCTATCTTCTTTTAGTGGAATGTCTACTCATTTCAGCTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCATACTCATCCTATTTTCCTGTTGCTTTGCTCTAGAACTCTGCATCTGTTATCCAGGAGTGCGTGTCTTCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCAGCCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTGACATTTCTGCAAACATGCTTGATTTTTTTAAATGTATTTCATTTGCAAGAAATCTGGCAAAAGCATTTCTCATTTTTTTTTATGTAAGTATTTTATCTGATAAAGGGGAAGTTTAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCGGACGATGAATAGACAAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAAATTAACCAGCAATACGTA 2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.175321, "nevent" : 12397, "sequence_length" : 4584, "events_per_base" : 2.704407 } 4: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCATGGTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGTATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTCACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCAAAATATATATTGAATAAAACAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTAATGTGTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAATGAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTGCAAGCATGGGGAACCACCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGGGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGTTCCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC 4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.179309, "nblock" : 12818, "sequence_length" : 4723, "blocks_per_base" : 2.713953, "nsample" : 64395, "trim" : [ 200, 64290 ] } -5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC -5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } -3: CTTCCGTTCGAGTTACGTGTTATCTTTGCCTGCAATCCATCTATCTTCGGCGTCTGCTTGGGTGACATACCCATGGAAACTATAATTTTTTTAACAATTGGAAATTCTTCAGTTTTTATATTTAACAGTTTTTGATTTTCTAACTGTGAAAATATATGGACCTGATTAGTTTTGTATATTTGCGCAATATTGGCTAACAATATTTTTCTGAATTTACTTACTAATTCTCCAGCATAGATTCTTATGGGACTGTCATATATTAATCATGCGATTATGAATATGTGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTGCTTTATTGTCCTGGCTGGAATATTTCGCACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTTAGTATTTCAACAGGTTTTTGGGAACTGGTGATGTTTGATTACATGGAATCACGGTTCTTTACTGGTGATTTGACATTTTGTTACCATCACCTGAACTTGGTATTATCCAGTGATTGTAGTCTTTTATCCATATCCTCCTCACCCGTTTCCCCAGTCCTCAAGTCCGTTAGCATCATTTGCCACCTTTTGCATCCTCATACTGATGAAGATGATGTTTGTTTCATTCCTGAGTTACTTCGCGAATGTGATCTCCATTCCATTCAAATTGCTGAAAATGCATTATTTCGTTCCTTTTTGTGGCTGGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTGATGGGCATTTGACTGGTTTTCATATTTTTTCCAATTGCAAATTGGTGCTGCTATAAACGCCATTTTGGCACTGTACATTACGTATCTATTTCGTATAATGGCTTCTTCTGGGCCAAGGTAGGTCTAAGATCTGCTTTTAGTTCTTTAAAGATCTCCTTTACGGCTAATGGTTATACTGGATTTACATTCCATCAACATTGTTAGGTGTTTTCCTTTTCACCAGTCACAACATCTGTGTTTTGATTTTTTTATTAGGGGCCATTCTTTCAGGGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTTTAATAGGTTTGAGGCCATTTATATCTTCTTTGAAATTGTCTATTCATGTCCTTAACTTTTTGATAGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAATTTTCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTAGTTGGGTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCAGAAGTCTTTTACTAACCCAATGTCGAGGTTTTTTTCAACGTTATCTTCTAGAATTTTTTTACCGGGTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTGGATCCAGTTTCATTCTTCGACATGGCAGGTTTGAGTGATGTCATTTGTTGGTCGGGTCCTTTCCCCACTTCATATTTTGTTTGTTTGTTGAGATCTTGAGATTGGCTGTACGTGTTTAGCTTTATCTCTTGGTTCTCTATTCTCTTCATTGGTCTTATGCCTGTTTTTTATACCAGTACCATGCTGTTTTTGCTGATGGTGGCCATTATAGTTTGAAGTCAAATGTAATTACCTCAATTTGTTCTTTACTTAATCTTTACTTTGGCTGGGGCCTCTTTTTGGTTCCATACCGATTTTAGGATTGTTTTTCTCATTCTGTAGAATATTAGGTAGTATTTTTGATGAGTGCATTAGATTTGTAGGTACTTTTGGCGTATATGGTCATTTCTATGTGATTTACTCATCATGAGAATGGATGTATTTCCATTTGTTGTGTATGATTTCTTTTTTTCAGCAGTGTTTTGTTGTTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAGTATAGTCAAATATATATATATATATATATATTTACGCTAATATAAAGTTGGGGATTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGGCTATAGCGGGCTACTGATTTGTGTACATTAATTTTGTATCTAGGCTTTGCTGGAATTCATTTTAACAGTTCAGGAACTTTTAGTTTGGAGTCTTTTGGGTTTCTAGGTATACGATCATATCATCAGCAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTACTCTGGCTGGGACTTTATGTTGAAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCCGCACGGGAAATGCTTTCTTTTTCCATTAAATGTCTAATGTTGTTGGCTGTAGGTTTTGTATCACAGGTGGTTTTTATTACCTTAAACGCCTTCTACGTAGATTTTACTGGGGACTTTAATCATAAAAGGATTACTGGATTTTTTTTGTCAAATATTTTTTTCTGTGTTTGTAGAGATGATCATGTGATTCTTATTTTTAATTCTGTTTTTATATTTATATCATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCCTAGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTAATACGTGGATTTGGATTCAGTTAGCTAAGTATTTTTATTGAGATTTTTGCATCGTTAATCAGTGATGGGTCTCAGTTTTATTTTTTTGTTATAATGTCCTTTCCTGGTTTTGATATTACAGTGATGCAGCTTCATTGGATGATTTAGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGGATTGGTACCAATTTTTCTTTGAATACCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAAACTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGTTGTATCTTTCAAGAATTTATCTCCTCTGAGTTTTTCGTTTATATTACGCCCACAGAGTGTCATAGTAGCCTCCGTGATCTTTTGTATTTCTGTATGCTGAATTTGTAATATCTCCCATTTCATTTTAAGTAAACTTATTTGGATCTTCTCTTTTTTTTTTTTCTTGGTTAATCTTACTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTGTTTATCTTTTTTTTTTTTTGTATATTTTTGTTTCAATTCCGGCTTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTCTGCTGGGTTTAGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGTGTGACCTTAGATTGTCTATTTATTACTTTTTCAGGGCTTTAGATGTAGGTTAATATTCTCGATTTCTATTATGTAGGTATAATGCTATAGAGATTCCTATTCTGGTGTATTTCGAGATTTGTTTTCAGATTTGGGGAGCTCCTTTGCTTGGTTTTGTAGTACTCAGTATTTGTCTGAAAAATACTATCTTCCTTCATTTATAAACTTAGTTTCCTGGATACAAATTCTTGGCTATTTGTTTAGTTTAAAGACTACCGGTAGGACCCCAATCCACTTGTCTTTGCTGTATCCCAGTTTTGATAGGTTGTGTCCTACTATTGTTCAGTTGAGATTTTTTATTTCTATCTGGTTCATTGTTCACCCAATGATTTTTTCAGGATTGTTAATTTGATGTATTTGCAATGTCTTTGAAATTTCTTTTAGAGGTTGGTTCAATCTTAATTCCTATAGTCTGACATAGTACTTGTCATTTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTAGCCTATATATATTTCTATATTAGAGGAATGTTCCATGTGCTGATGAATAAGTCTTATGTTTATTTGTTATTGCGTCTTCTCCCTTATCCCTGTAAATCCGTTGTTGTAAGGAGTGTAGTTTAAAGTACATTGTTTTTCTTTGTTAACTTTTCTATCTTGATGATCTGTATCTAGTGCTGTCATTAGATGCTAAGTCCCTATTGCTGTGTTACCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTGGGGCGCTCAGTATTAGGCACCCATGTTTAGGATTGTGATATTTTTCGTTCGTCCTTTTATCATTATAATGTCTCTCTTTGTATTTTTTACCGGCTGTTGCTTCGTTTGTTTTGTCTGATACAGAATAGTTATTCCTGCTTGCTTTTTAGTGTCCATTGCATGGGATATCTTTCTACCTTTACCGTATATGAGTCCTTAGTATTGGTGAGTCTAGTAGAGACAGTAGATACTTAGTTAGGTAATTCTCCATTCTGCCATTCTGTATCTTTTTAGGTGGAGCGTAGGCCATTTATTCAGTGTTAGTATTGAGATGGTACTATTCTATTCATCGCGATATTTGGTGCCTAGATACCTTGGTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGAGGATTAAACGCAAAAACGGAACGCCGAA -3: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.590575, "nblock" : 5778, "sequence_length" : 2399, "blocks_per_base" : 2.408504, "nsample" : 29150, "trim" : [ 200, 29090 ] } -3: TCGGTGCGCATTCAAGCCAACCCTACCTCCTTCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTCGCGCCCCTTCCGCTTGAATCGCCTTCACTAAGTATGTTGGTCCCACATGATAATTCGTAGATTGCATCGACTCCGTTTCCGAATGAACGTGGATCGGCATTTCAGTAGTAGGCTGGGGCGGATGGAAAAATCAGCGTGCCCTCTCCACAATCGATCATCCGTTTGTCGGCCGGTACGGTAGGACCAGTCGAACTACTCAACCATTACCTAGATGAGGAATCCGTTGATTTTGCATCGTTGGGATCAGTTGGTAAATTCAATAGAATAGTTGTCCTAGACAGGTTGATGGATGGGAGAACAAAGCGGGGCCATGGGCGGGATAATGGGCGGTTGGAAATGGGATACAGCTCCATTCAGCCCTACACTTCCATTCCTCGTATGCTACGATGAATCAGGCCATGCATATCGCTTTTATTGGCCATCAGTATAATTCCAGCCTACCGATATCGATCCATCCTAATTAAGTAGGTGGCTCTCAATGGATCAAGAGATTTAAACATCACAGGTAGGATGATCGTCAGGACTCAGACCTTCAGGAATAATCATGCGCCACCTCCTTTCACATGTCATTCAGTGTGGTATGGTAGGGTAAAATCACCTTCATTCGTACTTGCCTTCAGGCGATTTCAGATAGGTTTGAAACGAATCTGTTGGTATCGGACGAAAATTGGATCAACATACATCAGTAAACTGCATTCCGCTCGACATAGCTCTGGACTTTAGCATAGATACATTAGGCTGGCATGAATTGTGGGAGGAGCCCTCGGAATGGACTTGTCTGGGAGAATTTGAGATCCTAAAAGTGAGATGGCACTACTCTACTCCTCGTCGATGGATCCGCTTGTACAATACAATCCAATTTCTAGATGAATGAAATAGTAGGTGGTTGTGGGCCAGCATGGAGCAGGACCCTTCACTACAGCCACCTCCGATGCGGGGTTCATTGAGGTGCATTCTGCGTGCCTCTGTCGTGCAGGTACCTTAATAAGCCGGGAGGCATTTCAAAGCTGAATCAGGAGGTAAAAATGAGTAGGATTTTAAGCCGCCGAATGGGAAGAACATCCTCTCGTTACCGGCGCAGAATGCACTTCCTGCCGGCCAGGCCAGTCAAAATGTACGCCAGCCAGGAATCAGGAATAAAGACTCAGTCAGTGAACGGCGAGCCCGCGCTGTGCTTCCGCCACAGTGGTAGAAAAACGTCCAGGATCAAATTACGTATTTCAATTCCGTGGAACAATTTGAAAGGCTAAAGCCTAGTAAAATTCAACTGGACGGACAGAGCCCGGAAAAAGCCTCCCTACCCCACTTCAAAGCGGAATGAACGCGGGCTCAAACCCTACAAAATCGCGTATTAAGTAACATTTCGCCCGTACTACACTATCAATCAGCCATTACCTCCGTAAAATACCAAATAGGTGAGAAAATTTGCATCCGCCATCGTACAGCCATCAAATTAGCCCACTCAAAATGGAATTTTGGATGAAAAAGGTATCATTCGACTCACCCCCTTACTTAATATTACGCTGCTCGCGTAAATATTTCCCTTTATACCATCCCAATGCATGCCCAATGCTTAGCATCATGTATTTCGACTCAACACCCACCATGCGCGATGGCGTAAATATAGAAACCAGATACGAGATTTCAGGCATGCCACGCCAGCGGTCAGTATAAACCGGGCAAAATCAAATAGCCGCCAGGCTCCGGACGGTGAGGCGAGATACCGGGTAGATGGGCTGGCGCGCTACATACTCCCAGAAATAGGGCATGGAAGCGCTCCATCGGCGCGATACCAAGATGGGCCGGCACCACTTCACGCCAGCATCTAAATTTTGCCTCGATAAAAGAAATCGTCCCCGACGGTACCGACCCATGAACAGGCATTTTGTTGCCCCGTCGCGCTTGCCACCCATTCCAAAATAGGTGGCGCCAGTACGAAGCGGGCTGAGCTAAACGCGCGCACCGCTCAATGAATCGCATCATCAGCCTTCATCCTCGTACCAGATACCATGGCCTCCTCCACAGCCCGAAAATAGCAAATATCCCTTCAATATGCGCTGATGGGCTGGAAACAGTATGAATAGGCGGGCGGGCCAATGGAATGGCTATCAACAGCCAGCGAATGAACCGCTTCCAATAGGTAGAGCTAAATGCGCGGAGAAATTTGGCCTCCCGTACCGGCCAAACCTAATCAAAATTCTCCTTCGACGGGCAGCTACAGGCGAACAGCGCCAGTGAAAAACATGCGGAGCGGATGGGGTCCGTATCGCTTCGACGAAACTGCCTCCAGCAGGAAAATCAGCTGTCTCATGAAGCGGTGCGCATGAAA - 2/19 Test #3: test_raw_call .................... Passed 12.34 sec +2: ATTTTTTTAACAATTGGAAATTCAGTTTTTTGTATTTAACGAATTTTTTTATTTTCTAACTGTGAAAATATATTGGACGGTCGTTTTGTATATTTGGCATATTATTTGTAATATTTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTGTATATTAATCATGCGATTATGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTGCTTTATTGTCCTGGCTGAATATTCTTTACTGTTGGATGGAAGGATGTTAATGACATCAAATATCTTGTTAAGATCTCAATTGCAAGATTTTATATTGTATTATTTTTTTAGTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTCTTTACTGGTGATTTGACATTTTGTACCTGTCACCTGAGCAGTATTATCAGTGGTAGTCTTTTATCATATCATCTCTTGTTCCCCAAATTATCAAGTCCGTGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGATGATGTTTGGTTTTCATTCTAGAGTTACTTCATGATAATGATCTCCAAATTCCATTCAAATTTGCTGAAAATGCATTATTTCGTTCCTTTTGTGGCTGGTAATATTCCATAGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGAGCTGGTTTTCATATTTTTTCAGGTACAGAATTGCTGCTATAAACATTTATTTTCATTACGTAATCTATTTCGTATAATGACTATTCTGGGCCAAAGGTAGGTCTAAAAGATCTGCTTTTAGTTCTTTAAGATCTCCACACCTTTACATTAATGGTTATACTAGTTTACATTCCCATCAATATTCTTAAATTGTTTCCTTTTCACCAATCACCAACATCTATTGTTTTGATTTTTTTATTAGGGGCCGTTCTTTCAGGGTGAGTGGTATCCCACTGTGGTTTTTTGATTTACATTTCCCTGATCATTAGTGATGTTGGGCATTTTAATACAGGCCATTTATATCTTCTTTGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTCTCCATCTCTGTCAGGTTGTCGTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTTCTTGGTCGCGAAGTCTTTTGCCTAATAACCCAATGTCTCTAGAAGGTTTTCAACGTTATCTTCTAGAATTTTTTTATAGGGTTTCATCTTAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTTGTATAAGGTGAGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCAGGTTACCAATTCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTGTTGAGGATCAGTTGGCTGTAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATGCCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAATGTGATGCCTCCAATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGAATGATGGTGGTATTTTTTGATGAGGAATTGCATTAGTTGTAGGTACTTTTGGCAGTATGGTCATTTTCACAATATTGATTTACTCATCCATGAGATAGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTGCAGCTAATGTAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCGCCTTATACTTGAGGCTACTGATTTGTGTACATTAATTTTGTATCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTGGGTTTTCTAGGTATACGATCATATCATCCTTAAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCGCACGGGAAATGCTTTCTTTTCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTATCACAGGTGGTTTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGATGCTGGATTTTTTGTCAAATATTTTTTTTCTGTGTTTGTGAGATGATCATGTGATTCTTGTTTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGATTTTTTGCATCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTTGTTATATGTCCTTTCCTGGTTTTGATATTACAGTGATACTGCTTCATTGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAGCTAGGATTGGTACCAATTTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCACAAACTATTTTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGGTTGTATCTTTCCAGGAATTTATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTGAGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTTGTTTTATCTTTTGTATGTTTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTTTCTGCTGGGTTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATTTATGTAGGTAATGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCACAGAAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTAGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCAGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAATTTTTTTACATTTCTATCCTGATTTCATTGATGCCCAATGATTTTCTAGGAAGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTTGGGGTTGATTTCCAATCTTAATTCCTGTAGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCTGTATATATTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTGCATTTGTTGAATCTTCTCCACATATCCTGTAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCATTGGGTACTGAAGTCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTCCTGGATTCGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTTTACCGGCTGTTGCTTTAAGTTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTAGTGTCCATTTGCATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTAGTGAGTCTAGTAGAGACAGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTTAAGTGGAGCATTTAGGCCATTTACATTCAGTGTTAGTATTGAGATGAGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTTTTTTTAAATCATTGCATTATTGTTTTATAAGATCCTGTGAGAGGTTAAACGCAAAACAGACGCCGAAGACT +2: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.459646, "nevent" : 5787, "sequence_length" : 1694, "events_per_base" : 3.416175 } +2: CTCAGTGCATTAACCAACCTACCTTCAATGCTCCACCATCCAGCCTCGGTAATAATTACGCGCCCCTTCCCTTGAATCACCTTCACTAAAAGCCATGTTGAATCCCACAATGTAGGCCATCAGCTCAGGAAATAGAACATCAGCATGGGAGGTAGTAAGGCAGATGAAAAAATCATGCCTCTCATCAGTGCCAGTAGAATGACTCATTTCTCAATACCTAAAATAAAGAAATCGATGATTTACATGAGATCAGAATGGGCCGTAACAAACAGGTGCTCTGACAGGTGCCCAATCGATAGAGAACAAAGCAGGGAATAATGACTGGTTGACCAGAGCCAATCCTTCCATTCAACCCTACACTATTCCAATGATATTGTCACATATCACTTGTGTGCCATCAATATATTCAACACTTCTCCAATCCATATGGCCAACCAGATCAAAGGTGGCATCACAAGCCAAGGCCGGTGTCAGGAATTTCAGACCAAATATCATGCCTTCATTCAGTAGGTAGCGTATCTGCCGCTGTAAAATCAGACAAAGCCAGATCCGCCATAATGCTTCCTTCCACTCGGCCTCACTTCTCATCATTAAACCTCAGGCATGCCGAAATGGAACATGGAGCCCTAAAATGAATAGCCTCATCAGTGGGTAATCCCACTGTCATCTAATCAAAGGCCCCATACATTCATCAGAATAGAAATGGTGGTGGCATGGAACCCTTCTGAACAACATCTCAAATGCAGTGCTTCAATGAAGTAAACCTGCTCATAGGAGGCAGCTAAGCTAAAATCAGGAAAATTGCATGGTTACAAGCCCGCCGAAATGAATACAAAGCGCAAACCACTACCAGCCCCAGAATAATCAATAAATATACATAGCCAGAATCGAATAAGTCAGTATGACGCCGCGCTTCAATAGTAGCAATCAGATCAGCATTATTTATCCTTCAATCCAATAGGAAATTCCTTCAAATGCTAGACGGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAATGAGCTCAATCTCCATATTAATGCTTCATTGCCATCTCCACTATCATCCTTATTATTCTCAATAAAACCATAAACAAGTGAGGCCCATCCATAAATAAATGCAGCCATCCAGATAGCCTCAAAATAAGGCTGAGTATCATTCATTCACCCCTTGCCAATATTCTCATCCTTCCCTTCTCCATCCCAGCCATGCCATCTTAACATCGCTCAGCATTTTGATAGCGTAAATAGATAGGTCAATTTCAGAGCAGTCAAAATAAATAGGCTGGAAATCAAATGTGAGGCAGATGCCAGTGGAATGGTGGGCGCTCCATTGACACCACTTCCTCCAGCTCAATTTTCTCGATAAAAGAAATCGATCTGAACAATTTTGTTGCCCGTCGCTTATTCCAAATAGTGGCGCTGACTAAACACCGCTCAATGAATCATCATCAACCTTCTACTCGTACCAGATGCCTCATCAGCCAAAATCAAATATCCTTCAATAAGTGGGCAGTATGAATGGTGGGCCAATGGTACTATCAGCCAGAATGTTCTTCGAAAATAGTGACCTAAATGGAAAATTTGGCCTCGTACCAGTAAATAAATTCTGACGAGCATCAGTGAAAAAAACATGTAGACGGATGGGTCGGCTGCCTCCAGCATTTCCATCTCATGAAGCGGGCGCATGAAA + 3/19 Test #2: test_events_call ................. Passed 13.36 sec test 8 Start 8: test_event_table @@ -4039,6 +4079,8 @@ 8: 1948 10010 0.000000 0.000000 1073217039 8: 1949 10017 -0.000000 -0.000000 1072716772 8: 1950 10023 -0.000000 -0.000000 1073278246 +5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } 8: 1951 10027 0.000000 0.000000 1072094941 8: 1952 10030 0.000000 -0.000000 1072968977 8: 1953 10034 -2.000000 0.000000 1072876525 @@ -4700,6 +4742,14 @@ 8: 2609 13359 0.000000 -0.000000 1072851428 8: 2610 13370 -26815615859885194199148049996411692254958731641184786755447122887443528060147093953603748596333806855380063716372972101707507765623893139892867298012168192.000000 -0.000000 1073971139 8: 2611 13374 26815615859885194199148049996411692254958731641184786755447122887443528060147093953603748596333806855380063716372972101707507765623893139892867298012168192.000000 -0.000000 1073097661 +5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG + 4/19 Test #5: test_rawrgrgr_r941_call .......... Passed 13.47 sec +test 9 + Start 9: test_mappy + +9: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "mappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" +9: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 +9: Test timeout computed to be: 10000000 8: 2612 13381 -0.000000 -2.000000 1073300522 8: 2613 13385 0.000000 26815622286656136188991222979555800299151569232645342766997438189017385791793967193890341626029369489029278308326735796577682416491009286055324954960855040.000000 1073703646 8: 2614 13390 -0.000000 2.000000 1071143500 @@ -14485,13 +14535,13 @@ 8: 12394 64075 0.000000 0.000000 1072576662 8: 12395 64078 -2.000000 -0.000000 1073238564 8: 12396 64083 0.000000 -2.000000 1072952450 - 3/19 Test #8: test_event_table ................. Passed 0.22 sec -test 9 - Start 9: test_mappy + 5/19 Test #8: test_event_table ................. Passed 0.20 sec +test 10 + Start 10: test_seqmappy -9: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "mappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" -9: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 -9: Test timeout computed to be: 10000000 +10: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" +10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 +10: Test timeout computed to be: 10000000 9: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa (score = nan) 9: idx signal pos base current sd dwell 9: 0 182.803436 0 C 0.041604 0.315691 0.652851 @@ -78889,24 +78939,13 @@ 9: 64392 59.267578 0 C 0.041604 0.315691 0.652851 9: 64393 58.711945 0 C 0.041604 0.315691 0.652851 9: 64394 57.415466 0 C 0.041604 0.315691 0.652851 - 4/19 Test #9: test_mappy ....................... Passed 0.59 sec -test 10 - Start 10: test_seqmappy - -10: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" -10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 -10: Test timeout computed to be: 10000000 -4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } -4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG - 5/19 Test #4: test_rawrgrgr_r94_call ........... Passed 13.78 sec + 6/19 Test #9: test_mappy ....................... Passed 0.53 sec test 11 Start 11: test_squiggle_r94 11: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "squiggle" "--model" "squiggle_r94" "/build/reproducible-path/scrappie-1.4.2/reads/test_squiggles.fa" 11: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 11: Test timeout computed to be: 10000000 -6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 11: #one 11: pos base current sd dwell 11: 0 T -0.010010 0.502174 1.176593 @@ -79033,8 +79072,6 @@ 11: 121 C 0.524076 0.089829 7.726254 11: 122 C 0.264877 0.112331 7.119059 11: 123 T 1.076214 0.227470 6.295975 -2: ATTTTTTTAACAATTGGAAATTCAGTTTTTTGTATTTAACGAATTTTTTTATTTTCTAACTGTGAAAATATATTGGACGGTCGTTTTGTATATTTGGCATATTATTTGTAATATTTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTGTATATTAATCATGCGATTATGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTGCTTTATTGTCCTGGCTGAATATTCTTTACTGTTGGATGGAAGGATGTTAATGACATCAAATATCTTGTTAAGATCTCAATTGCAAGATTTTATATTGTATTATTTTTTTAGTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTCTTTACTGGTGATTTGACATTTTGTACCTGTCACCTGAGCAGTATTATCAGTGGTAGTCTTTTATCATATCATCTCTTGTTCCCCAAATTATCAAGTCCGTGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGATGATGTTTGGTTTTCATTCTAGAGTTACTTCATGATAATGATCTCCAAATTCCATTCAAATTTGCTGAAAATGCATTATTTCGTTCCTTTTGTGGCTGGTAATATTCCATAGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGAGCTGGTTTTCATATTTTTTCAGGTACAGAATTGCTGCTATAAACATTTATTTTCATTACGTAATCTATTTCGTATAATGACTATTCTGGGCCAAAGGTAGGTCTAAAAGATCTGCTTTTAGTTCTTTAAGATCTCCACACCTTTACATTAATGGTTATACTAGTTTACATTCCCATCAATATTCTTAAATTGTTTCCTTTTCACCAATCACCAACATCTATTGTTTTGATTTTTTTATTAGGGGCCGTTCTTTCAGGGTGAGTGGTATCCCACTGTGGTTTTTTGATTTACATTTCCCTGATCATTAGTGATGTTGGGCATTTTAATACAGGCCATTTATATCTTCTTTGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTCTCCATCTCTGTCAGGTTGTCGTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTTCTTGGTCGCGAAGTCTTTTGCCTAATAACCCAATGTCTCTAGAAGGTTTTCAACGTTATCTTCTAGAATTTTTTTATAGGGTTTCATCTTAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTTGTATAAGGTGAGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCAGGTTACCAATTCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTGTTGAGGATCAGTTGGCTGTAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATGCCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAATGTGATGCCTCCAATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGAATGATGGTGGTATTTTTTGATGAGGAATTGCATTAGTTGTAGGTACTTTTGGCAGTATGGTCATTTTCACAATATTGATTTACTCATCCATGAGATAGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTGCAGCTAATGTAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCGCCTTATACTTGAGGCTACTGATTTGTGTACATTAATTTTGTATCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTGGGTTTTCTAGGTATACGATCATATCATCCTTAAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCGCACGGGAAATGCTTTCTTTTCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTATCACAGGTGGTTTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGATGCTGGATTTTTTGTCAAATATTTTTTTTCTGTGTTTGTGAGATGATCATGTGATTCTTGTTTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGATTTTTTGCATCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTTGTTATATGTCCTTTCCTGGTTTTGATATTACAGTGATACTGCTTCATTGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAGCTAGGATTGGTACCAATTTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCACAAACTATTTTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGGTTGTATCTTTCCAGGAATTTATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTGAGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTTGTTTTATCTTTTGTATGTTTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTTTCTGCTGGGTTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATTTATGTAGGTAATGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCACAGAAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTAGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCAGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAATTTTTTTACATTTCTATCCTGATTTCATTGATGCCCAATGATTTTCTAGGAAGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTTGGGGTTGATTTCCAATCTTAATTCCTGTAGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCTGTATATATTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTGCATTTGTTGAATCTTCTCCACATATCCTGTAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCATTGGGTACTGAAGTCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTCCTGGATTCGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTTTACCGGCTGTTGCTTTAAGTTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTAGTGTCCATTTGCATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTAGTGAGTCTAGTAGAGACAGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTTAAGTGGAGCATTTAGGCCATTTACATTCAGTGTTAGTATTGAGATGAGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTTTTTTTAAATCATTGCATTATTGTTTTATAAGATCCTGTGAGAGGTTAAACGCAAAACAGACGCCGAAGACT -2: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.459646, "nevent" : 5787, "sequence_length" : 1694, "events_per_base" : 3.416175 } 11: 124 G -0.689325 0.170158 8.711826 11: 125 T 0.898852 0.192461 7.121980 11: 126 G -0.370243 0.104369 8.615685 @@ -81429,8 +81466,10 @@ 11: 2515 A -0.423683 0.118825 7.145897 11: 2516 T 1.096181 0.195750 7.263323 11: 2517 G -0.216749 0.161250 7.357252 -2: CTCAGTGCATTAACCAACCTACCTTCAATGCTCCACCATCCAGCCTCGGTAATAATTACGCGCCCCTTCCCTTGAATCACCTTCACTAAAAGCCATGTTGAATCCCACAATGTAGGCCATCAGCTCAGGAAATAGAACATCAGCATGGGAGGTAGTAAGGCAGATGAAAAAATCATGCCTCTCATCAGTGCCAGTAGAATGACTCATTTCTCAATACCTAAAATAAAGAAATCGATGATTTACATGAGATCAGAATGGGCCGTAACAAACAGGTGCTCTGACAGGTGCCCAATCGATAGAGAACAAAGCAGGGAATAATGACTGGTTGACCAGAGCCAATCCTTCCATTCAACCCTACACTATTCCAATGATATTGTCACATATCACTTGTGTGCCATCAATATATTCAACACTTCTCCAATCCATATGGCCAACCAGATCAAAGGTGGCATCACAAGCCAAGGCCGGTGTCAGGAATTTCAGACCAAATATCATGCCTTCATTCAGTAGGTAGCGTATCTGCCGCTGTAAAATCAGACAAAGCCAGATCCGCCATAATGCTTCCTTCCACTCGGCCTCACTTCTCATCATTAAACCTCAGGCATGCCGAAATGGAACATGGAGCCCTAAAATGAATAGCCTCATCAGTGGGTAATCCCACTGTCATCTAATCAAAGGCCCCATACATTCATCAGAATAGAAATGGTGGTGGCATGGAACCCTTCTGAACAACATCTCAAATGCAGTGCTTCAATGAAGTAAACCTGCTCATAGGAGGCAGCTAAGCTAAAATCAGGAAAATTGCATGGTTACAAGCCCGCCGAAATGAATACAAAGCGCAAACCACTACCAGCCCCAGAATAATCAATAAATATACATAGCCAGAATCGAATAAGTCAGTATGACGCCGCGCTTCAATAGTAGCAATCAGATCAGCATTATTTATCCTTCAATCCAATAGGAAATTCCTTCAAATGCTAGACGGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAATGAGCTCAATCTCCATATTAATGCTTCATTGCCATCTCCACTATCATCCTTATTATTCTCAATAAAACCATAAACAAGTGAGGCCCATCCATAAATAAATGCAGCCATCCAGATAGCCTCAAAATAAGGCTGAGTATCATTCATTCACCCCTTGCCAATATTCTCATCCTTCCCTTCTCCATCCCAGCCATGCCATCTTAACATCGCTCAGCATTTTGATAGCGTAAATAGATAGGTCAATTTCAGAGCAGTCAAAATAAATAGGCTGGAAATCAAATGTGAGGCAGATGCCAGTGGAATGGTGGGCGCTCCATTGACACCACTTCCTCCAGCTCAATTTTCTCGATAAAAGAAATCGATCTGAACAATTTTGTTGCCCGTCGCTTATTCCAAATAGTGGCGCTGACTAAACACCGCTCAATGAATCATCATCAACCTTCTACTCGTACCAGATGCCTCATCAGCCAAAATCAAATATCCTTCAATAAGTGGGCAGTATGAATGGTGGGCCAATGGTACTATCAGCCAGAATGTTCTTCGAAAATAGTGACCTAAATGGAAAATTTGGCCTCGTACCAGTAAATAAATTCTGACGAGCATCAGTGAAAAAAACATGTAGACGGATGGGTCGGCTGCCTCCAGCATTTCCATCTCATGAAGCGGGCGCATGAAA - 6/19 Test #2: test_events_call ................. Passed 13.98 sec +4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } +4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG + 7/19 Test #4: test_rawrgrgr_r94_call ........... Passed 14.12 sec test 12 Start 12: test_squiggle_r10 @@ -84944,6 +84983,988 @@ 12: 2523 T -0.083219 0.260580 7.076826 12: 2524 A -1.159863 0.143544 8.895534 12: 2525 T -0.833608 0.215293 6.887578 +11: 916 C 0.063825 0.125462 7.512209 +11: 917 T 1.840280 0.175977 7.643038 +11: 918 C 0.707252 0.141712 6.249586 +11: 919 A -0.822295 0.153949 5.953277 +11: 920 G -1.540942 0.179104 7.235775 +11: 921 T 1.612700 0.223841 8.964562 +11: 922 C 0.157601 0.110420 8.440152 +11: 923 T 0.846587 0.188435 8.496645 +11: 924 G -0.585456 0.158580 8.036791 +11: 925 T 0.628798 0.207530 6.067406 +11: 926 A -0.256176 0.089209 7.377668 +11: 927 C -0.420045 0.110749 6.293062 +11: 928 T 0.484288 0.108847 9.392953 +11: 929 T 1.166681 0.131052 6.982608 +11: 930 C 0.192637 0.114694 9.466203 +11: 931 A -1.030271 0.169038 5.564999 +11: 932 T 0.611005 0.134539 7.448565 +11: 933 T 0.751640 0.175736 6.470249 +11: 934 G -0.921620 0.182297 7.810210 +11: 935 T 1.481857 0.175810 6.468983 +11: 936 C 0.598783 0.096961 8.987575 +11: 937 C 0.145590 0.100883 6.445328 +11: 938 A -0.328470 0.132785 6.627022 +11: 939 T 0.979774 0.220966 7.409958 +11: 940 A -0.350028 0.131535 8.122538 +11: 941 T 1.850830 0.175986 9.072439 +11: 942 C 0.406064 0.109313 10.519147 +11: 943 A -0.085994 0.091982 7.867312 +11: 944 C 0.474466 0.116339 6.530051 +11: 945 T 1.035715 0.212156 7.980183 +11: 946 A -0.358180 0.143839 8.727435 +11: 947 T 2.046100 0.176574 9.244362 +11: 948 C 0.792244 0.141820 8.443170 +11: 949 A -0.607108 0.127389 6.601569 +11: 950 A -0.150923 0.108343 8.828105 +11: 951 C 0.544954 0.155957 8.631912 +11: 952 A -1.011888 0.147396 6.354394 +11: 953 T 0.278774 0.128079 6.910552 +11: 954 T 0.085044 0.090066 6.676260 +11: 955 T 0.477759 0.084808 10.698875 +11: 956 T 0.712612 0.134527 6.732134 +11: 957 G -0.893493 0.157883 8.310082 +11: 958 G -1.736484 0.183551 8.384995 +11: 959 T 1.374018 0.198607 7.557854 +11: 960 C 0.384994 0.125086 7.562732 +11: 961 A -0.809379 0.118107 7.985712 +11: 962 G -0.567025 0.130280 9.312629 +11: 963 C 1.031547 0.133259 10.060877 +11: 964 C 0.178953 0.136052 10.487834 +11: 965 A -0.699117 0.177444 14.229403 +11: 966 T 1.496983 0.337204 14.005887 +11: 967 C 0.134729 0.513955 15.303130 +11: #three +11: pos base current sd dwell +11: 0 A -0.311295 0.287155 1.060577 +11: 1 A -0.327334 0.232119 2.359596 +11: 2 C 0.603081 0.167501 4.553012 +11: 3 T 1.068943 0.205845 7.595290 +11: 4 A -0.793031 0.164284 5.658216 +11: 5 T 0.433380 0.137665 6.946334 +11: 6 T 0.436306 0.088829 6.877754 +11: 7 T 0.693068 0.143372 8.926639 +11: 8 G -0.492321 0.133119 8.557684 +11: 9 T 0.717162 0.193908 7.400294 +11: 10 A -0.617759 0.132158 7.201999 +11: 11 G -0.878187 0.124711 9.196579 +11: 12 T 0.947013 0.203710 9.156119 +11: 13 A -0.494671 0.119469 9.243031 +11: 14 A -0.288858 0.091152 9.829244 +11: 15 C 0.680011 0.103200 9.070368 +11: 16 T 1.186782 0.161338 10.167329 +11: 17 A -0.229526 0.150680 8.783631 +11: 18 G -1.543017 0.128617 8.864950 +11: 19 A -0.669718 0.137331 6.963716 +11: 20 C 1.077298 0.118840 8.659659 +11: 21 C 0.716389 0.104120 7.157910 +11: 22 A -0.281692 0.126018 7.745483 +11: 23 G -0.995533 0.116596 7.121201 +11: 24 A -0.793298 0.090393 9.616691 +11: 25 G -0.853261 0.108390 8.010864 +11: 26 A -0.950247 0.112232 7.616065 +11: 27 G -1.594940 0.127209 8.201823 +11: 28 A -0.352522 0.133524 6.977513 +11: 29 C 0.998388 0.153742 8.300368 +11: 30 A -0.489483 0.116936 8.998850 +11: 31 A -0.342366 0.105625 6.557430 +11: 32 C 0.639107 0.099587 9.183333 +11: 33 T 0.840784 0.181029 6.268268 +11: 34 G -0.987463 0.162989 7.309312 +11: 35 A -0.797785 0.119460 8.223274 +11: 36 C -0.203289 0.124986 6.670275 +11: 37 T 0.842711 0.109019 7.920112 +11: 38 T 0.860292 0.154840 5.673094 +11: 39 A -0.474664 0.111263 7.048129 +11: 40 A -0.441547 0.140034 5.195979 +11: 41 T 1.299606 0.300615 6.987378 +11: 42 A -0.776949 0.154347 6.423832 +11: 43 T 0.457373 0.123936 8.523569 +11: 44 T 0.128682 0.089760 8.039407 +11: 45 T -0.013175 0.092535 7.872333 +11: 46 T -0.122870 0.090170 8.940784 +11: 47 T 0.212840 0.096390 7.659600 +11: 48 T 1.058062 0.139666 8.839641 +11: 49 C -0.087328 0.127199 7.402436 +11: 50 T 1.432613 0.175712 6.858563 +11: 51 C 0.453460 0.110582 7.645921 +11: 52 T 1.289622 0.159644 8.076051 +11: 53 A -0.086664 0.137443 6.426461 +11: 54 A -0.694792 0.100774 7.527868 +11: 55 G -0.628657 0.110919 6.207596 +11: 56 C 0.191094 0.116478 7.916062 +11: 57 T 0.950039 0.150436 9.387542 +11: 58 G -0.243735 0.099546 6.341496 +11: 59 C 0.564169 0.102857 7.769516 +11: 60 T 0.993951 0.181703 6.818446 +11: 61 A -0.567735 0.123331 7.917033 +11: 62 A -0.238808 0.109318 7.887733 +11: 63 C 0.800703 0.109093 6.718105 +11: 64 C 0.516168 0.114472 7.309620 +11: 65 T 1.326329 0.194370 8.059374 +11: 66 A -0.538099 0.116265 8.736328 +11: 67 A -0.751151 0.115656 10.284049 +11: 68 T 1.277648 0.245332 10.568602 +11: 69 G -0.577284 0.149425 8.892444 +11: 70 T 0.714135 0.196311 8.559086 +11: 71 A -0.192810 0.083880 8.774265 +11: 72 C 0.138676 0.101537 6.545554 +11: 73 T 0.811800 0.137296 8.140513 +11: 74 G 0.031256 0.094394 7.527188 +11: 75 C 0.683478 0.136764 6.762471 +11: 76 A -0.352385 0.137659 7.671053 +11: 77 G -1.017901 0.120881 6.958473 +11: 78 A -0.777106 0.087390 7.779403 +11: 79 G -1.131899 0.118075 6.196393 +11: 80 G -2.042570 0.129558 8.701298 +11: 81 A -1.472161 0.189288 6.884301 +11: 82 T 1.796727 0.240129 10.444687 +11: 83 C -0.239306 0.149709 6.722317 +11: 84 T 0.499985 0.104497 9.804369 +11: 85 T 0.578016 0.116127 6.285883 +11: 86 G -0.106692 0.085170 8.264076 +11: 87 C 0.298300 0.114580 6.364541 +11: 88 A 0.101089 0.097941 6.576874 +11: 89 C 0.460653 0.126640 7.942255 +11: 90 A -0.289885 0.126268 7.702404 +11: 91 T 1.043450 0.210441 10.152841 +11: 92 A -0.308771 0.131024 10.039814 +11: 93 T 1.302650 0.227240 8.882949 +11: 94 G -0.487459 0.160952 8.942453 +11: 95 T 0.789376 0.229197 9.613733 +11: 96 A -1.168307 0.143036 8.135337 +11: 97 T 0.661117 0.123481 8.449583 +11: 98 T 1.155030 0.145458 6.392059 +11: 99 C 0.092390 0.106948 9.148997 +11: 100 T 0.985125 0.153691 9.044989 +11: 101 G -0.247703 0.154500 8.848049 +11: 102 G -1.014492 0.106061 8.258709 +11: 103 G -1.184761 0.103394 8.056440 +11: 104 G -1.319439 0.107505 7.331498 +11: 105 A -1.036467 0.110077 5.784654 +11: 106 A -1.056986 0.095197 8.206622 +11: 107 A -0.565708 0.124007 5.991297 +11: 108 T 1.484228 0.215328 8.345864 +11: 109 A 0.150776 0.160757 7.723990 +11: 110 A -0.816787 0.103474 7.844548 +11: 111 A -0.906660 0.111718 7.720866 +11: 112 T 1.286759 0.222001 7.826367 +11: 113 G -0.122856 0.105182 7.148987 +11: 114 C 0.420061 0.111284 6.892807 +11: 115 T 0.879590 0.175035 7.003581 +11: 116 A -0.216872 0.124569 7.107498 +11: 117 T 1.092199 0.186470 9.339549 +11: 118 A 0.248259 0.099826 7.283923 +11: 119 C 0.945592 0.130304 8.494405 +11: 120 A -0.334757 0.158163 9.209718 +11: 121 G -1.521101 0.124264 9.940014 +11: 122 A -1.659791 0.181810 7.611416 +11: 123 T 0.412108 0.133158 11.167106 +11: 124 T 0.117274 0.089290 8.302005 +11: 125 T 0.481561 0.084759 8.384224 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-1.356598 0.134774 7.216632 +11: 593 T 0.687378 0.128863 7.542632 +11: 594 T 0.776496 0.146885 8.516951 +11: 595 G -0.528327 0.134746 7.763270 +11: 596 T 0.895498 0.173567 9.419250 +11: 597 A -0.184997 0.154039 7.477814 +11: 598 A -0.961465 0.102563 9.379383 +11: 599 G -1.548730 0.173882 8.797525 +11: 600 T 1.606542 0.270099 8.372373 +11: 601 C 0.056409 0.138974 9.062668 +11: 602 T 0.865641 0.192260 9.394818 +11: 603 G -0.348534 0.163240 9.530728 +11: 604 C 0.161046 0.266937 15.063374 +11: 605 T 0.194787 0.502125 16.019983 + 8/19 Test #11: test_squiggle_r94 ................ Passed 0.23 sec +test 13 + Start 13: test_licence + +13: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "license" +13: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 +13: Test timeout computed to be: 10000000 12: 927 C -0.836542 0.154324 7.840771 12: 928 T 0.824620 0.159619 7.303357 12: 929 T 1.516868 0.156615 7.500086 @@ -87555,1654 +89241,7 @@ 12: 603 G -0.572062 0.335164 12.230327 12: 604 C 0.561030 0.467363 9.792212 12: 605 T -0.235200 0.581865 6.671800 -11: 916 C 0.063825 0.125462 7.512209 -11: 917 T 1.840280 0.175977 7.643038 -11: 918 C 0.707252 0.141712 6.249586 -11: 919 A -0.822295 0.153949 5.953277 -11: 920 G -1.540942 0.179104 7.235775 -11: 921 T 1.612700 0.223841 8.964562 -11: 922 C 0.157601 0.110420 8.440152 -11: 923 T 0.846587 0.188435 8.496645 -11: 924 G -0.585456 0.158580 8.036791 -11: 925 T 0.628798 0.207530 6.067406 -11: 926 A -0.256176 0.089209 7.377668 -11: 927 C -0.420045 0.110749 6.293062 -11: 928 T 0.484288 0.108847 9.392953 -11: 929 T 1.166681 0.131052 6.982608 -11: 930 C 0.192637 0.114694 9.466203 -11: 931 A -1.030271 0.169038 5.564999 -11: 932 T 0.611005 0.134539 7.448565 -11: 933 T 0.751640 0.175736 6.470249 -11: 934 G -0.921620 0.182297 7.810210 -11: 935 T 1.481857 0.175810 6.468983 -11: 936 C 0.598783 0.096961 8.987575 -11: 937 C 0.145590 0.100883 6.445328 -11: 938 A -0.328470 0.132785 6.627022 -11: 939 T 0.979774 0.220966 7.409958 -11: 940 A -0.350028 0.131535 8.122538 -11: 941 T 1.850830 0.175986 9.072439 -11: 942 C 0.406064 0.109313 10.519147 -11: 943 A -0.085994 0.091982 7.867312 -11: 944 C 0.474466 0.116339 6.530051 -11: 945 T 1.035715 0.212156 7.980183 -11: 946 A -0.358180 0.143839 8.727435 -11: 947 T 2.046100 0.176574 9.244362 -11: 948 C 0.792244 0.141820 8.443170 -11: 949 A -0.607108 0.127389 6.601569 -11: 950 A -0.150923 0.108343 8.828105 -11: 951 C 0.544954 0.155957 8.631912 -11: 952 A -1.011888 0.147396 6.354394 -11: 953 T 0.278774 0.128079 6.910552 -11: 954 T 0.085044 0.090066 6.676260 -11: 955 T 0.477759 0.084808 10.698875 -11: 956 T 0.712612 0.134527 6.732134 -11: 957 G -0.893493 0.157883 8.310082 -11: 958 G -1.736484 0.183551 8.384995 -11: 959 T 1.374018 0.198607 7.557854 -11: 960 C 0.384994 0.125086 7.562732 -11: 961 A -0.809379 0.118107 7.985712 -11: 962 G -0.567025 0.130280 9.312629 -11: 963 C 1.031547 0.133259 10.060877 -11: 964 C 0.178953 0.136052 10.487834 -11: 965 A -0.699117 0.177444 14.229403 -11: 966 T 1.496983 0.337204 14.005887 -11: 967 C 0.134729 0.513955 15.303130 -11: #three -11: pos base current sd dwell -11: 0 A -0.311295 0.287155 1.060577 -11: 1 A -0.327334 0.232119 2.359596 -11: 2 C 0.603081 0.167501 4.553012 -11: 3 T 1.068943 0.205845 7.595290 -11: 4 A -0.793031 0.164284 5.658216 -11: 5 T 0.433380 0.137665 6.946334 -11: 6 T 0.436306 0.088829 6.877754 -11: 7 T 0.693068 0.143372 8.926639 -11: 8 G -0.492321 0.133119 8.557684 -11: 9 T 0.717162 0.193908 7.400294 -11: 10 A -0.617759 0.132158 7.201999 -11: 11 G -0.878187 0.124711 9.196579 -11: 12 T 0.947013 0.203710 9.156119 -11: 13 A -0.494671 0.119469 9.243031 -11: 14 A -0.288858 0.091152 9.829244 -11: 15 C 0.680011 0.103200 9.070368 -11: 16 T 1.186782 0.161338 10.167329 -11: 17 A -0.229526 0.150680 8.783631 -11: 18 G -1.543017 0.128617 8.864950 -11: 19 A -0.669718 0.137331 6.963716 -11: 20 C 1.077298 0.118840 8.659659 -11: 21 C 0.716389 0.104120 7.157910 -11: 22 A -0.281692 0.126018 7.745483 -11: 23 G -0.995533 0.116596 7.121201 -11: 24 A -0.793298 0.090393 9.616691 -11: 25 G -0.853261 0.108390 8.010864 -11: 26 A -0.950247 0.112232 7.616065 -11: 27 G -1.594940 0.127209 8.201823 -11: 28 A -0.352522 0.133524 6.977513 -11: 29 C 0.998388 0.153742 8.300368 -11: 30 A -0.489483 0.116936 8.998850 -11: 31 A -0.342366 0.105625 6.557430 -11: 32 C 0.639107 0.099587 9.183333 -11: 33 T 0.840784 0.181029 6.268268 -11: 34 G -0.987463 0.162989 7.309312 -11: 35 A -0.797785 0.119460 8.223274 -11: 36 C -0.203289 0.124986 6.670275 -11: 37 T 0.842711 0.109019 7.920112 -11: 38 T 0.860292 0.154840 5.673094 -11: 39 A -0.474664 0.111263 7.048129 -11: 40 A -0.441547 0.140034 5.195979 -11: 41 T 1.299606 0.300615 6.987378 -11: 42 A -0.776949 0.154347 6.423832 -11: 43 T 0.457373 0.123936 8.523569 -11: 44 T 0.128682 0.089760 8.039407 -11: 45 T -0.013175 0.092535 7.872333 -11: 46 T -0.122870 0.090170 8.940784 -11: 47 T 0.212840 0.096390 7.659600 -11: 48 T 1.058062 0.139666 8.839641 -11: 49 C -0.087328 0.127199 7.402436 -11: 50 T 1.432613 0.175712 6.858563 -11: 51 C 0.453460 0.110582 7.645921 -11: 52 T 1.289622 0.159644 8.076051 -11: 53 A -0.086664 0.137443 6.426461 -11: 54 A -0.694792 0.100774 7.527868 -11: 55 G -0.628657 0.110919 6.207596 -11: 56 C 0.191094 0.116478 7.916062 -11: 57 T 0.950039 0.150436 9.387542 -11: 58 G -0.243735 0.099546 6.341496 -11: 59 C 0.564169 0.102857 7.769516 -11: 60 T 0.993951 0.181703 6.818446 -11: 61 A -0.567735 0.123331 7.917033 -11: 62 A -0.238808 0.109318 7.887733 -11: 63 C 0.800703 0.109093 6.718105 -11: 64 C 0.516168 0.114472 7.309620 -11: 65 T 1.326329 0.194370 8.059374 -11: 66 A -0.538099 0.116265 8.736328 -11: 67 A -0.751151 0.115656 10.284049 -11: 68 T 1.277648 0.245332 10.568602 -11: 69 G -0.577284 0.149425 8.892444 -11: 70 T 0.714135 0.196311 8.559086 -11: 71 A -0.192810 0.083880 8.774265 -11: 72 C 0.138676 0.101537 6.545554 -11: 73 T 0.811800 0.137296 8.140513 -11: 74 G 0.031256 0.094394 7.527188 -11: 75 C 0.683478 0.136764 6.762471 -11: 76 A -0.352385 0.137659 7.671053 -11: 77 G -1.017901 0.120881 6.958473 -11: 78 A -0.777106 0.087390 7.779403 -11: 79 G -1.131899 0.118075 6.196393 -11: 80 G -2.042570 0.129558 8.701298 -11: 81 A -1.472161 0.189288 6.884301 -11: 82 T 1.796727 0.240129 10.444687 -11: 83 C -0.239306 0.149709 6.722317 -11: 84 T 0.499985 0.104497 9.804369 -11: 85 T 0.578016 0.116127 6.285883 -11: 86 G -0.106692 0.085170 8.264076 -11: 87 C 0.298300 0.114580 6.364541 -11: 88 A 0.101089 0.097941 6.576874 -11: 89 C 0.460653 0.126640 7.942255 -11: 90 A -0.289885 0.126268 7.702404 -11: 91 T 1.043450 0.210441 10.152841 -11: 92 A -0.308771 0.131024 10.039814 -11: 93 T 1.302650 0.227240 8.882949 -11: 94 G -0.487459 0.160952 8.942453 -11: 95 T 0.789376 0.229197 9.613733 -11: 96 A -1.168307 0.143036 8.135337 -11: 97 T 0.661117 0.123481 8.449583 -11: 98 T 1.155030 0.145458 6.392059 -11: 99 C 0.092390 0.106948 9.148997 -11: 100 T 0.985125 0.153691 9.044989 -11: 101 G -0.247703 0.154500 8.848049 -11: 102 G -1.014492 0.106061 8.258709 -11: 103 G -1.184761 0.103394 8.056440 -11: 104 G -1.319439 0.107505 7.331498 -11: 105 A -1.036467 0.110077 5.784654 -11: 106 A -1.056986 0.095197 8.206622 -11: 107 A -0.565708 0.124007 5.991297 -11: 108 T 1.484228 0.215328 8.345864 -11: 109 A 0.150776 0.160757 7.723990 -11: 110 A -0.816787 0.103474 7.844548 -11: 111 A -0.906660 0.111718 7.720866 -11: 112 T 1.286759 0.222001 7.826367 -11: 113 G -0.122856 0.105182 7.148987 -11: 114 C 0.420061 0.111284 6.892807 -11: 115 T 0.879590 0.175035 7.003581 -11: 116 A -0.216872 0.124569 7.107498 -11: 117 T 1.092199 0.186470 9.339549 -11: 118 A 0.248259 0.099826 7.283923 -11: 119 C 0.945592 0.130304 8.494405 -11: 120 A -0.334757 0.158163 9.209718 -11: 121 G -1.521101 0.124264 9.940014 -11: 122 A -1.659791 0.181810 7.611416 -11: 123 T 0.412108 0.133158 11.167106 -11: 124 T 0.117274 0.089290 8.302005 -11: 125 T 0.481561 0.084759 8.384224 -11: 126 T 0.720801 0.151719 8.110123 -11: 127 A -0.886626 0.138840 7.331769 -11: 128 T 1.048694 0.109658 10.414005 -11: 129 T 0.845680 0.148504 6.254208 -11: 130 A -0.647117 0.125252 8.908639 -11: 131 G -1.353991 0.138216 8.602939 -11: 132 T 1.038900 0.249510 8.094348 -11: 133 G -1.263809 0.174045 8.545636 -11: 134 T 0.030450 0.125102 5.778433 -11: 135 T -0.100032 0.086408 7.850801 -11: 136 T 0.324083 0.092247 6.662323 -11: 137 T 0.564916 0.136467 8.120327 -11: 138 A -0.446828 0.110714 10.778038 -11: 139 T 1.111091 0.227917 6.618768 -11: 140 G -0.537827 0.135262 9.770913 -11: 141 T 0.694610 0.210688 6.574341 -11: 142 G -1.332698 0.146792 10.146614 -11: 143 A -1.538443 0.163598 8.083941 -11: 144 T 1.710958 0.210538 9.456977 -11: 145 C 0.456692 0.116346 7.557413 -11: 146 T 1.134288 0.168048 6.976093 -11: 147 A -0.511455 0.121512 7.294465 -11: 148 A -0.729430 0.128438 6.454041 -11: 149 T 1.264288 0.229893 9.432551 -11: 150 G -0.473823 0.161560 6.656142 -11: 151 T 0.583394 0.195093 7.600844 -11: 152 A -0.611254 0.124859 6.719954 -11: 153 T 1.148486 0.185929 9.003714 -11: 154 G -0.193439 0.117145 5.889462 -11: 155 C 0.036527 0.102901 7.213407 -11: 156 T 0.748251 0.145166 5.847999 -11: 157 G -0.036038 0.099870 6.386052 -11: 158 C 0.253125 0.141886 6.248057 -11: 159 A -1.141424 0.163287 6.055283 -11: 160 T 0.278880 0.137413 7.255005 -11: 161 T 0.591926 0.095045 6.952678 -11: 162 T 0.664668 0.145343 7.445435 -11: 163 A -0.416391 0.125078 7.342492 -11: 164 T 0.969433 0.196094 5.849360 -11: 165 G -0.103131 0.095824 7.530622 -11: 166 C 0.761397 0.109852 6.031393 -11: 167 C 0.202864 0.090786 8.034180 -11: 168 A 0.004641 0.089147 9.880465 -11: 169 C 0.938039 0.088736 8.693518 -11: 170 C 0.912710 0.086416 6.800870 -11: 171 C 0.680126 0.097869 9.524375 -11: 172 A -0.417965 0.113165 8.802306 -11: 173 G -0.267304 0.109043 9.685000 -11: 174 C 0.259698 0.143487 7.461463 -11: 175 A -0.755306 0.147237 9.173913 -11: 176 T 1.857432 0.189704 6.901959 -11: 177 C 0.659392 0.144834 7.789598 -11: 178 A -0.738688 0.148011 6.403229 -11: 179 G -1.313827 0.141884 8.549382 -11: 180 T 0.935490 0.209774 7.978489 -11: 181 G -0.576168 0.161269 7.994326 -11: 182 A -1.237598 0.114939 8.523390 -11: 183 G -1.263691 0.154569 6.830394 -11: 184 T 0.702892 0.233990 6.057552 -11: 185 A -0.384592 0.119035 7.188887 -11: 186 T 1.111965 0.186721 9.196483 -11: 187 A 0.227775 0.101191 8.265373 -11: 188 C 0.465370 0.115501 9.988955 -11: 189 A -0.195177 0.114816 7.874096 -11: 190 T 1.130024 0.204475 9.492587 -11: 191 A -0.410659 0.169657 8.666698 -11: 192 G -1.987043 0.207328 6.234952 -11: 193 T 0.405835 0.132059 8.736195 -11: 194 T 1.242721 0.121623 6.067265 -11: 195 C 0.711888 0.109499 8.176789 -11: 196 A -0.152533 0.159666 6.956529 -11: 197 A -0.931378 0.098005 9.730256 -11: 198 G -0.990245 0.119781 8.421977 -11: 199 T 1.053668 0.238102 7.482586 -11: 200 A -0.702159 0.156090 7.523637 -11: 201 G -1.512978 0.166625 7.792603 -11: 202 T 1.545065 0.216306 7.961432 -11: 203 C 0.243149 0.118569 5.624920 -11: 204 T 0.940277 0.180377 6.095434 -11: 205 A -0.053656 0.126529 5.544594 -11: 206 T 1.371459 0.194257 7.800436 -11: 207 A 0.020393 0.162253 7.238246 -11: 208 A -0.784641 0.105770 9.470555 -11: 209 G -1.929799 0.161793 7.932556 -11: 210 T 0.196261 0.127528 8.982373 -11: 211 T -0.072043 0.086394 8.435682 -11: 212 T 0.147994 0.091987 10.779382 -11: 213 T 1.064395 0.123769 9.160484 -11: 214 C 0.402881 0.086430 10.921864 -11: 215 C 0.421535 0.078287 8.601614 -11: 216 C 0.478501 0.099957 7.653180 -11: 217 T 1.350108 0.162748 8.188297 -11: 218 A 0.173342 0.113915 7.842484 -11: 219 A -0.161554 0.095254 9.150524 -11: 220 G -0.867949 0.119783 7.874591 -11: 221 A 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-0.794094 0.175032 8.363600 -11: 921 G -1.737758 0.182864 8.889228 -11: 922 T 1.303459 0.204419 8.064414 -11: 923 C 0.111110 0.113156 7.629996 -11: 924 T 0.903305 0.167904 6.787367 -11: 925 A -0.018874 0.089922 6.853965 -11: 926 C 0.314718 0.107410 7.636100 -11: 927 T 0.989648 0.215371 8.224966 - 7/19 Test #12: test_squiggle_r10 ................ Passed 0.22 sec -test 13 - Start 13: test_licence - -13: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "license" -13: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 -13: Test timeout computed to be: 10000000 -11: 928 G -0.823620 0.182883 9.532692 -11: 929 T 1.573712 0.225036 8.878210 -11: 930 C -0.339261 0.145216 8.672426 -11: 931 T 0.742400 0.112312 8.461155 -11: 932 T 0.499959 0.134619 8.199708 -11: 933 G -0.954647 0.154408 5.004352 -11: 934 A -0.504929 0.132210 5.827426 -11: 935 C 0.522766 0.144336 6.196374 -11: 936 A 0.226727 0.097523 7.341734 -11: 937 C 0.829222 0.140563 8.349807 -11: 938 A -0.832653 0.148421 7.680011 -11: 939 G -1.896683 0.192063 8.029772 -11: 940 T 0.634314 0.138839 8.218629 -11: 941 T 0.706732 0.165989 7.705069 -11: 942 G -0.961286 0.176441 7.730278 -11: 943 T 1.393308 0.168159 7.002189 -11: 944 C 0.712281 0.100139 7.196340 -11: 945 C 0.761515 0.096349 8.012708 -11: 946 A -0.174630 0.134926 7.063244 -11: 947 A -0.889210 0.111553 8.122797 -11: 948 A -0.496646 0.110212 6.355326 -11: 949 C -0.030902 0.123254 6.284311 -11: 950 T 0.539514 0.109747 6.310049 -11: 951 T 0.603339 0.128781 6.031544 -11: 952 G -0.055366 0.097091 8.642225 -11: 953 C 0.279945 0.120169 6.544121 -11: 954 A -0.177389 0.102696 6.843099 -11: 955 C -0.314765 0.107636 5.294432 -11: 956 T 0.151626 0.108177 7.202971 -11: 957 T 0.361221 0.098759 6.666613 -11: 958 T 1.253257 0.160001 6.681376 -11: 959 C -0.246583 0.134269 6.361576 -11: 960 T 0.871896 0.128797 6.511108 -11: 961 T 0.750817 0.130445 6.645499 -11: 962 A -0.453094 0.119930 5.789803 -11: 963 A -0.390890 0.099112 6.467691 -11: 964 C 0.184733 0.126474 7.449684 -11: 965 T 1.517728 0.210021 5.162717 -11: 966 C -0.249776 0.121012 7.457033 -11: 967 T 0.135949 0.113933 7.230278 -11: 968 T 0.183208 0.096984 8.195432 -11: 969 T 1.168229 0.125161 8.325791 -11: 970 C 0.251919 0.094041 8.760427 -11: 971 C -0.081579 0.115393 8.199389 -11: 972 T 1.658619 0.165692 8.877240 -11: 973 C 0.251796 0.134485 10.819922 -11: 974 A -0.622067 0.161636 12.727167 -11: 975 T 1.586564 0.282641 13.846351 -11: 976 C 0.224918 0.319810 17.568277 -11: 977 T -0.103125 0.511802 13.342871 -11: #four -11: pos base current sd dwell -11: 0 T 0.166835 0.436895 0.765032 -11: 1 C -0.117098 0.282138 1.513293 -11: 2 T 0.618338 0.169050 3.018989 -11: 3 T 0.723374 0.141094 5.514826 -11: 4 G -0.217006 0.112490 5.595528 -11: 5 C 0.138339 0.112377 7.495106 -11: 6 T 0.740771 0.144511 10.189116 -11: 7 G -0.143514 0.112372 7.201092 -11: 8 C 0.504390 0.100889 9.286238 -11: 9 C -0.043960 0.123593 9.189075 -11: 10 T 1.519888 0.185229 8.165014 -11: 11 C 0.112155 0.138962 8.729239 -11: 12 T 1.583414 0.188546 9.017800 -11: 13 C 0.110830 0.132357 9.827449 -11: 14 T 1.634218 0.153956 9.398744 -11: 15 C 0.275699 0.118399 8.698074 -11: 16 A -0.344538 0.120230 7.774749 -11: 17 T 0.889875 0.202514 8.485724 -11: 18 G -1.022511 0.163862 8.888418 -11: 19 A -1.195305 0.143856 8.373373 -11: 20 T 1.094474 0.208156 8.936539 -11: 21 G -0.380128 0.157443 5.944422 -11: 22 A -0.870078 0.099052 7.552443 -11: 23 A -0.637778 0.107066 7.070957 -11: 24 A -0.897810 0.094884 8.642602 -11: 25 G -1.048457 0.119129 8.362503 -11: 26 T 1.053503 0.210402 8.684450 -11: 27 A -0.123801 0.127091 9.873129 -11: 28 G -0.866720 0.111136 10.818135 -11: 29 A -1.191061 0.101278 11.534080 -11: 30 G -1.288471 0.129715 10.238953 -11: 31 T 0.746250 0.198959 9.635349 -11: 32 A 0.126888 0.084888 10.520163 -11: 33 C 1.038079 0.122269 8.008954 -11: 34 A -0.058597 0.114872 9.918142 -11: 35 A -0.428188 0.088465 10.174927 -11: 36 G -0.865035 0.110992 11.576161 -11: 37 A -0.739314 0.091850 11.251355 -11: 38 G -0.991197 0.102639 11.882182 -11: 39 A -0.708373 0.091926 8.314397 -11: 40 G -1.129652 0.109850 8.717175 -11: 41 G -1.938506 0.133996 7.478474 -11: 42 A -1.157363 0.144873 8.132708 -11: 43 T 1.131321 0.211295 7.760635 -11: 44 G -0.345413 0.158452 7.576816 -11: 45 A -0.734833 0.100007 11.897801 -11: 46 G -1.044753 0.120617 11.425037 -11: 47 A -1.195220 0.097022 10.945896 -11: 48 G -1.365318 0.130948 11.061652 -11: 49 T 1.055422 0.186429 12.094939 -11: 50 G -0.348849 0.142358 8.902178 -11: 51 A -0.900087 0.112144 10.507211 -11: 52 A -1.015805 0.119588 8.920523 -11: 53 A -0.076585 0.127703 7.996811 -11: 54 C 1.192647 0.135379 10.008601 -11: 55 A 0.019539 0.130294 8.721436 -11: 56 A -0.430799 0.097420 7.983379 -11: 57 G -0.916118 0.120056 7.524692 -11: 58 G -1.527811 0.106781 8.251543 -11: 59 G -1.467464 0.127683 7.013452 -11: 60 T 0.752757 0.183303 7.398427 -11: 61 G -0.571354 0.141839 8.034221 -11: 62 G -0.496422 0.116635 7.187658 -11: 63 C 0.612142 0.136605 7.175906 -11: 64 A -0.303374 0.138559 7.194109 -11: 65 G -0.823003 0.113335 6.662519 -11: 66 A -0.826391 0.108935 9.456810 -11: 67 G -1.589589 0.135477 7.677537 -11: 68 A -1.323109 0.204185 7.738699 -11: 69 T 1.854898 0.219015 8.034103 -11: 70 C 0.428521 0.113334 6.246879 -11: 71 C -0.429442 0.117889 7.642052 -11: 72 T 0.417622 0.136129 8.954143 -11: 73 T 0.165683 0.100389 8.564588 -11: 74 T 0.551375 0.088001 7.712838 -11: 75 T 0.670483 0.141851 6.412216 -11: 76 A -0.147543 0.106927 7.417604 -11: 77 T 1.319104 0.212658 8.756752 -11: 78 A -0.376166 0.137096 7.251154 -11: 79 A -0.461441 0.124604 6.081004 -11: 80 T 1.346928 0.225280 7.280936 -11: 81 A 0.229074 0.150709 5.857566 -11: 82 A -0.297681 0.102579 7.354868 -11: 83 A -0.852020 0.093358 8.272622 -11: 84 G -0.492752 0.119098 8.255494 -11: 85 C 1.022682 0.138752 6.825912 -11: 86 C 0.220250 0.128409 7.617369 -11: 87 A -1.172719 0.149533 7.005167 -11: 88 T 0.540948 0.137282 6.256406 -11: 89 T 1.224664 0.149053 5.347936 -11: 90 C 0.024768 0.124024 7.086915 -11: 91 T 1.660969 0.146352 7.115716 -11: 92 C 0.807059 0.120398 6.888180 -11: 93 A -0.664001 0.114394 6.377109 -11: 94 A -0.456367 0.116754 6.777672 -11: 95 T 1.236703 0.234269 7.939996 -11: 96 A -0.385314 0.138166 7.161553 -11: 97 A -0.253569 0.112863 8.171007 -11: 98 C 0.908670 0.112440 8.557295 -11: 99 C 0.697814 0.098866 8.069679 -11: 100 C 0.448440 0.103245 5.894133 -11: 101 A -0.130425 0.091700 8.810245 -11: 102 C 0.059492 0.121530 6.920706 -11: 103 T 1.587609 0.158599 8.138809 -11: 104 C 0.431064 0.105986 8.860386 -11: 105 C -0.359881 0.112539 7.441294 -11: 106 T 0.811309 0.127396 7.656103 -11: 107 T 0.752609 0.122765 9.330440 -11: 108 G -0.581963 0.165209 7.631375 -11: 109 G -1.077140 0.134705 9.325708 -11: 110 T 0.647240 0.206965 8.184109 -11: 111 A -0.687461 0.125724 7.345119 -11: 112 A -0.080204 0.096281 8.723757 -11: 113 C 0.799664 0.143855 7.930914 -11: 114 A -0.536515 0.122096 8.979161 -11: 115 G -0.308127 0.113288 7.453098 -11: 116 C 0.401629 0.145152 7.186212 -11: 117 A -0.314493 0.124177 8.514683 -11: 118 T 1.127373 0.261221 6.831612 -11: 119 A -0.905198 0.162695 6.383660 -11: 120 T 1.016221 0.127341 8.171490 -11: 121 T 0.880442 0.131285 7.536387 -11: 122 G -0.503287 0.183673 6.286657 -11: 123 A -1.599963 0.131488 6.529171 -11: 124 A -1.395266 0.172672 6.594497 -11: 125 T 1.035790 0.139626 10.060863 -11: 126 T 0.842522 0.182087 6.585770 -11: 127 A -1.022094 0.140073 11.167691 -11: 128 T 0.697248 0.123986 10.039232 -11: 129 T 1.302531 0.117595 10.658107 -11: 130 C 0.173581 0.123875 10.253253 -11: 131 A -1.303811 0.157180 9.798209 -11: 132 T 0.522390 0.130003 11.399858 -11: 133 T 1.316289 0.125384 8.196713 -11: 134 C 0.180079 0.109264 11.281496 -11: 135 A -0.410387 0.112758 10.859014 -11: 136 T 0.858127 0.170254 8.870661 -11: 137 G -0.566360 0.139626 7.768338 -11: 138 A -0.893341 0.098879 6.812430 -11: 139 G -0.912914 0.099336 7.208140 -11: 140 G -1.326535 0.121435 7.029278 -11: 141 G -2.056896 0.123395 7.260550 -11: 142 A -1.264090 0.147755 6.209209 -11: 143 T 1.113537 0.210007 8.750245 -11: 144 G -0.280447 0.170611 6.635219 -11: 145 A -0.922847 0.096811 10.626465 -11: 146 G -1.348619 0.116412 7.207206 -11: 147 G -0.791396 0.136649 8.199749 -11: 148 C 0.625426 0.112992 7.399143 -11: 149 C 0.323009 0.091591 7.535717 -11: 150 C -0.301642 0.133463 7.573085 -11: 151 T 0.929437 0.127533 7.924469 -11: 152 T 0.743291 0.146729 5.922793 -11: 153 A -0.211867 0.116040 6.561136 -11: 154 T 1.181705 0.229267 8.107802 -11: 155 A -0.089961 0.128930 5.973789 -11: 156 T 0.913355 0.196252 8.012566 -11: 157 G -0.944310 0.174076 7.800128 -11: 158 A -0.440579 0.143728 7.821120 -11: 159 C 1.002841 0.183402 8.218750 -11: 160 A -0.693786 0.131390 7.742005 -11: 161 A -0.960819 0.141130 8.263263 -11: 162 T 1.936120 0.237299 8.063910 -11: 163 C 0.272009 0.157212 6.320297 -11: 164 A -0.702947 0.155308 8.633670 -11: 165 T 1.808992 0.217829 8.483496 -11: 166 C -0.273344 0.127890 7.161556 -11: 167 T 0.205166 0.114473 7.018878 -11: 168 T 0.021006 0.095231 6.799056 -11: 169 T 0.623558 0.094006 5.835626 -11: 170 T 0.815930 0.130335 6.801915 -11: 171 A -0.517771 0.143544 5.768711 -11: 172 G -0.918365 0.137028 7.363832 -11: 173 T 1.037039 0.211406 6.873050 -11: 174 A -0.136315 0.150142 5.320717 -11: 175 A -0.758854 0.112765 6.330305 -11: 176 A -0.547228 0.104969 6.322348 -11: 177 C -0.252346 0.114483 6.362328 -11: 178 T 0.516618 0.116518 7.156847 -11: 179 T 1.098990 0.142846 5.729582 -11: 180 C -0.001125 0.124070 7.177573 -11: 181 T 1.534220 0.191147 8.488256 -11: 182 C -0.437356 0.145801 6.181550 -11: 183 T 0.437636 0.128294 7.951239 -11: 184 T 1.129271 0.130156 5.890073 -11: 185 C 0.797761 0.086376 6.982273 -11: 186 C 0.724545 0.097094 6.915535 -11: 187 A -0.494589 0.133142 7.169059 -11: 188 A -0.677749 0.123588 7.654995 -11: 189 T 1.095374 0.228376 6.677983 -11: 190 A -0.011849 0.099278 5.956757 -11: 191 C 0.264144 0.106274 7.425848 -11: 192 T 0.831715 0.164599 7.686725 -11: 193 G -0.154318 0.103626 9.261940 -11: 194 C 0.835547 0.099445 8.511744 -11: 195 C 0.343382 0.089206 8.779939 -11: 196 A 0.110858 0.084800 9.939800 -11: 197 C 0.482831 0.107758 7.339164 -11: 198 A -0.027170 0.095488 6.765213 -11: 199 C 0.473162 0.093670 10.373390 -11: 200 T 1.021817 0.158811 8.442555 -11: 201 A 0.273382 0.091494 9.473405 -11: 202 C 0.843193 0.132983 7.456450 -11: 203 A -0.233801 0.138651 5.879046 -11: 204 G -1.072482 0.118272 5.847452 -11: 205 G -2.050398 0.154491 4.704938 -11: 206 A -1.845458 0.204175 5.883526 -11: 207 T 1.036277 0.145953 8.224422 -11: 208 T 0.989608 0.123806 6.958117 -11: 209 A -0.069599 0.139484 7.203624 -11: 210 A -0.848245 0.106619 7.950566 -11: 211 G -1.982166 0.173114 7.365967 -11: 212 T 0.413798 0.142133 9.027237 -11: 213 T 1.109784 0.131390 6.537129 -11: 214 C 0.451447 0.088992 7.747710 -11: 215 C 0.750586 0.082258 8.364842 -11: 216 C 0.809612 0.101919 7.746975 -11: 217 A -0.446966 0.122098 8.608220 -11: 218 A -0.092286 0.105011 8.260621 -11: 219 C 0.658260 0.125361 8.338155 -11: 220 A 0.260323 0.093410 8.253176 -11: 221 C 0.516868 0.125958 9.584138 -11: 222 A -0.248095 0.118753 9.708548 -11: 223 T 1.040953 0.183696 10.209812 -11: 224 G -0.567262 0.167413 8.530831 -11: 225 A -1.483701 0.137056 8.911543 -11: 226 A -0.520271 0.116091 6.823612 -11: 227 C -0.262019 0.105669 8.517806 -11: 228 T 0.208641 0.114467 8.677258 -11: 229 T 0.438474 0.091496 8.925888 -11: 230 T 0.783639 0.114768 8.415961 -11: 231 G -0.287548 0.149722 6.610557 -11: 232 G -0.949887 0.106822 8.686745 -11: 233 G -1.446230 0.109408 8.651088 -11: 234 G -2.063710 0.145687 7.738941 -11: 235 A -0.684726 0.145294 7.550519 -11: 236 C 0.398697 0.147878 5.661644 -11: 237 A -0.186685 0.114231 6.854346 -11: 238 T 1.246369 0.239605 8.848093 -11: 239 A -0.450193 0.193158 5.777120 -11: 240 G -1.478229 0.171162 9.038843 -11: 241 T 1.705322 0.209601 6.966751 -11: 242 C 0.791805 0.131245 7.890794 -11: 243 A -0.061705 0.138740 9.803794 -11: 244 A -1.028569 0.114108 7.693987 -11: 245 A -1.022370 0.159663 8.724868 -11: 246 T 2.052416 0.259551 6.991632 -11: 247 C 0.405544 0.145831 8.609998 -11: 248 A -0.448515 0.145852 6.564554 -11: 249 T 1.019982 0.227294 8.855143 -11: 250 G -0.717027 0.159934 9.416330 -11: 251 T 1.576982 0.165529 10.241499 -11: 252 C 0.152739 0.132975 8.988431 -11: 253 A -1.216352 0.149448 8.063580 -11: 254 T 0.204761 0.130574 8.308444 -11: 255 T 0.467147 0.084033 6.884979 -11: 256 T 0.746033 0.136621 8.132746 -11: 257 G -0.478082 0.135282 7.174057 -11: 258 T 0.854248 0.164191 8.299076 -11: 259 A -0.072947 0.124639 6.314885 -11: 260 A -0.373278 0.090115 8.518128 -11: 261 A -0.675141 0.094504 7.484517 -11: 262 G -1.180970 0.111687 8.765956 -11: 263 G -0.854489 0.126711 6.463075 -11: 264 C -0.444880 0.104257 7.421474 -11: 265 T 0.166920 0.107091 7.247210 -11: 266 T 0.398543 0.085593 8.790505 -11: 267 T 0.649354 0.138632 6.011219 -11: 268 A -0.185889 0.104375 7.226486 -11: 269 T 1.338790 0.197957 5.798404 -11: 270 A 0.045776 0.147340 7.763676 -11: 271 A -0.790200 0.109506 6.410412 -11: 272 A -0.951173 0.117209 7.472205 -11: 273 T 1.205887 0.207651 7.445291 -11: 274 G 0.101866 0.113529 7.542528 -11: 275 C 0.322473 0.153397 7.128542 -11: 276 A -1.131690 0.145284 9.245490 -11: 277 T 0.166097 0.131282 6.854979 -11: 278 T 0.386735 0.088471 8.455197 -11: 279 T 1.194282 0.140783 7.278749 -11: 280 C -0.385232 0.113511 9.027004 -11: 281 T 0.211539 0.121870 6.333757 -11: 282 T -0.046429 0.084057 8.121961 -11: 283 T 0.013642 0.085891 7.220057 -11: 284 T 0.326385 0.083401 9.173930 -11: 285 T 0.697881 0.170418 7.251585 -11: 286 G -1.357710 0.169700 10.517923 -11: 287 T -0.029332 0.128276 6.859797 -11: 288 T 0.228093 0.080978 7.518355 -11: 289 T 0.616442 0.165402 7.000888 -11: 290 G -1.339002 0.175292 7.617629 -11: 291 T -0.006158 0.121840 6.415618 -11: 292 T -0.111619 0.080472 8.359306 -11: 293 T -0.105666 0.087619 8.129051 -11: 294 T 0.255019 0.077225 9.788573 -11: 295 T 0.661129 0.151133 9.392632 -11: 296 G -1.407347 0.164897 8.856139 -11: 297 T -0.009757 0.117552 7.522593 -11: 298 T -0.168662 0.083091 6.485792 -11: 299 T -0.134586 0.083945 8.775753 -11: 300 T 0.487410 0.091558 8.013026 -11: 301 T 0.864189 0.115467 9.186227 -11: 302 A 0.044776 0.118407 7.734317 -11: 303 A -0.349433 0.095776 7.656123 -11: 304 A -0.588546 0.099480 6.750293 -11: 305 G -1.336190 0.116180 7.997303 -11: 306 G -2.224212 0.185035 7.810821 -11: 307 T 0.299250 0.130478 7.754380 -11: 308 T 1.000183 0.115315 7.446825 -11: 309 C 0.204181 0.105274 7.080560 -11: 310 T 1.061688 0.148144 8.192425 -11: 311 A -0.115849 0.143539 8.710443 -11: 312 G -1.494316 0.123450 8.373253 -11: 313 A -0.876395 0.129382 9.916263 -11: 314 T 1.391720 0.236256 7.426105 -11: 315 A 0.084628 0.120221 9.703373 -11: 316 A -0.407155 0.106423 6.201221 -11: 317 A -0.877223 0.090771 7.705505 -11: 318 G -0.308174 0.113920 5.924160 -11: 319 C 0.899048 0.148102 8.577447 -11: 320 A -0.224747 0.141382 9.281273 -11: 321 G -1.002770 0.128991 9.424140 -11: 322 A -1.201687 0.103671 11.047409 -11: 323 G -1.176087 0.144536 7.732702 -11: 324 T 0.892482 0.236107 10.087751 -11: 325 A -0.568200 0.145592 7.765299 -11: 326 T 1.941297 0.177480 11.270680 -11: 327 C 0.494201 0.113580 7.944658 -11: 328 T 1.158481 0.153055 9.844819 -11: 329 A 0.142198 0.129764 8.965101 -11: 330 A -0.274157 0.097952 9.819465 -11: 331 G -0.829971 0.102566 9.640429 -11: 332 A -0.905149 0.107331 9.520463 -11: 333 G -1.543413 0.128998 8.394149 -11: 334 A -0.915448 0.167366 7.864495 -11: 335 T 1.125907 0.233854 10.280823 -11: 336 A -0.282905 0.118917 8.064471 -11: 337 T 1.222010 0.173652 7.801257 -11: 338 G -0.080853 0.164403 5.971410 -11: 339 G -0.946258 0.110921 8.994237 -11: 340 G -1.393816 0.112496 9.123342 -11: 341 A -1.184073 0.106661 7.361342 -11: 342 A -0.867829 0.096627 8.298866 -11: 343 G -0.254877 0.121074 6.325575 -11: 344 C 1.129189 0.139946 8.242011 -11: 345 A -0.013324 0.145980 6.819026 -11: 346 A -1.022088 0.099502 8.270084 -11: 347 A -1.022621 0.150643 8.370169 -11: 348 T 2.021974 0.253009 9.394669 -11: 349 C -0.173579 0.139937 7.809258 -11: 350 T 0.261508 0.112937 9.324517 -11: 351 T 0.082177 0.091560 6.986620 -11: 352 T 0.331473 0.092352 8.672555 -11: 353 T 0.593769 0.133953 6.853872 -11: 354 G -0.252961 0.107482 8.047237 -11: 355 C 0.505702 0.103810 7.485252 -11: 356 C 0.123729 0.101823 8.126772 -11: 357 T 1.113353 0.157492 9.714616 -11: 358 G -0.360421 0.183887 7.736997 -11: 359 G -1.920535 0.151757 7.395856 -11: 360 A -1.850211 0.185490 6.532670 -11: 361 T 0.159841 0.138620 6.364802 -11: 362 T 0.277570 0.088207 6.731048 -11: 363 T 1.069035 0.151136 6.477030 -11: 364 C -0.459415 0.125542 7.934018 -11: 365 T 0.782102 0.112738 8.329649 -11: 366 T 0.793189 0.119722 7.461045 -11: 367 A -0.243132 0.140327 6.780031 -11: 368 G -1.525215 0.130715 6.989549 -11: 369 A -1.573822 0.175332 8.977125 -11: 370 T 0.866131 0.148592 9.536270 -11: 371 T 0.739973 0.113773 9.636393 -11: 372 A 0.221723 0.083500 8.189714 -11: 373 C 1.057262 0.117500 8.501005 -11: 374 A 0.035635 0.136553 9.473317 -11: 375 A -0.944103 0.102278 8.159327 -11: 376 A -1.571164 0.139723 8.890088 -11: 377 T 0.838061 0.142223 7.571460 -11: 378 T 1.378180 0.120026 8.844301 -11: 379 C 0.646628 0.129631 9.965104 -11: 380 A -0.813803 0.138234 7.295972 -11: 381 G -1.393555 0.127742 10.920593 -11: 382 T 0.908347 0.196697 7.664443 -11: 383 G -0.384682 0.133769 8.279062 -11: 384 A -0.926327 0.103074 9.606117 -11: 385 A -1.106692 0.094561 8.721931 -11: 386 A -0.500546 0.114439 7.797537 -11: 387 T 1.381684 0.251952 7.437055 -11: 388 A -0.522385 0.124857 8.878531 -11: 389 A -0.797495 0.109914 8.552414 -11: 390 T 1.226195 0.255509 5.892972 -11: 391 G -0.499467 0.141600 7.493773 -11: 392 T 0.828256 0.190281 5.975989 -11: 393 G -0.481957 0.142740 7.319927 -11: 394 A -1.050653 0.121948 5.283445 -11: 395 A -0.951074 0.100667 6.255395 -11: 396 G -1.170249 0.155823 5.515483 -11: 397 T 0.895330 0.241572 5.884778 -11: 398 A -0.063175 0.089841 6.698262 -11: 399 C -0.233996 0.106957 5.441536 -11: 400 T 0.044981 0.109528 7.064809 -11: 401 T 0.295023 0.102381 6.609096 -11: 402 T 1.176783 0.148012 7.203699 -11: 403 C -0.083354 0.117317 7.709378 -11: 404 T 1.447539 0.158214 7.168685 -11: 405 C 0.571553 0.095930 5.246137 -11: 406 C 0.689670 0.082090 6.902057 -11: 407 C 0.420274 0.091375 8.181105 -11: 408 A 0.180592 0.086789 11.305603 -11: 409 C 0.735335 0.104522 9.716483 -11: 410 C -0.300725 0.115382 10.123306 -11: 411 T 1.135368 0.126502 9.258637 -11: 412 T 0.999356 0.140246 9.087624 -11: 413 A -0.653413 0.123734 7.881132 -11: 414 A -0.928897 0.151287 7.834845 -11: 415 T 1.979219 0.207116 10.776080 -11: 416 C 0.835945 0.162020 8.649159 -11: 417 A -0.804320 0.106139 11.771345 -11: 418 A -0.860542 0.106803 11.045352 -11: 419 T 1.271925 0.185566 10.625917 -11: 420 G -0.396637 0.172507 6.898079 -11: 421 G -1.984003 0.137157 9.564488 -11: 422 A -1.879742 0.194265 6.888107 -11: 423 T 0.652221 0.124028 11.130095 -11: 424 T 0.653002 0.134043 9.350691 -11: 425 G -0.833323 0.130598 10.968057 -11: 426 T 0.843222 0.169269 7.807043 -11: 427 G -0.450550 0.159200 7.804190 -11: 428 G -1.509250 0.120436 8.557225 -11: 429 G -1.785363 0.143667 7.605028 -11: 430 T 0.675710 0.208002 6.782837 -11: 431 G -0.552059 0.138927 6.779681 -11: 432 T 0.931761 0.180285 8.665515 -11: 433 A -0.183525 0.149834 7.257071 -11: 434 A -0.832657 0.106018 8.233850 -11: 435 G -1.964710 0.167494 7.957552 -11: 436 T 0.264870 0.133271 7.520540 -11: 437 T 0.055595 0.085766 7.576603 -11: 438 T -0.116709 0.096590 8.371239 -11: 439 T 0.264949 0.099142 7.177552 -11: 440 T 1.203200 0.123617 9.972582 -11: 441 C 0.235834 0.133020 7.048162 -11: 442 A -1.207725 0.149154 9.223414 -11: 443 T 0.262814 0.135070 8.186847 -11: 444 T 0.130231 0.093389 7.957027 -11: 445 T 0.278476 0.093065 7.616873 -11: 446 T 0.659815 0.131556 8.328638 -11: 447 G -0.353356 0.092064 9.533044 -11: 448 C 0.028239 0.102642 7.592375 -11: 449 T 0.758828 0.158570 11.582279 -11: 450 G -0.555998 0.151048 9.048632 -11: 451 T 0.825496 0.216632 9.504213 -11: 452 A -1.088476 0.142516 7.897450 -11: 453 T 0.339665 0.116485 9.377330 -11: 454 T 0.566563 0.086573 7.791203 -11: 455 T 0.583529 0.120570 9.069468 -11: 456 G -1.235564 0.128519 8.653571 -11: 457 A -1.084347 0.121111 8.576181 -11: 458 T 1.028300 0.220900 8.035826 -11: 459 A -0.258586 0.153919 8.368939 -11: 460 G -1.217152 0.113557 8.902595 -11: 461 G -1.561303 0.132049 9.097750 -11: 462 T 0.675088 0.186401 6.645061 -11: 463 G -0.535399 0.124176 9.812523 -11: 464 A -0.747067 0.102718 8.270218 -11: 465 G -1.026650 0.111194 8.149629 -11: 466 A -1.405634 0.120292 7.259391 -11: 467 A -1.355497 0.162130 6.785115 -11: 468 T 1.121210 0.134431 8.414144 -11: 469 T 0.946491 0.147553 7.899261 -11: 470 A -0.502881 0.142477 6.286867 -11: 471 G -1.041340 0.141490 9.761839 -11: 472 T 0.902561 0.276967 6.654922 -11: 473 A -0.991810 0.130890 8.661029 -11: 474 T 0.417144 0.127230 8.347287 -11: 475 T 0.118919 0.096706 6.988873 -11: 476 T 0.652036 0.094616 7.654674 -11: 477 T 0.934818 0.133545 8.058454 -11: 478 A -0.482383 0.117697 8.191341 -11: 479 A -0.557380 0.116113 8.691304 -11: 480 T 1.075499 0.224372 9.363204 -11: 481 A -0.064686 0.120595 7.433255 -11: 482 T 1.353238 0.210452 9.438107 -11: 483 A -0.532753 0.144453 8.599674 -11: 484 A -1.331704 0.137901 6.967939 -11: 485 T 0.373335 0.130398 8.108504 -11: 486 T 0.100229 0.095723 6.637452 -11: 487 T 0.424458 0.077037 9.005941 -11: 488 T 0.680910 0.122533 6.899778 -11: 489 G -0.852024 0.149263 7.601290 -11: 490 G -2.106459 0.177916 6.787720 -11: 491 T -0.107320 0.119613 7.826046 -11: 492 T -0.102725 0.081755 6.262988 -11: 493 T 0.111233 0.086868 6.794209 -11: 494 T 0.498048 0.107846 7.526946 -11: 495 G -0.128082 0.100486 6.251700 -11: 496 C 0.177968 0.128018 7.992279 -11: 497 A -1.169792 0.157908 5.790226 -11: 498 T 0.095688 0.118249 7.598365 -11: 499 T 0.358106 0.092698 7.672088 -11: 500 T 1.171506 0.138726 7.814196 -11: 501 C -0.434877 0.130064 6.288679 -11: 502 T 0.119602 0.114506 8.295955 -11: 503 T 0.004747 0.094808 8.631721 -11: 504 T 0.503103 0.092150 7.077334 -11: 505 T 0.608331 0.150576 7.401151 -11: 506 A -0.628488 0.132339 5.562982 -11: 507 T 1.880826 0.177848 8.315535 -11: 508 C 0.736503 0.144661 7.590368 -11: 509 A -0.723084 0.128247 9.809380 -11: 510 G -0.998953 0.138819 7.439286 -11: 511 T 1.079953 0.190934 9.788911 -11: 512 A -0.117309 0.135498 6.755144 -11: 513 A -0.801498 0.098363 7.718127 -11: 514 A -0.580311 0.094607 6.522369 -11: 515 C 0.213617 0.123385 5.871772 -11: 516 T 1.590365 0.160432 6.054009 -11: 517 C 0.667720 0.136838 6.825070 -11: 518 A -0.759803 0.113962 7.513353 -11: 519 G -1.409339 0.134564 7.226471 -11: 520 T 1.135672 0.250230 8.421185 -11: 521 G -1.251098 0.183697 7.851877 -11: 522 T 0.081226 0.125546 5.941891 -11: 523 T -0.139669 0.077951 7.925524 -11: 524 T -0.183483 0.088485 8.521107 -11: 525 T 0.236994 0.093571 7.806458 -11: 526 T 1.166311 0.117394 8.990285 -11: 527 C 0.164811 0.109496 6.096145 -11: 528 A -0.283740 0.110804 8.936200 -11: 529 T 0.995403 0.216899 8.606839 -11: 530 A -0.357444 0.152656 9.113802 -11: 531 G -0.985002 0.132976 8.848294 -11: 532 T 0.998057 0.188443 9.609728 -11: 533 A 0.043390 0.114293 9.599382 -11: 534 A -0.262908 0.105864 9.611368 -11: 535 A -1.078328 0.107542 7.103237 -11: 536 A -1.002326 0.146454 9.060390 -11: 537 T 2.100509 0.213543 9.607203 -11: 538 C 0.779462 0.159034 8.670572 -11: 539 A -0.883673 0.132590 9.827243 -11: 540 G -1.948459 0.166055 9.243493 -11: 541 T 0.650030 0.124106 10.400126 -11: 542 T 0.773616 0.137514 8.887955 -11: 543 G -0.789395 0.165189 7.607225 -11: 544 G -1.402659 0.135276 8.997213 -11: 545 T 0.628180 0.202448 7.043313 -11: 546 G -1.232877 0.151276 6.556089 -11: 547 A -1.832410 0.164681 8.805199 -11: 548 T 0.353752 0.141230 7.383499 -11: 549 T 0.471988 0.081366 8.421073 -11: 550 T 0.711761 0.141795 6.991326 -11: 551 G -0.680893 0.158907 8.762792 -11: 552 G -1.220049 0.137310 7.634844 -11: 553 T 0.477689 0.193724 6.997320 -11: 554 A -0.513159 0.114963 7.097393 -11: 555 G -0.315544 0.114301 6.381520 -11: 556 C 0.377139 0.168773 5.609684 -11: 557 A -1.103974 0.164467 7.578619 -11: 558 T 0.387657 0.140777 8.477066 -11: 559 T 0.653976 0.093942 7.747312 -11: 560 T 0.721076 0.159104 7.596865 -11: 561 A -1.113541 0.142178 7.064010 -11: 562 T 0.676813 0.123413 8.485888 -11: 563 T 1.213496 0.153176 6.588946 -11: 564 C -0.541277 0.140969 6.613645 -11: 565 T 0.498907 0.136248 8.225046 -11: 566 T 1.260255 0.128926 7.437580 -11: 567 C 0.738710 0.120801 9.717491 -11: 568 A -0.649786 0.137775 7.665903 -11: 569 A -1.333848 0.169713 7.748673 -11: 570 T 0.985873 0.141225 8.079927 -11: 571 T 0.868524 0.167108 7.055111 -11: 572 A -0.868175 0.144113 6.014556 -11: 573 T 0.329468 0.124702 6.933782 -11: 574 T 0.087203 0.098567 5.507680 -11: 575 T 0.524725 0.088491 7.925218 -11: 576 T 0.672756 0.134032 5.567120 -11: 577 A -0.407978 0.109209 8.412396 -11: 578 G -0.695554 0.111097 6.831264 -11: 579 C -0.351350 0.103383 8.282887 -11: 580 T 0.185887 0.106988 6.236856 -11: 581 T -0.015126 0.084618 8.605663 -11: 582 T -0.063504 0.090723 8.561692 -11: 583 T 0.257855 0.087696 9.042688 -11: 584 T 1.018560 0.138924 7.208042 -11: 585 C -0.130892 0.118249 8.633609 -11: 586 T 1.389827 0.199611 7.029544 -11: 587 C 0.066669 0.103619 9.932940 -11: 588 T 0.932390 0.181204 9.180961 -11: 589 G -0.404308 0.140632 8.817426 -11: 590 T 0.949407 0.191946 6.905317 -11: 591 A -0.822034 0.121525 8.392054 -11: 592 A -1.356598 0.134774 7.216632 -11: 593 T 0.687378 0.128863 7.542632 -11: 594 T 0.776496 0.146885 8.516951 -11: 595 G -0.528327 0.134746 7.763270 -11: 596 T 0.895498 0.173567 9.419250 -11: 597 A -0.184997 0.154039 7.477814 -11: 598 A -0.961465 0.102563 9.379383 -11: 599 G -1.548730 0.173882 8.797525 -11: 600 T 1.606542 0.270099 8.372373 -11: 601 C 0.056409 0.138974 9.062668 -11: 602 T 0.865641 0.192260 9.394818 -11: 603 G -0.348534 0.163240 9.530728 -11: 604 C 0.161046 0.266937 15.063374 -11: 605 T 0.194787 0.502125 16.019983 - 8/19 Test #11: test_squiggle_r94 ................ Passed 0.43 sec + 9/19 Test #12: test_squiggle_r10 ................ Passed 0.13 sec test 14 Start 14: test_help @@ -89220,7 +89259,7 @@ 13: The vectorised math functions 'src/sse_mathfun.h' are from 13: http://gruntthepeon.free.fr/ssemath/ and the original version of this file is 13: under the 'zlib' licence. See the top of 'src/sse_mathfun.h' for details. - 9/19 Test #13: test_licence ..................... Passed 0.01 sec +10/19 Test #13: test_licence ..................... Passed 0.03 sec test 15 Start 15: test_help_events @@ -89251,7 +89290,7 @@ 14: such, may change drastically between releases and breaks backwards 14: compatibility. Newer versions may drop support of current features or change their 14: behaviour. -10/19 Test #14: test_help ........................ Passed 0.02 sec +11/19 Test #14: test_help ........................ Passed 0.02 sec test 16 Start 16: test_help_event_table @@ -89292,7 +89331,7 @@ 15: for any corresponding short options. 15: 15: Report bugs to . -11/19 Test #15: test_help_events ................. Passed 0.01 sec +12/19 Test #15: test_help_events ................. Passed 0.02 sec test 17 Start 17: test_help_raw @@ -89316,6 +89355,13 @@ 16: for any corresponding short options. 16: 16: Report bugs to . +13/19 Test #16: test_help_event_table ............ Passed 0.02 sec +test 18 + Start 18: test_help_squiggle + +18: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "help" "squiggle" +18: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 +18: Test timeout computed to be: 10000000 17: Usage: raw [OPTION...] fast5 [fast5 ...] 17: Scrappie basecaller -- basecall from raw signal 17: @@ -89353,20 +89399,6 @@ 17: for any corresponding short options. 17: 17: Report bugs to . -12/19 Test #16: test_help_event_table ............ Passed 0.01 sec -test 18 - Start 18: test_help_squiggle - -18: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "help" "squiggle" -18: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 -18: Test timeout computed to be: 10000000 -13/19 Test #17: test_help_raw .................... Passed 0.01 sec -test 19 - Start 19: test_version - -19: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "version" -19: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 -19: Test timeout computed to be: 10000000 18: Usage: squiggle [OPTION...] fasta [fasta ...] 18: Scrappie squiggler 18: @@ -89385,18 +89417,16 @@ 18: for any corresponding short options. 18: 18: Report bugs to . -14/19 Test #18: test_help_squiggle ............... Passed 0.01 sec +14/19 Test #17: test_help_raw .................... Passed 0.02 sec +15/19 Test #18: test_help_squiggle ............... Passed 0.01 sec +test 19 + Start 19: test_version + +19: Test command: /build/reproducible-path/scrappie-1.4.2/build_ssse3/scrappie "version" +19: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_ssse3 +19: Test timeout computed to be: 10000000 19: scrappie 1.4.0- -15/19 Test #19: test_version ..................... Passed 0.01 sec -5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } -5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG -16/19 Test #5: test_rawrgrgr_r941_call .......... Passed 14.62 sec -6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } -6: TCTGGTTTTTTATTATGTTTTATCTTCCATA -6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } -6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA -17/19 Test #6: test_rawrgrgr_r10_call ........... Passed 16.23 sec +16/19 Test #19: test_version ..................... Passed 0.01 sec 10: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa -- score 11581.230469 over 12818 blocks (0.903513 per block) 10: block pos 10: 0 -1 @@ -102217,24 +102247,30 @@ 10: 12815 -1 10: 12816 -1 10: 12817 -1 -18/19 Test #10: test_seqmappy .................... Passed 4.90 sec +17/19 Test #10: test_seqmappy .................... Passed 5.80 sec +6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 +6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } +6: TCTGGTTTTTTATTATGTTTTATCTTCCATA +6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } +6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA +18/19 Test #6: test_rawrgrgr_r10_call ........... Passed 16.93 sec 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.020645, "nblock" : 80790, "sequence_length" : 9342, "blocks_per_base" : 8.648041, "nsample" : 81106, "trim" : [ 200, 80990 ] } 7: CAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTAACCTGTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGGCTGAGGCAGGAGAATCCTTAAGCCAGGGCAGAGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAGAAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAAGAAATGTAGGCTATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTGGTGAGTATCTAATGAAAGCGTTCATTTAAGAATGTACAAGAAGCTATTTGTAGTAACTAGACCAGAGAAGACCTTGACAATATTTACTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGAAATAAATGCTATGCAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTAACAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTATTTCGCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGAAATCACTGCTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAGCCATATAATTACATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAAGTGTGTTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTTCACTTTTCATACAACTTTCTCACAAAGTTGATAAGTGTTTATTTTCTATTTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGGAAGTATCATTTCAGCTTTCCATCCATTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAGAAACGTTGTTGAAAACTTGAGGTAAGAATAAAATATTAAATATTTCTTTCTTTTAGTGTGTGTAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGTCTGCTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTACAATGCAATCATCAATAAGCTTAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCTAGCCATTGCTGCTTTAAGTTTTTCATTCTATTGTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCACTTGGCAGCTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTGAGTGCTTTCTCCATCTGCAAAGTTGGCTCATGGTGCTCTGCAATTACATAGTGCGTAGTAAGCACTCAATGTAGCTGCTGTATTGATGAGTATTGCCATACTCACGCTCATATCTAAACCAGAGATGGCAGTCTTTCTTTAAGGGCCGGATAACGAACATTTTGTGCTTGTGGACCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAGAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAGCAACAGTATGTGCAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGGGGATGCGTTTAGGATAGCATACTGAACTAGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTGTACTCACTCTTCCTGTTGCTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTTATACTCTACAAGGTCTTTCCTGATCCTCTGAGCTGTATCAGATGCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAATTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTAGATTTCAATTTATTAAGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTAAAAACACATATGCCTGGGCCTATATGCTGGACTTCAGAGATCTGAGTGTACAAGGTCTTGGTCAGGCATTTGCATTTAGAACCCCCTGAATGAAGTGCCCCAAAATATATGTTGAATAAAGCAATAAAACCCAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTATCACACTGTAGTTTCTGCATTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGACTCAGACGAGGCACTTAGAATATGCTTTGGCTTTAAAAGTCATGGATGGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAGAAAGAAAAAGCCTCCTTATTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTATTATTTGTACCAGAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTAAATAGAGGGCCTAGTTTTTGTTTTGTTTTGTTTTTAAATGGGGTCTTGCTCTGTGTGCCCAGGTTGGAGTGCAGTGTTATGGTCACTTAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTGTAGATGTGCACCACTTAGGCTAATGTCTAATTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGACTGATCTTGTGAACTCCAGGTCAAATAGTCCACACTCCCACCCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCCTTATGCCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTGACTTAGTAAACGTTTAATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAATATGCTTGATTTCTTTTCTTTTTTTAATAGTGACAGAGGTCTCTTGCTATACCTGTTGCCCAGGCTGGTCTAGAACTCCTGACCCAAAGCGGGATTACAGACATGATGATCCACCATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCCTCCAGGCCTGGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGGTTAGCCTTAGAGAGGGCTGTCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCCGTGGCTTCTCCATCCAGAGACAAATAAGAGAGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGATTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTAGTATGTTTTCTTCTTTACTTACAGTGTTTTGGTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTAAATAACCTGTGAAGCATTTAATGACTTTGTTCCTTGTTTAAACAAGTAAAAACCACAGCTAGTAATCTTAAAGATCGGAGCTGTATATATGTAAATATTCCGTTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGAAGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCCAATACAGCTTCATGAATTATTAGCATTGCGAGACAGACCTAAATGAATCAGGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAGAAAACTATACTGGAAGCACTTCATTTAATTTCTTAGGAGTGGATAGGAGATAAGTAAGACTTTAGAGTAACAAATATGCCTGTGGACACTCTGAAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAAGAACTGGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGTAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTAAGCATGGGAACCACCCCAAGATTCATTTGCCACCTCCCACCTGGTCTCTCCCTTACCCGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACCACACACCATTCCACTTGGCCTCTCCCAAATCTCATGTCGGTTTACTCACATTCCCAAAGTCAACTGTGGCTTCCCAATGGTCCCCAAAGTCTTGCTCATTCCAGCTTAATTAGCCCAGAAGTCCAAGTCCAAAGTACTCATCTGAGATAAGGCCAAAGTCCCTTCCATCTATGAGCCTATAAAATCAAAGAAGTAAGTTAGATTACTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCAAACAAAGGGGCTGTAGGCCCCAGAAAGTCTGCAATCAATAAGGCAGTCATTAAGCTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACATCCAGCCCACTGATGCAGAGTGGGCTCCCACAGCCTCATGCAGCTCGACCTCTGTGGCTCCATGCCTCACATCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTAACCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCACCATTCTGGGGGTCTGGAGGATGGTGGCCCTCTTCTCATGGCTCCCACTAGGCGGTGCCCCGAGTGGGGACTGTAGGGGTCCAACTGCCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCGCAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTTGCTGCAATGCTGTTACATGTAAGCCGCCAAGGCTTGGGGCTTGCACTCTCCTGGAAGCCCTGGGCTATACGCTGGCCCCTTACAGCCATGAGTGGGGATGCCAGGACGCAAGTTCCCGAGACTGCCAAAGCAGCAAGGCCCTGGCCACAAAACCATTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACCTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAATGGGTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTAAATGCTGGTTCAGTTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGCAGAGGCAAGAATGTACCCTTCTCTTTGCTAGAGCATAAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAATTTGCAAGCTTTCCACTTCTTCTGTCTTCTGAGCCTCCATCCTGTTCCAACACTGCCTATTACTCCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAAGACATTTATTTCTCACAGTTGGCTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCTGGCAAGGGCTTTCTTGCTGCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAAACAGAATTGGCAGAATCCTTTTATAATAAAGCCATTCTCAATAACCCACTCCCTTGGTAACAATATTGAATTATTCATTCATGAGGACAGAGCCCTTATATGGCTTAATCATCTTTTAATGCAACCTACTCTTCCAATACTGCCACACTACAGGATTAAGTTTCCAACACATGAACTTTGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAATTGGTAAGAAATAATGTGGTACTTTCTCCCACAACTTAATCAATGGATTGTAGGTGTAAAGTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCGAGTAAGCTCAGTGTTTTCATAGTAAAATCAGTTGGTGATTTGTTAGCATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCACATTTCCATCTTCTGGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACGTAGTCCTCACTTAACATCTCAGTAGATTCTTGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATGTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTGTTCACTGTGAATGTCATGGCCCAATAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATATTATCACCAGATGGGAAACAGGGTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAATATATTCACCGTATTCATAAAGGAATAAAAGATTTAGTTTAGACAAAACAATGCTATTCAATATATTCAGTTAATGTGGTATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAGAATTACTGTGGTGCTTAAAGGCTTTGACTCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGGAAGAGGTATAGAGAGGACAGGATAATAAGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGATGTCTACTCATTTCCCCTGTTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCATACTCATCACTATTTCCTGTTGCTGCTCTAGAGACTCTGCATCTGGTATCCAGGAGTTGGTATTGTCTTCATCTTGCCTTTTCAGTGTAAATCACCCTGTTTTTCCTCCTTATGCCCAGTAATAGGTGATCGTACATCCCTTCACAACAATTAGGACTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAGCTGAACTGGAAAGAGAATTGCTTTTGACATTTCTGCAAACATGTGATTCTTTTTAAATGTATTTCATTTGCAAGAGGAAATCTGGCAAAAGCATTTCTCATTTTTATGTAAGTGTTTATCTGATAAAGGGGAAGTTTAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCGGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCACCAGCAAATTGACCAGCAATACGTGATA 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.012573, "nblock" : 64090, "sequence_length" : 4696, "blocks_per_base" : 13.647785, "nsample" : 64395, "trim" : [ 200, 64290 ] } 7: GGTATTGCTTCGTTCAGTTACGTGTTGCTCTTGCCTACATCGCTCTATCTTCAGCGTCTGCTTGGTGACATACCCATGAAACTATAATTTTTTAACAATTGGAAATTCTTCAGTTTTTATGTACAACAATTTTATTTTCTAACTGTGAAAATATATGGACATCTGATTAGTTTTGTATATATTTGGCATATTGTTTAGCAATATTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCGTATGTAATCATGCGGTGTGAATAATGACGGTTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTTGCTTTATTGTCCCTGCTTGGCTAGATATTCTTACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTAATTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTTCTTTACTGGTGATTTTGACATTTTGTTGTCTCATCACCTGAGCAGTATTGCACTGTATCCAGTGTTGGCAGTCTTTTATCCCTTATCCTCCTCTGTTCCCCCAGAACCCTCAAGTCCGTTAACATCATTTATGCCTTTGCATCTCATAATTATACTGATGAAGAGATGATGTTTGGACCATTCCTGGAGGTTACTTCACTTAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTCTTTATTCACTCTTTGATTGATGGGCATTTGGGCTGGTTTCATATTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTACCTAGCATATACGATACGTATCTATTTCGTATAATGACTTCTTCTGGGCCAAAGGAGTAGGTCTAAGATCTACTTTTAGTTCTTTAAGGAATCTCCACACCATTTCACATTGTGGTTATACTAGTTTACATTCCCATCAAACATTCTTAAATTGTTTCCTTTTCACCAGTCACACCAACATCTATTAGTTTTGATTTTATTAGGGGCCATTCTTTCAGGAGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATAGTACAGGCCATTTGTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAGGTTTTCTCCATCATGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCTAAGCTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCGAAGTCTTTGCCTAACCCAATGTCTAGAGGTTTTTCAACGTTATCTTCTAGAATTTTTATAGGGTTCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTCAGGGATCAGTTTCATTCTTCGACATGCTTGGGTTTACCGAATTATTCAGTGTCATTTGTTGATAGGATATCCTTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCAGTTAACATAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGGTATAGTTTGAAGTCAAGTAATGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGGGAATTGCATTGGAATTTGTGGGTGCTTTTGGCAGTATGGTCATTTTCACAATATTGATTTTACTCATCCATGAGAATGGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAATATATATATATATATATTTGCAGCTATTAATAAAGGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGTATACTTAGGGCTACTGATTTGTGTACATTAATTTGTAATCCTGAAACTTTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTAGGGTTTCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCCTGGCTAGGACTTCAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCCTTGTCTTTGTTCGATCGCACGGGAAGTAACAACTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTGTCACAGGTGGTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGGACTTTAATCATAAAGGGATGCTGGATTTTTGTCAAATATTTTTCTGTGTTTATTGGGATGATCATGTGGTTCTTGTTTTTAATTCTGTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGAGTTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTGTTATGTGTCCTTTCCTGGTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAGATTCAGCTGTGAATCCGTCTGGTCCTGGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTAGGCTTATTTGGATCTTCTCTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAATAACCAGCTTTTTGTTTTATCTTGTATGTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTCTTTTTCTGCTGGGTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGTGTGACCTTAGATTGTCTATTTGTGCTTTTCAGACTTTAGATGTAGGTATTTAATGTTATCAGTTTCTATGTAGGTATAATGCTATGGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCGGTTTTGATAGGTTGTGTCACTACTATTGTTCAGTTGAAAGAATTTTTACATTTCTATCCTGATTTCATTGTTCACCCAATGATTTTTCAGGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTGAAGATTTCTTTTTGGGGGTTGATTTCCAATCTTATTCCCTATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTATATGTTCTATATTGGAGAATGTTCCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTAGGTGAATGTTCTCCACATATCACTGTAAATCCGTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTAGGGCTCCAGTATTAGGCACTTACATGTTTAGGATTGTGATATTTTCCTAGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTGTGTCCATTTATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTGGAGGCTGAGTCTAGTGAGACGGTAGATACTTGGTTAGTGGTATCCATTCTGCCATTCTGTATCTTTTAAATTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTAAATCATTGCATTATTGTTTATAAGATCCTGTGAGAGGTTAAACGCAAGCAGACGCCGAAGATG 7: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.041418, "nblock" : 28890, "sequence_length" : 2268, "blocks_per_base" : 12.738095, "nsample" : 29150, "trim" : [ 200, 29090 ] } 7: CGGTGCGCATTCAGCCAGCCCTACCTCATTCACCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTACGCCCTTCCGCCGAATCGCCTTCACAAAGCCTTGTTAGTCCCACATGGCCAGTGGCCGGATTGTCGGCTCCGTTTCGGAATGGACGTGGATCTAGTGTGATTGTTGGGAGCGGATGGAAAATCAGCGTGCCTCTCCACCAATCGATCATCGGGTGGTGCGGTGGATGATCGTTACTCGCCAATACAGATGAGAATCCGTTGATTTTGCAGCTCGATTGGGATCGGATGGTGCATTAATAGACCGGGTATCTGAACGGTGATGAATGGGAGAGACAGTGGAACCGGCATTAGGCGGGATAATGGGCGGTTGGAAGAAATGGAATGATACGGCTCATTCAATTTCACTTCATTCACCGTCATGATGAATGGTGTCGCATATCGCTTTGATGGCATCAGTATAATTCCGCCTTCTACCGATATCGAATCCAATAATTAGTAGGTGACTCAGCTGGATCAGGATTTGACGTCGCGGGTGGATGGGATGGGGTTTCGGATATTTGGAATGTCATTAGCCACCTCGGCTGCAGTGTCGTTTCGGTGATGGTGGTGGGGGGTGTGAAATCACCTTCGTCTCGTTGCGCCGGGAGAGGCGTTCAGATGGGGGTGGAAACGGGATCTGGGTATCGGACGAAAGGAGTGGATCAGCATGCATCGATTAGGCTGCATTTCCGCTCGACATGAAACGGATGACTAGCGTAGATCATTGGTGATGGGTGTGGGAGGGTGACATCAGATGGACTTGTAGTCTGGGATTTGGGTCCTAAAGTGGGATGACATACTCTGCATATCGTCGGTGGATCCGCTTGTGCGTGTCTGCTGTCAGAGATTTCGTGCGTTCAATGCGGTAATGGATGGATAAATGGTGGATGGTGGTTCGTTGGCGTGGAGCGGGACCTTTCACTGGGATGATACCTCCGGTGCGGTTGAACCTCGGTGGGTGCGATTCTGCGGTGGATTCTCTCGTCGTGCGGGTAATAATGATTTCGACTGGAATCGGAGGTGTGGAGTGGGTTTTGGTGCCGGATGGGTGGAATTCTCTCGTTGGCGTAGATGAGTGCGCTCTGCCGGTTTGGATGGTCATTGGAAATGTGCATGATGGGGATCAGGATGGATGGTCGGTGTGGGCCCTGTGCTTCATGAGTCGGTGGAAGACGATCGGATCAATTGTTGTCATTTCAGTCAAATGGAATAATTTGAGAATTTAAATTCCCAATTGAATTAGCCTGGATGGACAGGTAGAAAGCCTATGAAAAGCCCATGAAGTGGATGACTGGATCAGTCCTACCAGAATCGTATTAGTATTTCATTATGTCCTTCCACTAATAGATATTATTGATTATCTCCGATAAAATATATGAATGGGTGTGGATTTGTCATAAATCATTGTATCCGTTATTATAAGGAAATCGTTTGGTTGAGGGTGTCGTTGGCTCACTTGTACTTAGTATTCGTATATTAGTCATTTCCCTTTATCATCCCCAGTGTATACAATCTTAGCATCATCGTAATTTCGTTCATTCACCCACATTTTTGATGGCGTAAATCTCATAGAATAGATGGGTTGGGATTTCAGATGTCTGCATGGCCCGGTCAGTATGATGAACGGAGTATCAGATCATGAATCGGATGGTGGATGGGTCGGCCGATTAGATGGTTGTATTATCTCCCAAGAATGGACGTGGAGTGACAAATGGTAAGATGCAAGATGGATTGATACCAGCTTCATCAATCTAATTTTTATAGAATAAGAAAGTCGATCTGGGTGCCGACCGTGAACAGATTTGGAACGCTTGTCAGCCTTACTTATTCTCCAGATAGTGTATAGGTGAATGGTACAGGATAGAATATATGTGCCAGCTCAATCAGATCGTAAATCGTTATTCTTCAAATATAGTCTTAGTCATATTTACTCATCTGACCGAAATCAGATATCTTCAATATAGCGGCAAGTGGATAATGACAGTGTAGATGGTGGATGATAATGGAATGTTACTATCAATGGCGAATGAACCTTTCGAGAAATGGTAGAGCTAGTAGGTGGGAGAATTTGGCCTCCGTACCAGATAAATTTCAAATAAATTCATCATGGGCGGCTGGTGAACGCATCAGTGGAAAAACATATGGATGGATGGGATCGTATCGATGGTGAGCTATCAGCGAATCAGTGGCATTTCCAATCTCATGGGCGGGTGAAGGT -19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 60.04 sec +19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 74.24 sec 100% tests passed, 0 tests failed out of 19 -Total Test time (real) = 65.78 sec +Total Test time (real) = 84.94 sec make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' - rm -fr -- /tmp/dh-xdg-rundir-9Y9M_Gla - cd build_sse3 && make -j6 test ARGS\+=--verbose ARGS\+=-j6 + rm -fr -- /tmp/dh-xdg-rundir-ZsUUscIl + cd build_sse3 && make -j5 test ARGS\+=--verbose ARGS\+=-j5 make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j6 +/usr/bin/ctest --force-new-ctest-process --verbose -j5 UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_sse3/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_sse3/DartConfiguration.tcl Test project /build/reproducible-path/scrappie-1.4.2/build_sse3 @@ -102274,12 +102310,6 @@ 5: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "raw" "--model" "rgrgr_r941" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" 5: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 5: Test timeout computed to be: 10000000 -test 6 - Start 6: test_rawrgrgr_r10_call - -6: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 -6: Test timeout computed to be: 10000000 1: 1: 1: CUnit - A unit testing framework for C - Version 2.1-3 @@ -102430,12 +102460,12 @@ 1: passed 1: Test: Test mapping -- Viterbi with relaxed band2 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed -5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } 1: Test: Test mapping -- Viterbi with relaxed band3 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed -3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.325922, "nblock" : 16158, "sequence_length" : 9258, "blocks_per_base" : 1.745301, "nsample" : 81106, "trim" : [ 200, 80990 ] } 1: Test: Test mapping -- Viterbi with relaxed band4 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed +3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.325922, "nblock" : 16158, "sequence_length" : 9258, "blocks_per_base" : 1.745301, "nsample" : 81106, "trim" : [ 200, 80990 ] } +4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.295786, "nblock" : 16158, "sequence_length" : 9512, "blocks_per_base" : 1.698696, "nsample" : 81106, "trim" : [ 200, 80990 ] } 1: Test: Test mapping -- Viterbi with relaxed band5 equals Viterbi, local pen ...vit = -109.118820 vitB = -109.118820 1: passed 1: Suite: Functions on scrappie matrices @@ -102660,26 +102690,36 @@ 1: tests 71 71 71 0 0 1: asserts 506 506 506 0 n/a 1: -1: Elapsed time = 3.822 seconds - 1/19 Test #1: unittest ......................... Passed 9.30 sec -test 7 - Start 7: test_rawrnnrf_r94_call +1: Elapsed time = 4.762 seconds + 1/19 Test #1: unittest ......................... Passed 6.17 sec +test 6 + Start 6: test_rawrgrgr_r10_call -7: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 -7: Test timeout computed to be: 10000000 +6: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 +6: Test timeout computed to be: 10000000 +5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } 2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.273149, "nevent" : 16119, "sequence_length" : 9414, "events_per_base" : 1.712237 } -4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.295786, "nblock" : 16158, "sequence_length" : 9512, "blocks_per_base" : 1.698696, "nsample" : 81106, "trim" : [ 200, 80990 ] } 3: GCAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTATGTCTTAACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCAACTACTCTCCGGGAGACTGAGGCAGGAGAATCCTTAAACCCGGGGCAGGGTTGAAGTGAGCCGAGGTCTCACCTCATTGCACTCCAGCCTATGGGTGACAGGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAAATCAGTTTCCCGTAATTATTTTAGAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTAGTAGGTATCTAATAGAAAGCGTTCATTTAAGGAATAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATGTATTCTGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTATAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTTTATTTCCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAAGAAGGTAATATAAAAATGGAGTATGAACAAAATTGAAATCCTTTGCTATGAAGTTGAAAATACTAGTTTGTACATGTAAGCCTGTACGATAATAAAAATATAAATATATAATTTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTAGTTGAATATTTCACTTTTCACGTACAACTTTCTCACAAAGTTGATAGTGTTTATTTCTATTTTTGTATGTGCAGCCTCATATTATTTGTCTTTTCTCGTTAGAGTATCATTTCAACTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAACACAAACGTTGTTGAAACTTGAGGTAGAATAAAATATTAAATATTTCTTTGCCTTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCTGGAAATGCAAAATTAGAACATGCCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTTTCCTCATCTTCCCTCATTTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTAGCAAGTTTTTCATTCATTGTTTTTTTTCCATGTATTTCTGTAAGCCTCTTGTTGCAATCTTCACCTTGGCGTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGGTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTTTTCTGCAGTACATAGTGCGTAATGGCCTCAATGGTAGCTACTGTATTGATGGAAGTATTGCCATACTCCCTTCATATCTAAACCAGAGATGGTGATCTTTCTTAAGGGCCGGATAACGAACATTTTTGTGCTTATGGACCACGTAGTTTCTGTCTCACCTGGCCCGGCTCTACTGTATTGTAGAAGCAGCCATGGGCGTCTCTATGTGAATGGGCGTGACTGTGTTTTCAAAAGCAACAGTATGTGCAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTGGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCGCTCTTCCTGTTGCTTTGGCAATGCTTATTTATTTTTGCCAGGTTTTCTTCCTTATACTCTACAAAGGTCTTTCTGATCCTCTGAGCTGTATCAGATGCCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTATGTTTCCCTGACTTTGGGTGTGAGTTCTTGAAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTATTAGGTTGTAGATTTCGAGCTTTTGATCTCAAAGATCAGCTGTGCATTTAAAAAACACATATGCCTGGGCCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCTAGATAAGAAGTGCCCCCAAAATATATATTGAATAAAAAGCAATAAAACAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTATTTACTAACTTCTGATACAGACTCAGACAGGCACTTAGAATAACTGCCTTTAAAAGTCATGGATGTTCAAATGCCGTAATGGAACACTATTCACCAACAGAGATGTTGTGGACTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAAAGTGAGTTAGCAAATGCTGTTAGAAACTGTCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACAGTTCCATTAGTATTTGTGCCAAGTGCCACAAGTTATCTTCCTCAAGAATGAATCTGCTTTTGTGATCTTATTTGAGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTAAGGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGCTTCTAGTTTTTTTGTTTGTTTGTTGTTTTTAAATGGGGTCTTGCTCTGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGGTCTCACTGTGTTTCCCAGGCTGATCTTGTGAACTCCGGTCCGTAGTCACGCCCACCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCTTATGCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTCTTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCTATACTGTTGCCCAGGCGGTCCTAGACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATCCTATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGACCATAGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTGTAGCCTTAGAGAGGGCTGTCCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTGAGGGCCACTGAGGGTCATGGTGGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGAGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTCTTCTTTACTTACAGTGTTTTTGGTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACGGCGTGAGGGCTGCTTTTGGAACAAATTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTGAAACATTTAATGACTTTGTTCTTGTTTAAATAAGTAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATTGTAAATATTTCATTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATATTCCTTATCAAGGAAGCTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATATGATAAGTGATTGTCACCAGATGCAAAATATTGACTGTGTGTCAATACAGCTTCATGAAATTATTAACATTGCCTTGAGACAGACCTAAATGAATCAAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCCAGATAGAGATTATATAGAAGTAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTAGAAACACTTCATTTTAATTTCTTAGGGAGTGGATAGGAAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAAGACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTTTGCAACATGGGAACCACCCCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGAACGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAATCTCATGTCGGTTCCCTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTCCAGCAATTAGCCCAAAGTCCAAGTCCAAAGTCTCATCTGAGATAAAGGCCAAGATCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAAGGGCTGTAGGCCCCAAAGTCTGCAATCCAACTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCGCATCCAGCCCACTGATGCAAGTGGGCTCCCCACAACCTCATGCGAAAAGCTCTCGACCTCTGGCTCCATGCCTCATCCAGCCCACTGATGCAAGAGTGGGCTCCAGCAATCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTACCTCTCTGCTGTTTTCACAGGCTGGCGTTGGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCTGCCATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCCACTAGGCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCATAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCAGGCATTTCTATACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTGCTGTGCACCACATGTAAGCCGCCAAGGCTTAGAACTTACACTCTCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCAAGCAGCAAGGCCCTGGCCCACAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATAGGCTGCCACGTGAAGACCTTGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAAATGGGTTTTTTCTTTCTACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGGAATCAGCCAGGTCACCTGTTGAGATGCTTTGCTGTAGAAATTTCTTCCACAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAACAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCAACCATCTAACAAGTCTCTAGGAAATTTGCAAACTTTCCACTTCTTCCTGTCTTCTAGGCCCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCGAACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGTGGAGGTTAGGAAGTCAAGGTTGAGGTCCCTACATCTAGCAAGGGCTTTCTTGCTGCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAAACAAGTGTAGAGATCCTTTTATAATAAAACCATTCTCAATAACCCCTCCTTAGTAACAATGAATTATTCATTCATGGGGATAGAGCCCTTATGTGAAGCAATCATCTTTTAATGCAGCTTCTCTTCCAATACTGCCACTACAGGATTAAGTTTCCAACATGAACTTTGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCGCCGTTACAAATTAGTGAAATAATGTAGTACTTTCTCCCACAACTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTATATTTGTTAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTCTCTGTAATTATAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACAGTAGTCCTCATAACATCTCAGTAGATTCTTGGAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTATTCTGTAGATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATTATCACCAGATGAGGAGAAACAGGGTTTTGCTTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCATATTCACCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGGTGCATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTGTAAAGTATTGACAGTAATATTATAATAAAATGTCATCACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTGCCCAAGGCTTTGACTCTAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGGTATAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCCGCGCCTCATCCTATTTTCCTGTTGCTTGCTCTAGAACTCACCATCTGGTATCCAGAGTTAGGTATTGTCTTCATATTGCCTTTTCAGTGTAGAATCACCCTGTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCGGCCATCCCTTCACAACAATTAGGACTTTCACCGTTTTTAGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAGTGCTGACATTTCTGCAAACATGTGATTTTTTAAATGTATTTCATTGCAAGAATCTGGCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGAAGTTTAAAATATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTAACCAGCAATACGTAGT 3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.319873, "nblock" : 12818, "sequence_length" : 4612, "blocks_per_base" : 2.779271, "nsample" : 64395, "trim" : [ 200, 64290 ] } +4: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCATGGTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGTATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTCACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCAAAATATATATTGAATAAAACAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTAATGTGTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAATGAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTGCAAGCATGGGGAACCACCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGGGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGTTCCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC +4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.179309, "nblock" : 12818, "sequence_length" : 4723, "blocks_per_base" : 2.713953, "nsample" : 64395, "trim" : [ 200, 64290 ] } 5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC 5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } 3: CTTCCGTTCGAGTTACGTGTTATCTTTGCCTGCAATCCATCTATCTTCGGCGTCTGCTTGGGTGACATACCCATGGAAACTATAATTTTTTTAACAATTGGAAATTCTTCAGTTTTTATATTTAACAGTTTTTGATTTTCTAACTGTGAAAATATATGGACCTGATTAGTTTTGTATATTTGCGCAATATTGGCTAACAATATTTTTCTGAATTTACTTACTAATTCTCCAGCATAGATTCTTATGGGACTGTCATATATTAATCATGCGATTATGAATATGTGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTGCTTTATTGTCCTGGCTGGAATATTTCGCACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTTAGTATTTCAACAGGTTTTTGGGAACTGGTGATGTTTGATTACATGGAATCACGGTTCTTTACTGGTGATTTGACATTTTGTTACCATCACCTGAACTTGGTATTATCCAGTGATTGTAGTCTTTTATCCATATCCTCCTCACCCGTTTCCCCAGTCCTCAAGTCCGTTAGCATCATTTGCCACCTTTTGCATCCTCATACTGATGAAGATGATGTTTGTTTCATTCCTGAGTTACTTCGCGAATGTGATCTCCATTCCATTCAAATTGCTGAAAATGCATTATTTCGTTCCTTTTTGTGGCTGGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTGATGGGCATTTGACTGGTTTTCATATTTTTTCCAATTGCAAATTGGTGCTGCTATAAACGCCATTTTGGCACTGTACATTACGTATCTATTTCGTATAATGGCTTCTTCTGGGCCAAGGTAGGTCTAAGATCTGCTTTTAGTTCTTTAAAGATCTCCTTTACGGCTAATGGTTATACTGGATTTACATTCCATCAACATTGTTAGGTGTTTTCCTTTTCACCAGTCACAACATCTGTGTTTTGATTTTTTTATTAGGGGCCATTCTTTCAGGGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTTTAATAGGTTTGAGGCCATTTATATCTTCTTTGAAATTGTCTATTCATGTCCTTAACTTTTTGATAGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAATTTTCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTAGTTGGGTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCAGAAGTCTTTTACTAACCCAATGTCGAGGTTTTTTTCAACGTTATCTTCTAGAATTTTTTTACCGGGTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTGGATCCAGTTTCATTCTTCGACATGGCAGGTTTGAGTGATGTCATTTGTTGGTCGGGTCCTTTCCCCACTTCATATTTTGTTTGTTTGTTGAGATCTTGAGATTGGCTGTACGTGTTTAGCTTTATCTCTTGGTTCTCTATTCTCTTCATTGGTCTTATGCCTGTTTTTTATACCAGTACCATGCTGTTTTTGCTGATGGTGGCCATTATAGTTTGAAGTCAAATGTAATTACCTCAATTTGTTCTTTACTTAATCTTTACTTTGGCTGGGGCCTCTTTTTGGTTCCATACCGATTTTAGGATTGTTTTTCTCATTCTGTAGAATATTAGGTAGTATTTTTGATGAGTGCATTAGATTTGTAGGTACTTTTGGCGTATATGGTCATTTCTATGTGATTTACTCATCATGAGAATGGATGTATTTCCATTTGTTGTGTATGATTTCTTTTTTTCAGCAGTGTTTTGTTGTTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAGTATAGTCAAATATATATATATATATATATATTTACGCTAATATAAAGTTGGGGATTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGGCTATAGCGGGCTACTGATTTGTGTACATTAATTTTGTATCTAGGCTTTGCTGGAATTCATTTTAACAGTTCAGGAACTTTTAGTTTGGAGTCTTTTGGGTTTCTAGGTATACGATCATATCATCAGCAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTACTCTGGCTGGGACTTTATGTTGAAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCCGCACGGGAAATGCTTTCTTTTTCCATTAAATGTCTAATGTTGTTGGCTGTAGGTTTTGTATCACAGGTGGTTTTTATTACCTTAAACGCCTTCTACGTAGATTTTACTGGGGACTTTAATCATAAAAGGATTACTGGATTTTTTTTGTCAAATATTTTTTTCTGTGTTTGTAGAGATGATCATGTGATTCTTATTTTTAATTCTGTTTTTATATTTATATCATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCCTAGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTAATACGTGGATTTGGATTCAGTTAGCTAAGTATTTTTATTGAGATTTTTGCATCGTTAATCAGTGATGGGTCTCAGTTTTATTTTTTTGTTATAATGTCCTTTCCTGGTTTTGATATTACAGTGATGCAGCTTCATTGGATGATTTAGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGGATTGGTACCAATTTTTCTTTGAATACCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAAACTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGTTGTATCTTTCAAGAATTTATCTCCTCTGAGTTTTTCGTTTATATTACGCCCACAGAGTGTCATAGTAGCCTCCGTGATCTTTTGTATTTCTGTATGCTGAATTTGTAATATCTCCCATTTCATTTTAAGTAAACTTATTTGGATCTTCTCTTTTTTTTTTTTCTTGGTTAATCTTACTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTGTTTATCTTTTTTTTTTTTTGTATATTTTTGTTTCAATTCCGGCTTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTCTGCTGGGTTTAGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGTGTGACCTTAGATTGTCTATTTATTACTTTTTCAGGGCTTTAGATGTAGGTTAATATTCTCGATTTCTATTATGTAGGTATAATGCTATAGAGATTCCTATTCTGGTGTATTTCGAGATTTGTTTTCAGATTTGGGGAGCTCCTTTGCTTGGTTTTGTAGTACTCAGTATTTGTCTGAAAAATACTATCTTCCTTCATTTATAAACTTAGTTTCCTGGATACAAATTCTTGGCTATTTGTTTAGTTTAAAGACTACCGGTAGGACCCCAATCCACTTGTCTTTGCTGTATCCCAGTTTTGATAGGTTGTGTCCTACTATTGTTCAGTTGAGATTTTTTATTTCTATCTGGTTCATTGTTCACCCAATGATTTTTTCAGGATTGTTAATTTGATGTATTTGCAATGTCTTTGAAATTTCTTTTAGAGGTTGGTTCAATCTTAATTCCTATAGTCTGACATAGTACTTGTCATTTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTAGCCTATATATATTTCTATATTAGAGGAATGTTCCATGTGCTGATGAATAAGTCTTATGTTTATTTGTTATTGCGTCTTCTCCCTTATCCCTGTAAATCCGTTGTTGTAAGGAGTGTAGTTTAAAGTACATTGTTTTTCTTTGTTAACTTTTCTATCTTGATGATCTGTATCTAGTGCTGTCATTAGATGCTAAGTCCCTATTGCTGTGTTACCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTGGGGCGCTCAGTATTAGGCACCCATGTTTAGGATTGTGATATTTTTCGTTCGTCCTTTTATCATTATAATGTCTCTCTTTGTATTTTTTACCGGCTGTTGCTTCGTTTGTTTTGTCTGATACAGAATAGTTATTCCTGCTTGCTTTTTAGTGTCCATTGCATGGGATATCTTTCTACCTTTACCGTATATGAGTCCTTAGTATTGGTGAGTCTAGTAGAGACAGTAGATACTTAGTTAGGTAATTCTCCATTCTGCCATTCTGTATCTTTTTAGGTGGAGCGTAGGCCATTTATTCAGTGTTAGTATTGAGATGGTACTATTCTATTCATCGCGATATTTGGTGCCTAGATACCTTGGTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGAGGATTAAACGCAAAAACGGAACGCCGAA 3: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.590575, "nblock" : 5778, "sequence_length" : 2399, "blocks_per_base" : 2.408504, "nsample" : 29150, "trim" : [ 200, 29090 ] } -4: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCATGGTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGTATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTCACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCAAAATATATATTGAATAAAACAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTAATGTGTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAATGAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTGCAAGCATGGGGAACCACCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGGGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGTTCCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC -4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.179309, "nblock" : 12818, "sequence_length" : 4723, "blocks_per_base" : 2.713953, "nsample" : 64395, "trim" : [ 200, 64290 ] } 3: TCGGTGCGCATTCAAGCCAACCCTACCTCCTTCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTCGCGCCCCTTCCGCTTGAATCGCCTTCACTAAGTATGTTGGTCCCACATGATAATTCGTAGATTGCATCGACTCCGTTTCCGAATGAACGTGGATCGGCATTTCAGTAGTAGGCTGGGGCGGATGGAAAAATCAGCGTGCCCTCTCCACAATCGATCATCCGTTTGTCGGCCGGTACGGTAGGACCAGTCGAACTACTCAACCATTACCTAGATGAGGAATCCGTTGATTTTGCATCGTTGGGATCAGTTGGTAAATTCAATAGAATAGTTGTCCTAGACAGGTTGATGGATGGGAGAACAAAGCGGGGCCATGGGCGGGATAATGGGCGGTTGGAAATGGGATACAGCTCCATTCAGCCCTACACTTCCATTCCTCGTATGCTACGATGAATCAGGCCATGCATATCGCTTTTATTGGCCATCAGTATAATTCCAGCCTACCGATATCGATCCATCCTAATTAAGTAGGTGGCTCTCAATGGATCAAGAGATTTAAACATCACAGGTAGGATGATCGTCAGGACTCAGACCTTCAGGAATAATCATGCGCCACCTCCTTTCACATGTCATTCAGTGTGGTATGGTAGGGTAAAATCACCTTCATTCGTACTTGCCTTCAGGCGATTTCAGATAGGTTTGAAACGAATCTGTTGGTATCGGACGAAAATTGGATCAACATACATCAGTAAACTGCATTCCGCTCGACATAGCTCTGGACTTTAGCATAGATACATTAGGCTGGCATGAATTGTGGGAGGAGCCCTCGGAATGGACTTGTCTGGGAGAATTTGAGATCCTAAAAGTGAGATGGCACTACTCTACTCCTCGTCGATGGATCCGCTTGTACAATACAATCCAATTTCTAGATGAATGAAATAGTAGGTGGTTGTGGGCCAGCATGGAGCAGGACCCTTCACTACAGCCACCTCCGATGCGGGGTTCATTGAGGTGCATTCTGCGTGCCTCTGTCGTGCAGGTACCTTAATAAGCCGGGAGGCATTTCAAAGCTGAATCAGGAGGTAAAAATGAGTAGGATTTTAAGCCGCCGAATGGGAAGAACATCCTCTCGTTACCGGCGCAGAATGCACTTCCTGCCGGCCAGGCCAGTCAAAATGTACGCCAGCCAGGAATCAGGAATAAAGACTCAGTCAGTGAACGGCGAGCCCGCGCTGTGCTTCCGCCACAGTGGTAGAAAAACGTCCAGGATCAAATTACGTATTTCAATTCCGTGGAACAATTTGAAAGGCTAAAGCCTAGTAAAATTCAACTGGACGGACAGAGCCCGGAAAAAGCCTCCCTACCCCACTTCAAAGCGGAATGAACGCGGGCTCAAACCCTACAAAATCGCGTATTAAGTAACATTTCGCCCGTACTACACTATCAATCAGCCATTACCTCCGTAAAATACCAAATAGGTGAGAAAATTTGCATCCGCCATCGTACAGCCATCAAATTAGCCCACTCAAAATGGAATTTTGGATGAAAAAGGTATCATTCGACTCACCCCCTTACTTAATATTACGCTGCTCGCGTAAATATTTCCCTTTATACCATCCCAATGCATGCCCAATGCTTAGCATCATGTATTTCGACTCAACACCCACCATGCGCGATGGCGTAAATATAGAAACCAGATACGAGATTTCAGGCATGCCACGCCAGCGGTCAGTATAAACCGGGCAAAATCAAATAGCCGCCAGGCTCCGGACGGTGAGGCGAGATACCGGGTAGATGGGCTGGCGCGCTACATACTCCCAGAAATAGGGCATGGAAGCGCTCCATCGGCGCGATACCAAGATGGGCCGGCACCACTTCACGCCAGCATCTAAATTTTGCCTCGATAAAAGAAATCGTCCCCGACGGTACCGACCCATGAACAGGCATTTTGTTGCCCCGTCGCGCTTGCCACCCATTCCAAAATAGGTGGCGCCAGTACGAAGCGGGCTGAGCTAAACGCGCGCACCGCTCAATGAATCGCATCATCAGCCTTCATCCTCGTACCAGATACCATGGCCTCCTCCACAGCCCGAAAATAGCAAATATCCCTTCAATATGCGCTGATGGGCTGGAAACAGTATGAATAGGCGGGCGGGCCAATGGAATGGCTATCAACAGCCAGCGAATGAACCGCTTCCAATAGGTAGAGCTAAATGCGCGGAGAAATTTGGCCTCCCGTACCGGCCAAACCTAATCAAAATTCTCCTTCGACGGGCAGCTACAGGCGAACAGCGCCAGTGAAAAACATGCGGAGCGGATGGGGTCCGTATCGCTTCGACGAAACTGCCTCCAGCAGGAAAATCAGCTGTCTCATGAAGCGGTGCGCATGAAA - 2/19 Test #3: test_raw_call .................... Passed 17.54 sec + 2/19 Test #3: test_raw_call .................... Passed 11.88 sec +test 7 + Start 7: test_rawrnnrf_r94_call + +7: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 +7: Test timeout computed to be: 10000000 +4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } +4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG + 3/19 Test #4: test_rawrgrgr_r94_call ........... Passed 13.31 sec test 8 Start 8: test_event_table @@ -107264,6 +107304,8 @@ 8: 4573 23565 0.000000 2.000000 1072955590 8: 4574 23571 -2.000000 -0.000000 1073230087 8: 4575 23576 0.000000 -0.000000 1073683897 +2: GTTACGTATTGCTCTTGCCTGTCTAAATACAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCCAGCTACTCTCAGGGAGCTGAGGGCAGGAGGAGATCCTTAAACCCAGGGCCAGGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAATCGTTTCCGTAATTATTTTAGAAATGTAGATATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTATTTCTCTTCGATTGCCTCATGGTTTCAGCATTTGAAGTGAGTGTCTAATGAAAGCGTTCATTTGAAGATAGTACAAAACTATTTGTAATTAACTAGACCAGAGAGACCTTTGACAATATTTTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTCTGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAAGTGAGTATGCATAGTTCAAGTAGTCTATAGGATTTTCCCTAAGAATGAGGACCTTGAAATTCCTTTTAATCTTTTGATTATGCTTTATTTCGCTTAGCATTAAAATGTATAGTGAAGGAAGTTGTGGCATCGCAGGGGAGATAGGAATCTTTAAGAAGGTAATATAAAATGGAGTATGAACAAATTGGAAATCACTGCTGAAGTTAGAAAATACTAGTTTGTACATATGTAAATTACCAACTGCGATAATAAAAAATATAAATATATAGTACATAATAAAATATGCCAAATATGTTACATACACACATTTTAATTTCATAACAAAGAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTGGATTGAATATTTCACTTTTCACATTACTGCTTTCTCACAAGGATTGATAGTGTTTTCTATTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGAGTATCATTTCAGCTTTCCATCCATTTTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAAACACAAACGTTGTTGAAACTTAGAGGTAGAATAAAATATTAAATATTTCTTGCCCTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATAATATCTTTCTCCGCGGATGGTCTACTTTCTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCATTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCACATTATTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGGATTTTCATTCATTGTTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCTTGGCCTTAGGCCATGCAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTAGGCTGAATTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCCTGTGCTCTGCAGTACATAGTGCGTAGTGGCCTCAATAGCCCAGCTGCTATTGATGAGTATTGCCATACTCACATTCATATCTAAACCAGAGATGGTGATCTCTTTCTTAAGGGCCGGATAACAGACATTTTGTGCTTGTGGACCACGTAGTTTCATCTCACCTGCTTGACTCTACTGTATTGTAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTAATACAGTTCCTGCTGTCTTACTTTCAAAATACATGGCACATATTGCTCCCTACTTGGAATGGCTTTCTACTCTCACTCTTCCTGTTGCTTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAATTGTATCAGATGCCCCTGTTTTGCAACCTTAGCACCTGTCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTTGTGTTATGTTTCCCTGACTTCTGGGTGTGAGTTCTTAGAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTAGGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTCCAAAAAAAACACATATGCCTGGGCCTATATGGACTTCAGTCTGAGTGGCTACAAGGTCTTGGTGGGCATTTGCATTTCTAGAACCCCTGAATGAAGTGCCCCAAAATGTATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTGGACTGTATTCCATTTTTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGCTCAGACAGGCACTTAGAATATGCTTTGCTGGCTTTAAAAGTCATGGATGGTACAAATGCAAGCATGGGAACACTATTCACCAACAGAGATGTTGTGGTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTTGACACTGTTATTCAGAGAAAGAAAAGCCTCCTTGTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCGTGTATTTGTACCCAGAAGTGCCACAAGTTATCTTCTCAGAATGGAATCTGCTTTTGTGATCTTATTTTGAGGGGATAGACTGTAATGGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTTTAAATAGAGGCCTCTAGTTTTTTTTTGTTTTGTTTTGTTGTTTTTTTAAATGGGGTCTTGCTCTATGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCACCCAGGCCTGTCTAATTTTTTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGGCTGATCTTGAACTCCGGTCAAAGTAGTCACACTCCCACCCATCCTAAAGCACTGGGATTACAGGCAGGGAGCCTTATGCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAGCGTTTGCATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTTTAACATTCAATATGCTTAATTTCTTTTTCTTTTTTTTTTTTTTTTAATAGTGACAGAGGTCTCTTTTCTCTGTTGCCAGGCAGTCCTATGAACTCCTGACCCAAAGCCTTGGGATTACACAGACACTGGTGTCTATGCCTGGCTGATTTCTTTATAAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAGAAACGAAGTGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTTAGCCTTAGAGAGGGCTGTCCAACTTGATCTTTGGTAGAAGAGTATCCACTGCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGTCCAGATGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTATTATGTTTTTTCTTCTTTACTTACAGTGTTTTGGTTTCGTTTCAGCAGCTCCCACACATGTGTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCCTTGTTTAGTAAGTAACCACAGCTGAAAATCTTAAAGATCAGGTATATATGAAGTAATTTCAGTTTGATTAGATCATCTCTTATCTTGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAAGTCTCCTTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTAATAGAAAGGTATGACACATACACATTACATGCAGAATATGATAGAAGTGATTGTCTGGATGCAAAATATTGACTGTGTGTCCAATACAGCTTCATGAGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGGTATTCTAGGAAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAAATAGTCTAGTTTTAGTGGGGTTATAAAGTATGACGGGAGAAAAAAGAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAGAAAACTATACTAGAGCACTTCATTTAATTTCTTAGGGAGTGGATGGAAGTCAAGTAAAGACTTTAGGTAACAAATATGCCTGTGGACCTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAGGAACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGGAAACTTATAATCCCAGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAAAAATCGTCAGATCAGATGTAGACTCCCACTATCACAAGAACAGCAAGCATGGGGAGCCACCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACACACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTCACATTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTTCCAGCTTAATTAGCCCAAAATCCAAGTCCAAAGTACTCATCTGAGGGATAAAGGCCAAAGATCCCTTCCATCTATGAGACTATAAAATCAAAGGAAGTAAATTAGATTGCTTTCTAAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAGGGGCTGTAGGCCCCAGAAAGTCCTGACCAGCTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGGCTCCATGCCTCACATCCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCTTACTCTCTGCTGTTTTCACAGGCTGGCGTTGAGCCTCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCCTGCCATTCTGGGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTGAGCGGTGCCCCAGTGGGGACTGTAGGGGGTCCAACTACCCCACATTCCCCTTCTGTACTGCCCTAGTAAGGGTTCTCCACTGGGGCCTGCACCTACAGCCAGCTTCTGCCTGGACATCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAACGTTAATTCTTGATTGCTGTGCACCAGGCCCCACATATAAGCCGCCAAGGCTTAGAACTTACACTCTCTAGGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCCAAGCAGCAGGCCCTGGCCTAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATGGGCTGCCACGTGAAGACTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGGATTTCTACTCCCAGAAATGGGTTTTTTTTTCTTTCTACCTCATGGTCCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGGATATGCTTTCAGAATCAGCCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGATACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAACCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTAGCCCTCCATCCTGTTCCAACACTACACCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTGGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCACAGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAGAACAAAATTGGCAGAGTCCTTTTTTATAATAAACCATTCTCAATAACCCTCCTTGGTAACAATATTGAATTCATTCATGAGGAATGAGCCCTTAACCAGAGCAATCATCTTTTGGCTAAGCTTCTCTTCCAATACTGCCACACTACAAGTTAAAGTTTCCCAACACATGAACTTTGGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTTGTTTTGTTTTTTTTGTTTTTTCAGAGTTCTAGATAAAGCAAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTATATAGTTTCTTAGATTACAAATTGGTAAGAAATAATGTGATACACTTTCTCCCACCTTAATCAATGGATTGTGAGGGTGTAAGTTTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTTTTCATAGTAAAATCAGTTGGTGATTTGATAGCATTTATTCTTCAATTATTTTAGCTTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAAAGTTTTAGATGTTGCTAAAATAAATGTGAAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCACCAAAGTACGTAAGTCCTCACTTAACATCTCAGTAGATTCTTGGGAGTACAGCTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTAATTCTACTGTGAATGTCATGGCCCAATAAGAAAAGGACAGGGGCGGACTTACTAGGCATTTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGCTAATAGTTTGAATAGGAAAATTGGTGAGGAAATAGCTGTAGTTGTTTCCAGGTGAGCTCACTTATTCACCCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGAACATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGGAAGCATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTAACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTAACTGGCCATTTCTGCCTTTCAAAAAAATTAAATACATTACTCAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTTGCCCAAAGGGCTTTGACTCCACAAGTTTACTTTTTTTAGTAATAGTTGAGGGACGAGGAGAGGTATAGAGAGGACACAGGATAATAAGTGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTGCAAGGACTCAAGATCTATCTTCTTTTAGTGGAATGTCTACTCATTTCAGCTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCATACTCATCCTATTTTCCTGTTGCTTTGCTCTAGAACTCTGCATCTGTTATCCAGGAGTGCGTGTCTTCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCAGCCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTGACATTTCTGCAAACATGCTTGATTTTTTTAAATGTATTTCATTTGCAAGAAATCTGGCAAAAGCATTTCTCATTTTTTTTTATGTAAGTATTTTATCTGATAAAGGGGAAGTTTAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCGGACGATGAATAGACAAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAAATTAACCAGCAATACGTA +2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.175321, "nevent" : 12397, "sequence_length" : 4584, "events_per_base" : 2.704407 } 8: 4576 23584 -0.000000 -26815622286132155105738587724974707583279704097314794699613366598123150807197729365849497291739423777176841561817115264035234555350906294364206622297817088.000000 1075075456 8: 4577 23588 -0.000000 -2.000000 1072386731 8: 4578 23592 0.000000 -0.000000 1072426984 @@ -108685,16 +108727,6 @@ 8: 5994 31015 -2.000000 0.000000 1072033272 8: 5995 31019 -0.000000 -0.000000 1074090466 8: 5996 31024 -26815615859885194199148049996411692254958731641184786755447122887443528060147093953603748596333806855380063716372972101707507765623893139892867298012168192.000000 26815622287103319190269875103108984992963283727466198797096481707737965444844855815603180480567133750767821699573562887810003205063924991387969585567236096.000000 1073206556 -5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } -5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG - 3/19 Test #5: test_rawrgrgr_r941_call .......... Passed 17.77 sec -test 9 - Start 9: test_mappy - -9: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "mappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" -9: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 -9: Test timeout computed to be: 10000000 8: 5997 31028 -0.000000 0.000000 1073071619 8: 5998 31032 0.000000 26815622286885000189366008962446147689749026991156044646135647524584046512728111049032964251648426582999484456274944162497775011332455845658414867036504064.000000 1071709873 8: 5999 31035 0.000000 -0.000000 1073157227 @@ -115095,15 +115127,13 @@ 8: 12394 64075 0.000000 0.000000 1072576662 8: 12395 64078 -2.000000 -0.000000 1073238564 8: 12396 64083 0.000000 -2.000000 1072952450 -2: GTTACGTATTGCTCTTGCCTGTCTAAATACAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCCAGCTACTCTCAGGGAGCTGAGGGCAGGAGGAGATCCTTAAACCCAGGGCCAGGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAATCGTTTCCGTAATTATTTTAGAAATGTAGATATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTATTTCTCTTCGATTGCCTCATGGTTTCAGCATTTGAAGTGAGTGTCTAATGAAAGCGTTCATTTGAAGATAGTACAAAACTATTTGTAATTAACTAGACCAGAGAGACCTTTGACAATATTTTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTCTGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAAGTGAGTATGCATAGTTCAAGTAGTCTATAGGATTTTCCCTAAGAATGAGGACCTTGAAATTCCTTTTAATCTTTTGATTATGCTTTATTTCGCTTAGCATTAAAATGTATAGTGAAGGAAGTTGTGGCATCGCAGGGGAGATAGGAATCTTTAAGAAGGTAATATAAAATGGAGTATGAACAAATTGGAAATCACTGCTGAAGTTAGAAAATACTAGTTTGTACATATGTAAATTACCAACTGCGATAATAAAAAATATAAATATATAGTACATAATAAAATATGCCAAATATGTTACATACACACATTTTAATTTCATAACAAAGAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTGGATTGAATATTTCACTTTTCACATTACTGCTTTCTCACAAGGATTGATAGTGTTTTCTATTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGAGTATCATTTCAGCTTTCCATCCATTTTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAAACACAAACGTTGTTGAAACTTAGAGGTAGAATAAAATATTAAATATTTCTTGCCCTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATAATATCTTTCTCCGCGGATGGTCTACTTTCTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCATTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCACATTATTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGGATTTTCATTCATTGTTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCTTGGCCTTAGGCCATGCAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTAGGCTGAATTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCCTGTGCTCTGCAGTACATAGTGCGTAGTGGCCTCAATAGCCCAGCTGCTATTGATGAGTATTGCCATACTCACATTCATATCTAAACCAGAGATGGTGATCTCTTTCTTAAGGGCCGGATAACAGACATTTTGTGCTTGTGGACCACGTAGTTTCATCTCACCTGCTTGACTCTACTGTATTGTAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTAATACAGTTCCTGCTGTCTTACTTTCAAAATACATGGCACATATTGCTCCCTACTTGGAATGGCTTTCTACTCTCACTCTTCCTGTTGCTTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAATTGTATCAGATGCCCCTGTTTTGCAACCTTAGCACCTGTCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTTGTGTTATGTTTCCCTGACTTCTGGGTGTGAGTTCTTAGAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTAGGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTCCAAAAAAAACACATATGCCTGGGCCTATATGGACTTCAGTCTGAGTGGCTACAAGGTCTTGGTGGGCATTTGCATTTCTAGAACCCCTGAATGAAGTGCCCCAAAATGTATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTGGACTGTATTCCATTTTTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGCTCAGACAGGCACTTAGAATATGCTTTGCTGGCTTTAAAAGTCATGGATGGTACAAATGCAAGCATGGGAACACTATTCACCAACAGAGATGTTGTGGTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTTGACACTGTTATTCAGAGAAAGAAAAGCCTCCTTGTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCGTGTATTTGTACCCAGAAGTGCCACAAGTTATCTTCTCAGAATGGAATCTGCTTTTGTGATCTTATTTTGAGGGGATAGACTGTAATGGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTTTAAATAGAGGCCTCTAGTTTTTTTTTGTTTTGTTTTGTTGTTTTTTTAAATGGGGTCTTGCTCTATGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCACCCAGGCCTGTCTAATTTTTTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGGCTGATCTTGAACTCCGGTCAAAGTAGTCACACTCCCACCCATCCTAAAGCACTGGGATTACAGGCAGGGAGCCTTATGCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAGCGTTTGCATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTTTAACATTCAATATGCTTAATTTCTTTTTCTTTTTTTTTTTTTTTTAATAGTGACAGAGGTCTCTTTTCTCTGTTGCCAGGCAGTCCTATGAACTCCTGACCCAAAGCCTTGGGATTACACAGACACTGGTGTCTATGCCTGGCTGATTTCTTTATAAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAGAAACGAAGTGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTTAGCCTTAGAGAGGGCTGTCCAACTTGATCTTTGGTAGAAGAGTATCCACTGCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGTCCAGATGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTATTATGTTTTTTCTTCTTTACTTACAGTGTTTTGGTTTCGTTTCAGCAGCTCCCACACATGTGTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCCTTGTTTAGTAAGTAACCACAGCTGAAAATCTTAAAGATCAGGTATATATGAAGTAATTTCAGTTTGATTAGATCATCTCTTATCTTGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAAGTCTCCTTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTAATAGAAAGGTATGACACATACACATTACATGCAGAATATGATAGAAGTGATTGTCTGGATGCAAAATATTGACTGTGTGTCCAATACAGCTTCATGAGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGGTATTCTAGGAAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAAATAGTCTAGTTTTAGTGGGGTTATAAAGTATGACGGGAGAAAAAAGAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAGAAAACTATACTAGAGCACTTCATTTAATTTCTTAGGGAGTGGATGGAAGTCAAGTAAAGACTTTAGGTAACAAATATGCCTGTGGACCTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAGGAACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGGAAACTTATAATCCCAGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAAAAATCGTCAGATCAGATGTAGACTCCCACTATCACAAGAACAGCAAGCATGGGGAGCCACCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACACACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTCACATTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTTCCAGCTTAATTAGCCCAAAATCCAAGTCCAAAGTACTCATCTGAGGGATAAAGGCCAAAGATCCCTTCCATCTATGAGACTATAAAATCAAAGGAAGTAAATTAGATTGCTTTCTAAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAGGGGCTGTAGGCCCCAGAAAGTCCTGACCAGCTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGGCTCCATGCCTCACATCCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCTTACTCTCTGCTGTTTTCACAGGCTGGCGTTGAGCCTCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCCTGCCATTCTGGGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTGAGCGGTGCCCCAGTGGGGACTGTAGGGGGTCCAACTACCCCACATTCCCCTTCTGTACTGCCCTAGTAAGGGTTCTCCACTGGGGCCTGCACCTACAGCCAGCTTCTGCCTGGACATCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAACGTTAATTCTTGATTGCTGTGCACCAGGCCCCACATATAAGCCGCCAAGGCTTAGAACTTACACTCTCTAGGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCCAAGCAGCAGGCCCTGGCCTAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATGGGCTGCCACGTGAAGACTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGGATTTCTACTCCCAGAAATGGGTTTTTTTTTCTTTCTACCTCATGGTCCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGGATATGCTTTCAGAATCAGCCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGATACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAACCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTAGCCCTCCATCCTGTTCCAACACTACACCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTGGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCACAGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAGAACAAAATTGGCAGAGTCCTTTTTTATAATAAACCATTCTCAATAACCCTCCTTGGTAACAATATTGAATTCATTCATGAGGAATGAGCCCTTAACCAGAGCAATCATCTTTTGGCTAAGCTTCTCTTCCAATACTGCCACACTACAAGTTAAAGTTTCCCAACACATGAACTTTGGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTTGTTTTGTTTTTTTTGTTTTTTCAGAGTTCTAGATAAAGCAAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTATATAGTTTCTTAGATTACAAATTGGTAAGAAATAATGTGATACACTTTCTCCCACCTTAATCAATGGATTGTGAGGGTGTAAGTTTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTTTTCATAGTAAAATCAGTTGGTGATTTGATAGCATTTATTCTTCAATTATTTTAGCTTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAAAGTTTTAGATGTTGCTAAAATAAATGTGAAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCACCAAAGTACGTAAGTCCTCACTTAACATCTCAGTAGATTCTTGGGAGTACAGCTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTAATTCTACTGTGAATGTCATGGCCCAATAAGAAAAGGACAGGGGCGGACTTACTAGGCATTTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGCTAATAGTTTGAATAGGAAAATTGGTGAGGAAATAGCTGTAGTTGTTTCCAGGTGAGCTCACTTATTCACCCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGAACATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGGAAGCATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTAACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTAACTGGCCATTTCTGCCTTTCAAAAAAATTAAATACATTACTCAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTTGCCCAAAGGGCTTTGACTCCACAAGTTTACTTTTTTTAGTAATAGTTGAGGGACGAGGAGAGGTATAGAGAGGACACAGGATAATAAGTGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTGCAAGGACTCAAGATCTATCTTCTTTTAGTGGAATGTCTACTCATTTCAGCTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCATACTCATCCTATTTTCCTGTTGCTTTGCTCTAGAACTCTGCATCTGTTATCCAGGAGTGCGTGTCTTCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCAGCCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTGACATTTCTGCAAACATGCTTGATTTTTTTAAATGTATTTCATTTGCAAGAAATCTGGCAAAAGCATTTCTCATTTTTTTTTATGTAAGTATTTTATCTGATAAAGGGGAAGTTTAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCGGACGATGAATAGACAAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAAATTAACCAGCAATACGTA -2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.175321, "nevent" : 12397, "sequence_length" : 4584, "events_per_base" : 2.704407 } - 4/19 Test #8: test_event_table ................. Passed 0.30 sec -test 10 - Start 10: test_seqmappy + 4/19 Test #8: test_event_table ................. Passed 0.23 sec +test 9 + Start 9: test_mappy -10: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" -10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 -10: Test timeout computed to be: 10000000 +9: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "mappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" +9: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 +9: Test timeout computed to be: 10000000 9: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa (score = nan) 9: idx signal pos base current sd dwell 9: 0 182.803436 0 C 0.041604 0.315691 0.652851 @@ -118002,6 +118032,8 @@ 9: 2893 0.849858 0 C 0.041604 0.315691 0.652851 9: 2894 0.377715 0 C 0.041604 0.315691 0.652851 9: 2895 0.768919 0 C 0.041604 0.315691 0.652851 +5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } 9: 2896 0.404694 0 C 0.041604 0.315691 0.652851 9: 2897 0.580062 0 C 0.041604 0.315691 0.652851 9: 2898 0.647511 0 C 0.041604 0.315691 0.652851 @@ -120882,6 +120914,14 @@ 9: 5773 -1.929044 0 C 0.041604 0.315691 0.652851 9: 5774 -2.171860 0 C 0.041604 0.315691 0.652851 9: 5775 -1.821125 0 C 0.041604 0.315691 0.652851 +5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG + 5/19 Test #5: test_rawrgrgr_r941_call .......... Passed 13.79 sec +test 10 + Start 10: test_seqmappy + +10: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse3/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" +10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 +10: Test timeout computed to be: 10000000 9: 5776 -2.009983 0 C 0.041604 0.315691 0.652851 9: 5777 -1.848105 0 C 0.041604 0.315691 0.652851 9: 5778 -1.996493 0 C 0.041604 0.315691 0.652851 @@ -179501,7 +179541,7 @@ 9: 64392 59.267578 0 C 0.041604 0.315691 0.652851 9: 64393 58.711945 0 C 0.041604 0.315691 0.652851 9: 64394 57.415466 0 C 0.041604 0.315691 0.652851 - 5/19 Test #9: test_mappy ....................... Passed 0.69 sec + 6/19 Test #9: test_mappy ....................... Passed 0.51 sec test 11 Start 11: test_squiggle_r94 @@ -184647,7 +184687,7 @@ 11: 603 G -0.348534 0.163240 9.530728 11: 604 C 0.161046 0.266937 15.063374 11: 605 T 0.194787 0.502125 16.019983 - 6/19 Test #11: test_squiggle_r94 ................ Passed 0.27 sec + 7/19 Test #11: test_squiggle_r94 ................ Passed 0.21 sec test 12 Start 12: test_squiggle_r10 @@ -189793,7 +189833,7 @@ 12: 603 G -0.572062 0.335164 12.230327 12: 604 C 0.561030 0.467363 9.792212 12: 605 T -0.235200 0.581865 6.671800 - 7/19 Test #12: test_squiggle_r10 ................ Passed 0.16 sec + 8/19 Test #12: test_squiggle_r10 ................ Passed 0.18 sec test 13 Start 13: test_licence @@ -189811,7 +189851,7 @@ 13: The vectorised math functions 'src/sse_mathfun.h' are from 13: http://gruntthepeon.free.fr/ssemath/ and the original version of this file is 13: under the 'zlib' licence. See the top of 'src/sse_mathfun.h' for details. - 8/19 Test #13: test_licence ..................... Passed 0.02 sec + 9/19 Test #13: test_licence ..................... Passed 0.02 sec test 14 Start 14: test_help @@ -189842,7 +189882,7 @@ 14: such, may change drastically between releases and breaks backwards 14: compatibility. Newer versions may drop support of current features or change their 14: behaviour. - 9/19 Test #14: test_help ........................ Passed 0.03 sec +10/19 Test #14: test_help ........................ Passed 0.03 sec test 15 Start 15: test_help_events @@ -189883,7 +189923,7 @@ 15: for any corresponding short options. 15: 15: Report bugs to . -10/19 Test #15: test_help_events ................. Passed 0.02 sec +11/19 Test #15: test_help_events ................. Passed 0.01 sec test 16 Start 16: test_help_event_table @@ -189907,7 +189947,7 @@ 16: for any corresponding short options. 16: 16: Report bugs to . -11/19 Test #16: test_help_event_table ............ Passed 0.02 sec +12/19 Test #16: test_help_event_table ............ Passed 0.01 sec test 17 Start 17: test_help_raw @@ -189951,7 +189991,7 @@ 17: for any corresponding short options. 17: 17: Report bugs to . -12/19 Test #17: test_help_raw .................... Passed 0.05 sec +13/19 Test #17: test_help_raw .................... Passed 0.02 sec test 18 Start 18: test_help_squiggle @@ -189976,7 +190016,7 @@ 18: for any corresponding short options. 18: 18: Report bugs to . -13/19 Test #18: test_help_squiggle ............... Passed 0.03 sec +14/19 Test #18: test_help_squiggle ............... Passed 0.02 sec test 19 Start 19: test_version @@ -189984,21 +190024,11 @@ 19: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse3 19: Test timeout computed to be: 10000000 19: scrappie 1.4.0- -14/19 Test #19: test_version ..................... Passed 0.03 sec -6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 -4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } -4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG -15/19 Test #4: test_rawrgrgr_r94_call ........... Passed 19.97 sec +15/19 Test #19: test_version ..................... Passed 0.01 sec 2: ATTTTTTTAACAATTGGAAATTCAGTTTTTTGTATTTAACGAATTTTTTTATTTTCTAACTGTGAAAATATATTGGACGGTCGTTTTGTATATTTGGCATATTATTTGTAATATTTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTGTATATTAATCATGCGATTATGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTGCTTTATTGTCCTGGCTGAATATTCTTTACTGTTGGATGGAAGGATGTTAATGACATCAAATATCTTGTTAAGATCTCAATTGCAAGATTTTATATTGTATTATTTTTTTAGTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTCTTTACTGGTGATTTGACATTTTGTACCTGTCACCTGAGCAGTATTATCAGTGGTAGTCTTTTATCATATCATCTCTTGTTCCCCAAATTATCAAGTCCGTGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGATGATGTTTGGTTTTCATTCTAGAGTTACTTCATGATAATGATCTCCAAATTCCATTCAAATTTGCTGAAAATGCATTATTTCGTTCCTTTTGTGGCTGGTAATATTCCATAGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGAGCTGGTTTTCATATTTTTTCAGGTACAGAATTGCTGCTATAAACATTTATTTTCATTACGTAATCTATTTCGTATAATGACTATTCTGGGCCAAAGGTAGGTCTAAAAGATCTGCTTTTAGTTCTTTAAGATCTCCACACCTTTACATTAATGGTTATACTAGTTTACATTCCCATCAATATTCTTAAATTGTTTCCTTTTCACCAATCACCAACATCTATTGTTTTGATTTTTTTATTAGGGGCCGTTCTTTCAGGGTGAGTGGTATCCCACTGTGGTTTTTTGATTTACATTTCCCTGATCATTAGTGATGTTGGGCATTTTAATACAGGCCATTTATATCTTCTTTGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTCTCCATCTCTGTCAGGTTGTCGTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTTCTTGGTCGCGAAGTCTTTTGCCTAATAACCCAATGTCTCTAGAAGGTTTTCAACGTTATCTTCTAGAATTTTTTTATAGGGTTTCATCTTAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTTGTATAAGGTGAGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCAGGTTACCAATTCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTGTTGAGGATCAGTTGGCTGTAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATGCCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAATGTGATGCCTCCAATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGAATGATGGTGGTATTTTTTGATGAGGAATTGCATTAGTTGTAGGTACTTTTGGCAGTATGGTCATTTTCACAATATTGATTTACTCATCCATGAGATAGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTGCAGCTAATGTAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCGCCTTATACTTGAGGCTACTGATTTGTGTACATTAATTTTGTATCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTGGGTTTTCTAGGTATACGATCATATCATCCTTAAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCGCACGGGAAATGCTTTCTTTTCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTATCACAGGTGGTTTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGATGCTGGATTTTTTGTCAAATATTTTTTTTCTGTGTTTGTGAGATGATCATGTGATTCTTGTTTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGATTTTTTGCATCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTTGTTATATGTCCTTTCCTGGTTTTGATATTACAGTGATACTGCTTCATTGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAGCTAGGATTGGTACCAATTTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCACAAACTATTTTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGGTTGTATCTTTCCAGGAATTTATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTGAGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTTGTTTTATCTTTTGTATGTTTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTTTCTGCTGGGTTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATTTATGTAGGTAATGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCACAGAAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTAGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCAGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAATTTTTTTACATTTCTATCCTGATTTCATTGATGCCCAATGATTTTCTAGGAAGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTTGGGGTTGATTTCCAATCTTAATTCCTGTAGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCTGTATATATTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTGCATTTGTTGAATCTTCTCCACATATCCTGTAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCATTGGGTACTGAAGTCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTCCTGGATTCGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTTTACCGGCTGTTGCTTTAAGTTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTAGTGTCCATTTGCATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTAGTGAGTCTAGTAGAGACAGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTTAAGTGGAGCATTTAGGCCATTTACATTCAGTGTTAGTATTGAGATGAGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTTTTTTTAAATCATTGCATTATTGTTTTATAAGATCCTGTGAGAGGTTAAACGCAAAACAGACGCCGAAGACT 2: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.459646, "nevent" : 5787, "sequence_length" : 1694, "events_per_base" : 3.416175 } 2: CTCAGTGCATTAACCAACCTACCTTCAATGCTCCACCATCCAGCCTCGGTAATAATTACGCGCCCCTTCCCTTGAATCACCTTCACTAAAAGCCATGTTGAATCCCACAATGTAGGCCATCAGCTCAGGAAATAGAACATCAGCATGGGAGGTAGTAAGGCAGATGAAAAAATCATGCCTCTCATCAGTGCCAGTAGAATGACTCATTTCTCAATACCTAAAATAAAGAAATCGATGATTTACATGAGATCAGAATGGGCCGTAACAAACAGGTGCTCTGACAGGTGCCCAATCGATAGAGAACAAAGCAGGGAATAATGACTGGTTGACCAGAGCCAATCCTTCCATTCAACCCTACACTATTCCAATGATATTGTCACATATCACTTGTGTGCCATCAATATATTCAACACTTCTCCAATCCATATGGCCAACCAGATCAAAGGTGGCATCACAAGCCAAGGCCGGTGTCAGGAATTTCAGACCAAATATCATGCCTTCATTCAGTAGGTAGCGTATCTGCCGCTGTAAAATCAGACAAAGCCAGATCCGCCATAATGCTTCCTTCCACTCGGCCTCACTTCTCATCATTAAACCTCAGGCATGCCGAAATGGAACATGGAGCCCTAAAATGAATAGCCTCATCAGTGGGTAATCCCACTGTCATCTAATCAAAGGCCCCATACATTCATCAGAATAGAAATGGTGGTGGCATGGAACCCTTCTGAACAACATCTCAAATGCAGTGCTTCAATGAAGTAAACCTGCTCATAGGAGGCAGCTAAGCTAAAATCAGGAAAATTGCATGGTTACAAGCCCGCCGAAATGAATACAAAGCGCAAACCACTACCAGCCCCAGAATAATCAATAAATATACATAGCCAGAATCGAATAAGTCAGTATGACGCCGCGCTTCAATAGTAGCAATCAGATCAGCATTATTTATCCTTCAATCCAATAGGAAATTCCTTCAAATGCTAGACGGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAATGAGCTCAATCTCCATATTAATGCTTCATTGCCATCTCCACTATCATCCTTATTATTCTCAATAAAACCATAAACAAGTGAGGCCCATCCATAAATAAATGCAGCCATCCAGATAGCCTCAAAATAAGGCTGAGTATCATTCATTCACCCCTTGCCAATATTCTCATCCTTCCCTTCTCCATCCCAGCCATGCCATCTTAACATCGCTCAGCATTTTGATAGCGTAAATAGATAGGTCAATTTCAGAGCAGTCAAAATAAATAGGCTGGAAATCAAATGTGAGGCAGATGCCAGTGGAATGGTGGGCGCTCCATTGACACCACTTCCTCCAGCTCAATTTTCTCGATAAAAGAAATCGATCTGAACAATTTTGTTGCCCGTCGCTTATTCCAAATAGTGGCGCTGACTAAACACCGCTCAATGAATCATCATCAACCTTCTACTCGTACCAGATGCCTCATCAGCCAAAATCAAATATCCTTCAATAAGTGGGCAGTATGAATGGTGGGCCAATGGTACTATCAGCCAGAATGTTCTTCGAAAATAGTGACCTAAATGGAAAATTTGGCCTCGTACCAGTAAATAAATTCTGACGAGCATCAGTGAAAAAAACATGTAGACGGATGGGTCGGCTGCCTCCAGCATTTCCATCTCATGAAGCGGGCGCATGAAA -16/19 Test #2: test_events_call ................. Passed 20.62 sec -6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } -6: TCTGGTTTTTTATTATGTTTTATCTTCCATA -6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } -6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA -17/19 Test #6: test_rawrgrgr_r10_call ........... Passed 21.56 sec +16/19 Test #2: test_events_call ................. Passed 16.27 sec 10: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa -- score 11581.230469 over 12818 blocks (0.903513 per block) 10: block pos 10: 0 -1 @@ -202819,24 +202849,30 @@ 10: 12815 -1 10: 12816 -1 10: 12817 -1 -18/19 Test #10: test_seqmappy .................... Passed 4.70 sec +17/19 Test #10: test_seqmappy .................... Passed 5.65 sec +6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 +6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } +6: TCTGGTTTTTTATTATGTTTTATCTTCCATA +6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } +6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA +18/19 Test #6: test_rawrgrgr_r10_call ........... Passed 17.51 sec 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.020645, "nblock" : 80790, "sequence_length" : 9342, "blocks_per_base" : 8.648041, "nsample" : 81106, "trim" : [ 200, 80990 ] } 7: CAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTAACCTGTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGGCTGAGGCAGGAGAATCCTTAAGCCAGGGCAGAGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAGAAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAAGAAATGTAGGCTATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTGGTGAGTATCTAATGAAAGCGTTCATTTAAGAATGTACAAGAAGCTATTTGTAGTAACTAGACCAGAGAAGACCTTGACAATATTTACTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGAAATAAATGCTATGCAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTAACAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTATTTCGCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGAAATCACTGCTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAGCCATATAATTACATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAAGTGTGTTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTTCACTTTTCATACAACTTTCTCACAAAGTTGATAAGTGTTTATTTTCTATTTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGGAAGTATCATTTCAGCTTTCCATCCATTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAGAAACGTTGTTGAAAACTTGAGGTAAGAATAAAATATTAAATATTTCTTTCTTTTAGTGTGTGTAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGTCTGCTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTACAATGCAATCATCAATAAGCTTAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCTAGCCATTGCTGCTTTAAGTTTTTCATTCTATTGTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCACTTGGCAGCTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTGAGTGCTTTCTCCATCTGCAAAGTTGGCTCATGGTGCTCTGCAATTACATAGTGCGTAGTAAGCACTCAATGTAGCTGCTGTATTGATGAGTATTGCCATACTCACGCTCATATCTAAACCAGAGATGGCAGTCTTTCTTTAAGGGCCGGATAACGAACATTTTGTGCTTGTGGACCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAGAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAGCAACAGTATGTGCAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGGGGATGCGTTTAGGATAGCATACTGAACTAGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTGTACTCACTCTTCCTGTTGCTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTTATACTCTACAAGGTCTTTCCTGATCCTCTGAGCTGTATCAGATGCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAATTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTAGATTTCAATTTATTAAGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTAAAAACACATATGCCTGGGCCTATATGCTGGACTTCAGAGATCTGAGTGTACAAGGTCTTGGTCAGGCATTTGCATTTAGAACCCCCTGAATGAAGTGCCCCAAAATATATGTTGAATAAAGCAATAAAACCCAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTATCACACTGTAGTTTCTGCATTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGACTCAGACGAGGCACTTAGAATATGCTTTGGCTTTAAAAGTCATGGATGGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAGAAAGAAAAAGCCTCCTTATTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTATTATTTGTACCAGAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTAAATAGAGGGCCTAGTTTTTGTTTTGTTTTGTTTTTAAATGGGGTCTTGCTCTGTGTGCCCAGGTTGGAGTGCAGTGTTATGGTCACTTAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTGTAGATGTGCACCACTTAGGCTAATGTCTAATTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGACTGATCTTGTGAACTCCAGGTCAAATAGTCCACACTCCCACCCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCCTTATGCCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTGACTTAGTAAACGTTTAATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAATATGCTTGATTTCTTTTCTTTTTTTAATAGTGACAGAGGTCTCTTGCTATACCTGTTGCCCAGGCTGGTCTAGAACTCCTGACCCAAAGCGGGATTACAGACATGATGATCCACCATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCCTCCAGGCCTGGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGGTTAGCCTTAGAGAGGGCTGTCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCCGTGGCTTCTCCATCCAGAGACAAATAAGAGAGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGATTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTAGTATGTTTTCTTCTTTACTTACAGTGTTTTGGTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTAAATAACCTGTGAAGCATTTAATGACTTTGTTCCTTGTTTAAACAAGTAAAAACCACAGCTAGTAATCTTAAAGATCGGAGCTGTATATATGTAAATATTCCGTTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGAAGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCCAATACAGCTTCATGAATTATTAGCATTGCGAGACAGACCTAAATGAATCAGGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAGAAAACTATACTGGAAGCACTTCATTTAATTTCTTAGGAGTGGATAGGAGATAAGTAAGACTTTAGAGTAACAAATATGCCTGTGGACACTCTGAAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAAGAACTGGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGTAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTAAGCATGGGAACCACCCCAAGATTCATTTGCCACCTCCCACCTGGTCTCTCCCTTACCCGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACCACACACCATTCCACTTGGCCTCTCCCAAATCTCATGTCGGTTTACTCACATTCCCAAAGTCAACTGTGGCTTCCCAATGGTCCCCAAAGTCTTGCTCATTCCAGCTTAATTAGCCCAGAAGTCCAAGTCCAAAGTACTCATCTGAGATAAGGCCAAAGTCCCTTCCATCTATGAGCCTATAAAATCAAAGAAGTAAGTTAGATTACTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCAAACAAAGGGGCTGTAGGCCCCAGAAAGTCTGCAATCAATAAGGCAGTCATTAAGCTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACATCCAGCCCACTGATGCAGAGTGGGCTCCCACAGCCTCATGCAGCTCGACCTCTGTGGCTCCATGCCTCACATCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTAACCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCACCATTCTGGGGGTCTGGAGGATGGTGGCCCTCTTCTCATGGCTCCCACTAGGCGGTGCCCCGAGTGGGGACTGTAGGGGTCCAACTGCCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCGCAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTTGCTGCAATGCTGTTACATGTAAGCCGCCAAGGCTTGGGGCTTGCACTCTCCTGGAAGCCCTGGGCTATACGCTGGCCCCTTACAGCCATGAGTGGGGATGCCAGGACGCAAGTTCCCGAGACTGCCAAAGCAGCAAGGCCCTGGCCACAAAACCATTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACCTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAATGGGTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTAAATGCTGGTTCAGTTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGCAGAGGCAAGAATGTACCCTTCTCTTTGCTAGAGCATAAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAATTTGCAAGCTTTCCACTTCTTCTGTCTTCTGAGCCTCCATCCTGTTCCAACACTGCCTATTACTCCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAAGACATTTATTTCTCACAGTTGGCTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCTGGCAAGGGCTTTCTTGCTGCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAAACAGAATTGGCAGAATCCTTTTATAATAAAGCCATTCTCAATAACCCACTCCCTTGGTAACAATATTGAATTATTCATTCATGAGGACAGAGCCCTTATATGGCTTAATCATCTTTTAATGCAACCTACTCTTCCAATACTGCCACACTACAGGATTAAGTTTCCAACACATGAACTTTGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAATTGGTAAGAAATAATGTGGTACTTTCTCCCACAACTTAATCAATGGATTGTAGGTGTAAAGTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCGAGTAAGCTCAGTGTTTTCATAGTAAAATCAGTTGGTGATTTGTTAGCATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCACATTTCCATCTTCTGGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACGTAGTCCTCACTTAACATCTCAGTAGATTCTTGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATGTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTGTTCACTGTGAATGTCATGGCCCAATAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATATTATCACCAGATGGGAAACAGGGTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAATATATTCACCGTATTCATAAAGGAATAAAAGATTTAGTTTAGACAAAACAATGCTATTCAATATATTCAGTTAATGTGGTATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAGAATTACTGTGGTGCTTAAAGGCTTTGACTCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGGAAGAGGTATAGAGAGGACAGGATAATAAGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGATGTCTACTCATTTCCCCTGTTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCATACTCATCACTATTTCCTGTTGCTGCTCTAGAGACTCTGCATCTGGTATCCAGGAGTTGGTATTGTCTTCATCTTGCCTTTTCAGTGTAAATCACCCTGTTTTTCCTCCTTATGCCCAGTAATAGGTGATCGTACATCCCTTCACAACAATTAGGACTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAGCTGAACTGGAAAGAGAATTGCTTTTGACATTTCTGCAAACATGTGATTCTTTTTAAATGTATTTCATTTGCAAGAGGAAATCTGGCAAAAGCATTTCTCATTTTTATGTAAGTGTTTATCTGATAAAGGGGAAGTTTAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCGGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCACCAGCAAATTGACCAGCAATACGTGATA 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.012573, "nblock" : 64090, "sequence_length" : 4696, "blocks_per_base" : 13.647785, "nsample" : 64395, "trim" : [ 200, 64290 ] } 7: GGTATTGCTTCGTTCAGTTACGTGTTGCTCTTGCCTACATCGCTCTATCTTCAGCGTCTGCTTGGTGACATACCCATGAAACTATAATTTTTTAACAATTGGAAATTCTTCAGTTTTTATGTACAACAATTTTATTTTCTAACTGTGAAAATATATGGACATCTGATTAGTTTTGTATATATTTGGCATATTGTTTAGCAATATTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCGTATGTAATCATGCGGTGTGAATAATGACGGTTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTTGCTTTATTGTCCCTGCTTGGCTAGATATTCTTACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTAATTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTTCTTTACTGGTGATTTTGACATTTTGTTGTCTCATCACCTGAGCAGTATTGCACTGTATCCAGTGTTGGCAGTCTTTTATCCCTTATCCTCCTCTGTTCCCCCAGAACCCTCAAGTCCGTTAACATCATTTATGCCTTTGCATCTCATAATTATACTGATGAAGAGATGATGTTTGGACCATTCCTGGAGGTTACTTCACTTAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTCTTTATTCACTCTTTGATTGATGGGCATTTGGGCTGGTTTCATATTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTACCTAGCATATACGATACGTATCTATTTCGTATAATGACTTCTTCTGGGCCAAAGGAGTAGGTCTAAGATCTACTTTTAGTTCTTTAAGGAATCTCCACACCATTTCACATTGTGGTTATACTAGTTTACATTCCCATCAAACATTCTTAAATTGTTTCCTTTTCACCAGTCACACCAACATCTATTAGTTTTGATTTTATTAGGGGCCATTCTTTCAGGAGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATAGTACAGGCCATTTGTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAGGTTTTCTCCATCATGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCTAAGCTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCGAAGTCTTTGCCTAACCCAATGTCTAGAGGTTTTTCAACGTTATCTTCTAGAATTTTTATAGGGTTCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTCAGGGATCAGTTTCATTCTTCGACATGCTTGGGTTTACCGAATTATTCAGTGTCATTTGTTGATAGGATATCCTTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCAGTTAACATAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGGTATAGTTTGAAGTCAAGTAATGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGGGAATTGCATTGGAATTTGTGGGTGCTTTTGGCAGTATGGTCATTTTCACAATATTGATTTTACTCATCCATGAGAATGGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAATATATATATATATATATTTGCAGCTATTAATAAAGGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGTATACTTAGGGCTACTGATTTGTGTACATTAATTTGTAATCCTGAAACTTTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTAGGGTTTCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCCTGGCTAGGACTTCAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCCTTGTCTTTGTTCGATCGCACGGGAAGTAACAACTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTGTCACAGGTGGTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGGACTTTAATCATAAAGGGATGCTGGATTTTTGTCAAATATTTTTCTGTGTTTATTGGGATGATCATGTGGTTCTTGTTTTTAATTCTGTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGAGTTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTGTTATGTGTCCTTTCCTGGTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAGATTCAGCTGTGAATCCGTCTGGTCCTGGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTAGGCTTATTTGGATCTTCTCTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAATAACCAGCTTTTTGTTTTATCTTGTATGTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTCTTTTTCTGCTGGGTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGTGTGACCTTAGATTGTCTATTTGTGCTTTTCAGACTTTAGATGTAGGTATTTAATGTTATCAGTTTCTATGTAGGTATAATGCTATGGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCGGTTTTGATAGGTTGTGTCACTACTATTGTTCAGTTGAAAGAATTTTTACATTTCTATCCTGATTTCATTGTTCACCCAATGATTTTTCAGGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTGAAGATTTCTTTTTGGGGGTTGATTTCCAATCTTATTCCCTATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTATATGTTCTATATTGGAGAATGTTCCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTAGGTGAATGTTCTCCACATATCACTGTAAATCCGTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTAGGGCTCCAGTATTAGGCACTTACATGTTTAGGATTGTGATATTTTCCTAGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTGTGTCCATTTATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTGGAGGCTGAGTCTAGTGAGACGGTAGATACTTGGTTAGTGGTATCCATTCTGCCATTCTGTATCTTTTAAATTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTAAATCATTGCATTATTGTTTATAAGATCCTGTGAGAGGTTAAACGCAAGCAGACGCCGAAGATG 7: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.041418, "nblock" : 28890, "sequence_length" : 2268, "blocks_per_base" : 12.738095, "nsample" : 29150, "trim" : [ 200, 29090 ] } 7: CGGTGCGCATTCAGCCAGCCCTACCTCATTCACCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTACGCCCTTCCGCCGAATCGCCTTCACAAAGCCTTGTTAGTCCCACATGGCCAGTGGCCGGATTGTCGGCTCCGTTTCGGAATGGACGTGGATCTAGTGTGATTGTTGGGAGCGGATGGAAAATCAGCGTGCCTCTCCACCAATCGATCATCGGGTGGTGCGGTGGATGATCGTTACTCGCCAATACAGATGAGAATCCGTTGATTTTGCAGCTCGATTGGGATCGGATGGTGCATTAATAGACCGGGTATCTGAACGGTGATGAATGGGAGAGACAGTGGAACCGGCATTAGGCGGGATAATGGGCGGTTGGAAGAAATGGAATGATACGGCTCATTCAATTTCACTTCATTCACCGTCATGATGAATGGTGTCGCATATCGCTTTGATGGCATCAGTATAATTCCGCCTTCTACCGATATCGAATCCAATAATTAGTAGGTGACTCAGCTGGATCAGGATTTGACGTCGCGGGTGGATGGGATGGGGTTTCGGATATTTGGAATGTCATTAGCCACCTCGGCTGCAGTGTCGTTTCGGTGATGGTGGTGGGGGGTGTGAAATCACCTTCGTCTCGTTGCGCCGGGAGAGGCGTTCAGATGGGGGTGGAAACGGGATCTGGGTATCGGACGAAAGGAGTGGATCAGCATGCATCGATTAGGCTGCATTTCCGCTCGACATGAAACGGATGACTAGCGTAGATCATTGGTGATGGGTGTGGGAGGGTGACATCAGATGGACTTGTAGTCTGGGATTTGGGTCCTAAAGTGGGATGACATACTCTGCATATCGTCGGTGGATCCGCTTGTGCGTGTCTGCTGTCAGAGATTTCGTGCGTTCAATGCGGTAATGGATGGATAAATGGTGGATGGTGGTTCGTTGGCGTGGAGCGGGACCTTTCACTGGGATGATACCTCCGGTGCGGTTGAACCTCGGTGGGTGCGATTCTGCGGTGGATTCTCTCGTCGTGCGGGTAATAATGATTTCGACTGGAATCGGAGGTGTGGAGTGGGTTTTGGTGCCGGATGGGTGGAATTCTCTCGTTGGCGTAGATGAGTGCGCTCTGCCGGTTTGGATGGTCATTGGAAATGTGCATGATGGGGATCAGGATGGATGGTCGGTGTGGGCCCTGTGCTTCATGAGTCGGTGGAAGACGATCGGATCAATTGTTGTCATTTCAGTCAAATGGAATAATTTGAGAATTTAAATTCCCAATTGAATTAGCCTGGATGGACAGGTAGAAAGCCTATGAAAAGCCCATGAAGTGGATGACTGGATCAGTCCTACCAGAATCGTATTAGTATTTCATTATGTCCTTCCACTAATAGATATTATTGATTATCTCCGATAAAATATATGAATGGGTGTGGATTTGTCATAAATCATTGTATCCGTTATTATAAGGAAATCGTTTGGTTGAGGGTGTCGTTGGCTCACTTGTACTTAGTATTCGTATATTAGTCATTTCCCTTTATCATCCCCAGTGTATACAATCTTAGCATCATCGTAATTTCGTTCATTCACCCACATTTTTGATGGCGTAAATCTCATAGAATAGATGGGTTGGGATTTCAGATGTCTGCATGGCCCGGTCAGTATGATGAACGGAGTATCAGATCATGAATCGGATGGTGGATGGGTCGGCCGATTAGATGGTTGTATTATCTCCCAAGAATGGACGTGGAGTGACAAATGGTAAGATGCAAGATGGATTGATACCAGCTTCATCAATCTAATTTTTATAGAATAAGAAAGTCGATCTGGGTGCCGACCGTGAACAGATTTGGAACGCTTGTCAGCCTTACTTATTCTCCAGATAGTGTATAGGTGAATGGTACAGGATAGAATATATGTGCCAGCTCAATCAGATCGTAAATCGTTATTCTTCAAATATAGTCTTAGTCATATTTACTCATCTGACCGAAATCAGATATCTTCAATATAGCGGCAAGTGGATAATGACAGTGTAGATGGTGGATGATAATGGAATGTTACTATCAATGGCGAATGAACCTTTCGAGAAATGGTAGAGCTAGTAGGTGGGAGAATTTGGCCTCCGTACCAGATAAATTTCAAATAAATTCATCATGGGCGGCTGGTGAACGCATCAGTGGAAAAACATATGGATGGATGGGATCGTATCGATGGTGAGCTATCAGCGAATCAGTGGCATTTCCAATCTCATGGGCGGGTGAAGGT -19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 61.03 sec +19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 74.60 sec 100% tests passed, 0 tests failed out of 19 -Total Test time (real) = 70.33 sec +Total Test time (real) = 86.49 sec make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' - rm -fr -- /tmp/dh-xdg-rundir-yvp9STbr - cd build_sse2 && make -j6 test ARGS\+=--verbose ARGS\+=-j6 + rm -fr -- /tmp/dh-xdg-rundir-QWamZzzY + cd build_sse2 && make -j5 test ARGS\+=--verbose ARGS\+=-j5 make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j6 +/usr/bin/ctest --force-new-ctest-process --verbose -j5 UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_sse2/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_sse2/DartConfiguration.tcl Test project /build/reproducible-path/scrappie-1.4.2/build_sse2 @@ -202876,12 +202912,6 @@ 5: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "raw" "--model" "rgrgr_r941" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" 5: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 5: Test timeout computed to be: 10000000 -test 6 - Start 6: test_rawrgrgr_r10_call - -6: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -6: Test timeout computed to be: 10000000 1: 1: 1: CUnit - A unit testing framework for C - Version 2.1-3 @@ -203261,27 +203291,39 @@ 1: tests 71 71 71 0 0 1: asserts 506 506 506 0 n/a 1: -1: Elapsed time = 3.783 seconds - 1/19 Test #1: unittest ......................... Passed 4.98 sec -test 7 - Start 7: test_rawrnnrf_r94_call +1: Elapsed time = 4.458 seconds + 1/19 Test #1: unittest ......................... Passed 8.76 sec +test 6 + Start 6: test_rawrgrgr_r10_call -7: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -7: Test timeout computed to be: 10000000 -5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } +6: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +6: Test timeout computed to be: 10000000 4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.295786, "nblock" : 16158, "sequence_length" : 9512, "blocks_per_base" : 1.698696, "nsample" : 81106, "trim" : [ 200, 80990 ] } +5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } 2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.273149, "nevent" : 16119, "sequence_length" : 9414, "events_per_base" : 1.712237 } -5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC -5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } 3: GCAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTATGTCTTAACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCAACTACTCTCCGGGAGACTGAGGCAGGAGAATCCTTAAACCCGGGGCAGGGTTGAAGTGAGCCGAGGTCTCACCTCATTGCACTCCAGCCTATGGGTGACAGGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAAATCAGTTTCCCGTAATTATTTTAGAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTAGTAGGTATCTAATAGAAAGCGTTCATTTAAGGAATAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATGTATTCTGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTATAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTTTATTTCCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAAGAAGGTAATATAAAAATGGAGTATGAACAAAATTGAAATCCTTTGCTATGAAGTTGAAAATACTAGTTTGTACATGTAAGCCTGTACGATAATAAAAATATAAATATATAATTTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTAGTTGAATATTTCACTTTTCACGTACAACTTTCTCACAAAGTTGATAGTGTTTATTTCTATTTTTGTATGTGCAGCCTCATATTATTTGTCTTTTCTCGTTAGAGTATCATTTCAACTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAACACAAACGTTGTTGAAACTTGAGGTAGAATAAAATATTAAATATTTCTTTGCCTTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCTGGAAATGCAAAATTAGAACATGCCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTTTCCTCATCTTCCCTCATTTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTAGCAAGTTTTTCATTCATTGTTTTTTTTCCATGTATTTCTGTAAGCCTCTTGTTGCAATCTTCACCTTGGCGTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGGTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTTTTCTGCAGTACATAGTGCGTAATGGCCTCAATGGTAGCTACTGTATTGATGGAAGTATTGCCATACTCCCTTCATATCTAAACCAGAGATGGTGATCTTTCTTAAGGGCCGGATAACGAACATTTTTGTGCTTATGGACCACGTAGTTTCTGTCTCACCTGGCCCGGCTCTACTGTATTGTAGAAGCAGCCATGGGCGTCTCTATGTGAATGGGCGTGACTGTGTTTTCAAAAGCAACAGTATGTGCAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTGGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCGCTCTTCCTGTTGCTTTGGCAATGCTTATTTATTTTTGCCAGGTTTTCTTCCTTATACTCTACAAAGGTCTTTCTGATCCTCTGAGCTGTATCAGATGCCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTATGTTTCCCTGACTTTGGGTGTGAGTTCTTGAAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTATTAGGTTGTAGATTTCGAGCTTTTGATCTCAAAGATCAGCTGTGCATTTAAAAAACACATATGCCTGGGCCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCTAGATAAGAAGTGCCCCCAAAATATATATTGAATAAAAAGCAATAAAACAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTATTTACTAACTTCTGATACAGACTCAGACAGGCACTTAGAATAACTGCCTTTAAAAGTCATGGATGTTCAAATGCCGTAATGGAACACTATTCACCAACAGAGATGTTGTGGACTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAAAGTGAGTTAGCAAATGCTGTTAGAAACTGTCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACAGTTCCATTAGTATTTGTGCCAAGTGCCACAAGTTATCTTCCTCAAGAATGAATCTGCTTTTGTGATCTTATTTGAGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTAAGGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGCTTCTAGTTTTTTTGTTTGTTTGTTGTTTTTAAATGGGGTCTTGCTCTGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGGTCTCACTGTGTTTCCCAGGCTGATCTTGTGAACTCCGGTCCGTAGTCACGCCCACCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCTTATGCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTCTTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCTATACTGTTGCCCAGGCGGTCCTAGACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATCCTATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGACCATAGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTGTAGCCTTAGAGAGGGCTGTCCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTGAGGGCCACTGAGGGTCATGGTGGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGAGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTCTTCTTTACTTACAGTGTTTTTGGTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACGGCGTGAGGGCTGCTTTTGGAACAAATTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTGAAACATTTAATGACTTTGTTCTTGTTTAAATAAGTAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATTGTAAATATTTCATTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATATTCCTTATCAAGGAAGCTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATATGATAAGTGATTGTCACCAGATGCAAAATATTGACTGTGTGTCAATACAGCTTCATGAAATTATTAACATTGCCTTGAGACAGACCTAAATGAATCAAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCCAGATAGAGATTATATAGAAGTAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTAGAAACACTTCATTTTAATTTCTTAGGGAGTGGATAGGAAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAAGACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTTTGCAACATGGGAACCACCCCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGAACGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAATCTCATGTCGGTTCCCTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTCCAGCAATTAGCCCAAAGTCCAAGTCCAAAGTCTCATCTGAGATAAAGGCCAAGATCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAAGGGCTGTAGGCCCCAAAGTCTGCAATCCAACTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCGCATCCAGCCCACTGATGCAAGTGGGCTCCCCACAACCTCATGCGAAAAGCTCTCGACCTCTGGCTCCATGCCTCATCCAGCCCACTGATGCAAGAGTGGGCTCCAGCAATCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTACCTCTCTGCTGTTTTCACAGGCTGGCGTTGGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCTGCCATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCCACTAGGCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCATAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCAGGCATTTCTATACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTGCTGTGCACCACATGTAAGCCGCCAAGGCTTAGAACTTACACTCTCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCAAGCAGCAAGGCCCTGGCCCACAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATAGGCTGCCACGTGAAGACCTTGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAAATGGGTTTTTTCTTTCTACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGGAATCAGCCAGGTCACCTGTTGAGATGCTTTGCTGTAGAAATTTCTTCCACAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAACAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCAACCATCTAACAAGTCTCTAGGAAATTTGCAAACTTTCCACTTCTTCCTGTCTTCTAGGCCCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCGAACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGTGGAGGTTAGGAAGTCAAGGTTGAGGTCCCTACATCTAGCAAGGGCTTTCTTGCTGCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAAACAAGTGTAGAGATCCTTTTATAATAAAACCATTCTCAATAACCCCTCCTTAGTAACAATGAATTATTCATTCATGGGGATAGAGCCCTTATGTGAAGCAATCATCTTTTAATGCAGCTTCTCTTCCAATACTGCCACTACAGGATTAAGTTTCCAACATGAACTTTGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCGCCGTTACAAATTAGTGAAATAATGTAGTACTTTCTCCCACAACTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTATATTTGTTAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTCTCTGTAATTATAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACAGTAGTCCTCATAACATCTCAGTAGATTCTTGGAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTATTCTGTAGATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATTATCACCAGATGAGGAGAAACAGGGTTTTGCTTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCATATTCACCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGGTGCATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTGTAAAGTATTGACAGTAATATTATAATAAAATGTCATCACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTGCCCAAGGCTTTGACTCTAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGGTATAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCCGCGCCTCATCCTATTTTCCTGTTGCTTGCTCTAGAACTCACCATCTGGTATCCAGAGTTAGGTATTGTCTTCATATTGCCTTTTCAGTGTAGAATCACCCTGTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCGGCCATCCCTTCACAACAATTAGGACTTTCACCGTTTTTAGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAGTGCTGACATTTCTGCAAACATGTGATTTTTTAAATGTATTTCATTGCAAGAATCTGGCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGAAGTTTAAAATATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTAACCAGCAATACGTAGT 3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.319873, "nblock" : 12818, "sequence_length" : 4612, "blocks_per_base" : 2.779271, "nsample" : 64395, "trim" : [ 200, 64290 ] } 4: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCATGGTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGTATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTCACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCAAAATATATATTGAATAAAACAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTAATGTGTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAATGAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTGCAAGCATGGGGAACCACCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGGGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGTTCCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC 4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.179309, "nblock" : 12818, "sequence_length" : 4723, "blocks_per_base" : 2.713953, "nsample" : 64395, "trim" : [ 200, 64290 ] } +5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC +5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } 3: CTTCCGTTCGAGTTACGTGTTATCTTTGCCTGCAATCCATCTATCTTCGGCGTCTGCTTGGGTGACATACCCATGGAAACTATAATTTTTTTAACAATTGGAAATTCTTCAGTTTTTATATTTAACAGTTTTTGATTTTCTAACTGTGAAAATATATGGACCTGATTAGTTTTGTATATTTGCGCAATATTGGCTAACAATATTTTTCTGAATTTACTTACTAATTCTCCAGCATAGATTCTTATGGGACTGTCATATATTAATCATGCGATTATGAATATGTGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTGCTTTATTGTCCTGGCTGGAATATTTCGCACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTTAGTATTTCAACAGGTTTTTGGGAACTGGTGATGTTTGATTACATGGAATCACGGTTCTTTACTGGTGATTTGACATTTTGTTACCATCACCTGAACTTGGTATTATCCAGTGATTGTAGTCTTTTATCCATATCCTCCTCACCCGTTTCCCCAGTCCTCAAGTCCGTTAGCATCATTTGCCACCTTTTGCATCCTCATACTGATGAAGATGATGTTTGTTTCATTCCTGAGTTACTTCGCGAATGTGATCTCCATTCCATTCAAATTGCTGAAAATGCATTATTTCGTTCCTTTTTGTGGCTGGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTGATGGGCATTTGACTGGTTTTCATATTTTTTCCAATTGCAAATTGGTGCTGCTATAAACGCCATTTTGGCACTGTACATTACGTATCTATTTCGTATAATGGCTTCTTCTGGGCCAAGGTAGGTCTAAGATCTGCTTTTAGTTCTTTAAAGATCTCCTTTACGGCTAATGGTTATACTGGATTTACATTCCATCAACATTGTTAGGTGTTTTCCTTTTCACCAGTCACAACATCTGTGTTTTGATTTTTTTATTAGGGGCCATTCTTTCAGGGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTTTAATAGGTTTGAGGCCATTTATATCTTCTTTGAAATTGTCTATTCATGTCCTTAACTTTTTGATAGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAATTTTCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTAGTTGGGTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCAGAAGTCTTTTACTAACCCAATGTCGAGGTTTTTTTCAACGTTATCTTCTAGAATTTTTTTACCGGGTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTGGATCCAGTTTCATTCTTCGACATGGCAGGTTTGAGTGATGTCATTTGTTGGTCGGGTCCTTTCCCCACTTCATATTTTGTTTGTTTGTTGAGATCTTGAGATTGGCTGTACGTGTTTAGCTTTATCTCTTGGTTCTCTATTCTCTTCATTGGTCTTATGCCTGTTTTTTATACCAGTACCATGCTGTTTTTGCTGATGGTGGCCATTATAGTTTGAAGTCAAATGTAATTACCTCAATTTGTTCTTTACTTAATCTTTACTTTGGCTGGGGCCTCTTTTTGGTTCCATACCGATTTTAGGATTGTTTTTCTCATTCTGTAGAATATTAGGTAGTATTTTTGATGAGTGCATTAGATTTGTAGGTACTTTTGGCGTATATGGTCATTTCTATGTGATTTACTCATCATGAGAATGGATGTATTTCCATTTGTTGTGTATGATTTCTTTTTTTCAGCAGTGTTTTGTTGTTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAGTATAGTCAAATATATATATATATATATATATTTACGCTAATATAAAGTTGGGGATTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGGCTATAGCGGGCTACTGATTTGTGTACATTAATTTTGTATCTAGGCTTTGCTGGAATTCATTTTAACAGTTCAGGAACTTTTAGTTTGGAGTCTTTTGGGTTTCTAGGTATACGATCATATCATCAGCAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTACTCTGGCTGGGACTTTATGTTGAAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCCGCACGGGAAATGCTTTCTTTTTCCATTAAATGTCTAATGTTGTTGGCTGTAGGTTTTGTATCACAGGTGGTTTTTATTACCTTAAACGCCTTCTACGTAGATTTTACTGGGGACTTTAATCATAAAAGGATTACTGGATTTTTTTTGTCAAATATTTTTTTCTGTGTTTGTAGAGATGATCATGTGATTCTTATTTTTAATTCTGTTTTTATATTTATATCATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCCTAGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTAATACGTGGATTTGGATTCAGTTAGCTAAGTATTTTTATTGAGATTTTTGCATCGTTAATCAGTGATGGGTCTCAGTTTTATTTTTTTGTTATAATGTCCTTTCCTGGTTTTGATATTACAGTGATGCAGCTTCATTGGATGATTTAGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGGATTGGTACCAATTTTTCTTTGAATACCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAAACTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGTTGTATCTTTCAAGAATTTATCTCCTCTGAGTTTTTCGTTTATATTACGCCCACAGAGTGTCATAGTAGCCTCCGTGATCTTTTGTATTTCTGTATGCTGAATTTGTAATATCTCCCATTTCATTTTAAGTAAACTTATTTGGATCTTCTCTTTTTTTTTTTTCTTGGTTAATCTTACTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTGTTTATCTTTTTTTTTTTTTGTATATTTTTGTTTCAATTCCGGCTTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTCTGCTGGGTTTAGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGTGTGACCTTAGATTGTCTATTTATTACTTTTTCAGGGCTTTAGATGTAGGTTAATATTCTCGATTTCTATTATGTAGGTATAATGCTATAGAGATTCCTATTCTGGTGTATTTCGAGATTTGTTTTCAGATTTGGGGAGCTCCTTTGCTTGGTTTTGTAGTACTCAGTATTTGTCTGAAAAATACTATCTTCCTTCATTTATAAACTTAGTTTCCTGGATACAAATTCTTGGCTATTTGTTTAGTTTAAAGACTACCGGTAGGACCCCAATCCACTTGTCTTTGCTGTATCCCAGTTTTGATAGGTTGTGTCCTACTATTGTTCAGTTGAGATTTTTTATTTCTATCTGGTTCATTGTTCACCCAATGATTTTTTCAGGATTGTTAATTTGATGTATTTGCAATGTCTTTGAAATTTCTTTTAGAGGTTGGTTCAATCTTAATTCCTATAGTCTGACATAGTACTTGTCATTTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTAGCCTATATATATTTCTATATTAGAGGAATGTTCCATGTGCTGATGAATAAGTCTTATGTTTATTTGTTATTGCGTCTTCTCCCTTATCCCTGTAAATCCGTTGTTGTAAGGAGTGTAGTTTAAAGTACATTGTTTTTCTTTGTTAACTTTTCTATCTTGATGATCTGTATCTAGTGCTGTCATTAGATGCTAAGTCCCTATTGCTGTGTTACCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTGGGGCGCTCAGTATTAGGCACCCATGTTTAGGATTGTGATATTTTTCGTTCGTCCTTTTATCATTATAATGTCTCTCTTTGTATTTTTTACCGGCTGTTGCTTCGTTTGTTTTGTCTGATACAGAATAGTTATTCCTGCTTGCTTTTTAGTGTCCATTGCATGGGATATCTTTCTACCTTTACCGTATATGAGTCCTTAGTATTGGTGAGTCTAGTAGAGACAGTAGATACTTAGTTAGGTAATTCTCCATTCTGCCATTCTGTATCTTTTTAGGTGGAGCGTAGGCCATTTATTCAGTGTTAGTATTGAGATGGTACTATTCTATTCATCGCGATATTTGGTGCCTAGATACCTTGGTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGAGGATTAAACGCAAAAACGGAACGCCGAA 3: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.590575, "nblock" : 5778, "sequence_length" : 2399, "blocks_per_base" : 2.408504, "nsample" : 29150, "trim" : [ 200, 29090 ] } 3: TCGGTGCGCATTCAAGCCAACCCTACCTCCTTCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTCGCGCCCCTTCCGCTTGAATCGCCTTCACTAAGTATGTTGGTCCCACATGATAATTCGTAGATTGCATCGACTCCGTTTCCGAATGAACGTGGATCGGCATTTCAGTAGTAGGCTGGGGCGGATGGAAAAATCAGCGTGCCCTCTCCACAATCGATCATCCGTTTGTCGGCCGGTACGGTAGGACCAGTCGAACTACTCAACCATTACCTAGATGAGGAATCCGTTGATTTTGCATCGTTGGGATCAGTTGGTAAATTCAATAGAATAGTTGTCCTAGACAGGTTGATGGATGGGAGAACAAAGCGGGGCCATGGGCGGGATAATGGGCGGTTGGAAATGGGATACAGCTCCATTCAGCCCTACACTTCCATTCCTCGTATGCTACGATGAATCAGGCCATGCATATCGCTTTTATTGGCCATCAGTATAATTCCAGCCTACCGATATCGATCCATCCTAATTAAGTAGGTGGCTCTCAATGGATCAAGAGATTTAAACATCACAGGTAGGATGATCGTCAGGACTCAGACCTTCAGGAATAATCATGCGCCACCTCCTTTCACATGTCATTCAGTGTGGTATGGTAGGGTAAAATCACCTTCATTCGTACTTGCCTTCAGGCGATTTCAGATAGGTTTGAAACGAATCTGTTGGTATCGGACGAAAATTGGATCAACATACATCAGTAAACTGCATTCCGCTCGACATAGCTCTGGACTTTAGCATAGATACATTAGGCTGGCATGAATTGTGGGAGGAGCCCTCGGAATGGACTTGTCTGGGAGAATTTGAGATCCTAAAAGTGAGATGGCACTACTCTACTCCTCGTCGATGGATCCGCTTGTACAATACAATCCAATTTCTAGATGAATGAAATAGTAGGTGGTTGTGGGCCAGCATGGAGCAGGACCCTTCACTACAGCCACCTCCGATGCGGGGTTCATTGAGGTGCATTCTGCGTGCCTCTGTCGTGCAGGTACCTTAATAAGCCGGGAGGCATTTCAAAGCTGAATCAGGAGGTAAAAATGAGTAGGATTTTAAGCCGCCGAATGGGAAGAACATCCTCTCGTTACCGGCGCAGAATGCACTTCCTGCCGGCCAGGCCAGTCAAAATGTACGCCAGCCAGGAATCAGGAATAAAGACTCAGTCAGTGAACGGCGAGCCCGCGCTGTGCTTCCGCCACAGTGGTAGAAAAACGTCCAGGATCAAATTACGTATTTCAATTCCGTGGAACAATTTGAAAGGCTAAAGCCTAGTAAAATTCAACTGGACGGACAGAGCCCGGAAAAAGCCTCCCTACCCCACTTCAAAGCGGAATGAACGCGGGCTCAAACCCTACAAAATCGCGTATTAAGTAACATTTCGCCCGTACTACACTATCAATCAGCCATTACCTCCGTAAAATACCAAATAGGTGAGAAAATTTGCATCCGCCATCGTACAGCCATCAAATTAGCCCACTCAAAATGGAATTTTGGATGAAAAAGGTATCATTCGACTCACCCCCTTACTTAATATTACGCTGCTCGCGTAAATATTTCCCTTTATACCATCCCAATGCATGCCCAATGCTTAGCATCATGTATTTCGACTCAACACCCACCATGCGCGATGGCGTAAATATAGAAACCAGATACGAGATTTCAGGCATGCCACGCCAGCGGTCAGTATAAACCGGGCAAAATCAAATAGCCGCCAGGCTCCGGACGGTGAGGCGAGATACCGGGTAGATGGGCTGGCGCGCTACATACTCCCAGAAATAGGGCATGGAAGCGCTCCATCGGCGCGATACCAAGATGGGCCGGCACCACTTCACGCCAGCATCTAAATTTTGCCTCGATAAAAGAAATCGTCCCCGACGGTACCGACCCATGAACAGGCATTTTGTTGCCCCGTCGCGCTTGCCACCCATTCCAAAATAGGTGGCGCCAGTACGAAGCGGGCTGAGCTAAACGCGCGCACCGCTCAATGAATCGCATCATCAGCCTTCATCCTCGTACCAGATACCATGGCCTCCTCCACAGCCCGAAAATAGCAAATATCCCTTCAATATGCGCTGATGGGCTGGAAACAGTATGAATAGGCGGGCGGGCCAATGGAATGGCTATCAACAGCCAGCGAATGAACCGCTTCCAATAGGTAGAGCTAAATGCGCGGAGAAATTTGGCCTCCCGTACCGGCCAAACCTAATCAAAATTCTCCTTCGACGGGCAGCTACAGGCGAACAGCGCCAGTGAAAAACATGCGGAGCGGATGGGGTCCGTATCGCTTCGACGAAACTGCCTCCAGCAGGAAAATCAGCTGTCTCATGAAGCGGTGCGCATGAAA - 2/19 Test #3: test_raw_call .................... Passed 13.23 sec + 2/19 Test #3: test_raw_call .................... Passed 17.60 sec +test 7 + Start 7: test_rawrnnrf_r94_call + +7: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +7: Test timeout computed to be: 10000000 +2: GTTACGTATTGCTCTTGCCTGTCTAAATACAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCCAGCTACTCTCAGGGAGCTGAGGGCAGGAGGAGATCCTTAAACCCAGGGCCAGGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAATCGTTTCCGTAATTATTTTAGAAATGTAGATATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTATTTCTCTTCGATTGCCTCATGGTTTCAGCATTTGAAGTGAGTGTCTAATGAAAGCGTTCATTTGAAGATAGTACAAAACTATTTGTAATTAACTAGACCAGAGAGACCTTTGACAATATTTTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTCTGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAAGTGAGTATGCATAGTTCAAGTAGTCTATAGGATTTTCCCTAAGAATGAGGACCTTGAAATTCCTTTTAATCTTTTGATTATGCTTTATTTCGCTTAGCATTAAAATGTATAGTGAAGGAAGTTGTGGCATCGCAGGGGAGATAGGAATCTTTAAGAAGGTAATATAAAATGGAGTATGAACAAATTGGAAATCACTGCTGAAGTTAGAAAATACTAGTTTGTACATATGTAAATTACCAACTGCGATAATAAAAAATATAAATATATAGTACATAATAAAATATGCCAAATATGTTACATACACACATTTTAATTTCATAACAAAGAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTGGATTGAATATTTCACTTTTCACATTACTGCTTTCTCACAAGGATTGATAGTGTTTTCTATTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGAGTATCATTTCAGCTTTCCATCCATTTTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAAACACAAACGTTGTTGAAACTTAGAGGTAGAATAAAATATTAAATATTTCTTGCCCTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATAATATCTTTCTCCGCGGATGGTCTACTTTCTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCATTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCACATTATTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGGATTTTCATTCATTGTTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCTTGGCCTTAGGCCATGCAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTAGGCTGAATTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCCTGTGCTCTGCAGTACATAGTGCGTAGTGGCCTCAATAGCCCAGCTGCTATTGATGAGTATTGCCATACTCACATTCATATCTAAACCAGAGATGGTGATCTCTTTCTTAAGGGCCGGATAACAGACATTTTGTGCTTGTGGACCACGTAGTTTCATCTCACCTGCTTGACTCTACTGTATTGTAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTAATACAGTTCCTGCTGTCTTACTTTCAAAATACATGGCACATATTGCTCCCTACTTGGAATGGCTTTCTACTCTCACTCTTCCTGTTGCTTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAATTGTATCAGATGCCCCTGTTTTGCAACCTTAGCACCTGTCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTTGTGTTATGTTTCCCTGACTTCTGGGTGTGAGTTCTTAGAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTAGGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTCCAAAAAAAACACATATGCCTGGGCCTATATGGACTTCAGTCTGAGTGGCTACAAGGTCTTGGTGGGCATTTGCATTTCTAGAACCCCTGAATGAAGTGCCCCAAAATGTATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTGGACTGTATTCCATTTTTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGCTCAGACAGGCACTTAGAATATGCTTTGCTGGCTTTAAAAGTCATGGATGGTACAAATGCAAGCATGGGAACACTATTCACCAACAGAGATGTTGTGGTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTTGACACTGTTATTCAGAGAAAGAAAAGCCTCCTTGTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCGTGTATTTGTACCCAGAAGTGCCACAAGTTATCTTCTCAGAATGGAATCTGCTTTTGTGATCTTATTTTGAGGGGATAGACTGTAATGGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTTTAAATAGAGGCCTCTAGTTTTTTTTTGTTTTGTTTTGTTGTTTTTTTAAATGGGGTCTTGCTCTATGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCACCCAGGCCTGTCTAATTTTTTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGGCTGATCTTGAACTCCGGTCAAAGTAGTCACACTCCCACCCATCCTAAAGCACTGGGATTACAGGCAGGGAGCCTTATGCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAGCGTTTGCATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTTTAACATTCAATATGCTTAATTTCTTTTTCTTTTTTTTTTTTTTTTAATAGTGACAGAGGTCTCTTTTCTCTGTTGCCAGGCAGTCCTATGAACTCCTGACCCAAAGCCTTGGGATTACACAGACACTGGTGTCTATGCCTGGCTGATTTCTTTATAAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAGAAACGAAGTGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTTAGCCTTAGAGAGGGCTGTCCAACTTGATCTTTGGTAGAAGAGTATCCACTGCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGTCCAGATGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTATTATGTTTTTTCTTCTTTACTTACAGTGTTTTGGTTTCGTTTCAGCAGCTCCCACACATGTGTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCCTTGTTTAGTAAGTAACCACAGCTGAAAATCTTAAAGATCAGGTATATATGAAGTAATTTCAGTTTGATTAGATCATCTCTTATCTTGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAAGTCTCCTTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTAATAGAAAGGTATGACACATACACATTACATGCAGAATATGATAGAAGTGATTGTCTGGATGCAAAATATTGACTGTGTGTCCAATACAGCTTCATGAGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGGTATTCTAGGAAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAAATAGTCTAGTTTTAGTGGGGTTATAAAGTATGACGGGAGAAAAAAGAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAGAAAACTATACTAGAGCACTTCATTTAATTTCTTAGGGAGTGGATGGAAGTCAAGTAAAGACTTTAGGTAACAAATATGCCTGTGGACCTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAGGAACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGGAAACTTATAATCCCAGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAAAAATCGTCAGATCAGATGTAGACTCCCACTATCACAAGAACAGCAAGCATGGGGAGCCACCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACACACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTCACATTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTTCCAGCTTAATTAGCCCAAAATCCAAGTCCAAAGTACTCATCTGAGGGATAAAGGCCAAAGATCCCTTCCATCTATGAGACTATAAAATCAAAGGAAGTAAATTAGATTGCTTTCTAAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAGGGGCTGTAGGCCCCAGAAAGTCCTGACCAGCTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGGCTCCATGCCTCACATCCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCTTACTCTCTGCTGTTTTCACAGGCTGGCGTTGAGCCTCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCCTGCCATTCTGGGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTGAGCGGTGCCCCAGTGGGGACTGTAGGGGGTCCAACTACCCCACATTCCCCTTCTGTACTGCCCTAGTAAGGGTTCTCCACTGGGGCCTGCACCTACAGCCAGCTTCTGCCTGGACATCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAACGTTAATTCTTGATTGCTGTGCACCAGGCCCCACATATAAGCCGCCAAGGCTTAGAACTTACACTCTCTAGGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCCAAGCAGCAGGCCCTGGCCTAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATGGGCTGCCACGTGAAGACTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGGATTTCTACTCCCAGAAATGGGTTTTTTTTTCTTTCTACCTCATGGTCCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGGATATGCTTTCAGAATCAGCCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGATACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAACCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTAGCCCTCCATCCTGTTCCAACACTACACCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTGGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCACAGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAGAACAAAATTGGCAGAGTCCTTTTTTATAATAAACCATTCTCAATAACCCTCCTTGGTAACAATATTGAATTCATTCATGAGGAATGAGCCCTTAACCAGAGCAATCATCTTTTGGCTAAGCTTCTCTTCCAATACTGCCACACTACAAGTTAAAGTTTCCCAACACATGAACTTTGGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTTGTTTTGTTTTTTTTGTTTTTTCAGAGTTCTAGATAAAGCAAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTATATAGTTTCTTAGATTACAAATTGGTAAGAAATAATGTGATACACTTTCTCCCACCTTAATCAATGGATTGTGAGGGTGTAAGTTTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTTTTCATAGTAAAATCAGTTGGTGATTTGATAGCATTTATTCTTCAATTATTTTAGCTTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAAAGTTTTAGATGTTGCTAAAATAAATGTGAAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCACCAAAGTACGTAAGTCCTCACTTAACATCTCAGTAGATTCTTGGGAGTACAGCTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTAATTCTACTGTGAATGTCATGGCCCAATAAGAAAAGGACAGGGGCGGACTTACTAGGCATTTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGCTAATAGTTTGAATAGGAAAATTGGTGAGGAAATAGCTGTAGTTGTTTCCAGGTGAGCTCACTTATTCACCCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGAACATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGGAAGCATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTAACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTAACTGGCCATTTCTGCCTTTCAAAAAAATTAAATACATTACTCAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTTGCCCAAAGGGCTTTGACTCCACAAGTTTACTTTTTTTAGTAATAGTTGAGGGACGAGGAGAGGTATAGAGAGGACACAGGATAATAAGTGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTGCAAGGACTCAAGATCTATCTTCTTTTAGTGGAATGTCTACTCATTTCAGCTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCATACTCATCCTATTTTCCTGTTGCTTTGCTCTAGAACTCTGCATCTGTTATCCAGGAGTGCGTGTCTTCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCAGCCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTGACATTTCTGCAAACATGCTTGATTTTTTTAAATGTATTTCATTTGCAAGAAATCTGGCAAAAGCATTTCTCATTTTTTTTTATGTAAGTATTTTATCTGATAAAGGGGAAGTTTAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCGGACGATGAATAGACAAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAAATTAACCAGCAATACGTA +2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.175321, "nevent" : 12397, "sequence_length" : 4584, "events_per_base" : 2.704407 } +4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } +4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG + 3/19 Test #4: test_rawrgrgr_r94_call ........... Passed 18.13 sec test 8 Start 8: test_event_table @@ -215687,23 +215729,13 @@ 8: 12394 64075 0.000000 0.000000 1072576662 8: 12395 64078 -2.000000 -0.000000 1073238564 8: 12396 64083 0.000000 -2.000000 1072952450 - 3/19 Test #8: test_event_table ................. Passed 0.26 sec + 4/19 Test #8: test_event_table ................. Passed 0.24 sec test 9 Start 9: test_mappy 9: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "mappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" 9: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 9: Test timeout computed to be: 10000000 -5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } -5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG - 4/19 Test #5: test_rawrgrgr_r941_call .......... Passed 13.69 sec -test 10 - Start 10: test_seqmappy - -10: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" -10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -10: Test timeout computed to be: 10000000 9: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa (score = nan) 9: idx signal pos base current sd dwell 9: 0 182.803436 0 C 0.041604 0.315691 0.652851 @@ -280101,7 +280133,17 @@ 9: 64392 59.267578 0 C 0.041604 0.315691 0.652851 9: 64393 58.711945 0 C 0.041604 0.315691 0.652851 9: 64394 57.415466 0 C 0.041604 0.315691 0.652851 - 5/19 Test #9: test_mappy ....................... Passed 0.73 sec + 5/19 Test #9: test_mappy ....................... Passed 0.44 sec +test 10 + Start 10: test_seqmappy + +10: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" +10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +10: Test timeout computed to be: 10000000 +5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } +5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG + 6/19 Test #5: test_rawrgrgr_r941_call .......... Passed 19.46 sec test 11 Start 11: test_squiggle_r94 @@ -285247,113 +285289,13 @@ 11: 603 G -0.348534 0.163240 9.530728 11: 604 C 0.161046 0.266937 15.063374 11: 605 T 0.194787 0.502125 16.019983 - 6/19 Test #11: test_squiggle_r94 ................ Passed 0.31 sec + 7/19 Test #11: test_squiggle_r94 ................ Passed 0.27 sec test 12 Start 12: test_squiggle_r10 12: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "squiggle" "--model" "squiggle_r10" "/build/reproducible-path/scrappie-1.4.2/reads/test_squiggles.fa" 12: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 12: Test timeout computed to be: 10000000 -4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } -4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG - 7/19 Test #4: test_rawrgrgr_r94_call ........... Passed 14.56 sec -test 13 - Start 13: test_licence - -13: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "license" -13: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -13: Test timeout computed to be: 10000000 -13: This software is subject to the terms of the Mozilla Public -13: License, v. 2.0. If a copy of the MPL was not distributed with this -13: file, You can obtain one at http://mozilla.org/MPL/2.0/. -13: -13: (c) 2017 Oxford Nanopore Technologies Ltd. -13: -13: -13: -13: The vectorised math functions 'src/sse_mathfun.h' are from -13: http://gruntthepeon.free.fr/ssemath/ and the original version of this file is -13: under the 'zlib' licence. See the top of 'src/sse_mathfun.h' for details. - 8/19 Test #13: test_licence ..................... Passed 0.04 sec -test 14 - Start 14: test_help - -14: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" -14: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -14: Test timeout computed to be: 10000000 -14: Scrappie is a technology demonstrator for the Oxford Nanopore Technologies -14: Limited Research Algorithms group. -14: -14: Basic usage: -14: * scrappie events Base call from event based data. -14: * scrappie help Print general help or help about specific Scrappie command. -14: * scrappie licence Print licensing information. -14: * scrappie raw Base call directly from raw signal. -14: * scrappie version Print version information. -14: * scrappie squiggle Create approximate squiggle for sequence -14: * scrappie mappy Map signal to approximate squiggle -14: * scrappie seqmappy Map signal to sequence via basecall posteriors -14: * scrappie event_table Output table of events for read -14: -14: This project began life as a proof (bet) that a base caller could be written -14: in a low level language in under 8 hours. Some of the poor and just plain odd -14: design decisions, along with the lack of documentation, are a result of its -14: inception. In keeping with ONT's fish naming policy, the project was originally -14: called Crappie. -14: -14: Scrappie's purpose is to demonstrate the next generation of base calling and, as -14: such, may change drastically between releases and breaks backwards -14: compatibility. Newer versions may drop support of current features or change their -14: behaviour. - 9/19 Test #14: test_help ........................ Passed 0.03 sec -test 15 - Start 15: test_help_events - -15: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "events" -15: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -15: Test timeout computed to be: 10000000 -15: Usage: events [OPTION...] fast5 [fast5 ...] -15: Scrappie basecaller -- basecall via events -15: -15: -#, --threads=nparallel Number of reads to call in parallel -15: --dump=filename Dump annotated events to HDF5 file -15: --dwell, --no-dwell Perform dwell correction of homopolymer lengths -15: -f, --format=format Format to output reads (FASTA or SAM) -15: --hdf5-chunk=size Chunk size for HDF5 output -15: --hdf5-compression=level Gzip compression level for HDF5 output (0:off, -15: 1: quickest, 9: best) -15: --licence, --license Print licensing information -15: --local=penalty Penalty for local basecalling -15: -l, --limit=nreads Maximum number of reads to call (0 is unlimited) -15: -m, --min_prob=probability Minimum bound on probability of match -15: -o, --output=filename Write to file rather than stdout -15: -p, --prefix=string Prefix to append to name of each read -15: --segmentation=chunk:percentile -15: Chunk size and percentile for variance based -15: segmentation -15: --slip, --no-slip Use slipping -15: -s, --skip=penalty Penalty for skipping a base -15: --temperature1=factor Temperature for softmax weights -15: --temperature2=factor Temperature for softmax bias -15: -t, --trim=start:end Number of events to trim, as start:end -15: --uuid, --no-uuid Output UUID -15: -y, --stay=penalty Penalty for staying -15: -?, --help Give this help list -15: --usage Give a short usage message -15: -V, --version Print program version -15: -15: Mandatory or optional arguments to long options are also mandatory or optional -15: for any corresponding short options. -15: -15: Report bugs to . -10/19 Test #15: test_help_events ................. Passed 0.02 sec -test 16 - Start 16: test_help_event_table - -16: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "event_table" -16: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -16: Test timeout computed to be: 10000000 12: #one 12: pos base current sd dwell 12: 0 T 0.273674 0.499835 0.755774 @@ -287882,76 +287824,6 @@ 12: 2523 T -0.083219 0.260580 7.076826 12: 2524 A -1.159863 0.143544 8.895534 12: 2525 T -0.833608 0.215293 6.887578 -16: Usage: event_table [OPTION...] fast5 [fast5 ...] -16: Scrappie basecaller -- basecall via events -16: -16: --licence, --license Print licensing information -16: -o, --output=filename Write to file rather than stdout -16: --segmentation=chunk:percentile -16: Chunk size and percentile for variance based -16: segmentation -16: -t, --trim=start:end Number of events to trim, as start:end -16: -?, --help Give this help list -16: --usage Give a short usage message -16: -V, --version Print program version -16: -16: Mandatory or optional arguments to long options are also mandatory or optional -16: for any corresponding short options. -16: -16: Report bugs to . -2: GTTACGTATTGCTCTTGCCTGTCTAAATACAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCCAGCTACTCTCAGGGAGCTGAGGGCAGGAGGAGATCCTTAAACCCAGGGCCAGGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAATCGTTTCCGTAATTATTTTAGAAATGTAGATATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTATTTCTCTTCGATTGCCTCATGGTTTCAGCATTTGAAGTGAGTGTCTAATGAAAGCGTTCATTTGAAGATAGTACAAAACTATTTGTAATTAACTAGACCAGAGAGACCTTTGACAATATTTTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTCTGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAAGTGAGTATGCATAGTTCAAGTAGTCTATAGGATTTTCCCTAAGAATGAGGACCTTGAAATTCCTTTTAATCTTTTGATTATGCTTTATTTCGCTTAGCATTAAAATGTATAGTGAAGGAAGTTGTGGCATCGCAGGGGAGATAGGAATCTTTAAGAAGGTAATATAAAATGGAGTATGAACAAATTGGAAATCACTGCTGAAGTTAGAAAATACTAGTTTGTACATATGTAAATTACCAACTGCGATAATAAAAAATATAAATATATAGTACATAATAAAATATGCCAAATATGTTACATACACACATTTTAATTTCATAACAAAGAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTGGATTGAATATTTCACTTTTCACATTACTGCTTTCTCACAAGGATTGATAGTGTTTTCTATTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGAGTATCATTTCAGCTTTCCATCCATTTTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAAACACAAACGTTGTTGAAACTTAGAGGTAGAATAAAATATTAAATATTTCTTGCCCTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATAATATCTTTCTCCGCGGATGGTCTACTTTCTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCATTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCACATTATTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGGATTTTCATTCATTGTTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCTTGGCCTTAGGCCATGCAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTAGGCTGAATTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCCTGTGCTCTGCAGTACATAGTGCGTAGTGGCCTCAATAGCCCAGCTGCTATTGATGAGTATTGCCATACTCACATTCATATCTAAACCAGAGATGGTGATCTCTTTCTTAAGGGCCGGATAACAGACATTTTGTGCTTGTGGACCACGTAGTTTCATCTCACCTGCTTGACTCTACTGTATTGTAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTAATACAGTTCCTGCTGTCTTACTTTCAAAATACATGGCACATATTGCTCCCTACTTGGAATGGCTTTCTACTCTCACTCTTCCTGTTGCTTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAATTGTATCAGATGCCCCTGTTTTGCAACCTTAGCACCTGTCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTTGTGTTATGTTTCCCTGACTTCTGGGTGTGAGTTCTTAGAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTAGGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTCCAAAAAAAACACATATGCCTGGGCCTATATGGACTTCAGTCTGAGTGGCTACAAGGTCTTGGTGGGCATTTGCATTTCTAGAACCCCTGAATGAAGTGCCCCAAAATGTATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTGGACTGTATTCCATTTTTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGCTCAGACAGGCACTTAGAATATGCTTTGCTGGCTTTAAAAGTCATGGATGGTACAAATGCAAGCATGGGAACACTATTCACCAACAGAGATGTTGTGGTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTTGACACTGTTATTCAGAGAAAGAAAAGCCTCCTTGTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCGTGTATTTGTACCCAGAAGTGCCACAAGTTATCTTCTCAGAATGGAATCTGCTTTTGTGATCTTATTTTGAGGGGATAGACTGTAATGGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTTTAAATAGAGGCCTCTAGTTTTTTTTTGTTTTGTTTTGTTGTTTTTTTAAATGGGGTCTTGCTCTATGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCACCCAGGCCTGTCTAATTTTTTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGGCTGATCTTGAACTCCGGTCAAAGTAGTCACACTCCCACCCATCCTAAAGCACTGGGATTACAGGCAGGGAGCCTTATGCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAGCGTTTGCATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTTTAACATTCAATATGCTTAATTTCTTTTTCTTTTTTTTTTTTTTTTAATAGTGACAGAGGTCTCTTTTCTCTGTTGCCAGGCAGTCCTATGAACTCCTGACCCAAAGCCTTGGGATTACACAGACACTGGTGTCTATGCCTGGCTGATTTCTTTATAAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAGAAACGAAGTGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTTAGCCTTAGAGAGGGCTGTCCAACTTGATCTTTGGTAGAAGAGTATCCACTGCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGTCCAGATGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTATTATGTTTTTTCTTCTTTACTTACAGTGTTTTGGTTTCGTTTCAGCAGCTCCCACACATGTGTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCCTTGTTTAGTAAGTAACCACAGCTGAAAATCTTAAAGATCAGGTATATATGAAGTAATTTCAGTTTGATTAGATCATCTCTTATCTTGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAAGTCTCCTTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTAATAGAAAGGTATGACACATACACATTACATGCAGAATATGATAGAAGTGATTGTCTGGATGCAAAATATTGACTGTGTGTCCAATACAGCTTCATGAGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGGTATTCTAGGAAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAAATAGTCTAGTTTTAGTGGGGTTATAAAGTATGACGGGAGAAAAAAGAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAGAAAACTATACTAGAGCACTTCATTTAATTTCTTAGGGAGTGGATGGAAGTCAAGTAAAGACTTTAGGTAACAAATATGCCTGTGGACCTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAGGAACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGGAAACTTATAATCCCAGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAAAAATCGTCAGATCAGATGTAGACTCCCACTATCACAAGAACAGCAAGCATGGGGAGCCACCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACACACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTCACATTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTTCCAGCTTAATTAGCCCAAAATCCAAGTCCAAAGTACTCATCTGAGGGATAAAGGCCAAAGATCCCTTCCATCTATGAGACTATAAAATCAAAGGAAGTAAATTAGATTGCTTTCTAAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAGGGGCTGTAGGCCCCAGAAAGTCCTGACCAGCTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGGCTCCATGCCTCACATCCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCTTACTCTCTGCTGTTTTCACAGGCTGGCGTTGAGCCTCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCCTGCCATTCTGGGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTGAGCGGTGCCCCAGTGGGGACTGTAGGGGGTCCAACTACCCCACATTCCCCTTCTGTACTGCCCTAGTAAGGGTTCTCCACTGGGGCCTGCACCTACAGCCAGCTTCTGCCTGGACATCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAACGTTAATTCTTGATTGCTGTGCACCAGGCCCCACATATAAGCCGCCAAGGCTTAGAACTTACACTCTCTAGGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCCAAGCAGCAGGCCCTGGCCTAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATGGGCTGCCACGTGAAGACTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGGATTTCTACTCCCAGAAATGGGTTTTTTTTTCTTTCTACCTCATGGTCCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGGATATGCTTTCAGAATCAGCCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGATACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAACCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTAGCCCTCCATCCTGTTCCAACACTACACCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTGGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCACAGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAGAACAAAATTGGCAGAGTCCTTTTTTATAATAAACCATTCTCAATAACCCTCCTTGGTAACAATATTGAATTCATTCATGAGGAATGAGCCCTTAACCAGAGCAATCATCTTTTGGCTAAGCTTCTCTTCCAATACTGCCACACTACAAGTTAAAGTTTCCCAACACATGAACTTTGGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTTGTTTTGTTTTTTTTGTTTTTTCAGAGTTCTAGATAAAGCAAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTATATAGTTTCTTAGATTACAAATTGGTAAGAAATAATGTGATACACTTTCTCCCACCTTAATCAATGGATTGTGAGGGTGTAAGTTTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTTTTCATAGTAAAATCAGTTGGTGATTTGATAGCATTTATTCTTCAATTATTTTAGCTTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAAAGTTTTAGATGTTGCTAAAATAAATGTGAAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCACCAAAGTACGTAAGTCCTCACTTAACATCTCAGTAGATTCTTGGGAGTACAGCTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTAATTCTACTGTGAATGTCATGGCCCAATAAGAAAAGGACAGGGGCGGACTTACTAGGCATTTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGCTAATAGTTTGAATAGGAAAATTGGTGAGGAAATAGCTGTAGTTGTTTCCAGGTGAGCTCACTTATTCACCCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGAACATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGGAAGCATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTAACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTAACTGGCCATTTCTGCCTTTCAAAAAAATTAAATACATTACTCAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTTGCCCAAAGGGCTTTGACTCCACAAGTTTACTTTTTTTAGTAATAGTTGAGGGACGAGGAGAGGTATAGAGAGGACACAGGATAATAAGTGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTGCAAGGACTCAAGATCTATCTTCTTTTAGTGGAATGTCTACTCATTTCAGCTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCATACTCATCCTATTTTCCTGTTGCTTTGCTCTAGAACTCTGCATCTGTTATCCAGGAGTGCGTGTCTTCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCAGCCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTGACATTTCTGCAAACATGCTTGATTTTTTTAAATGTATTTCATTTGCAAGAAATCTGGCAAAAGCATTTCTCATTTTTTTTTATGTAAGTATTTTATCTGATAAAGGGGAAGTTTAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCGGACGATGAATAGACAAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAAATTAACCAGCAATACGTA -2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.175321, "nevent" : 12397, "sequence_length" : 4584, "events_per_base" : 2.704407 } -11/19 Test #16: test_help_event_table ............ Passed 0.05 sec -test 17 - Start 17: test_help_raw - -17: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "raw" -17: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -17: Test timeout computed to be: 10000000 -17: Usage: raw [OPTION...] fast5 [fast5 ...] -17: Scrappie basecaller -- basecall from raw signal -17: -17: -#, --threads=nparallel Number of reads to call in parallel -17: -f, --format=format Format to output reads (FASTA or SAM) -17: --hdf5-chunk=size Chunk size for HDF5 output -17: --hdf5-compression=level Gzip compression level for HDF5 output (0:off, -17: 1: quickest, 9: best) -17: -H, --homopolymer=homopolymer Homopolymer run calc. to use: choose from -17: "nochange" or "mean" (default). Not implemented -17: for CRF. -17: --licence, --license Print licensing information -17: --local=penalty Penalty for local basecalling -17: -l, --limit=nreads Maximum number of reads to call (0 is unlimited) -17: --model=name Raw model to use: "raw_r94", "rgrgr_r94", -17: "rgrgr_r941", "rgrgr_r10", "rnnrf_r94" -17: -m, --min_prob=probability Minimum bound on probability of match -17: -o, --output=filename Write to file rather than stdout -17: -p, --prefix=string Prefix to append to name of each read -17: --segmentation=chunk:percentile -17: Chunk size and percentile for variance based -17: segmentation -17: --slip, --no-slip Use slipping -17: -s, --skip=penalty Penalty for skipping a base -17: --temperature1=factor Temperature for softmax weights -17: --temperature2=factor Temperature for softmax bias -17: -t, --trim=start:end Number of samples to trim, as start:end -17: --uuid, --no-uuid Output UUID -17: -y, --stay=penalty Penalty for staying -17: -?, --help Give this help list -17: --usage Give a short usage message -17: -V, --version Print program version -17: -17: Mandatory or optional arguments to long options are also mandatory or optional -17: for any corresponding short options. -17: -17: Report bugs to . -12/19 Test #17: test_help_raw .................... Passed 0.05 sec -test 18 - Start 18: test_help_squiggle - -18: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "squiggle" -18: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -18: Test timeout computed to be: 10000000 12: 2526 T 1.226973 0.187758 8.868385 12: 2527 A 0.326663 0.163646 8.637399 12: 2528 A 0.776825 0.159115 7.422457 @@ -288934,33 +288806,6 @@ 12: 924 G 1.467776 0.122657 8.328823 12: 925 T 1.156435 0.141427 7.031790 12: 926 A 0.296050 0.161997 7.324443 -18: Usage: squiggle [OPTION...] fasta [fasta ...] -18: Scrappie squiggler -18: -18: --licence, --license Print licensing information -18: -l, --limit=nreads Maximum number of reads to call (0 is unlimited) -18: -m, --model=name Squiggle model to use: "squiggle_r94", -18: "squiggle_r94_rna", "squiggle_r10" -18: -o, --output=filename Write to file rather than stdout -18: -p, --prefix=string Prefix to append to name of each read -18: --rescale, --no-rescale Rescale network output -18: -?, --help Give this help list -18: --usage Give a short usage message -18: -V, --version Print program version -18: -18: Mandatory or optional arguments to long options are also mandatory or optional -18: for any corresponding short options. -18: -18: Report bugs to . -13/19 Test #18: test_help_squiggle ............... Passed 0.03 sec -test 19 - Start 19: test_version - -19: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "version" -19: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 -19: Test timeout computed to be: 10000000 -19: scrappie 1.4.0- -14/19 Test #19: test_version ..................... Passed 0.02 sec 12: 927 C -0.836542 0.154324 7.840771 12: 928 T 0.824620 0.159619 7.303357 12: 929 T 1.516868 0.156615 7.500086 @@ -290590,17 +290435,202 @@ 12: 603 G -0.572062 0.335164 12.230327 12: 604 C 0.561030 0.467363 9.792212 12: 605 T -0.235200 0.581865 6.671800 -15/19 Test #12: test_squiggle_r10 ................ Passed 0.39 sec -6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 + 8/19 Test #12: test_squiggle_r10 ................ Passed 0.28 sec +test 13 + Start 13: test_licence + +13: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "license" +13: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +13: Test timeout computed to be: 10000000 +13: This software is subject to the terms of the Mozilla Public +13: License, v. 2.0. If a copy of the MPL was not distributed with this +13: file, You can obtain one at http://mozilla.org/MPL/2.0/. +13: +13: (c) 2017 Oxford Nanopore Technologies Ltd. +13: +13: +13: +13: The vectorised math functions 'src/sse_mathfun.h' are from +13: http://gruntthepeon.free.fr/ssemath/ and the original version of this file is +13: under the 'zlib' licence. See the top of 'src/sse_mathfun.h' for details. + 9/19 Test #13: test_licence ..................... Passed 0.04 sec +test 14 + Start 14: test_help + +14: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" +14: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +14: Test timeout computed to be: 10000000 +14: Scrappie is a technology demonstrator for the Oxford Nanopore Technologies +14: Limited Research Algorithms group. +14: +14: Basic usage: +14: * scrappie events Base call from event based data. +14: * scrappie help Print general help or help about specific Scrappie command. +14: * scrappie licence Print licensing information. +14: * scrappie raw Base call directly from raw signal. +14: * scrappie version Print version information. +14: * scrappie squiggle Create approximate squiggle for sequence +14: * scrappie mappy Map signal to approximate squiggle +14: * scrappie seqmappy Map signal to sequence via basecall posteriors +14: * scrappie event_table Output table of events for read +14: +14: This project began life as a proof (bet) that a base caller could be written +14: in a low level language in under 8 hours. Some of the poor and just plain odd +14: design decisions, along with the lack of documentation, are a result of its +14: inception. In keeping with ONT's fish naming policy, the project was originally +14: called Crappie. +14: +14: Scrappie's purpose is to demonstrate the next generation of base calling and, as +14: such, may change drastically between releases and breaks backwards +14: compatibility. Newer versions may drop support of current features or change their +14: behaviour. +10/19 Test #14: test_help ........................ Passed 0.04 sec +test 15 + Start 15: test_help_events + +15: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "events" +15: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +15: Test timeout computed to be: 10000000 +15: Usage: events [OPTION...] fast5 [fast5 ...] +15: Scrappie basecaller -- basecall via events +15: +15: -#, --threads=nparallel Number of reads to call in parallel +15: --dump=filename Dump annotated events to HDF5 file +15: --dwell, --no-dwell Perform dwell correction of homopolymer lengths +15: -f, --format=format Format to output reads (FASTA or SAM) +15: --hdf5-chunk=size Chunk size for HDF5 output +15: --hdf5-compression=level Gzip compression level for HDF5 output (0:off, +15: 1: quickest, 9: best) +15: --licence, --license Print licensing information +15: --local=penalty Penalty for local basecalling +15: -l, --limit=nreads Maximum number of reads to call (0 is unlimited) +15: -m, --min_prob=probability Minimum bound on probability of match +15: -o, --output=filename Write to file rather than stdout +15: -p, --prefix=string Prefix to append to name of each read +15: --segmentation=chunk:percentile +15: Chunk size and percentile for variance based +15: segmentation +15: --slip, --no-slip Use slipping +15: -s, --skip=penalty Penalty for skipping a base +15: --temperature1=factor Temperature for softmax weights +15: --temperature2=factor Temperature for softmax bias +15: -t, --trim=start:end Number of events to trim, as start:end +15: --uuid, --no-uuid Output UUID +15: -y, --stay=penalty Penalty for staying +15: -?, --help Give this help list +15: --usage Give a short usage message +15: -V, --version Print program version +15: +15: Mandatory or optional arguments to long options are also mandatory or optional +15: for any corresponding short options. +15: +15: Report bugs to . +11/19 Test #15: test_help_events ................. Passed 0.04 sec +test 16 + Start 16: test_help_event_table + +16: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "event_table" +16: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +16: Test timeout computed to be: 10000000 +16: Usage: event_table [OPTION...] fast5 [fast5 ...] +16: Scrappie basecaller -- basecall via events +16: +16: --licence, --license Print licensing information +16: -o, --output=filename Write to file rather than stdout +16: --segmentation=chunk:percentile +16: Chunk size and percentile for variance based +16: segmentation +16: -t, --trim=start:end Number of events to trim, as start:end +16: -?, --help Give this help list +16: --usage Give a short usage message +16: -V, --version Print program version +16: +16: Mandatory or optional arguments to long options are also mandatory or optional +16: for any corresponding short options. +16: +16: Report bugs to . +12/19 Test #16: test_help_event_table ............ Passed 0.04 sec +test 17 + Start 17: test_help_raw + +17: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "raw" +17: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +17: Test timeout computed to be: 10000000 +17: Usage: raw [OPTION...] fast5 [fast5 ...] +17: Scrappie basecaller -- basecall from raw signal +17: +17: -#, --threads=nparallel Number of reads to call in parallel +17: -f, --format=format Format to output reads (FASTA or SAM) +17: --hdf5-chunk=size Chunk size for HDF5 output +17: --hdf5-compression=level Gzip compression level for HDF5 output (0:off, +17: 1: quickest, 9: best) +17: -H, --homopolymer=homopolymer Homopolymer run calc. to use: choose from +17: "nochange" or "mean" (default). Not implemented +17: for CRF. +17: --licence, --license Print licensing information +17: --local=penalty Penalty for local basecalling +17: -l, --limit=nreads Maximum number of reads to call (0 is unlimited) +17: --model=name Raw model to use: "raw_r94", "rgrgr_r94", +17: "rgrgr_r941", "rgrgr_r10", "rnnrf_r94" +17: -m, --min_prob=probability Minimum bound on probability of match +17: -o, --output=filename Write to file rather than stdout +17: -p, --prefix=string Prefix to append to name of each read +17: --segmentation=chunk:percentile +17: Chunk size and percentile for variance based +17: segmentation +17: --slip, --no-slip Use slipping +17: -s, --skip=penalty Penalty for skipping a base +17: --temperature1=factor Temperature for softmax weights +17: --temperature2=factor Temperature for softmax bias +17: -t, --trim=start:end Number of samples to trim, as start:end +17: --uuid, --no-uuid Output UUID +17: -y, --stay=penalty Penalty for staying +17: -?, --help Give this help list +17: --usage Give a short usage message +17: -V, --version Print program version +17: +17: Mandatory or optional arguments to long options are also mandatory or optional +17: for any corresponding short options. +17: +17: Report bugs to . +13/19 Test #17: test_help_raw .................... Passed 0.05 sec +test 18 + Start 18: test_help_squiggle + +18: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "help" "squiggle" +18: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +18: Test timeout computed to be: 10000000 +18: Usage: squiggle [OPTION...] fasta [fasta ...] +18: Scrappie squiggler +18: +18: --licence, --license Print licensing information +18: -l, --limit=nreads Maximum number of reads to call (0 is unlimited) +18: -m, --model=name Squiggle model to use: "squiggle_r94", +18: "squiggle_r94_rna", "squiggle_r10" +18: -o, --output=filename Write to file rather than stdout +18: -p, --prefix=string Prefix to append to name of each read +18: --rescale, --no-rescale Rescale network output +18: -?, --help Give this help list +18: --usage Give a short usage message +18: -V, --version Print program version +18: +18: Mandatory or optional arguments to long options are also mandatory or optional +18: for any corresponding short options. +18: +18: Report bugs to . +14/19 Test #18: test_help_squiggle ............... Passed 0.04 sec +test 19 + Start 19: test_version + +19: Test command: /build/reproducible-path/scrappie-1.4.2/build_sse2/scrappie "version" +19: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_sse2 +19: Test timeout computed to be: 10000000 +19: scrappie 1.4.0- +15/19 Test #19: test_version ..................... Passed 0.06 sec 2: ATTTTTTTAACAATTGGAAATTCAGTTTTTTGTATTTAACGAATTTTTTTATTTTCTAACTGTGAAAATATATTGGACGGTCGTTTTGTATATTTGGCATATTATTTGTAATATTTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTGTATATTAATCATGCGATTATGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTGCTTTATTGTCCTGGCTGAATATTCTTTACTGTTGGATGGAAGGATGTTAATGACATCAAATATCTTGTTAAGATCTCAATTGCAAGATTTTATATTGTATTATTTTTTTAGTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTCTTTACTGGTGATTTGACATTTTGTACCTGTCACCTGAGCAGTATTATCAGTGGTAGTCTTTTATCATATCATCTCTTGTTCCCCAAATTATCAAGTCCGTGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGATGATGTTTGGTTTTCATTCTAGAGTTACTTCATGATAATGATCTCCAAATTCCATTCAAATTTGCTGAAAATGCATTATTTCGTTCCTTTTGTGGCTGGTAATATTCCATAGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGAGCTGGTTTTCATATTTTTTCAGGTACAGAATTGCTGCTATAAACATTTATTTTCATTACGTAATCTATTTCGTATAATGACTATTCTGGGCCAAAGGTAGGTCTAAAAGATCTGCTTTTAGTTCTTTAAGATCTCCACACCTTTACATTAATGGTTATACTAGTTTACATTCCCATCAATATTCTTAAATTGTTTCCTTTTCACCAATCACCAACATCTATTGTTTTGATTTTTTTATTAGGGGCCGTTCTTTCAGGGTGAGTGGTATCCCACTGTGGTTTTTTGATTTACATTTCCCTGATCATTAGTGATGTTGGGCATTTTAATACAGGCCATTTATATCTTCTTTGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTCTCCATCTCTGTCAGGTTGTCGTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTTCTTGGTCGCGAAGTCTTTTGCCTAATAACCCAATGTCTCTAGAAGGTTTTCAACGTTATCTTCTAGAATTTTTTTATAGGGTTTCATCTTAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTTGTATAAGGTGAGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCAGGTTACCAATTCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTGTTGAGGATCAGTTGGCTGTAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATGCCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAATGTGATGCCTCCAATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGAATGATGGTGGTATTTTTTGATGAGGAATTGCATTAGTTGTAGGTACTTTTGGCAGTATGGTCATTTTCACAATATTGATTTACTCATCCATGAGATAGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTGCAGCTAATGTAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCGCCTTATACTTGAGGCTACTGATTTGTGTACATTAATTTTGTATCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTGGGTTTTCTAGGTATACGATCATATCATCCTTAAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCGCACGGGAAATGCTTTCTTTTCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTATCACAGGTGGTTTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGATGCTGGATTTTTTGTCAAATATTTTTTTTCTGTGTTTGTGAGATGATCATGTGATTCTTGTTTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGATTTTTTGCATCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTTGTTATATGTCCTTTCCTGGTTTTGATATTACAGTGATACTGCTTCATTGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAGCTAGGATTGGTACCAATTTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCACAAACTATTTTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGGTTGTATCTTTCCAGGAATTTATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTGAGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTTGTTTTATCTTTTGTATGTTTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTTTCTGCTGGGTTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATTTATGTAGGTAATGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCACAGAAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTAGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCAGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAATTTTTTTACATTTCTATCCTGATTTCATTGATGCCCAATGATTTTCTAGGAAGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTTGGGGTTGATTTCCAATCTTAATTCCTGTAGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCTGTATATATTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTGCATTTGTTGAATCTTCTCCACATATCCTGTAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCATTGGGTACTGAAGTCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTCCTGGATTCGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTTTACCGGCTGTTGCTTTAAGTTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTAGTGTCCATTTGCATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTAGTGAGTCTAGTAGAGACAGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTTAAGTGGAGCATTTAGGCCATTTACATTCAGTGTTAGTATTGAGATGAGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTTTTTTTAAATCATTGCATTATTGTTTTATAAGATCCTGTGAGAGGTTAAACGCAAAACAGACGCCGAAGACT 2: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.459646, "nevent" : 5787, "sequence_length" : 1694, "events_per_base" : 3.416175 } 2: CTCAGTGCATTAACCAACCTACCTTCAATGCTCCACCATCCAGCCTCGGTAATAATTACGCGCCCCTTCCCTTGAATCACCTTCACTAAAAGCCATGTTGAATCCCACAATGTAGGCCATCAGCTCAGGAAATAGAACATCAGCATGGGAGGTAGTAAGGCAGATGAAAAAATCATGCCTCTCATCAGTGCCAGTAGAATGACTCATTTCTCAATACCTAAAATAAAGAAATCGATGATTTACATGAGATCAGAATGGGCCGTAACAAACAGGTGCTCTGACAGGTGCCCAATCGATAGAGAACAAAGCAGGGAATAATGACTGGTTGACCAGAGCCAATCCTTCCATTCAACCCTACACTATTCCAATGATATTGTCACATATCACTTGTGTGCCATCAATATATTCAACACTTCTCCAATCCATATGGCCAACCAGATCAAAGGTGGCATCACAAGCCAAGGCCGGTGTCAGGAATTTCAGACCAAATATCATGCCTTCATTCAGTAGGTAGCGTATCTGCCGCTGTAAAATCAGACAAAGCCAGATCCGCCATAATGCTTCCTTCCACTCGGCCTCACTTCTCATCATTAAACCTCAGGCATGCCGAAATGGAACATGGAGCCCTAAAATGAATAGCCTCATCAGTGGGTAATCCCACTGTCATCTAATCAAAGGCCCCATACATTCATCAGAATAGAAATGGTGGTGGCATGGAACCCTTCTGAACAACATCTCAAATGCAGTGCTTCAATGAAGTAAACCTGCTCATAGGAGGCAGCTAAGCTAAAATCAGGAAAATTGCATGGTTACAAGCCCGCCGAAATGAATACAAAGCGCAAACCACTACCAGCCCCAGAATAATCAATAAATATACATAGCCAGAATCGAATAAGTCAGTATGACGCCGCGCTTCAATAGTAGCAATCAGATCAGCATTATTTATCCTTCAATCCAATAGGAAATTCCTTCAAATGCTAGACGGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAATGAGCTCAATCTCCATATTAATGCTTCATTGCCATCTCCACTATCATCCTTATTATTCTCAATAAAACCATAAACAAGTGAGGCCCATCCATAAATAAATGCAGCCATCCAGATAGCCTCAAAATAAGGCTGAGTATCATTCATTCACCCCTTGCCAATATTCTCATCCTTCCCTTCTCCATCCCAGCCATGCCATCTTAACATCGCTCAGCATTTTGATAGCGTAAATAGATAGGTCAATTTCAGAGCAGTCAAAATAAATAGGCTGGAAATCAAATGTGAGGCAGATGCCAGTGGAATGGTGGGCGCTCCATTGACACCACTTCCTCCAGCTCAATTTTCTCGATAAAAGAAATCGATCTGAACAATTTTGTTGCCCGTCGCTTATTCCAAATAGTGGCGCTGACTAAACACCGCTCAATGAATCATCATCAACCTTCTACTCGTACCAGATGCCTCATCAGCCAAAATCAAATATCCTTCAATAAGTGGGCAGTATGAATGGTGGGCCAATGGTACTATCAGCCAGAATGTTCTTCGAAAATAGTGACCTAAATGGAAAATTTGGCCTCGTACCAGTAAATAAATTCTGACGAGCATCAGTGAAAAAAACATGTAGACGGATGGGTCGGCTGCCTCCAGCATTTCCATCTCATGAAGCGGGCGCATGAAA -16/19 Test #2: test_events_call ................. Passed 17.00 sec -6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } -6: TCTGGTTTTTTATTATGTTTTATCTTCCATA -6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } -6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA -17/19 Test #6: test_rawrgrgr_r10_call ........... Passed 18.21 sec +16/19 Test #2: test_events_call ................. Passed 20.90 sec 10: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa -- score 11581.230469 over 12818 blocks (0.903513 per block) 10: block pos 10: 0 -1 @@ -303421,25 +303451,31 @@ 10: 12815 -1 10: 12816 -1 10: 12817 -1 -18/19 Test #10: test_seqmappy .................... Passed 5.40 sec +17/19 Test #10: test_seqmappy .................... Passed 6.51 sec +6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 +6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } +6: TCTGGTTTTTTATTATGTTTTATCTTCCATA +6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } +6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA +18/19 Test #6: test_rawrgrgr_r10_call ........... Passed 21.21 sec 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.020645, "nblock" : 80790, "sequence_length" : 9342, "blocks_per_base" : 8.648041, "nsample" : 81106, "trim" : [ 200, 80990 ] } 7: CAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTAACCTGTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGGCTGAGGCAGGAGAATCCTTAAGCCAGGGCAGAGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAGAAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAAGAAATGTAGGCTATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTGGTGAGTATCTAATGAAAGCGTTCATTTAAGAATGTACAAGAAGCTATTTGTAGTAACTAGACCAGAGAAGACCTTGACAATATTTACTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGAAATAAATGCTATGCAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTAACAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTATTTCGCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGAAATCACTGCTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAGCCATATAATTACATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAAGTGTGTTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTTCACTTTTCATACAACTTTCTCACAAAGTTGATAAGTGTTTATTTTCTATTTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGGAAGTATCATTTCAGCTTTCCATCCATTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAGAAACGTTGTTGAAAACTTGAGGTAAGAATAAAATATTAAATATTTCTTTCTTTTAGTGTGTGTAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGTCTGCTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTACAATGCAATCATCAATAAGCTTAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCTAGCCATTGCTGCTTTAAGTTTTTCATTCTATTGTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCACTTGGCAGCTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTGAGTGCTTTCTCCATCTGCAAAGTTGGCTCATGGTGCTCTGCAATTACATAGTGCGTAGTAAGCACTCAATGTAGCTGCTGTATTGATGAGTATTGCCATACTCACGCTCATATCTAAACCAGAGATGGCAGTCTTTCTTTAAGGGCCGGATAACGAACATTTTGTGCTTGTGGACCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAGAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAGCAACAGTATGTGCAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGGGGATGCGTTTAGGATAGCATACTGAACTAGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTGTACTCACTCTTCCTGTTGCTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTTATACTCTACAAGGTCTTTCCTGATCCTCTGAGCTGTATCAGATGCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAATTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTAGATTTCAATTTATTAAGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTAAAAACACATATGCCTGGGCCTATATGCTGGACTTCAGAGATCTGAGTGTACAAGGTCTTGGTCAGGCATTTGCATTTAGAACCCCCTGAATGAAGTGCCCCAAAATATATGTTGAATAAAGCAATAAAACCCAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTATCACACTGTAGTTTCTGCATTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGACTCAGACGAGGCACTTAGAATATGCTTTGGCTTTAAAAGTCATGGATGGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAGAAAGAAAAAGCCTCCTTATTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTATTATTTGTACCAGAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTAAATAGAGGGCCTAGTTTTTGTTTTGTTTTGTTTTTAAATGGGGTCTTGCTCTGTGTGCCCAGGTTGGAGTGCAGTGTTATGGTCACTTAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTGTAGATGTGCACCACTTAGGCTAATGTCTAATTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGACTGATCTTGTGAACTCCAGGTCAAATAGTCCACACTCCCACCCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCCTTATGCCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTGACTTAGTAAACGTTTAATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAATATGCTTGATTTCTTTTCTTTTTTTAATAGTGACAGAGGTCTCTTGCTATACCTGTTGCCCAGGCTGGTCTAGAACTCCTGACCCAAAGCGGGATTACAGACATGATGATCCACCATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCCTCCAGGCCTGGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGGTTAGCCTTAGAGAGGGCTGTCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCCGTGGCTTCTCCATCCAGAGACAAATAAGAGAGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGATTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTAGTATGTTTTCTTCTTTACTTACAGTGTTTTGGTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTAAATAACCTGTGAAGCATTTAATGACTTTGTTCCTTGTTTAAACAAGTAAAAACCACAGCTAGTAATCTTAAAGATCGGAGCTGTATATATGTAAATATTCCGTTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGAAGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCCAATACAGCTTCATGAATTATTAGCATTGCGAGACAGACCTAAATGAATCAGGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAGAAAACTATACTGGAAGCACTTCATTTAATTTCTTAGGAGTGGATAGGAGATAAGTAAGACTTTAGAGTAACAAATATGCCTGTGGACACTCTGAAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAAGAACTGGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGTAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTAAGCATGGGAACCACCCCAAGATTCATTTGCCACCTCCCACCTGGTCTCTCCCTTACCCGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACCACACACCATTCCACTTGGCCTCTCCCAAATCTCATGTCGGTTTACTCACATTCCCAAAGTCAACTGTGGCTTCCCAATGGTCCCCAAAGTCTTGCTCATTCCAGCTTAATTAGCCCAGAAGTCCAAGTCCAAAGTACTCATCTGAGATAAGGCCAAAGTCCCTTCCATCTATGAGCCTATAAAATCAAAGAAGTAAGTTAGATTACTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCAAACAAAGGGGCTGTAGGCCCCAGAAAGTCTGCAATCAATAAGGCAGTCATTAAGCTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACATCCAGCCCACTGATGCAGAGTGGGCTCCCACAGCCTCATGCAGCTCGACCTCTGTGGCTCCATGCCTCACATCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTAACCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCACCATTCTGGGGGTCTGGAGGATGGTGGCCCTCTTCTCATGGCTCCCACTAGGCGGTGCCCCGAGTGGGGACTGTAGGGGTCCAACTGCCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCGCAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTTGCTGCAATGCTGTTACATGTAAGCCGCCAAGGCTTGGGGCTTGCACTCTCCTGGAAGCCCTGGGCTATACGCTGGCCCCTTACAGCCATGAGTGGGGATGCCAGGACGCAAGTTCCCGAGACTGCCAAAGCAGCAAGGCCCTGGCCACAAAACCATTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACCTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAATGGGTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTAAATGCTGGTTCAGTTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGCAGAGGCAAGAATGTACCCTTCTCTTTGCTAGAGCATAAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAATTTGCAAGCTTTCCACTTCTTCTGTCTTCTGAGCCTCCATCCTGTTCCAACACTGCCTATTACTCCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAAGACATTTATTTCTCACAGTTGGCTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCTGGCAAGGGCTTTCTTGCTGCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAAACAGAATTGGCAGAATCCTTTTATAATAAAGCCATTCTCAATAACCCACTCCCTTGGTAACAATATTGAATTATTCATTCATGAGGACAGAGCCCTTATATGGCTTAATCATCTTTTAATGCAACCTACTCTTCCAATACTGCCACACTACAGGATTAAGTTTCCAACACATGAACTTTGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAATTGGTAAGAAATAATGTGGTACTTTCTCCCACAACTTAATCAATGGATTGTAGGTGTAAAGTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCGAGTAAGCTCAGTGTTTTCATAGTAAAATCAGTTGGTGATTTGTTAGCATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCACATTTCCATCTTCTGGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACGTAGTCCTCACTTAACATCTCAGTAGATTCTTGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATGTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTGTTCACTGTGAATGTCATGGCCCAATAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATATTATCACCAGATGGGAAACAGGGTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAATATATTCACCGTATTCATAAAGGAATAAAAGATTTAGTTTAGACAAAACAATGCTATTCAATATATTCAGTTAATGTGGTATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAGAATTACTGTGGTGCTTAAAGGCTTTGACTCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGGAAGAGGTATAGAGAGGACAGGATAATAAGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGATGTCTACTCATTTCCCCTGTTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCATACTCATCACTATTTCCTGTTGCTGCTCTAGAGACTCTGCATCTGGTATCCAGGAGTTGGTATTGTCTTCATCTTGCCTTTTCAGTGTAAATCACCCTGTTTTTCCTCCTTATGCCCAGTAATAGGTGATCGTACATCCCTTCACAACAATTAGGACTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAGCTGAACTGGAAAGAGAATTGCTTTTGACATTTCTGCAAACATGTGATTCTTTTTAAATGTATTTCATTTGCAAGAGGAAATCTGGCAAAAGCATTTCTCATTTTTATGTAAGTGTTTATCTGATAAAGGGGAAGTTTAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCGGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCACCAGCAAATTGACCAGCAATACGTGATA 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.012573, "nblock" : 64090, "sequence_length" : 4696, "blocks_per_base" : 13.647785, "nsample" : 64395, "trim" : [ 200, 64290 ] } 7: GGTATTGCTTCGTTCAGTTACGTGTTGCTCTTGCCTACATCGCTCTATCTTCAGCGTCTGCTTGGTGACATACCCATGAAACTATAATTTTTTAACAATTGGAAATTCTTCAGTTTTTATGTACAACAATTTTATTTTCTAACTGTGAAAATATATGGACATCTGATTAGTTTTGTATATATTTGGCATATTGTTTAGCAATATTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCGTATGTAATCATGCGGTGTGAATAATGACGGTTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTTGCTTTATTGTCCCTGCTTGGCTAGATATTCTTACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTAATTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTTCTTTACTGGTGATTTTGACATTTTGTTGTCTCATCACCTGAGCAGTATTGCACTGTATCCAGTGTTGGCAGTCTTTTATCCCTTATCCTCCTCTGTTCCCCCAGAACCCTCAAGTCCGTTAACATCATTTATGCCTTTGCATCTCATAATTATACTGATGAAGAGATGATGTTTGGACCATTCCTGGAGGTTACTTCACTTAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTCTTTATTCACTCTTTGATTGATGGGCATTTGGGCTGGTTTCATATTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTACCTAGCATATACGATACGTATCTATTTCGTATAATGACTTCTTCTGGGCCAAAGGAGTAGGTCTAAGATCTACTTTTAGTTCTTTAAGGAATCTCCACACCATTTCACATTGTGGTTATACTAGTTTACATTCCCATCAAACATTCTTAAATTGTTTCCTTTTCACCAGTCACACCAACATCTATTAGTTTTGATTTTATTAGGGGCCATTCTTTCAGGAGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATAGTACAGGCCATTTGTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAGGTTTTCTCCATCATGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCTAAGCTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCGAAGTCTTTGCCTAACCCAATGTCTAGAGGTTTTTCAACGTTATCTTCTAGAATTTTTATAGGGTTCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTCAGGGATCAGTTTCATTCTTCGACATGCTTGGGTTTACCGAATTATTCAGTGTCATTTGTTGATAGGATATCCTTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCAGTTAACATAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGGTATAGTTTGAAGTCAAGTAATGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGGGAATTGCATTGGAATTTGTGGGTGCTTTTGGCAGTATGGTCATTTTCACAATATTGATTTTACTCATCCATGAGAATGGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAATATATATATATATATATTTGCAGCTATTAATAAAGGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGTATACTTAGGGCTACTGATTTGTGTACATTAATTTGTAATCCTGAAACTTTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTAGGGTTTCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCCTGGCTAGGACTTCAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCCTTGTCTTTGTTCGATCGCACGGGAAGTAACAACTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTGTCACAGGTGGTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGGACTTTAATCATAAAGGGATGCTGGATTTTTGTCAAATATTTTTCTGTGTTTATTGGGATGATCATGTGGTTCTTGTTTTTAATTCTGTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGAGTTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTGTTATGTGTCCTTTCCTGGTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAGATTCAGCTGTGAATCCGTCTGGTCCTGGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTAGGCTTATTTGGATCTTCTCTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAATAACCAGCTTTTTGTTTTATCTTGTATGTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTCTTTTTCTGCTGGGTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGTGTGACCTTAGATTGTCTATTTGTGCTTTTCAGACTTTAGATGTAGGTATTTAATGTTATCAGTTTCTATGTAGGTATAATGCTATGGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCGGTTTTGATAGGTTGTGTCACTACTATTGTTCAGTTGAAAGAATTTTTACATTTCTATCCTGATTTCATTGTTCACCCAATGATTTTTCAGGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTGAAGATTTCTTTTTGGGGGTTGATTTCCAATCTTATTCCCTATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTATATGTTCTATATTGGAGAATGTTCCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTAGGTGAATGTTCTCCACATATCACTGTAAATCCGTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTAGGGCTCCAGTATTAGGCACTTACATGTTTAGGATTGTGATATTTTCCTAGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTGTGTCCATTTATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTGGAGGCTGAGTCTAGTGAGACGGTAGATACTTGGTTAGTGGTATCCATTCTGCCATTCTGTATCTTTTAAATTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTAAATCATTGCATTATTGTTTATAAGATCCTGTGAGAGGTTAAACGCAAGCAGACGCCGAAGATG 7: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.041418, "nblock" : 28890, "sequence_length" : 2268, "blocks_per_base" : 12.738095, "nsample" : 29150, "trim" : [ 200, 29090 ] } 7: CGGTGCGCATTCAGCCAGCCCTACCTCATTCACCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTACGCCCTTCCGCCGAATCGCCTTCACAAAGCCTTGTTAGTCCCACATGGCCAGTGGCCGGATTGTCGGCTCCGTTTCGGAATGGACGTGGATCTAGTGTGATTGTTGGGAGCGGATGGAAAATCAGCGTGCCTCTCCACCAATCGATCATCGGGTGGTGCGGTGGATGATCGTTACTCGCCAATACAGATGAGAATCCGTTGATTTTGCAGCTCGATTGGGATCGGATGGTGCATTAATAGACCGGGTATCTGAACGGTGATGAATGGGAGAGACAGTGGAACCGGCATTAGGCGGGATAATGGGCGGTTGGAAGAAATGGAATGATACGGCTCATTCAATTTCACTTCATTCACCGTCATGATGAATGGTGTCGCATATCGCTTTGATGGCATCAGTATAATTCCGCCTTCTACCGATATCGAATCCAATAATTAGTAGGTGACTCAGCTGGATCAGGATTTGACGTCGCGGGTGGATGGGATGGGGTTTCGGATATTTGGAATGTCATTAGCCACCTCGGCTGCAGTGTCGTTTCGGTGATGGTGGTGGGGGGTGTGAAATCACCTTCGTCTCGTTGCGCCGGGAGAGGCGTTCAGATGGGGGTGGAAACGGGATCTGGGTATCGGACGAAAGGAGTGGATCAGCATGCATCGATTAGGCTGCATTTCCGCTCGACATGAAACGGATGACTAGCGTAGATCATTGGTGATGGGTGTGGGAGGGTGACATCAGATGGACTTGTAGTCTGGGATTTGGGTCCTAAAGTGGGATGACATACTCTGCATATCGTCGGTGGATCCGCTTGTGCGTGTCTGCTGTCAGAGATTTCGTGCGTTCAATGCGGTAATGGATGGATAAATGGTGGATGGTGGTTCGTTGGCGTGGAGCGGGACCTTTCACTGGGATGATACCTCCGGTGCGGTTGAACCTCGGTGGGTGCGATTCTGCGGTGGATTCTCTCGTCGTGCGGGTAATAATGATTTCGACTGGAATCGGAGGTGTGGAGTGGGTTTTGGTGCCGGATGGGTGGAATTCTCTCGTTGGCGTAGATGAGTGCGCTCTGCCGGTTTGGATGGTCATTGGAAATGTGCATGATGGGGATCAGGATGGATGGTCGGTGTGGGCCCTGTGCTTCATGAGTCGGTGGAAGACGATCGGATCAATTGTTGTCATTTCAGTCAAATGGAATAATTTGAGAATTTAAATTCCCAATTGAATTAGCCTGGATGGACAGGTAGAAAGCCTATGAAAAGCCCATGAAGTGGATGACTGGATCAGTCCTACCAGAATCGTATTAGTATTTCATTATGTCCTTCCACTAATAGATATTATTGATTATCTCCGATAAAATATATGAATGGGTGTGGATTTGTCATAAATCATTGTATCCGTTATTATAAGGAAATCGTTTGGTTGAGGGTGTCGTTGGCTCACTTGTACTTAGTATTCGTATATTAGTCATTTCCCTTTATCATCCCCAGTGTATACAATCTTAGCATCATCGTAATTTCGTTCATTCACCCACATTTTTGATGGCGTAAATCTCATAGAATAGATGGGTTGGGATTTCAGATGTCTGCATGGCCCGGTCAGTATGATGAACGGAGTATCAGATCATGAATCGGATGGTGGATGGGTCGGCCGATTAGATGGTTGTATTATCTCCCAAGAATGGACGTGGAGTGACAAATGGTAAGATGCAAGATGGATTGATACCAGCTTCATCAATCTAATTTTTATAGAATAAGAAAGTCGATCTGGGTGCCGACCGTGAACAGATTTGGAACGCTTGTCAGCCTTACTTATTCTCCAGATAGTGTATAGGTGAATGGTACAGGATAGAATATATGTGCCAGCTCAATCAGATCGTAAATCGTTATTCTTCAAATATAGTCTTAGTCATATTTACTCATCTGACCGAAATCAGATATCTTCAATATAGCGGCAAGTGGATAATGACAGTGTAGATGGTGGATGATAATGGAATGTTACTATCAATGGCGAATGAACCTTTCGAGAAATGGTAGAGCTAGTAGGTGGGAGAATTTGGCCTCCGTACCAGATAAATTTCAAATAAATTCATCATGGGCGGCTGGTGAACGCATCAGTGGAAAAACATATGGATGGATGGGATCGTATCGATGGTGAGCTATCAGCGAATCAGTGGCATTTCCAATCTCATGGGCGGGTGAAGGT -19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 60.69 sec +19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 77.32 sec 100% tests passed, 0 tests failed out of 19 -Total Test time (real) = 65.67 sec +Total Test time (real) = 95.02 sec make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' - rm -fr -- /tmp/dh-xdg-rundir-TUHpQnbD + rm -fr -- /tmp/dh-xdg-rundir-dVFktdJn dh_auto_test --builddirectory build_plain - cd build_plain && make -j6 test ARGS\+=--verbose ARGS\+=-j6 + cd build_plain && make -j5 test ARGS\+=--verbose ARGS\+=-j5 make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_plain' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j6 +/usr/bin/ctest --force-new-ctest-process --verbose -j5 UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_plain/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/scrappie-1.4.2/build_plain/DartConfiguration.tcl Test project /build/reproducible-path/scrappie-1.4.2/build_plain @@ -303479,12 +303515,6 @@ 5: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "raw" "--model" "rgrgr_r941" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" 5: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain 5: Test timeout computed to be: 10000000 -test 6 - Start 6: test_rawrgrgr_r10_call - -6: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain -6: Test timeout computed to be: 10000000 1: 1: 1: CUnit - A unit testing framework for C - Version 2.1-3 @@ -303863,24 +303893,38 @@ 1: tests 71 71 71 0 0 1: asserts 506 506 506 0 n/a 1: -1: Elapsed time = 4.171 seconds - 1/19 Test #1: unittest ......................... Passed 5.50 sec -test 7 - Start 7: test_rawrnnrf_r94_call +1: Elapsed time = 5.211 seconds + 1/19 Test #1: unittest ......................... Passed 6.12 sec +test 6 + Start 6: test_rawrgrgr_r10_call -7: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" -7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain -7: Test timeout computed to be: 10000000 +6: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "raw" "--model" "rgrgr_r10" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +6: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain +6: Test timeout computed to be: 10000000 3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.325922, "nblock" : 16158, "sequence_length" : 9258, "blocks_per_base" : 1.745301, "nsample" : 81106, "trim" : [ 200, 80990 ] } 4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.295786, "nblock" : 16158, "sequence_length" : 9512, "blocks_per_base" : 1.698696, "nsample" : 81106, "trim" : [ 200, 80990 ] } 5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.278788, "nblock" : 16158, "sequence_length" : 9559, "blocks_per_base" : 1.690344, "nsample" : 81106, "trim" : [ 200, 80990 ] } 2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.273349, "nevent" : 16119, "sequence_length" : 9415, "events_per_base" : 1.712055 } 3: GCAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTATGTCTTAACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCAACTACTCTCCGGGAGACTGAGGCAGGAGAATCCTTAAACCCGGGGCAGGGTTGAAGTGAGCCGAGGTCTCACCTCATTGCACTCCAGCCTATGGGTGACAGGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAAATCAGTTTCCCGTAATTATTTTAGAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTAGTAGGTATCTAATAGAAAGCGTTCATTTAAGGAATAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATGTATTCTGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTATAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTTTATTTCCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAAGAAGGTAATATAAAAATGGAGTATGAACAAAATTGAAATCCTTTGCTATGAAGTTGAAAATACTAGTTTGTACATGTAAGCCTGTACGATAATAAAAATATAAATATATAATTTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTAGTTGAATATTTCACTTTTCACGTACAACTTTCTCACAAAGTTGATAGTGTTTATTTCTATTTTTGTATGTGCAGCCTCATATTATTTGTCTTTTCTCGTTAGAGTATCATTTCAACTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAACACAAACGTTGTTGAAACTTGAGGTAGAATAAAATATTAAATATTTCTTTGCCTTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCTGGAAATGCAAAATTAGAACATGCCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTTTCCTCATCTTCCCTCATTTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTAGCAAGTTTTTCATTCATTGTTTTTTTTCCATGTATTTCTGTAAGCCTCTTGTTGCAATCTTCACCTTGGCGTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGGTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTTTTCTGCAGTACATAGTGCGTAATGGCCTCAATGGTAGCTACTGTATTGATGGAAGTATTGCCATACTCCCTTCATATCTAAACCAGAGATGGTGATCTTTCTTAAGGGCCGGATAACGAACATTTTTGTGCTTATGGACCACGTAGTTTCTGTCTCACCTGGCCCGGCTCTACTGTATTGTAGAAGCAGCCATGGGCGTCTCTATGTGAATGGGCGTGACTGTGTTTTCAAAAGCAACAGTATGTGCAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTGGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCGCTCTTCCTGTTGCTTTGGCAATGCTTATTTATTTTTGCCAGGTTTTCTTCCTTATACTCTACAAAGGTCTTTCTGATCCTCTGAGCTGTATCAGATGCCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTATGTTTCCCTGACTTTGGGTGTGAGTTCTTGAAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTATTAGGTTGTAGATTTCGAGCTTTTGATCTCAAAGATCAGCTGTGCATTTAAAAAACACATATGCCTGGGCCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCTAGATAAGAAGTGCCCCCAAAATATATATTGAATAAAAAGCAATAAAACAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTATTTACTAACTTCTGATACAGACTCAGACAGGCACTTAGAATAACTGCCTTTAAAAGTCATGGATGTTCAAATGCCGTAATGGAACACTATTCACCAACAGAGATGTTGTGGACTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAAAGTGAGTTAGCAAATGCTGTTAGAAACTGTCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACAGTTCCATTAGTATTTGTGCCAAGTGCCACAAGTTATCTTCCTCAAGAATGAATCTGCTTTTGTGATCTTATTTGAGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTAAGGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGCTTCTAGTTTTTTTGTTTGTTTGTTGTTTTTAAATGGGGTCTTGCTCTGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGGTCTCACTGTGTTTCCCAGGCTGATCTTGTGAACTCCGGTCCGTAGTCACGCCCACCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCTTATGCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTCTTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCTATACTGTTGCCCAGGCGGTCCTAGACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATCCTATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGACCATAGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTGTAGCCTTAGAGAGGGCTGTCCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTGAGGGCCACTGAGGGTCATGGTGGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGAGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTCTTCTTTACTTACAGTGTTTTTGGTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACGGCGTGAGGGCTGCTTTTGGAACAAATTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTGAAACATTTAATGACTTTGTTCTTGTTTAAATAAGTAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATTGTAAATATTTCATTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATATTCCTTATCAAGGAAGCTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATATGATAAGTGATTGTCACCAGATGCAAAATATTGACTGTGTGTCAATACAGCTTCATGAAATTATTAACATTGCCTTGAGACAGACCTAAATGAATCAAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCCAGATAGAGATTATATAGAAGTAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTAGAAACACTTCATTTTAATTTCTTAGGGAGTGGATAGGAAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAAGACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTTTGCAACATGGGAACCACCCCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGAACGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAATCTCATGTCGGTTCCCTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTCCAGCAATTAGCCCAAAGTCCAAGTCCAAAGTCTCATCTGAGATAAAGGCCAAGATCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAAGGGCTGTAGGCCCCAAAGTCTGCAATCCAACTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCGCATCCAGCCCACTGATGCAAGTGGGCTCCCCACAACCTCATGCGAAAAGCTCTCGACCTCTGGCTCCATGCCTCATCCAGCCCACTGATGCAAGAGTGGGCTCCAGCAATCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTACCTCTCTGCTGTTTTCACAGGCTGGCGTTGGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCTGCCATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCCACTAGGCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCATAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCAGGCATTTCTATACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTGCTGTGCACCACATGTAAGCCGCCAAGGCTTAGAACTTACACTCTCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCAAGCAGCAAGGCCCTGGCCCACAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATAGGCTGCCACGTGAAGACCTTGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAAATGGGTTTTTTCTTTCTACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGGAATCAGCCAGGTCACCTGTTGAGATGCTTTGCTGTAGAAATTTCTTCCACAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAACAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCAACCATCTAACAAGTCTCTAGGAAATTTGCAAACTTTCCACTTCTTCCTGTCTTCTAGGCCCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCGAACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGTGGAGGTTAGGAAGTCAAGGTTGAGGTCCCTACATCTAGCAAGGGCTTTCTTGCTGCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAAACAAGTGTAGAGATCCTTTTATAATAAAACCATTCTCAATAACCCCTCCTTAGTAACAATGAATTATTCATTCATGGGGATAGAGCCCTTATGTGAAGCAATCATCTTTTAATGCAGCTTCTCTTCCAATACTGCCACTACAGGATTAAGTTTCCAACATGAACTTTGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCGCCGTTACAAATTAGTGAAATAATGTAGTACTTTCTCCCACAACTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTATATTTGTTAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTCTCTGTAATTATAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACAGTAGTCCTCATAACATCTCAGTAGATTCTTGGAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTATTCTGTAGATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATTATCACCAGATGAGGAGAAACAGGGTTTTGCTTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCATATTCACCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGGTGCATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTGTAAAGTATTGACAGTAATATTATAATAAAATGTCATCACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTGCCCAAGGCTTTGACTCTAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGGTATAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCCGCGCCTCATCCTATTTTCCTGTTGCTTGCTCTAGAACTCACCATCTGGTATCCAGAGTTAGGTATTGTCTTCATATTGCCTTTTCAGTGTAGAATCACCCTGTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCGGCCATCCCTTCACAACAATTAGGACTTTCACCGTTTTTAGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAGTGCTGACATTTCTGCAAACATGTGATTTTTTAAATGTATTTCATTGCAAGAATCTGGCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGAAGTTTAAAATATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTAACCAGCAATACGTAGT 3: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.319873, "nblock" : 12818, "sequence_length" : 4612, "blocks_per_base" : 2.779271, "nsample" : 64395, "trim" : [ 200, 64290 ] } +4: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCATGGTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGTATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTCACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCAAAATATATATTGAATAAAACAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTAATGTGTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAATGAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTGCAAGCATGGGGAACCACCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGGGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGTTCCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC +4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.179309, "nblock" : 12818, "sequence_length" : 4723, "blocks_per_base" : 2.713953, "nsample" : 64395, "trim" : [ 200, 64290 ] } +5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC +5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } 3: CTTCCGTTCGAGTTACGTGTTATCTTTGCCTGCAATCCATCTATCTTCGGCGTCTGCTTGGGTGACATACCCATGGAAACTATAATTTTTTTAACAATTGGAAATTCTTCAGTTTTTATATTTAACAGTTTTTGATTTTCTAACTGTGAAAATATATGGACCTGATTAGTTTTGTATATTTGCGCAATATTGGCTAACAATATTTTTCTGAATTTACTTACTAATTCTCCAGCATAGATTCTTATGGGACTGTCATATATTAATCATGCGATTATGAATATGTGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTGCTTTATTGTCCTGGCTGGAATATTTCGCACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTTAGTATTTCAACAGGTTTTTGGGAACTGGTGATGTTTGATTACATGGAATCACGGTTCTTTACTGGTGATTTGACATTTTGTTACCATCACCTGAACTTGGTATTATCCAGTGATTGTAGTCTTTTATCCATATCCTCCTCACCCGTTTCCCCAGTCCTCAAGTCCGTTAGCATCATTTGCCACCTTTTGCATCCTCATACTGATGAAGATGATGTTTGTTTCATTCCTGAGTTACTTCGCGAATGTGATCTCCATTCCATTCAAATTGCTGAAAATGCATTATTTCGTTCCTTTTTGTGGCTGGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTGATGGGCATTTGACTGGTTTTCATATTTTTTCCAATTGCAAATTGGTGCTGCTATAAACGCCATTTTGGCACTGTACATTACGTATCTATTTCGTATAATGGCTTCTTCTGGGCCAAGGTAGGTCTAAGATCTGCTTTTAGTTCTTTAAAGATCTCCTTTACGGCTAATGGTTATACTGGATTTACATTCCATCAACATTGTTAGGTGTTTTCCTTTTCACCAGTCACAACATCTGTGTTTTGATTTTTTTATTAGGGGCCATTCTTTCAGGGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTTTAATAGGTTTGAGGCCATTTATATCTTCTTTGAAATTGTCTATTCATGTCCTTAACTTTTTGATAGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAATTTTCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTAGTTGGGTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCAGAAGTCTTTTACTAACCCAATGTCGAGGTTTTTTTCAACGTTATCTTCTAGAATTTTTTTACCGGGTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTGGATCCAGTTTCATTCTTCGACATGGCAGGTTTGAGTGATGTCATTTGTTGGTCGGGTCCTTTCCCCACTTCATATTTTGTTTGTTTGTTGAGATCTTGAGATTGGCTGTACGTGTTTAGCTTTATCTCTTGGTTCTCTATTCTCTTCATTGGTCTTATGCCTGTTTTTTATACCAGTACCATGCTGTTTTTGCTGATGGTGGCCATTATAGTTTGAAGTCAAATGTAATTACCTCAATTTGTTCTTTACTTAATCTTTACTTTGGCTGGGGCCTCTTTTTGGTTCCATACCGATTTTAGGATTGTTTTTCTCATTCTGTAGAATATTAGGTAGTATTTTTGATGAGTGCATTAGATTTGTAGGTACTTTTGGCGTATATGGTCATTTCTATGTGATTTACTCATCATGAGAATGGATGTATTTCCATTTGTTGTGTATGATTTCTTTTTTTCAGCAGTGTTTTGTTGTTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAGTATAGTCAAATATATATATATATATATATATTTACGCTAATATAAAGTTGGGGATTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGGCTATAGCGGGCTACTGATTTGTGTACATTAATTTTGTATCTAGGCTTTGCTGGAATTCATTTTAACAGTTCAGGAACTTTTAGTTTGGAGTCTTTTGGGTTTCTAGGTATACGATCATATCATCAGCAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTACTCTGGCTGGGACTTTATGTTGAAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCCGCACGGGAAATGCTTTCTTTTTCCATTAAATGTCTAATGTTGTTGGCTGTAGGTTTTGTATCACAGGTGGTTTTTATTACCTTAAACGCCTTCTACGTAGATTTTACTGGGGACTTTAATCATAAAAGGATTACTGGATTTTTTTTGTCAAATATTTTTTTCTGTGTTTGTAGAGATGATCATGTGATTCTTATTTTTAATTCTGTTTTTATATTTATATCATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCCTAGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTAATACGTGGATTTGGATTCAGTTAGCTAAGTATTTTTATTGAGATTTTTGCATCGTTAATCAGTGATGGGTCTCAGTTTTATTTTTTTGTTATAATGTCCTTTCCTGGTTTTGATATTACAGTGATGCAGCTTCATTGGATGATTTAGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGGATTGGTACCAATTTTTCTTTGAATACCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAAACTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGTTGTATCTTTCAAGAATTTATCTCCTCTGAGTTTTTCGTTTATATTACGCCCACAGAGTGTCATAGTAGCCTCCGTGATCTTTTGTATTTCTGTATGCTGAATTTGTAATATCTCCCATTTCATTTTAAGTAAACTTATTTGGATCTTCTCTTTTTTTTTTTTCTTGGTTAATCTTACTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTGTTTATCTTTTTTTTTTTTTGTATATTTTTGTTTCAATTCCGGCTTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTCTGCTGGGTTTAGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGTGTGACCTTAGATTGTCTATTTATTACTTTTTCAGGGCTTTAGATGTAGGTTAATATTCTCGATTTCTATTATGTAGGTATAATGCTATAGAGATTCCTATTCTGGTGTATTTCGAGATTTGTTTTCAGATTTGGGGAGCTCCTTTGCTTGGTTTTGTAGTACTCAGTATTTGTCTGAAAAATACTATCTTCCTTCATTTATAAACTTAGTTTCCTGGATACAAATTCTTGGCTATTTGTTTAGTTTAAAGACTACCGGTAGGACCCCAATCCACTTGTCTTTGCTGTATCCCAGTTTTGATAGGTTGTGTCCTACTATTGTTCAGTTGAGATTTTTTATTTCTATCTGGTTCATTGTTCACCCAATGATTTTTTCAGGATTGTTAATTTGATGTATTTGCAATGTCTTTGAAATTTCTTTTAGAGGTTGGTTCAATCTTAATTCCTATAGTCTGACATAGTACTTGTCATTTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTAGCCTATATATATTTCTATATTAGAGGAATGTTCCATGTGCTGATGAATAAGTCTTATGTTTATTTGTTATTGCGTCTTCTCCCTTATCCCTGTAAATCCGTTGTTGTAAGGAGTGTAGTTTAAAGTACATTGTTTTTCTTTGTTAACTTTTCTATCTTGATGATCTGTATCTAGTGCTGTCATTAGATGCTAAGTCCCTATTGCTGTGTTACCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTGGGGCGCTCAGTATTAGGCACCCATGTTTAGGATTGTGATATTTTTCGTTCGTCCTTTTATCATTATAATGTCTCTCTTTGTATTTTTTACCGGCTGTTGCTTCGTTTGTTTTGTCTGATACAGAATAGTTATTCCTGCTTGCTTTTTAGTGTCCATTGCATGGGATATCTTTCTACCTTTACCGTATATGAGTCCTTAGTATTGGTGAGTCTAGTAGAGACAGTAGATACTTAGTTAGGTAATTCTCCATTCTGCCATTCTGTATCTTTTTAGGTGGAGCGTAGGCCATTTATTCAGTGTTAGTATTGAGATGGTACTATTCTATTCATCGCGATATTTGGTGCCTAGATACCTTGGTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGAGGATTAAACGCAAAAACGGAACGCCGAA 3: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.590575, "nblock" : 5778, "sequence_length" : 2399, "blocks_per_base" : 2.408504, "nsample" : 29150, "trim" : [ 200, 29090 ] } 3: TCGGTGCGCATTCAAGCCAACCCTACCTCCTTCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTCGCGCCCCTTCCGCTTGAATCGCCTTCACTAAGTATGTTGGTCCCACATGATAATTCGTAGATTGCATCGACTCCGTTTCCGAATGAACGTGGATCGGCATTTCAGTAGTAGGCTGGGGCGGATGGAAAAATCAGCGTGCCCTCTCCACAATCGATCATCCGTTTGTCGGCCGGTACGGTAGGACCAGTCGAACTACTCAACCATTACCTAGATGAGGAATCCGTTGATTTTGCATCGTTGGGATCAGTTGGTAAATTCAATAGAATAGTTGTCCTAGACAGGTTGATGGATGGGAGAACAAAGCGGGGCCATGGGCGGGATAATGGGCGGTTGGAAATGGGATACAGCTCCATTCAGCCCTACACTTCCATTCCTCGTATGCTACGATGAATCAGGCCATGCATATCGCTTTTATTGGCCATCAGTATAATTCCAGCCTACCGATATCGATCCATCCTAATTAAGTAGGTGGCTCTCAATGGATCAAGAGATTTAAACATCACAGGTAGGATGATCGTCAGGACTCAGACCTTCAGGAATAATCATGCGCCACCTCCTTTCACATGTCATTCAGTGTGGTATGGTAGGGTAAAATCACCTTCATTCGTACTTGCCTTCAGGCGATTTCAGATAGGTTTGAAACGAATCTGTTGGTATCGGACGAAAATTGGATCAACATACATCAGTAAACTGCATTCCGCTCGACATAGCTCTGGACTTTAGCATAGATACATTAGGCTGGCATGAATTGTGGGAGGAGCCCTCGGAATGGACTTGTCTGGGAGAATTTGAGATCCTAAAAGTGAGATGGCACTACTCTACTCCTCGTCGATGGATCCGCTTGTACAATACAATCCAATTTCTAGATGAATGAAATAGTAGGTGGTTGTGGGCCAGCATGGAGCAGGACCCTTCACTACAGCCACCTCCGATGCGGGGTTCATTGAGGTGCATTCTGCGTGCCTCTGTCGTGCAGGTACCTTAATAAGCCGGGAGGCATTTCAAAGCTGAATCAGGAGGTAAAAATGAGTAGGATTTTAAGCCGCCGAATGGGAAGAACATCCTCTCGTTACCGGCGCAGAATGCACTTCCTGCCGGCCAGGCCAGTCAAAATGTACGCCAGCCAGGAATCAGGAATAAAGACTCAGTCAGTGAACGGCGAGCCCGCGCTGTGCTTCCGCCACAGTGGTAGAAAAACGTCCAGGATCAAATTACGTATTTCAATTCCGTGGAACAATTTGAAAGGCTAAAGCCTAGTAAAATTCAACTGGACGGACAGAGCCCGGAAAAAGCCTCCCTACCCCACTTCAAAGCGGAATGAACGCGGGCTCAAACCCTACAAAATCGCGTATTAAGTAACATTTCGCCCGTACTACACTATCAATCAGCCATTACCTCCGTAAAATACCAAATAGGTGAGAAAATTTGCATCCGCCATCGTACAGCCATCAAATTAGCCCACTCAAAATGGAATTTTGGATGAAAAAGGTATCATTCGACTCACCCCCTTACTTAATATTACGCTGCTCGCGTAAATATTTCCCTTTATACCATCCCAATGCATGCCCAATGCTTAGCATCATGTATTTCGACTCAACACCCACCATGCGCGATGGCGTAAATATAGAAACCAGATACGAGATTTCAGGCATGCCACGCCAGCGGTCAGTATAAACCGGGCAAAATCAAATAGCCGCCAGGCTCCGGACGGTGAGGCGAGATACCGGGTAGATGGGCTGGCGCGCTACATACTCCCAGAAATAGGGCATGGAAGCGCTCCATCGGCGCGATACCAAGATGGGCCGGCACCACTTCACGCCAGCATCTAAATTTTGCCTCGATAAAAGAAATCGTCCCCGACGGTACCGACCCATGAACAGGCATTTTGTTGCCCCGTCGCGCTTGCCACCCATTCCAAAATAGGTGGCGCCAGTACGAAGCGGGCTGAGCTAAACGCGCGCACCGCTCAATGAATCGCATCATCAGCCTTCATCCTCGTACCAGATACCATGGCCTCCTCCACAGCCCGAAAATAGCAAATATCCCTTCAATATGCGCTGATGGGCTGGAAACAGTATGAATAGGCGGGCGGGCCAATGGAATGGCTATCAACAGCCAGCGAATGAACCGCTTCCAATAGGTAGAGCTAAATGCGCGGAGAAATTTGGCCTCCCGTACCGGCCAAACCTAATCAAAATTCTCCTTCGACGGGCAGCTACAGGCGAACAGCGCCAGTGAAAAACATGCGGAGCGGATGGGGTCCGTATCGCTTCGACGAAACTGCCTCCAGCAGGAAAATCAGCTGTCTCATGAAGCGGTGCGCATGAAA - 2/19 Test #3: test_raw_call .................... Passed 25.38 sec + 2/19 Test #3: test_raw_call .................... Passed 26.04 sec +test 7 + Start 7: test_rawrnnrf_r94_call + +7: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "raw" "--model" "rnnrf_r94" "--threads" "1" "/build/reproducible-path/scrappie-1.4.2/reads" +7: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain +7: Test timeout computed to be: 10000000 +4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } +4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG + 3/19 Test #4: test_rawrgrgr_r94_call ........... Passed 27.38 sec test 8 Start 8: test_event_table @@ -316286,15 +316330,13 @@ 8: 12394 64075 0.000000 0.000000 1072576662 8: 12395 64078 -2.000000 -0.000000 1073238564 8: 12396 64083 0.000000 -2.000000 1072952450 - 3/19 Test #8: test_event_table ................. Passed 0.14 sec + 4/19 Test #8: test_event_table ................. Passed 0.19 sec test 9 Start 9: test_mappy 9: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "mappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" 9: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain 9: Test timeout computed to be: 10000000 -4: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCATGGTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGAAATAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGTATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTCACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCAAAATATATATTGAATAAAACAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTAATGTGTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAATGAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGAGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTGCAAGCATGGGGAACCACCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGGGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGTTCCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGACCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC -4: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.179309, "nblock" : 12818, "sequence_length" : 4723, "blocks_per_base" : 2.713953, "nsample" : 64395, "trim" : [ 200, 64290 ] } 9: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa (score = nan) 9: idx signal pos base current sd dwell 9: 0 182.803436 0 C 0.041604 0.315691 0.652851 @@ -380692,19 +380734,17 @@ 9: 64392 59.267578 0 C 0.041604 0.315691 0.652851 9: 64393 58.711945 0 C 0.041604 0.315691 0.652851 9: 64394 57.415466 0 C 0.041604 0.315691 0.652851 - 4/19 Test #9: test_mappy ....................... Passed 0.89 sec + 5/19 Test #9: test_mappy ....................... Passed 0.58 sec test 10 Start 10: test_seqmappy 10: Test command: /build/reproducible-path/scrappie-1.4.2/build_plain/scrappie "seqmappy" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa" "/build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5" 10: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain 10: Test timeout computed to be: 10000000 -5: GTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGAAGAGCTGAGGCAGGAGAATCCTTAAACCCGGGGAGGGCCCAGGGTTGAAGTGAGCCGAGGAATCTCACCTCATTGCACTCCAGCCTGCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAGAGTATTATTAAAAAATCAAGTTTCCCGTAATTATTTTAGAAAATGTAGACTATAATTTCCTCCAAAGAATAGATAATGTCTTTTTACTGTTATTTGTTCTCTTCGAGTACCTCCATGGTTTTCAGCATTTGAAGTAGGTATCTAATGAAAGCGTTCATTTAAGAGAATGTCAGTACAAAACTATTTGTAGTAACTAGACCAGAGAGAGACCTTTGACAATATTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATCTGCATTTATGCAGCATCAGTGAGTATACATAGTTCAAGTAGTCTATAAGTTTTTCCCTAAGAATGAGACCATGAAATTCCTTTTAATCTTTTTGATTGCTTAATGCTTTATTTCCTTAGCATTAAAATGTATAAGTGAAGAAGTTGTGGCATCGCAGGGGAGATAAAGAGTCTTTAAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGGAAATCACTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAATATATAATTTATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTCACTTTTCGTACAACTTTCTCACAAGGATTGATAGTGTTTATTTTCTATTTTTGTATATGTGCAGCCTCATATTATTTTGTCTTTTCTCGTTAGGAAACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAAACGTTGTTGAAAGCTTTGAGGTAGAATAAAAATATTAAATATTTCTTTTTAGTGTGTATAATGTTGGTACTGATGGTGTGAATCTCCTGGAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGGTCTACTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTTAGTAAATCACATCAATAAACAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGCTGAGTTTTTCATTCATTGTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCAGCAGCTGGCTAGGCCATGCAAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCTGTCTGCAGTACATAGTGCGTAGTAAGCACTCAATAGCCAGCGTACTGTATTGATGAGTATTGCCATACTCACTCATATCTAAACCAGAGATGGGCAGTCTCTTTTCTTGGGGCCGGATAACGAACATTTTGTGCTTATGGACAGCCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAAGAAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTGTGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTACTCACTCTTCCTGTTGCTTTGGCAGATGCTTCCCATTTATTTTGCCAGGTTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAGGCTGTATCAGATGCCCCCCTGTTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGGTTACGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAGTATCCCCAGCACCAAGCATTACTTGGCATGTATTAACTTGTGGATTTCAGCTATTAGGTTGTAGCCAGATTTCGAGCTTTTGATCTCAAGATCAGCTGTGCATTTCAAAAACACATATGCCTGGGCTATATATGGACTTCAGAATCTGAGTGTACAAGGTCTTGGTGGGCATTTGCATTTCAGAACCCCCTGAATAAGAAGTGCCCCCCAAAATATATATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTTATCACACTGTAGTTTCTGCTGTTACTTAATCAGTGTAATATATGATTATTGTTACTAAACTACTGATACAGGACTCAGACGAAGGCACTTAGAATATAACTGCCTTTAAAAGTCATGGATGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGGAGTAGAGAAAGTGAGTTAGCAAATGCTGTTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAAGAGAAAGAAAAAGCCTCCTTGTGGATAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTAGTATTTGTACCAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTGTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTAAATAGAGGGCTTCTAGTTTTTTTGTTTGTTTTGTTGTTTTTAAGTAAGGGGTCTTGCTCTGTGTGCTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCGCCAGGCCTGTCTAATTTTTTTACTTTTTAAGACAGAGAGAGTCTCACTGTGTTCCCAGGCTGATCTTGTGAACTCCGGTCAAAATGGTCACACTCCCACCCATCCTAGAAACACTGGGATTACAGGCGGGAGCCTTATGCCTAGCAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAAATTCTTTTTTTTTTTTTTTTGACTTAGTAAACGTTTAAATTTAAAGTTATAAGTGTAGAGAGAATTCCTATTAAGATTTTTAACATTCAAATATGCTTGATTTCTTTTTCTTTTTTTTTTTTTTAATAGTGACAGAGGGTCTCGCGCTATACCTGTTGCCCAGGCTGGTCCTGGAACTCCTGACCCAAAGCCTTGGGATTACAGACATAGATGATCCACCATGCCTGGCTGATTTCTTTATAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGAATTTCCATAAGAAGAAATGGCAAGCTGAAAGAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATGGGAATCACTAAGGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGAGGTGTAGCCTTAGAGAGGGCTGTCCAGCTTCCCAGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCCAGTGGCTTCTCCATCCAGAGACAGAAATAAGAGAGTCCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTTAGAGAAAGGCAAATGGAACTATCCAGCACACAGCCATTATTGTGTTTGTGTGTTTTTCTTCTTTACTTACAGTGTTTTTTGGTTTTTCGTTTTCAGCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAGAATTGAATCATCTTAGTTCTTCAGGATGGATGTGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCAGCTTGTTTAAACAAATGAAAAAAACCACAGCTGAAAATCTTAAAGATCAGGCTGTATATATATGAAGTATTCATTTGATTAGATCATCCTCTTATCTTGAAAGGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAGATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCAATACAGCTTCATGAGGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGAGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTAGTTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATAGGTTAGGCAGATTGTGGAAGGTCTAAAGAAAACTATACTGGAAACACTTCATTTTAATTTCTTAGGAGTGGATGGAGATAAGTAAAGACTTTAGGTAACAAATATGCCTGTAGTTACTCCTGGAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAGGAACTGGATAGTTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGCAGGGGAGGCCTCAGGGGAAACTTATAATCTGGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCCTTATAAAAATCGTCAGATCAGATGTAGGCTCACTATCACAAGAACAGCTTTTTGCAAGCATGGGGAACCACCCCCCCAAGATTCGACCCCTTACCTCCCACCTGGTCTCTCTCCCTTACCTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATAGGACGAGAAGCCCTGACCACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTTCACATTTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCCAAAGTCTTGCTCATTTCCAGCAATTAGCCCAAAGTCCAAGTCCAAGTCACTCATCTGAGATAAGGCCAAAAGTCCCTTCCATCTATGAGCCTATAAAAATCAAAGAAGTAAGTTAGATTCTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCCAAACAAGGGGCTGTAGGCCCCAAGAAAGTCTGCAATCCAACTAGGGCAGTCATTAAACTTTAAAGGGGAGTTCAAATGATCTCCTTTATGACTCCAGCCCTCGCACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGTGGCTCCATGCCTCACATCCAGCCCACTGATGCCAAGAGTGGGCTCCATGGCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCGCCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGGCCCGAATCCTGCCATTCTGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTAGGCCCAGTGCCCCGAGTGGGGACTGTAGGGGGTCCAGCTACCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCACTGAGGCCTGCCTACAGCCAGCTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAGCAATTAATTCTTGATTGCTGCAATGCACCTGACCCCCACATGTAAGCCGCCAAGGCTTGGGAACTTGCACTCTCCTGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGAGACTGCCAAGCAGCAAGGCCCTGGCCCACAAAACCATTTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACGGAGACATTTCCCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGAATTTCTACTCCCAGAAATGGGTTTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGTAGAAATTTCTTCCACCAGATACCCTCGTCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAGGAATACTTACCCTTCTCTTTGCTAGAGCATGGCAAAGAGTCACTTTTATTCTAATCCCCCAGGTGGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTGAGCCTCCATCCTGTTTCCAACCTGCCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTGGAGGTTAGGAAGTCAAGGTTGAGGTCCTACATCCTGGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAAGGAGGATGAGAGTGAGAGCAAGGGTGGCAGAAGTCCTTTTATAATAAAACCCATTCTCAATAACCCCTCCCTTGGTAACAATATTGAATTGTTCATTCATGAGGGATGAGAGCCCTTATATGACTTAATCATCTTTTAGTAAGCTTCTCTTCCAATACTGCCACACTACAGGATTAAGTTCCCAACACATGAACTTTGGGGGACATAGTCAAATCCTTGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTGTTTGTTTTTTGTTTTTTAAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAAATTGGTAAGAAATAATGTGAAGTACTTTCTCCCACCTTAATCAATGGATTGTGGGTGTAAAGTTTTTCATTTTGCTGTATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTCATAGTAAAATCAGTTGGTGATTTGTGCTTATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCTGCTACTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTGAGGCCAGACTTTAAAATCTCTACTGAAAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTGTATTTCAGTTTACTCTTGTATTTGGCTTCACCGCAAAAGTACGTAAGTCCTCATAACATCTCAGTAGATTCTTGGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCCAACAATATTAAGCGAAAGGGTTACTAATTGATTCTACTGTGAATGTCATGGCCCAATAAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAACCACTTATTCACCCGTATTCATAAAGGGAATAAAGATTTAGTTTGAGCAAAACAATACTATTCAATATATTCAGTTAATAATTAATTTCAATTTTATTGGTTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTTGTAAGTGCTTTGGTATAAGCAGTTTATACCTACCTAATTTTATGTTTATGCCAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAGCATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGAGGCCACTGAAATTACTGTGGTGCCCAAGGCTGACTCCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGAGAGGTATAGAGAAGGGACTGGGATAATAAGTGTAGCTATTGGTGGCCTATTCTGGAAGTTAACCTCACACAGTCTTACTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCGAGATCTATCTTCTTTGGTGGAATGTCTACTCATTTCCCTATTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCGCATACTCATCCTATTTTCCTGTTGCTTGCTCTAAGAACTCACCATCTGTTATCCAGAGTGCGTGTTATTGTCTTCCTGCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCGCCTTATGCCCCAGTAATGGGTGATCATGCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAAGATTTAGAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTTTGACATTTCTGCAAACATGCTTGATTTTTTAAATGTATTTCATTTGCAAGAGGAAAATCTAGCCAAAAGCATTTCTCATTTTTTTTATGTAAGTATTTATCTAGTAAAGGGGAAGTTTAAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCAGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAATTGGCTCAGCAATACGTAAC -5: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.168864, "nblock" : 12818, "sequence_length" : 4746, "blocks_per_base" : 2.700801, "nsample" : 64395, "trim" : [ 200, 64290 ] } -4: ATGAAACTATAATTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTATTTTCTAACTGTGAAAATATACTTGGACTGATTAGTTTTGTATATTTGCATATTATTTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAATTTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGAGATGATGTTTGGTTTTCATTCCTGGGGGTTACTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGCTGCTATAAACATATTTATTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -4: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.611628, "nblock" : 5778, "sequence_length" : 2439, "blocks_per_base" : 2.369004, "nsample" : 29150, "trim" : [ 200, 29090 ] } -4: CTCAGTGCGCATTCAGCCAACCCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGCCAGGGCCAGTATTACGCTCCATTCAGCCTACACCATTACCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCGTCCATCATTAGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCGATAACATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTACCGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAGTGGAATCAACGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTACCGCCTCGTCGGTGAATCCCGCGCCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGACTTCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGGTGAGTTTTATGGCCGCCGAATGGGAAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCAATCAATATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGACGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGTAGATGGGCGTCAGGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGAACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTCATCAGGCGGGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCGAATCGGTATTTCCATCTCATGAGGCGGGTGAAATG - 5/19 Test #4: test_rawrgrgr_r94_call ........... Passed 31.39 sec +5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA +5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } +5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG + 6/19 Test #5: test_rawrgrgr_r941_call .......... Passed 31.03 sec test 11 Start 11: test_squiggle_r94 @@ -385850,7 +385890,7 @@ 11: 603 G -0.348534 0.163240 9.530733 11: 604 C 0.161046 0.266937 15.063381 11: 605 T 0.194787 0.502125 16.019987 - 6/19 Test #11: test_squiggle_r94 ................ Passed 0.80 sec + 7/19 Test #11: test_squiggle_r94 ................ Passed 0.45 sec test 12 Start 12: test_squiggle_r10 @@ -390996,7 +391036,7 @@ 12: 603 G -0.572062 0.335164 12.230327 12: 604 C 0.561030 0.467363 9.792212 12: 605 T -0.235200 0.581865 6.671799 - 7/19 Test #12: test_squiggle_r10 ................ Passed 0.89 sec + 8/19 Test #12: test_squiggle_r10 ................ Passed 0.61 sec test 13 Start 13: test_licence @@ -391014,7 +391054,7 @@ 13: The vectorised math functions 'src/sse_mathfun.h' are from 13: http://gruntthepeon.free.fr/ssemath/ and the original version of this file is 13: under the 'zlib' licence. See the top of 'src/sse_mathfun.h' for details. - 8/19 Test #13: test_licence ..................... Passed 0.03 sec + 9/19 Test #13: test_licence ..................... Passed 0.06 sec test 14 Start 14: test_help @@ -391045,7 +391085,7 @@ 14: such, may change drastically between releases and breaks backwards 14: compatibility. Newer versions may drop support of current features or change their 14: behaviour. - 9/19 Test #14: test_help ........................ Passed 0.03 sec +10/19 Test #14: test_help ........................ Passed 0.06 sec test 15 Start 15: test_help_events @@ -391086,7 +391126,7 @@ 15: for any corresponding short options. 15: 15: Report bugs to . -10/19 Test #15: test_help_events ................. Passed 0.03 sec +11/19 Test #15: test_help_events ................. Passed 0.05 sec test 16 Start 16: test_help_event_table @@ -391110,7 +391150,7 @@ 16: for any corresponding short options. 16: 16: Report bugs to . -11/19 Test #16: test_help_event_table ............ Passed 0.05 sec +12/19 Test #16: test_help_event_table ............ Passed 0.06 sec test 17 Start 17: test_help_raw @@ -391154,7 +391194,7 @@ 17: for any corresponding short options. 17: 17: Report bugs to . -12/19 Test #17: test_help_raw .................... Passed 0.03 sec +13/19 Test #17: test_help_raw .................... Passed 0.04 sec test 18 Start 18: test_help_squiggle @@ -391179,7 +391219,7 @@ 18: for any corresponding short options. 18: 18: Report bugs to . -13/19 Test #18: test_help_squiggle ............... Passed 0.04 sec +14/19 Test #18: test_help_squiggle ............... Passed 0.04 sec test 19 Start 19: test_version @@ -391187,11 +391227,7 @@ 19: Working Directory: /build/reproducible-path/scrappie-1.4.2/build_plain 19: Test timeout computed to be: 10000000 19: scrappie 1.4.0- -14/19 Test #19: test_version ..................... Passed 0.04 sec -5: ATGAAACTATAATTTTTTTAACAATTGGAAAATTCTTCAGTTTTTTATGTACAACAATTTTTTATTTTCTAACTGTGAAAATATACTTGGACCTGATTAGTTTTGTATATTTGCATATTGGCTAGCAATATTTTTTAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTATATGTAATCATACGGTGTGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCCTTTTGCTTTATTGTCCTGGCGGCTGAATATTCTTGCTGTTGGATGGAAGGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAAAATTGCAAGATTTTCATATTTATTATTATTTTTTTAATTATTTCAACAGGTTTTTTGGGAACTGGTGATGTTTGTTACATGGAATAAGTTCTTTTACTGGTGATTTGACATTTTGTTGTACCTCATCACCTGAGCAGTGTGCACTGCTATCCAGTGGTGTGAGTCTTTTATCCCTTATCCTCCTCACCCGTTTCCCCCAAACCTCAAGTCCATTTAGCATCATTTATGCCTTTTGCATCCTCATATATACTGATGAAGAAGAGATGATGTTTGGTTTTCATTCTGGGGGTTGCTTCATAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGGGCTGGTTTTCATATTTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTTATTTTCTTCTGATACGTAATCTATTTCATTATAATGACTTCTTCTGGGCCCAAAGGTAGGTCTAAAAGATCTACTTTTAGTTCTTTAAAGGAATCTCCACACCATTTCACATTAATGGTTATACTAGTTTACGTTCCCATCAAACAATTAGGGTGTTTCCTTTTCACCAGTCACACCAGCATCTATTAATTTTGATTTTTTATTAGGGGCCGTTCTTTCCAGGAGTGAGGTGGTATCCCACTGTGGTTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATGGTACAGGCCATTTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTTCTCCTCTCCATCTCTGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCCTGACTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTCTTGGTCACTTGAAGTCTTTTGCCTAATAGCAATGTCTAGAAGGTTTTTCAACGTTATCTTCTAGAATTTTTTATAGGGTTTTCGCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCTTGGGTTTACCGAATTCCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCGTAGTTAACATGCAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAGTAATGTGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATAGAATTTTAGGATTGTTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGAGGTGCATTGAATTTGTAGATTGCTTTTGGCAGTATGTGGTCATTTTCACAATATTGATTTTACTCATCCATGAGGAATGGGATGTGTTTCCATTTGTTGTGTATGATTTCTTTTTTCAGCGGTGTTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTACAGCTAGTAATAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTGTTCATGTATACTTGGGAGGCTACTGATTTGTGTACATTAATTTTGTATCCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTTGGTTGAGTCTTTAGGGTTTTCCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGTAGGCGCCTTGTCTTTGTTCAGATCGCACGGGAAATGCTTTCTTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTGTCACAGGTGGTTTTAATACCTTAAGGCATATCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGGATGCTGGATTTTTTTGTCAAATATTTTTTCTGTGTTTATTGAGATGATCATGTGATTCTTGTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGGATTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTGTTATGTGTCCTTTCCTGGTTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAATTAATGACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCTAGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTTACCCAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTTAATTAGGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTGTTTATCTTTTGTATGTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTCTTTTTCTGCTGGGTTTGGGTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATGTAGGTATGTGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTTCAAGATTTAGAGCTCCTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCCTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCTTTGTCTTTGCTGTATCCCGGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAAAGAGATTTTTTACATTTCTATCCTGGTTCATTGTTCACCCAATGATTTTCAGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTGGGGTTGATTTCCAATCTTATTCCATATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTCATATGTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTGCGTTAGAATCTTCTCCACATATCACTGTAAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTTCCTGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTTGGTGTCCATTTGCATGGGATATCTTTTCTACCCCTTTACCTTAAGTATGTGAGTCATATGTATTGGAGTGAGTCTAGTAGAGACGGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTAAGTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATGCACCTTGGTTTTTTTTAAATCATTGCATTATTGTTTTATAGATCCTGTGAGGAGGTTAAACGCAAAGCAGACGCCGAGATAA -5: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.586425, "nblock" : 5778, "sequence_length" : 2501, "blocks_per_base" : 2.310276, "nsample" : 29150, "trim" : [ 200, 29090 ] } -5: CCCTCAGTGCGCATTCAGCCAACCACCTACCTCCTTCCAGTATACCAATCCAGCTAAGCGCCGGTAATGAATTACGCGCCCCCTTCCGCGGAATCACCCTTCACTAAAGCCTTCATTGAATCCCCACGCCAGCCAATGGCCAGGTACATCGGCTCCGATTTCCGAGAGCCGACATGGTCCAGCTAGTAAATGGCGGGAGGCCATTAAGGCAGATGAAAAAATCGCGACGTACCTCTCCCCAATGTCGATCATCGGTGCCAATGGCCGGTACGGCGAATGACGTCCATTTACTCGCCAATACCTGAATAAAGAATCGGTGATTTTACGCTTCGATGGGATCAGTGGGCCGTATAAACCGGGTATGGAACAGGTTGGCCCAATCGACCAGGAGAACAAAGCGGGAGCCGGCGCCGGCGGGATAAATGGAGGCGGATTTGCCGGAAAGCCAGGAGCCAGTATTACGCTCCATTCAGCCTACACCATTACCGGCATCACCAATCGATAGGCCATGCATATCGCTTTGTGTGCCATCAATATATTCCAGCGCCTACCAGCCTCCCGTCCAACTCTAATGGCCGTAACTCAGCCAGATCAAGGTACAGCATCACAGGCCAGATGATCAGGAATTTCGACCTTCCGGAATAGCATCATGCGCCACCTCGCTTCACATGCTCATTCAGTAATGGTATGCGGGGTAGCGTATCTTTGCCATCGACCGCCGCGCTTCGGCGCCCGGTTCGAATAGGGTAAGCTGGGCTCGGTATCAGACGAAAAAAAGTGGAATCCGCCCATCAATGCGCTGCATTCCCGCTCGGCCTGCTTTCTGGGCGGGAAAACTACCAACATAAATACATTAAATGGCATAAGGCGTGCCGGAGGGGCCTCGGAATGGAACTTGTCAGAAGGTAGGAATCCTAAAAGTAGACCAGCGCCTCACCGCCTACCTCGTCGGTGAATCCCGCCTGTCATACAGCTCACAATCCAGAAAATTTCGCGCATTCAATCCGGTAATACCGAATGGTAAATGGCCGATGGTGCTGAATTCGTTGGCGAACCAGCGCATGGAGCGAGACCCTTCACCAGACAACCTCCGATACGGGGCGGCTCAGTGAGGTACGAACTTCTGGCTGGCGTGCCTCATCGTACCGGTACCTTATCGCCGGAGGGCGTATTTCGGCTAGAATCGGAGAAAGAATTGCGTGAAGTGAGTTTTATGGCCGCCGAATGGGAAGCGAGAATTTCTCGTTACCGGCGCGGAATGAAGCCTTCCTGCCGGCCCCGGAATGATCGTAAATGTACATAATCCAGAATCGGTCGGAATAGTCAGTGTGGTGGCGGCGGCCCGCGCTGTGCTTCCGCCGTGGTGGCTGCGTCGGATCAATTATTTATCCTTCAATCAATGGGAATAGTGAGCTAAAAGCTTCAAATGCCGAAATCTTCAGACCGGACAGAAATGGAAAAGCCTCCTCGCCCGCTGAAGGCAGGGATGAACGCGGGGGCTCGAGTCCTACCAAAATCCCGTATTAATGGCATTTCAGCGCCCATCCCACTATCGATGTATTATTACCTCCGTAAAATGCCGCAAACCGGTGGCGGGAGAAACATCCATAAATCGGCCGTATCCGATGGCCTCAAAAATGGGTTTGGTTGAGGGCGGGAAAAGGTATCGTTCGACTCACCTTAGCAATATTCTATCGCGTAAATCAGCTTCCCTTCTCCACCATCCAGCTGTGCCACAATCTTAGCATCATCAGCAATTTCGATCAACCACCCTTCGGCCGTGCTGATGGCGTAAATATAACAAAATAGATGATTGAATTTCAGGCGAATGCCGCCAGCCCCGGTCAGTATCGTCGGGTGGAATCAGATGTATACGAATCGGACGGTGGGGCGGTCTACGGCCGGTGGAATGGTTGGCGTGGCGGCCATCTCCAGAATGGGCGTGGGCTGGCGCTCATCGGTAGATACCAAGATGGGTCCGACAGCTTCACGCCAGCATCAATTTTGCCTCGATCAAAAGAATCGATCCGACGTTGCCGACCATGAACAGATTTTGCGGTTGCCCCGTCGCCTTGCCATTCCAAAATGGTGGCCATCGGTGCGAGGCGGGCTGAAGACTAGAACGCCTTGCCGCTCAATCGAATCGCGTAAATCGACCTTCTACTTTCGTCTCGTACCCAGTCACCATGGCCTCATCTGGCCGAAATCAGCGATATCCTTCAATGGCGGCGTAGATGGAAAATGAGCAGTGAATGGTGGGCGGGCCAATGGAATGACTATCAATGGCGAATGACCTTCGAAATGGAGAGTGAGCCCTAAATGGGCGCGGAGAAAATTTGGCCTCCGGTACCGAGGCCGTCAAATAAATTTCATCAGGCGGGGCGGCTGGTGAACCGCATCGGTGAAAAACATGCATGGAGCGGATGGGGTCAGTATCGCGGCCGACGAGCTGCCTCCAGCCGAATCGGTGGCTGTCTCATGAGGCGGGTGCGCGTGAAATG -15/19 Test #5: test_rawrgrgr_r941_call .......... Passed 36.02 sec +15/19 Test #19: test_version ..................... Passed 0.04 sec 2: GTTACGTATTGCTCTTGCCTGTCTAAATACAAAATTAGCTGGGTGTGGTGGCACACACCTGTAATCCCCAGCTACTCTCAGGGAGCTGAGGGCAGGAGGAGATCCTTAAACCCAGGGCCAGGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAGTATTATTAAAATCGTTTCCGTAATTATTTTAAGAAATGTAGATATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTATTTCTCTTCGATTGCCTCATGGTTTCAGCATTTGAAGTGAGTGTCTAATGAAAGCGTTCATTTGAAGATAGTACAAAACTATTTGTAATTAACTAGACCAGAGAGACCTTTGACAATATTTTTTTTCTCTAAGCTGCTAGCCTAATGTACTGCAGAGGATCTTGCACATATGTATTCTGGGGAAATAAAATGCTATACAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTATAGGATTTTCCCTAAGAATGAGGACCTTGAAATTCCTTTTAATCTTTTGATTATGCTTTATTTCGCTTAGCATTAAAATGTATAGTGAAGGAAGTTGTGGCATCGCAGGGGAGATAGGAATCTTTAAGAAGGTAATATAAAATGGAGTATGAACAAATTGGAAATCACTGCTGAAGTTAGAAAATACTAGTTTGTACATATGTAAATTACCAACTGCGATAATAAAAAATATAAATATATAGTACATAATAAAATATGCCAAATATGTTACATACACACATTTTAATTTCATAACAAAGAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAGTGTGTTGATGCATCCACAATATGCTCATTGTTAGGAATTTGGATTGAATATTTCACTTTTCACATTACTGCTTTCTCACAAGGATTGATAGTGTTTTCTATTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGAGTATCATTTCAGCTTTCCATCCATTTTTTTATTTATGGACATACTGTAGTGGAAAGACCTATAAACACAAACGTTGTTGAAACTTAGAGGTAGAATAAAATATTAAATATTTCTTGCCCTTTTAGTGTATAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATAATATCTTTCTCCGCGGATGGTCTACTTTCTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCATTTTAGTAAATCATCAAATAAACTTAGTCTGTTGCCTTCACATTATTTAAAATCATGTCTCCATCTACCTTTAATCCTAGCCATTGCTGGATTTTCATTCATTGTTTTTTTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCTTGGCCTTAGGCCATGCAAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTAGGCTGAATTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTTAGTTCACCAGTTAGTGCTTTCTCCATCTGCAAAGTTGGCTCCTGTGCTCTGCAGTACATAGTGCGTAGTGGCCTCAATAGCCCAGCTGCTATTGATGAGTATTGCCATACTCACATTCATATCTAAACCAGAGATGGTGATCTCTTTCTTAAGGGCCGGATAACAGACATTTTGTGCTTGTGGACCACGTAGTTTCATCTCACCTGCTTGACTCTACTGTATTGTAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAAGCAACAGTATGTACAAAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGAGGATGCACGTTTAGGATAGCATACTGAACTGTAATACAGTTCCTGCTGTCTTACTTTCAAAATACATGGCACATATTGCTCCCTACTTGGAATGGCTTTCTACTCTCACTCTTCCTGTTGCTTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTGCCATACTCTACAAGGATCTTTCCTGATCCTCTAATTGTATCAGATGCCCCTGTTTTGCAACCTTAGCACCTGTCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTTGTGTTATGTTTCCCTGACTTCTGGGTGTGAGTTCTTAGAGTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTGGATTTCAATTAGGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTCCAAAAAAAACACATATGCCTGGGCCTATATGGACTTCAGTCTGAGTGGCTACAAGGTCTTGGTGGGCATTTGCATTTCTAGAACCCCTGAATGAAGTGCCCCAAAATGTATTGAATAAAAGCAATAAAACCCAGTAAGGAAGTTTCATGTTGGACTGTATTCCATTTTTTTTTATCACACTGTAGTTTCTACTTGTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGCTCAGACAGGCACTTAGAATATGCTTTGCTGGCTTTAAAAGTCATGGATGGTACAAATGCAAGCATGGGAACACTATTCACCAACAGAGATGTTGTGGTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTTGACACTGTTATTCAGAGAAAGAAAAGCCTCCTTGTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCGTGTATTTGTACCCAGAAGTGCCACAAGTTATCTTCTCAGAATGGAATCTGCTTTTGTGATCTTATTTTGAGGGGATAGACTGTAATGGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTTTTAAATAGAGGCCTCTAGTTTTTTTTTGTTTTGTTTTGTTGTTTTTTTAAATGGGGTCTTGCTCTATGTACTGCCCAGGTTGGAGTGCAGTGTTATGATCATAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTATAGATGTGCACCACCCAGGCCTGTCTAATTTTTTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGGCTGATCTTGAACTCCGGTCAAAGTAGTCACACTCCCACCCATCCTAAAGCACTGGGATTACAGGCAGGGAGCCTTATGCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTTTTTTTTTGACTTAGTAAGCGTTTGCATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTTTAACATTCAATATGCTTAATTTCTTTTTCTTTTTTTTTTTTTTTTAATAGTGACAGAGGTCTCTTTTCTCTGTTGCCAGGCAGTCCTATGAACTCCTGACCCAAAGCCTTGGGATTACACAGACACTGGTGTCTATGCCTGGCTGATTTCTTTATAAAAAATTCTTTATAGGAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAGAAACGAAGTGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCTCCAGGCCTGAAGGGACCATAGGGAAAGAAAGGAGCTGTTATTGGAACCAAACAAGAGGTTAGCCTTAGAGAGGGCTGTCCAACTTGATCTTTGGTAGAAGAGTATCCACTGCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACACCATTCTCCCTTAGTCTCCTGGCTGGTTTCTTTCAGTGGCTTCTCCATCCAGAGACAAATAAGAGTCCAGATGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGGTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTATTATGTTTTCTTCTTTACTTACAGTGTTTTGGTTTTTTTTCGTTTCAGCAGCTCCCACACATGTGTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTGAAATAACCTGTATGAAACATTTAATGACTTTGTTCCTTGTTTAGTAAGTAACCACAGCTGAAAATCTTAAAGATCAGGTATATATGAAGTAATTTCAGTTTGATTAGATCATCTCTTATCTTGAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAAGTCTCCTTATGTACAGTGCTCTGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTAATAGAAAGGTATGACACATACACATTACATGCAGAATATGATAGAAGTGATTGTCTGGATGCAAAATATTGACTGTGTGTCCAATACAGCTTCATGAGTATTAACATTGCCTTGAGACAGACCTAAATGAATCAGGTATTCTAGGAAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAAATAGTCTAGTTTTAGTGGGGTTATAAAGTATGACGGGAGAAAAAAGAAGACTGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAGAAAACTATACTAGAGCACTTCATTTAATTTCTTAGGGAGTGGATGGAAGTCAAGTAAAGACTTTAGGTAACAAATATGCCTGTGGACCTCTGGAGACATGTTAAAATGATCATCTTTGGAATTGAGTAAGAACACAGGAACTGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGGAAACTTATAATCCCAGCAGAAGGCAAGGGAAGCCAAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAAGAGCTCCCTTATAAAAAAATCGTCAGATCAGATGTAGACTCCCACTATCACAAGAACAGCAAGCATGGGGAGCCACCCCAAGATTCATTGCCACCTCCACCTGGTCTCTCTCCCTTACTTGACACATGGAGATTATGGAGATTACAGAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACACACACACCATTCCACACTTGGCCTCTCCCAAAATCTCATGTCGGTTTCACATTCCACAAAGTCAACTGTGGCTTCCCAATAGTCCCCAAAGTCTTGCTCATTTCCAGCTTAATTAGCCCAAAATCCAAGTCCAAAGTACTCATCTGAGATAAAGGCCAAAGATCCCTTCCATCTATGAGACTATAAAATCAAAGGAAGTAAATTAGATTGCTTTCTAAGATACAATGGAATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGAGAAATTGGCCCAAACAAGGGGCTGTAGGCCCCAGAAAGTCCTGACCAGCTAAGGCAGTCATTAAACTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACACATCCAGCCCACTGATGCAAGAGTGGGCTCCCCACAGCCTCATGCAGCTCTCGACCTCTGGCTCCATGCCTCACATCCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCAGCTCCACCTCTGTGTGGCTTTGCGGGGGGTACAGTTCTTACTCTCTGCTGTTTTCACAGGCTGGCGTTGAGCCTCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCCTGCCATTCTGGGGGGGGTCTGGAGGATGGTGGCCCTCTTCTCACTTAGCTCCCACTGAGCGGTGCCCCAGTGGGGACTGTAGGGGGTCCAACTACCCCACATTCCCCTTCTGTACTGCCCTAGTAAGGGTTCTCCACTGGGGCCTGCACCTACAGCCAGCTTCTGCCTGGACATCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAACGTTAATTCTTGATTGCTGTGCACCAGGCCCCACATATAAGCCGCCAAGGCTTAGAACTTACACTCTCTAGGAAGCCTGAGCTATACGCTGGCCCCTTTTAGCCATGAGTGGGGATGCAGGACGCAAGTTCCGAGACTGCCAAGCAGCAGGCCCTGGCCTAAAACTAATTTTTCCCTCTTAGGCCTCTGGGCTGTAATGGGATGGGCTGCCACGTGAAGACTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACCCATGCACATTTCTGCAGCTGGCTTGGATTTCTACTCCCAGAAATGGGTTTTTTTTTCTTTCTACCTCATGGTCCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTTAAATGTCTGGTTCCAGTTTTAGATAATCTCTTTGTATGAATGCATATGACTGGATATGCTTTCAGAATCAGCCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGGCAGAGGCAAGATACTACCCTTCTCTTTGCTAGAGCATAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGATACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAACCATCTAACAAGTCTCTAGGAAGTACCAAACTTTCCACTTCTTCCTGTCTTCTAGCCCTCCATCCTGTTCCAACACTACACCTATTACTCAGTTGCTATAGCAGACTACCAAGGACTGGGTAATTTATAAAGAAAAGACATTTATTTCTCACGGTTGGCTTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCACAGCAAGGGCTTTCTTGCTGCCTCCTCTCATGATGAAAGTAGAGTACAAGAGGATGAGAGTGAGAACAAAATTGGCAGAGTCCTTTTTTATAATAAACCATTCTCAATAACCCTCCTTGGTAACAATATTGAATTCATTCATGAGGAATGAGCCCTTAACCAGAGCAATCATCTTTTGGCTAAGCTTCTCTTCCAATACTGCCACACTACAAGTTAAAGTTTCCCAACACATGAACTTTGGGGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTTTTGTTTTGTTTTTTTTGTTTTTTCAGAGTTCTAGATAAAGCAAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTATATAGTTTCTTAGATTACAAATTGGTAAGAAATAATGTGATACACTTTCTCCCACCTTAATCAATGGATTGTGAGGGTGTAAGTTTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTGCATTTCTTTTATCAGTAAACTCAGTGTTTTTTTTTCATAGTAAAATCAGTTGGTGATTTGATAGCATTTATTCTTCAATTATTTTAGCTTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAAAGTTTTAGATGTTGCTAAAATAAATGTGAAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCATTTCCATCTTCTGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCACCAAAGTACGTAAGTCCTCACTTAACATCTCAGTAGATTCTTGGGAGTACAGCTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTTATAACATTGTTGAGGAAAAAAAAATTGGTTTCATTATATATTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTAATTCTACTGTGAATGTCATGGCCCAATAAGAAAAGGACAGGGGCGGACTTACTAGGCATTTTGTGTCAGGTGAAAGCCAAATAATATCACCCAGATGAGGAAACAGGGTTTTGCTAATAGTTTGAATAGGAAAATTGGTGAGGAAATAGCTGTAGTTGTTTCCAGGTGAGCTCACTTATTCACCCGTATTCATAAAGGAATAAAGATTTAGTTTGACAAAACAATACTATTCAATATATTCAGTTAATGTGAACATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGGAAGCATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTAACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTAACTGGCCATTTCTGCCTTTCAAAAAAATTAAATACATTACTCAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAAATTACTGTGTTGCCCAAAGGGCTTTGACTCCACAAGTTTACTTTTTTTAGTAATAGTTGAGGGACGAGGAGAGGTATAGAGAGGACACAGGATAATAAGTGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTGCAAGGACTCAAGATCTATCTTCTTTTAGTGGAATGTCTACTCATTTCAGCTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTCATACTCATCCTATTTTCCTGTTGCTTTGCTCTAGAACTCTGCATCTGTTATCCAGGAGTGCGTGTCTTCTTGCCTTTTCAGTGTAAGAATCACCCTGTTTTTTCCTCCTTATGCCCCAGTAATGGGTGATCAGCCATCCCTTCACAACAATTAGGACTTTTCACCGTTTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGTAATCTCAATGAACTGGAAAAGAGAATTGCTGACATTTCTGCAAACATGCTTGATTTTTTTAAATGTATTTCATTTGCAAGAAATCTGGCAAAAGCATTTCTCATTTTTTTTTATGTAAGTATTTTATCTGATAAAGGGGAAGTTTAAAAGTATGGTGGATATCATGTATACTGAAAGTACTTATCGGACGATGAATAGACAAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCATAGCAAAAAATTAACCAGCAATACGTA 2: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.175566, "nevent" : 12397, "sequence_length" : 4584, "events_per_base" : 2.704407 } 10: # /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 to /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fa -- score 11581.235352 over 12818 blocks (0.903513 per block) @@ -404014,30 +404050,30 @@ 10: 12815 -1 10: 12816 -1 10: 12817 -1 -16/19 Test #10: test_seqmappy .................... Passed 13.34 sec -6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 +16/19 Test #10: test_seqmappy .................... Passed 10.21 sec 2: ATTTTTTTAACAATTGGAAATTCAGTTTTTTGTATTTAACGAATTTTTTTATTTTCTAACTGTGAAAATATATTGGACGGTCGTTTTGTATATTTGGCATATTATTTGTAATATTTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCTGTATATTAATCATGCGATTATGAATAATGACGGTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTGCTTTATTGTCCTGGCTGAATATTCTTTACTGTTGGATGGAAGGATGTTAATGACATCAAATATCTTGTTAAGATCTCAATTGCAAGATTTTATATTGTATTATTTTTTTAGTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTCTTTACTGGTGATTTGACATTTTGTACCTGTCACCTGAGCAGTATTATCAGTGGTAGTCTTTTATCATATCATCTCTTGTTCCCCAAATTATCAAGTCCGTGCATCATTTATGCCTTTTGCATCCTCATATACTGATGAAGATGATGTTTGGTTTTCATTCTAGAGTTACTTCATGATAATGATCTCCAAATTCCATTCAAATTTGCTGAAAATGCATTATTTCGTTCCTTTTGTGGCTGGTAATATTCCATAGTGTGTGTGTGTGCCACTATATATATATATATCACATTTTTTTCTTTATTCACTCTTTGATTGTTGATGGGCATTTGAGCTGGTTTTCATATTTTTTCAGGTACAGAATTGCTGCTATAAACATTTATTTTCATTACGTAATCTATTTCGTATAATGACTATTCTGGGCCAAAGGTAGGTCTAAAAGATCTGCTTTTAGTTCTTTAAGATCTCCACACCTTTACATTAATGGTTATACTAGTTTACATTCCCATCAATATTCTTAAATTGTTTCCTTTTCACCAATCACCAACATCTATTGTTTTGATTTTTTTATTAGGGGCCGTTCTTTCAGGGTGAGTGGTATCCCACTGTGGTTTTTTGATTTACATTTCCCTGATCATTAGTGATGTTGGGCATTTTAATACAGGCCATTTATATCTTCTTTGGTGTCTATTCATGTCCTTAGCCAACTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCTGGATATCAATCCTTTGTCAGATGTATATATTAAGAAGGTTTTCTCCATCTCTGTCAGGTTGTCGTGACTCTACTGATTATTTCAGTTGCTGTACTGACTTTTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTCATTACATCTGCTTTTGGGTTTCTTGGTCGCGAAGTCTTTTGCCTAATAACCCAATGTCTCTAGAAGGTTTTCAACGTTATCTTCTAGAATTTTTTTATAGGGTTTCATCTTAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTTGTATAAGGTGAGGTGTTAGGGATCAGTTTCATTCTTCGACATGGCAGGTTACCAATTCAGTGTCATTTGTTGATAGGATATCCTTTCCCACTTCATATTTTGTTTGTTTGTTGAGGATCAGTTGGCTGTAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATGCCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGAGTATAGTTTGAAGTCAAATGTGATGCCTCCAATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGAATGATGGTGGTATTTTTTGATGAGGAATTGCATTAGTTGTAGGTACTTTTGGCAGTATGGTCATTTTCACAATATTGATTTACTCATCCATGAGATAGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAAATATATATATATATATATATATATTTGCAGCTAATGTAAAGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCGCCTTATACTTGAGGCTACTGATTTGTGTACATTAATTTTGTATCTGAAACTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTGGGTTTTCTAGGTATACGATCATATCATCCTTAAAGACTGGCGGATTTCACTTCCTCTTTACCGGTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCTGGCTAGGACTTTAATACTATGTTGAAGAGGTGATGAGCGGCACCTTGTCTTTGTTCGATCGCACGGGAAATGCTTTCTTTTCCATTAAATATAATGTTGTTGGCTGTGGGTTTTGTATCACAGGTGGTTTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGACTTTAATCATAAAGGATGCTGGATTTTTTGTCAAATATTTTTTTTCTGTGTTTGTGAGATGATCATGTGATTCTTGTTTTTTTAATTCTGTTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGGATTTTTTGCATCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTTTTGTTATATGTCCTTTCCTGGTTTTGATATTACAGTGATACTGCTTCATTGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAGCTAGGATTGGTACCAATTTTTTCTTTGAATGCCTGATAGAATTCAGCTGTGAATCCGTCTGGTCACAAACTATTTTTTTGTTTGGTAACATTTTGATTACTATTTCAATCACTGCTTGTTATTGGTCTGTTCAGGTTTCTATTTCTTCCTGGTTTTAATCTAGGAGGGTTGTATCTTTCCAGGAATTTATCTCCTCTAGGTTTTTCTAGTTTATGTGCATACAGGTGCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTGAGCTTATTTGGATCTTCTCTTTTTTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAAATAACCAGCTTTTTTTGTTTTATCTTTTGTATGTTTTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTTCTTTTTTTTCTGCTGGGTTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGGTGTGACCTTAGATTGTCTATTTGTAGCTTTTCAGACTTTTAGATGTAGGTATTTAATGTTATCAAGTTTCTATTTATGTAGGTAATGCTATGAGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCACAGAAAAAATACTATCTTCCCTTCATTTATATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTAGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCAGTTTTGATAGGTTGTGTCACTACTATTGTTGTTCAGTTGAAAGAATTTTTTTACATTTCTATCCTGATTTCATTGATGCCCAATGATTTTCTAGGAAGTTGTTAATTTTGATGTATTTGCAATGTCTTTTGAAGATTTCTTTTTTGGGGTTGATTTCCAATCTTAATTCCTGTAGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCTGTATATATTTCTATATTGGAGAATGTTCATGTGCTGATGAATAGAATGTATGTTTGCATTTGTTGAATCTTCTCCACATATCCTGTAAATCCGTTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCATTGGGTACTGAAGTCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATATAAATTTAGGGCTCCAGTATTAGGCTTACATGTTTAGGATTGTGATATTTTCCTGGATTCGTCCTTTTATCATTATAATGTCTCTCTTTGTGTTTTTTTACCGGCTGTTGCTTTAAGTTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTAGTGTCCATTTGCATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTAGTGAGTCTAGTAGAGACAGTAGATACTTGGTTAGTGAATTCTCCATTCTGCCATTCTGTATCTTTTTTAAGTGGAGCATTTAGGCCATTTACATTCAGTGTTAGTATTGAGATGAGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTTTTTTTAAATCATTGCATTATTGTTTTATAAGATCCTGTGAGAGGTTAAACGCAAAACAGACGCCGAAGACT 2: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.460068, "nevent" : 5787, "sequence_length" : 1698, "events_per_base" : 3.408127 } 2: CTCAGTGCATTAACCAACCTACCTTCAATGCTCCACCATCCAGCCTCGGTAATAATTACGCGCCCCTTCCCTTGAATCACCTTCACTAAAAGCCATGTTGAATCCCACAATGTAGGCCATCAGCTCAGGAAATAGAACATCAGCATGGGAGGTAGTAAGGCAGATGAAAAAATCATGCCTCTCATCAGTGCCAGTAGAATGACTCATTTCTCAATACCTAAAATAAAGAAATCGATGATTTACATGAGATCAGAATGGGCCGTAACAAACAGGTGCTCTGACAGGTGCCCAATCGATAGAGAACAAAGCAGGGAATAATGACTGGTTGACCAGAGCCAATCCTTCCATTCAACCCTACACTATTCCAATGATATTGTCACATATCACTTGTGTGCCATCAATATATTCAACACTTCTCCAATCCATATGGCCAACCAGATCAAAGGTGGCATCACAAGCCAAGGCCGGTGTCAGGAATTTCAGACCAAATATCATGCCTTCATCATTCAGTAGGTAGCGTATCTGCCGCTGTAAAATCAGACAAAGCCAGATCCGCCATAATGCTTCCTTCCACTCGGCCTCACTTCTCATCATTAAACCTCAGGCATGCCGAAATGGAACATGGAGCCCTAAAATGAATAGCCTCATCAGTGGGTAATCCCACTGTCATCTAATCAAAGGCCCCATACATTCATCAGAATAGAAATGGTGGTGGCATGGAACCCTTCTGAACAACATCTCAAATGCAGTGCTTCAATGAAGTAAACCTGCTCATAGGAGGCAGCTAAGCTAAAATCAGGAAAATTGCATGGTTACAAGCCCGCCGAAATGAATACAAAGCGCAAACCACTACCAGCCCCAGAATAATCAATAAATATACATAGCCAGAATCGAATAAGTCAGTATGACGCCGCGCTTCAATAGTAGCAATCAGATCAGCATTATTTATCCTTCAATCCAATAGGAAATTCCTTCAAATGCTAGACGGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAATGAGCTCAATCTCCATATTAATGCTTCATTGCCATCTCCACTATCATCCTTATTATTCTCAATAAAACCATAAACAAGTGAGGCCCATCCATAAATAAATGCAGCCATCCAGATAGCCTCAAAATAAGGCTGAGTATCATTCATTCACCCCTTGCCAATATTCTCATCCTTCCCTTCTCCATCCCAGCCATGCCATCTTAACATCGCTCAGCATTTTGATAGCGTAAATAGATAGGTCAATTTCAGAGCAGTCAAAATAAATAGGCTGGAAATCAAATGTGAGGCAGATGCCAGTGGAATGGTGGGCGCTCCATTGACACCACTTCCTCCAGCTCAATTTTCTCGATAAAAGAAATCGATCTGAACAATTTTGTTGCCCGTCGCTTATTCCAAATAGTGGCGCTGACTAAACACCGCTCAATGAATCATCATCAACCTTCTACTCGTACCAGATGCCTCATCAGCCAAAATCAAATATCCTTCAATAAGTGGGCAGTATGAATGGTGGGCCAATGGTACTATCAGCCAGAATGTTCTTCGAAAATAGTGACCTAAATGGAAAATTTGGCCTCGTACCAGTAAAATAAATTCTGACGAGCATCAGTGAAAAAAACATGTAGACGGATGGGTCGGCTGCCTCCAGCATTTCCATCTCATGAAGCGGGCGCATGAAA -17/19 Test #2: test_events_call ................. Passed 42.02 sec +17/19 Test #2: test_events_call ................. Passed 42.34 sec +6: scrappie: No basecall returned for /build/reproducible-path/scrappie-1.4.2/reads/MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 6: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.914597, "nblock" : 16158, "sequence_length" : 31, "blocks_per_base" : 521.225806, "nsample" : 81106, "trim" : [ 200, 80990 ] } 6: TCTGGTTTTTTATTATGTTTTATCTTCCATA 6: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.972209, "nblock" : 5778, "sequence_length" : 3087, "blocks_per_base" : 1.871720, "nsample" : 29150, "trim" : [ 200, 29090 ] } 6: GCTTCAGCATCTGCTGGGTCTTGTCTGCACATCGACAATGATTTCTGCCACTTTCAGCTTTTCACCGAATGTTTTTAGCCTTTTTCAGCCATAACCGCGATACTTTTTCCGTCAACGATAGTGGACACTTCCATAAAATCAACAGCTGCGGGGAAATCGTTGGTTTGAATCATGTTTCAGCAGATAAGCGAGGAATTTATCGGGAACAGAGGTCGCAGATAGCGACAACGTCTCTATTCCTTTGACTTCGCTGATGGACCAATACCAGTCGACCGATACAACCAGAACCGTTGATACCAACTTTGCTCATGGTTTTTTCTGAAACGTTGGATGAAATTGATCCCTTTCGCTTGAACCGGGATGGCGGGAATGACAATCTCCATTCGCATAAAACGTAACGTCTGGAAACGGGTAAACAATATTTTAATTGAAATTCAGAAAAAGCCCGTTTTAACAGAAAATTATGTTGCAAGCCAGAAATATTCTGGAAAATAAATATCAAGGTTACAAAATCAGCGTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTACGCGCAATGAATTGCGTGGTTTTGCCGCGTGCGCACGATCCAGCCACTGCATGAGCATCATTCTCGCGCTTTCCTCTGGCATCTCGATTTTTGTGCTGATGGTCATCGCCTCTTTTATGAGGCTGGATACCCGACCGCCAGTACCTCAACAGAACCGATGATGAGCGGGACTGGCGCGTTTGCGGAACGTGCGTGGTCGCCACCTCTATTGTTGCCGCTGCCGGTGACTGGTTTTGGTAACGGGCAACCCGTGGTTGCTGCTGGTTTGACGATGCCTTACGCTCAAGAGGCCGATTTTCGAACGGGTAAAGTCACTAAATACGTGGCATGGAAACGCTGGCGAATCTGGGATGTTCCTGTCATCAGGTTAGCGCTGCGCTGCGCCTGGCACGCCACTATTCTGGAAAGGCGAAAGGCCGCTTTTGCGCATGATGCGGCGTTTAAGCCATCCTGAAGGATATTTAAAGAAACGCCCTGTGGAATTCAAAGCCATAATTATAAAGGAGATACAGATCTGTCACGGAAACGCCTGTGCTGTACTGTGTGATGGATGAAACCGTAATCCTTGCCCGTTACGTCATCTGGCTTCTTGATCCGCATTACACCCGATCTTTAATACATCATAATATCAAAATAAACCAGCGTCTTAAGTAATTTTCAGGATCAAACATAAATCGATAAACCATGGAGGTTGCTACATGAAAAAACTGGCTTTATTCTGTTTACTCGGAAACGTTGTTTCCTTTTATCCCGATACCGGGCGAAACCCCGCTCTGGGTTCGAAAGGGGGATCTGGCGCTGTTGCGGCAGGCGGCAAATTCTTTTGTGGTGATATCATACGCTCATGCAGCCAAAAAAGACAACATCAACTAACTAAAATGTGAAAAGGGTGCCATAAAAAATGGATACTGGCGGTCAAATAGCGGGAGAAAATCCCCGCGCTGTACTGGACATGCAGGCCATGAGCGCAGCAACCTCCTTGTCACCAGCCCCGGAGCCGGCATCGTAGAGCGTTTGTCGGGTCAGGAATGTAAATGTCAGAATCGTGATGCGGATAATGACAGACACGCACCAGCAGTTCCACGCTCGTAGCTTTCTGTCCTTGCCGGATGGCGGGTAAGGCCTTCAATCCTGAACTGCTGGTTCCGTTCGTTGGCTTCGATTAATGCGAAAATGTCGGGGCCTTCAGTTTCTGATCACCGGTTAGCCTGGAAACGGAAAGTGCGATATCCCGCAGGGCGTTTTGTAAGGTTTTATTCAGGGGACAAGAAATGATCATTTCACGAAATTGCGTGCTGTCTTCCAGAATTTTTCCATCGTTCGGGTTAGCCAGTTTTAGCCATCGTACTCTCTTCATTTCCAATAGCATTAATTTTCTATGCAATAATGTTGCTGAAGCATGATAACAAAAGATTTTGGTCAGTGATAATTACCGTCAATGCCAAATCGTTATCAGGAGTGAACCTGGACGGCGAAAAACAACCAATAATGAATGGCACTCCTCGCAGCGATTGGTTGCCGCGCATCGCGTCGGGTTGGTTCGTTATTGCCTGCGTCTTCGGCGGTATTTTTGACTATTCGCGTAAGTCGGCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCACGATCAGCGTGGTCTGCCAGAAATTAAAATTCGAACCGGGTTAAAAACATGCAATTGTTGCCATCAGCCCGGATGCGGCGTGATCAGCCCGGGGCTGCAAGTCGTGTTACGGAAATGGAAGCGATGAACCAAATATCGCGCAACCAGATCGAAATTAAACAGTGGCAGCAGGTTATCGTGCTGCGGAATGGGCCGGTGAAAACACCTGCTGGTGAAGCCCTCCGACGCTGAATTAAATCAACGCTTTCAGGCTTATATCGCGGGTATTGATCCTGTATTGAAATATGCCAAAACTGGCGTATGAAGGCGATATCAATCATGAAAGCTGACAGACCCGACCGCTGGATAATGCTTATACCCGATATTTTGAAGCAGATTCGTCAGTCTGGCGGCTACGAAACGACGGCTGGCGGAACTGTAACCATCAGCGCACCCGCCTGGGTCGAATGCCGTGATTGGCGCGTTTGTCTTTGCCCTGGTCCTGCCTGACACTGATAACCGTTGTAGTGCTGCATCCAGATCATCATTTCGTCACTAAGTATTGCCGCGCAACAGATGAAGATTCGCCAGGTGGCAGTGAATGATGAACCAGCAGGTCGTAATGAAATCATCTTTAAGTCATCAGTCAGCGAATGCGCATTCACTGGGGATGACGGTCAGGAGCTGTTCGACGGGCGCGGAAGAGATTTATCATGGCACCAGCGAACCTGCGCTGGCGATGCGGACCTGTTATCTCGCGCTGGAGAACAACACGGCTATCGAAGCGACTGCCGCGCATCAAAACAACCACTCGTAACGGAAAACGGAATGCGGATAGCGCGCGTCGTGCCAGCAAAGCTGGCGCAAAGGCTTCTATAAGCCCAGCGATGGCGGGCAGACAGTTTCCGGTGTAGTAAAAGCGAAGCA -18/19 Test #6: test_rawrgrgr_r10_call ........... Passed 46.92 sec +18/19 Test #6: test_rawrgrgr_r10_call ........... Passed 45.15 sec 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch174_read172_strand.fast5", "uuid" : "c99357df-c74f-4ac0-bb2b-10d0414866c0", "normalised_score" : 0.020645, "nblock" : 80790, "sequence_length" : 9342, "blocks_per_base" : 8.648041, "nsample" : 81106, "trim" : [ 200, 80990 ] } 7: CAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTCGGCGTCTGCTTGGGTGTTTAACCTGTCTTAACTAAAAATACAAAAAATTAGCTGGGTGTGAGTGGCACACACCTGTAATCCCCAACTACTCTCCAGGGGCTGAGGCAGGAGAATCCTTAAGCCAGGGCAGAGGTTGAAGTGAGCCGAGGTCTCACCTGCATTGCACTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAGAAGTATTATTAAAAATCAAGTTTCCCGTAATTATTTTAAGAAATGTAGGCTATAATTTCCTCCAAGAATAGATAATGTCTTTTACTGTTATTTGTTCTCTTCGGTACCTCATGGTTTCAGCATTTGGTGAGTATCTAATGAAAGCGTTCATTTAAGAATGTACAAGAAGCTATTTGTAGTAACTAGACCAGAGAAGACCTTGACAATATTTACTTTTCTCTAAGCTGCTAACCTAATGTACTGCAGAGGATCTTGCACATATGTATTACAGGAAATAAATGCTATGCAGATTTTATTAGTGTTTTATGTGATCTAATGTATGCATTTATGCCAGCATCAGTGAGTATGCATAGTTCAAGTAGTCTAACAGTTTTCCTAAGAATGAGACCCTTGAAATTCCTTTTAATCTTTTGATTATATGCTATTTCGCTTAGCATTAAAATGTATAGTGAAGAAGTTGTGGCATCGCAGGAGATAAAGTCTTTAGAAGGAGTAATATAAAAATGGAGTATGAACAAAATTGAAATCACTGCTATGAAGTTAGAAAATACTAGTTTGTACATATGTAAACCTGTACGATAATAAAAATATAAGCCATATAATTACATAATAAAATATGCCAAATATGTTACATACATTTTAATTTCATAACAAAGAGAAAGTGCTTAGAGTTGAATTCAAGTAGGTTCAAAGTGTGTTTGATGCATCCACAATATGCTCATTGTTAGAATTTGGATTGAATATTTTCACTTTTCATACAACTTTCTCACAAAGTTGATAAGTGTTTATTTTCTATTTTTGTATGTGCAGCCTCATATTTTGTCTTTTCTCTCGTTAGGAAGTATCATTTCAGCTTTCCATCCATTTTATTTATGGACATACTGTAGTGGAAAGACCTGTAACACAGAAACGTTGTTGAAAACTTGAGGTAAGAATAAAATATTAAATATTTCTTTCTTTTAGTGTGTGTAATATTGGTACTGATGGTGTGGATCTCCACAAATGCAAAATTAGAACATACCACCTTTACATTACTCTCCTTCCCATATTATCTTTCTCCGCGGATGTCTGCTGTCTTGACACAGTTGTCCAAACTTGCACTTTCTTAACTCTCTTTCCTCATCTTCCCTCCATTTTACAATGCAATCATCAATAAGCTTAGTCTGTTGCCTTCACATTGTTAAAATCATGTCTCCATCTACCTTTAATCTAGCCATTGCTGCTTTAAGTTTTTCATTCTATTGTTTTTCCATGTATTTCTGTAAGCCTCTTATTTGCAAATCTTCACCCCACTTGGCAGCTAGGCCATGCAAATCTTAATATTTTCAGGACAGTGTTCAAATGCAATTCGCCCATTGTATAAGACCTTTCCTTGACTGGTTATCTTTCATAACACAGTGGTTAAGAGTTTGGGCTGTGGAGTCTGGCAGACTCATGTTCCTTTTTAGTTCACCAGTTGAGTGCTTTCTCCATCTGCAAAGTTGGCTCATGGTGCTCTGCAATTACATAGTGCGTAGTAAGCACTCAATGTAGCTGCTGTATTGATGAGTATTGCCATACTCACGCTCATATCTAAACCAGAGATGGCAGTCTTTCTTTAAGGGCCGGATAACGAACATTTTGTGCTTGTGGACCACGTAGTTTCTGTCTCACCTGCTTGACTCTACTGTATTGTAGAAGCAGCCATGGGCATTCTCTATGTGAATGGGCATGACTGTGTTTCAAAGCAACAGTATGTGCAAAACAGGTGGCTAGCCCACAGGCTTTGGCCTCCTCTAGCACTGGGGATGCGTTTAGGATAGCATACTGAACTAGTAATGCAGTTCCTGCTGTCTTACTTTCAAGCCATGGCACATGTTGCTCCCCTACTTGGAATGGCTTTCTGTACTCACTCTTCCTGTTGCTTGGCAAATGCTTATTTATTTTGCCAGGTTTTCTTCCTTATACTCTACAAGGTCTTTCCTGATCCTCTGAGCTGTATCAGATGCCCCCTGTTTTGCAACCTTAGCACCTGTGCTTAATTCTGTCATAATATTTAGCCTTCTCAGCTATGATTTTGTGTTTATGTTTCCCTGACTTTAGATTGTGAGTTTCTTGAAATTATCCCCAGCACCAAGCATTGCTTGGCATGTATTAACTTGTAGATTTCAATTTATTAAGTTGTAGCCAGATTTCGAGCTTTGATCTCAAGATCAGCTGTGCATTTAAAAACACATATGCCTGGGCCTATATGCTGGACTTCAGAGATCTGAGTGTACAAGGTCTTGGTCAGGCATTTGCATTTAGAACCCCCTGAATGAAGTGCCCCAAAATATATGTTGAATAAAGCAATAAAACCCAGTAGGAAGTTTCATGTTAGGACTGTATTCCATTTTTATCACACTGTAGTTTCTGCATTTACTTAATCAGTGTAATATATGATTATTGTTACTACTTCTGATACAGGGACTCAGACGAGGCACTTAGAATATGCTTTGGCTTTAAAAGTCATGGATGGGTACAAATGCCGTAATAGGAACACTATTCACCAACAGAGATGTTGTGGACTTTTGTTCTTAAAGGACAGTAAAGGAGTGAGAAGTGAGTTAGCAAATGCTGGTGAAACTGTCCCCAAGTAAGTTTAATGTGGCTTTATTGACACTGTTATTCAGAGAAAGAAAAAGCCTCCTTATTGGATAAAGTTTATAAAATCACTAAAGAAATAGTTACCCAGTTCCATTATTATTTGTACCAGAAGTGCCACAAGTTATCTTCCTCAGAATGAATCTGCTTTTGTGATCTTATTTTGAGGGATAGACTGTATTAGTGAGCAAGTCTCGTTTGTGACCTTATTACTTCTGGAGTTAACTCATGTTGATATTTTTGATAATTTTTAAATAGAGGGCCTAGTTTTTGTTTTGTTTTGTTTTTAAATGGGGTCTTGCTCTGTGTGCCCAGGTTGGAGTGCAGTGTTATGGTCACTTAGCTCATTTAGCCATGAATTCCTGGGCTCAAGTGATACTTCCCTCAACTCCCAAGTAGCTGGGACTGTAGATGTGCACCACTTAGGCTAATGTCTAATTTTTTACTTTTAAGACAGAGAGTCTCACTGTGTTTCCCAGACTGATCTTGTGAACTCCAGGTCAAATAGTCCACACTCCCACCCATCCTAGAAGCACTGGGATTACAGGCGGGAGCCCTTATGCCTAGCAAAGAGCTAGTGCTTACAGTCCTCGTAGGAGGATTGCTATGGTTTCTAACTCTTAAAATTCTTTTTTTGACTTAGTAAACGTTTAATTTAAAGTTATAAGTGTGAAATTCCTATTAAGATTTTTAACATTCAATATGCTTGATTTCTTTTCTTTTTTTAATAGTGACAGAGGTCTCTTGCTATACCTGTTGCCCAGGCTGGTCTAGAACTCCTGACCCAAAGCGGGATTACAGACATGATGATCCACCATGCCTGGCTGATTTCTTTATAAAATTCTTTATAGGAAAAATACAAATTTGCTTTGATTTCCATAAGAAAGAAATGGCAAGCTGAAAAGGCAAGTGGAAGGTTTAATGAAGGGACAGTTTTATAATGGAAATTTTATAGAGATCACTAAGGGATGATGGTACACAGGGCCTTTACCACCCTCCAGGCCTGGAAGGGACCATAGGAAGAAAGGAGCTGTTATTGGAACCAAACAAGGGTTAGCCTTAGAGAGGGCTGTCAACTTGAGTCTCTTTGGTAGAAGAGTATCCACTGCCAAGCTAGGGCCACTGAGGGGTCATGGTGGGAGTCAAGAAATCAATATCAAACTTCTCTCCCACCATTCTCCCTTAGTCTCCTGGCTGGTTCTTTCCGTGGCTTCTCCATCCAGAGACAAATAAGAGAGTCAGGTGATGTAATTCTGTAGCTGTCAGGCTCTTGGGCATGGGATTGGGTTTGGTGGGATATAGATTTAGAAAGACAAATGGAACTATCCAGCACAGCCATTATTGTGTTTAGTATGTTTTCTTCTTTACTTACAGTGTTTTGGTTTTCGTTTTCAGCTCCCACACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGGGCTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGGATGGATGTTCTACTAAATAACCTGTGAAGCATTTAATGACTTTGTTCCTTGTTTAAACAAGTAAAAACCACAGCTAGTAATCTTAAAGATCGGAGCTGTATATATGTAAATATTCCGTTTGATTAGATCATCCTCTTATCTTGAAAACTGATAATTTATTAGATCAATTTTCATATATTTGTTTAGTCTCATTATGTACAGTGCTCTGAAGTGCCAGGTGCTTTTAGTATGAAATGTATTAAATATAATTCCTTATCAAGGGAAACTTCATTTTAATAGAAAGGTATGACACATACATACATTACATGCAGAATGTGATAGAATGATTGTCACCAGATGCAAAATATTGACTGTGTGTGTCCAATACAGCTTCATGAATTATTAGCATTGCGAGACAGACCTAAATGAATCAGGTATTCTAGGAAGAAGTGAAGTAGAGGAATTTCAGATAGAGATTATATAAGTGAAGTAAAGGCATGCAGCTGAAAATGGAGGCCAGAGTACCAAATAGTCTGGATTTTAGTGGGTTATAAAGTATGACGGGAGAAAAGAAGACTGGGAAGATGGGTTGGGCAGATTGTGGAAGGTCTAAGAAAACTATACTGGAAGCACTTCATTTAATTTCTTAGGAGTGGATAGGAGATAAGTAAGACTTTAGAGTAACAAATATGCCTGTGGACACTCTGAAGACATGTTAAAATGATCATCTTTGGAATTTGAGTAAGAACTACAAGAACTGGGATAGTTTATAAAGGAAAGAGATTTAATTGACTTACAGTTCAGCGTGGCTGGGGAGGCCTCAGGAAACTTATAATCAGCAGAAGGCAAAGGGAAGTAAGGCACCTGCTTCACAAAGGAAGTAGAAGGAAGAAAGGAGCTCCTTATAAAATCGTCAGATCAGATGTAGACTCACTATCACAAGAACAACTTTAAGCATGGGAACCACCCCAAGATTCATTTGCCACCTCCCACCTGGTCTCTCCCTTACCCGACACATGGAGATTATGGAGATTACAAGTTAGGATGAGATTTGGATGGGACGAAGCCCTGACCACACACCATTCCACTTGGCCTCTCCCAAATCTCATGTCGGTTTACTCACATTCCCAAAGTCAACTGTGGCTTCCCAATGGTCCCCAAAGTCTTGCTCATTCCAGCTTAATTAGCCCAGAAGTCCAAGTCCAAAGTACTCATCTGAGATAAGGCCAAAGTCCCTTCCATCTATGAGCCTATAAAATCAAAGAAGTAAGTTAGATTACTTTCTAAGATACAATGGAGATACAGGCAATGGGTAAATACAGCCTTTTCAAATGGGAGAAATTGGCCCAAACAAAGGGGCTGTAGGCCCCAGAAAGTCTGCAATCAATAAGGCAGTCATTAAGCTTTAAAGAGTTCAAATGATCTCCTTTGACTCCATACTCAACATCCAGCCCACTGATGCAGAGTGGGCTCCCACAGCCTCATGCAGCTCGACCTCTGTGGCTCCATGCCTCACATCAGCCCACTGATGCAAGAGTGGGCTCCATGGCCTCGTGCGCTCCACCTCTGTGTGGCTTTGCGGGGTACAGTTTAACCTCTCTGCTGTTTTCACAGGCTGGCGTTGAGTATCTGTGGCTTTTCCATGCACACAGTGCAAGCTGTTGAATCACCATTCTGGGGGTCTGGAGGATGGTGGCCCTCTTCTCATGGCTCCCACTAGGCGGTGCCCCGAGTGGGGACTGTAGGGGTCCAACTGCCCCACATTCCCCTTCTGTACTGCCCTAGTAGGGTTCTCCGCAGGGCCTGCCTACAGCCAACTTCTGCCTGGACATCCAGGCATTTCTATACACATCCTCTGAAATCTAGGCCAGAGGTTCCCCAAACGTTAATTCTTGATTTGCTGCAATGCTGTTACATGTAAGCCGCCAAGGCTTGGGGCTTGCACTCTCCTGGAAGCCCTGGGCTATACGCTGGCCCCTTACAGCCATGAGTGGGGATGCCAGGACGCAAGTTCCCGAGACTGCCAAAGCAGCAAGGCCCTGGCCACAAAACCATTTTCCCTCTTAGGCCTCTGGGCCTGTAATGGGATGGGCTGCCACGTGAAGACCTTGGAGACATTTCCCAGCGTTGTCTTGGCTGTTAACATTTGGCTCCTTGTTACTTATGCACATTTCTGCAGCTGGCTTGGATTTCTCTCCCAGAAATGGGTTTTTCTTTCACCTCATGGTCTGGCCACAGATTTTCCAAGTTTTATGCTCTGCTTCCTTTTAAATGCTGGTTCAGTTTTAGATAATCTCTTTGTGAATGCATATGACTGAATGCTTTCAGAATCAGCCAGGTCACCTGTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAATCATCTTTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGCAGAGGCAAGAATGTACCCTTCTCTTTGCTAGAGCATAAGCAAGAGTCACTTTTATTCTAATCCCCAATTAGTTCCTCATGTCCATCTATGACCACCTCAGTCTGTACTTCATTGTCCATATCACTATCAACATTTTGGTCCAGCCATCTAACAAGTCTCTAGGAAATTTGCAAGCTTTCCACTTCTTCTGTCTTCTGAGCCTCCATCCTGTTCCAACACTGCCTATTACTCCAGTTGCTATAGCAGACTACCAAGGACTAGGTAATTTATAAAGAAAAAGACATTTATTTCTCACAGTTGGCTGGAGGTTAGGAAGTCAAAGGTTGAGGTCCCTACATCTGGCAAGGGCTTTCTTGCTGCTCTCATGATGAAAGTAGAGTACAAGGAGGATGAGAGTGAAACAGAATTGGCAGAATCCTTTTATAATAAAGCCATTCTCAATAACCCACTCCCTTGGTAACAATATTGAATTATTCATTCATGAGGACAGAGCCCTTATATGGCTTAATCATCTTTTAATGCAACCTACTCTTCCAATACTGCCACACTACAGGATTAAGTTTCCAACACATGAACTTTGGGACATAGTCAAATCATGTCATTTGTAAAGGCTTTATAAATGCATTTCTTTTTGTTTGTTTTTGTTTTTAAGGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGGAAGCAAATCTTTTGCCTGGATTTCTTAGATTACAAATTGGTAAGAAATAATGTGGTACTTTCTCCCACAACTTAATCAATGGATTGTAGGTGTAAAGTTTTTCATTTTGCTATATTTGATAGGTGAGAATTAGTATTTTAATATAATTTTAGTTTTTGCATTTCTTTTATCGAGTAAGCTCAGTGTTTTCATAGTAAAATCAGTTGGTGATTTGTTAGCATTTATTCTTCAATTATTTTAGCTTTTTCTCTGTAATTGTAAGTCACTGCTTTCTATTAAAAGTTTTAGATGTTGCTAGAATAAATGTAGGCCAGACTTTAAAATCTCTACCCAAGAATTTTCTTTGCACATTTCCATCTTCTGGGATCATCTAGTTTCTACCTTATAATCACTCAGTGTCAGAGTTTACTTTTGTATTTCAGTTTACTCTTGTGTTGGCTTCATAAAGTACGTAGTCCTCACTTAACATCTCAGTAGATTCTTGGAAATTGCAACTTTAAGTGAACTAGCCTACAGCAGGTTCTTCCTTACCTTCAGCATCATTTCATTATAACATTGTTGAGGAAAAAAATTGGTTTCATTATATGTTGCACTTAAAGTCACAGTTTCCCAGAACCTATCAACAATATTAAGCGAAGGGTTACTAATTGTTCACTGTGAATGTCATGGCCCAATAAGAAAGGACAGGGCGGACTTACTAGGCATTTGTGTCAGGTGAAAGCCAAATATTATCACCAGATGGGAAACAGGGTTTGTAATAGTTTGAATAGGAAAATTGGTGGGGAAATAGCTGTAGTTGTTTCCAGGTGAAATATATTCACCGTATTCATAAAGGAATAAAAGATTTAGTTTAGACAAAACAATGCTATTCAATATATTCAGTTAATGTGGTATTTCAATTTTATTGGTTCTATAGTTCGTATTTATAAATTTATTTTGGTTTATAATTTTGTAAGTGCTTTGAGTATAAGCAGTTTATACCTACCTAATTTTATGTTTAAAGTATTGACAGTAATATTATAATAAAGTAAATACTTGGGAGAAGTGCTTAAACATTTCTGCCTTTCAAAAATTAAATACATTACTCAAATTTGAGAATCTGCTGGAAGTTTAGAGGCCACTGAGAATTACTGTGGTGCTTAAAGGCTTTGACTCACAAGTTTACTTTTTAGTAATAGTTGAGGGACGAGGAAGAGGTATAGAGAGGACAGGATAATAAGTAGCAGCTATTGGTGGCCCTATTCTGGAAGTTAACCTCACACAGTCTTGCTTTTCTTTGTTTCATTAACTCTTGACATTTTATTACTGAGACTCAAGATCTATCTTCTTTGGTGGATGTCTACTCATTTCCCCTGTTTCCTTTCCTTTTATTTATTTGTTTCATTTGTATTTGTGGGTTTTCATACTCATCACTATTTCCTGTTGCTGCTCTAGAGACTCTGCATCTGGTATCCAGGAGTTGGTATTGTCTTCATCTTGCCTTTTCAGTGTAAATCACCCTGTTTTTCCTCCTTATGCCCAGTAATAGGTGATCGTACATCCCTTCACAACAATTAGGACTTTCACCGTTTTGGTTTCAATTACAGAAACTGTTTGAAGAAAATTAAAAGATTTAGAGAGTAATCTCAGCTGAACTGGAAAGAGAATTGCTTTTGACATTTCTGCAAACATGTGATTCTTTTTAAATGTATTTCATTTGCAAGAGGAAATCTGGCAAAAGCATTTCTCATTTTTATGTAAGTGTTTATCTGATAAAGGGGAAGTTTAAAGTATGGTTGGATATCATGTATACTGAAAGTACTTATCGGACGTGAATAGATGAGAACAGGTTAAACACCCAAGCAGACGCCGCAATATCAGCACCAGCAAATTGACCAGCAATACGTGATA 7: >MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5 { "filename" : "MINICOL228_20161012_FNFAB42578_MN17976_mux_scan_HG_52221_ch271_read66_strand.fast5", "uuid" : "06c8e9fa-170e-4fcc-9050-c98f8880cad7", "normalised_score" : 0.012573, "nblock" : 64090, "sequence_length" : 4696, "blocks_per_base" : 13.647785, "nsample" : 64395, "trim" : [ 200, 64290 ] } 7: GGTATTGCTTCGTTCAGTTACGTGTTGCTCTTGCCTACATCGCTCTATCTTCAGCGTCTGCTTGGTGACATACCCATGAAACTATAATTTTTTAACAATTGGAAATTCTTCAGTTTTTATGTACAACAATTTTATTTTCTAACTGTGAAAATATATGGACATCTGATTAGTTTTGTATATATTTGGCATATTGTTTAGCAATATTTTCAATTTACTTACTAATTCTCAGCATAGATTCTTATGGGACTGTCGTATGTAATCATGCGGTGTGAATAATGACGGTTTATTTATTTCAAATTTTCATGCCTTTTATTTCTTTTGCTTTATTGTCCCTGCTTGGCTAGATATTCTTACTGTTGGATGGAAGGATGTTAGCTGACATCCGTATCTTATTTAAGATCTCAAATTGCAAGATTTCATATTTATTATTATTTTTAATTATTTCAACAGGTTTTGGGAACTGGTGATGTTTGTTACATGAATAAGTTTCTTTACTGGTGATTTTGACATTTTGTTGTCTCATCACCTGAGCAGTATTGCACTGTATCCAGTGTTGGCAGTCTTTTATCCCTTATCCTCCTCTGTTCCCCCAGAACCCTCAAGTCCGTTAACATCATTTATGCCTTTGCATCTCATAATTATACTGATGAAGAGATGATGTTTGGACCATTCCTGGAGGTTACTTCACTTAGAATGTGATCTCCATTCCATTCAAATTTACTTTTGAAAATGCATTATTTCGTTCCTTTTTATGGCTGAAGTAGTATTCCATAGTGTGTGTATTGTGTGCCACTATATATATATATATCACATTTTCTTTATTCACTCTTTGATTGATGGGCATTTGGGCTGGTTTCATATTTTTCAATTGCAAATTGTGTGCTGCTATAAACATATTACCTAGCATATACGATACGTATCTATTTCGTATAATGACTTCTTCTGGGCCAAAGGAGTAGGTCTAAGATCTACTTTTAGTTCTTTAAGGAATCTCCACACCATTTCACATTGTGGTTATACTAGTTTACATTCCCATCAAACATTCTTAAATTGTTTCCTTTTCACCAGTCACACCAACATCTATTAGTTTTGATTTTATTAGGGGCCATTCTTTCAGGAGTGAGGTGGTATCCCACTGTGGTTTTGATTTGCATTTCCCTGATCATTAGTGATGTTGGGCATTTTTAATAGTACAGGCCATTTGTATATCTTCTTTGAGGTGTCTATTCATGTCCTTAGCCAACTTTTTGATGGGATTGTTTGTTTAATTCTTGCTGATTTGTTTGGTTCCTTGTCAATTCCTGGATATCAATCCTTTGTCAGATGTATATATTAGAAGGTTTTCTCCATCATGTGGGTTGTCTATTGACTCTACTGATTATTTCAGTTGCTGTGCTAAGCTTTTAGTTGAATTAAATTCCATCTATTTATCTTTGTTTTTCATTACATCTGCTTTTGGGTTCTTGGTCGCGAAGTCTTTGCCTAACCCAATGTCTAGAGGTTTTTCAACGTTATCTTCTAGAATTTTTATAGGGTTCTCATAGATTTAAGTCTTTGATCCATCTTAAGTCAATTTTTGTATAAGGTGAGGTGTCAGGGATCAGTTTCATTCTTCGACATGCTTGGGTTTACCGAATTATTCAGTGTCATTTGTTGATAGGATATCCTTTTCCCACTTCATATTTTGTTTGTTTTGTTGAGGATCAGTTAACATAAGTGTTTGGCTTTATCTCTTGGTTCTCTATTCTCTTCCATTGGTCTGTATGCCTGTTTTATACCAGTACCATGCTGTTTTGCTGATGATGGCCTTAGGTATAGTTTGAAGTCAAGTAATGATGCCTCAGATTTGTTCTTTTGCTTAATCTTGCTTTGGCTATGAGCACTCTTTTGGTTCCATATGAATTTTAGGATTGTTTTCTCGTTCTGTGAAGGAATGATGGTGGTATTTTGATGGGAATTGCATTGGAATTTGTGGGTGCTTTTGGCAGTATGGTCATTTTCACAATATTGATTTTACTCATCCATGAGAATGGGATGTGTTTCCATTTGTTTGTGTATGATTTCTTTTTCAGCAGTGTTTTGTTGTTTTCCTTGTATAGGTCTTTCACCTCCGTGGTTAAAGTATAGTCCCAAATATATATATATATATATTTGCAGCTATTAATAAAGGGGGTTGAGTTCATGATTTGATTCTCAGCTTTGTTGCTATTCATGTATACTTAGGGCTACTGATTTGTGTACATTAATTTGTAATCCTGAAACTTTGCTGAATTCATTTAACAGTTCTAGGAACTTTTGGTTGAGTCTTTAGGGTTTCTAGGTATACGATCATATCATCAGCAAAGACTGGCAGTTTCACTTCCTCTTTACCGATTTGGATGCCCTTTATTTCTTTCTCTTGTGTGATTGCTCCTGGCTAGGACTTCAATACTATGTTGAAGAGGTGATGAGCGTAGGCACCCTTGTCTTTGTTCGATCGCACGGGAAGTAACAACTTTTCCCATTAAATATAATGTTGTTGGCTGTGGGTTTGTCACAGGTGGTTTTATTACCTTAAGGCATATCCCTTCTACGTGGATTTTGCTGAGGGACTTTAATCATAAAGGGATGCTGGATTTTTGTCAAATATTTTTCTGTGTTTATTGGGATGATCATGTGGTTCTTGTTTTTAATTCTGTTTATGTTGTATATCACATTTATGGACTTGTGTATGTTAAAGCATCCCTGCATCCTGGTATGAAACCCACTTGATCATGGTAGATTATCTTTTAATACGTGGTTGGATTCAGTTAGCTGAAGTATTTTATTGAGAGTTTTTGCATCCTAGGTTAATCAGTGATATGGGTCTCAGTTTTATTTTTGTTATGTGTCCTTTCCTGGTTTTGATATTACAGTGATACTGGCTTCATTAGATGATTTAGGGAGGATTTTCTCTTTCTCTGTCTTTTGGAATAGTGTAACTAGGATTGGTACCAATTTTTCTTTGAATGCCTGATAGAGATTCAGCTGTGAATCCGTCTGGTCCTGGGCTTATTTTTGTTTGGTAACATTTTGATTACTATTTCAATCTCACTGCTTGTTATTGGTCTGTTCCAGGTTTCTATTTCTTCCTGGTTTAATCTAGGAGGGTTGTATCTTTCAGGAATTTACATCTCCTCTAGGTTTTCTAGTTTATGTGCATACAGGTGTTCATAGTAGCCTCAGGTGATCTTTTGTATTTCTGTAGTAACAGTTGTAATATCTCCCATTTCATTTTAATTAGGCTTATTTGGATCTTCTCTTTTTCTTGGTTAATCTTGCTAATGGTCTATCAGTTTTGTTAATCTTTTCAAATAACCAGCTTTTTGTTTTATCTTGTATGTTTTGTTTCAATTTCATTTAGCTCTGCTCTGATCTTGGTTTTTCTTTTTCTGCTGGGTTTGGGTTTTGGTTTGTTCTTGCTTCTTTAGCTTCTTGAGGGTGTGACCTTAGATTGTCTATTTGTGCTTTTCAGACTTTAGATGTAGGTATTTAATGTTATCAGTTTCTATGTAGGTATAATGCTATGGATTCTATTCTGGTGTATTTCGAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTTTGTAGTGCTCAGTATTTGTCTGAAAAATACTATCTTCCCTTCATTTATGAAGCTTAGTTTCACTGGATACAAAATTCTTGGCTGATATTTGTTTGGTTTAAAGACTACCGATAGGACCCCAATCCCTTTGTCTTTGCTGTATCGGTTTTGATAGGTTGTGTCACTACTATTGTTCAGTTGAAAGAATTTTTACATTTCTATCCTGATTTCATTGTTCACCCAATGATTTTTCAGGAACAGGTTGTTAATTTTGATGTATTTGCAATGTCTTTGAAGATTTCTTTTTGGGGGTTGATTTCCAATCTTATTCCCTATGGTCTGACATAGTACTTGATAAAATTTTGATATTCTTAAATTTGTTGAGACTTGTTCTGTGGCCCCTGTATATGTTCTATATTGGAGAATGTTCCATGTGCTGATGAATAGAATGTATGTTTTGCATTTGTTAGGTGAATGTTCTCCACATATCACTGTAAATCCGTTGTTGTAGGGTGTAGTTTAAGTACATTGTTTTCTTTGTTAACTTTTCTGTCTTGATGATCTGTCTAGTGCTGTCAGTGGAGTACTGAAGTCCCCACTATTGCTGTGTTGCCATCTATCTCATTTCTTGGGTGTTGTAGTAATTGTTTTATAAATTTAGGGCTCCAGTATTAGGCACTTACATGTTTAGGATTGTGATATTTTCCTAGGACTAGTCCTTTTATCATTATAATGTCTCTCTTTGTGGTTTTTACCGGCTGTTGCTTTAAAGTTTGTTTTGTCTGATACAAGAATAGTTATTCCTGCTTGCTTTTGTGTCCATTTATGGGATATCTTTCTACCCCTTTACCTTAAGCTTATGTGAGTCCTTGTATTGGAGGCTGAGTCTAGTGAGACGGTAGATACTTGGTTAGTGGTATCCATTCTGCCATTCTGTATCTTTTAAATTGGAGCATTTAGGCCCATTTTACATTCAGTGTTAGTATTGAGATGTGAGGTACTATTCTATTCATCATGATATTTGGTGCCTGAATACCTTGGTTTTAAATCATTGCATTATTGTTTATAAGATCCTGTGAGAGGTTAAACGCAAGCAGACGCCGAAGATG 7: >read_ch228_file118.fast5 { "filename" : "read_ch228_file118.fast5", "uuid" : "e47468bf-12e3-4208-a866-babdd780e9c0", "normalised_score" : 0.041418, "nblock" : 28890, "sequence_length" : 2268, "blocks_per_base" : 12.738095, "nsample" : 29150, "trim" : [ 200, 29090 ] } 7: CGGTGCGCATTCAGCCAGCCCTACCTCATTCACCAGTATACCAATCCAGCCTAAGCGCCGGTAGTAAATTACGCCCTTCCGCCGAATCGCCTTCACAAAGCCTTGTTAGTCCCACATGGCCAGTGGCCGGATTGTCGGCTCCGTTTCGGAATGGACGTGGATCTAGTGTGATTGTTGGGAGCGGATGGAAAATCAGCGTGCCTCTCCACCAATCGATCATCGGGTGGTGCGGTGGATGATCGTTACTCGCCAATACAGATGAGAATCCGTTGATTTTGCAGCTCGATTGGGATCGGATGGTGCATTAATAGACCGGGTATCTGAACGGTGATGAATGGGAGAGACAGTGGAACCGGCATTAGGCGGGATAATGGGCGGTTGGAAGAAATGGAATGATACGGCTCATTCAATTTCACTTCATTCACCGTCATGATGAATGGTGTCGCATATCGCTTTGATGGCATCAGTATAATTCCGCCTTCTACCGATATCGAATCCAATAATTAGTAGGTGACTCAGCTGGATCAGGATTTGACGTCGCGGGTGGATGGGATGGGGTTTCGGATATTTGGAATGTCATTAGCCACCTCGGCTGCAGTGTCGTTTCGGTGATGGTGGTGGGGGGTGTGAAATCACCTTCGTCTCGTTGCGCCGGGAGAGGCGTTCAGATGGGGGTGGAAACGGGATCTGGGTATCGGACGAAAGGAGTGGATCAGCATGCATCGATTAGGCTGCATTTCCGCTCGACATGAAACGGATGACTAGCGTAGATCATTGGTGATGGGTGTGGGAGGGTGACATCAGATGGACTTGTAGTCTGGGATTTGGGTCCTAAAGTGGGATGACATACTCTGCATATCGTCGGTGGATCCGCTTGTGCGTGTCTGCTGTCAGAGATTTCGTGCGTTCAATGCGGTAATGGATGGATAAATGGTGGATGGTGGTTCGTTGGCGTGGAGCGGGACCTTTCACTGGGATGATACCTCCGGTGCGGTTGAACCTCGGTGGGTGCGATTCTGCGGTGGATTCTCTCGTCGTGCGGGTAATAATGATTTCGACTGGAATCGGAGGTGTGGAGTGGGTTTTGGTGCCGGATGGGTGGAATTCTCTCGTTGGCGTAGATGAGTGCGCTCTGCCGGTTTGGATGGTCATTGGAAATGTGCATGATGGGGATCAGGATGGATGGTCGGTGTGGGCCCTGTGCTTCATGAGTCGGTGGAAGACGATCGGATCAATTGTTGTCATTTCAGTCAAATGGAATAATTTGAGAATTTAAATTCCCAATTGAATTAGCCTGGATGGACAGGTAGAAAGCCTATGAAAAGCCCATGAAGTGGATGACTGGATCAGTCCTACCAGAATCGTATTAGTATTTCATTATGTCCTTCCACTAATAGATATTATTGATTATCTCCGATAAAATATATGAATGGGTGTGGATTTGTCATAAATCATTGTATCCGTTATTATAAGGAAATCGTTTGGTTGAGGGTGTCGTTGGCTCACTTGTACTTAGTATTCGTATATTAGTCATTTCCCTTTATCATCCCCAGTGTATACAATCTTAGCATCATCGTAATTTCGTTCATTCACCCACATTTTTGATGGCGTAAATCTCATAGAATAGATGGGTTGGGATTTCAGATGTCTGCATGGCCCGGTCAGTATGATGAACGGAGTATCAGATCATGAATCGGATGGTGGATGGGTCGGCCGATTAGATGGTTGTATTATCTCCCAAGAATGGACGTGGAGTGACAAATGGTAAGATGCAAGATGGATTGATACCAGCTTCATCAATCTAATTTTTATAGAATAAGAAAGTCGATCTGGGTGCCGACCGTGAACAGATTTGGAACGCTTGTCAGCCTTACTTATTCTCCAGATAGTGTATAGGTGAATGGTACAGGATAGAATATATGTGCCAGCTCAATCAGATCGTAAATCGTTATTCTTCAAATATAGTCTTAGTCATATTTACTCATCTGACCGAAATCAGATATCTTCAATATAGCGGCAAGTGGATAATGACAGTGTAGATGGTGGATGATAATGGAATGTTACTATCAATGGCGAATGAACCTTTCGAGAAATGGTAGAGCTAGTAGGTGGGAGAATTTGGCCTCCGTACCAGATAAATTTCAAATAAATTCATCATGGGCGGCTGGTGAACGCATCAGTGGAAAAACATATGGATGGATGGGATCGTATCGATGGTGAGCTATCAGCGAATCAGTGGCATTTCCAATCTCATGGGCGGGTGAAGGT -19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 121.81 sec +19/19 Test #7: test_rawrnnrf_r94_call ........... Passed 133.55 sec 100% tests passed, 0 tests failed out of 19 -Total Test time (real) = 127.31 sec +Total Test time (real) = 159.60 sec make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_plain' - rm -fr -- /tmp/dh-xdg-rundir-uUkk8Qz6 + rm -fr -- /tmp/dh-xdg-rundir-a1KAyuTN make[1]: Leaving directory '/build/reproducible-path/scrappie-1.4.2' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake @@ -404054,7 +404090,7 @@ dh_auto_install --builddirectory build_${SIMD} ; \ done install -m0755 -d /build/reproducible-path/scrappie-1.4.2/debian/scrappie - cd build_ssse3 && make -j6 install DESTDIR=/build/reproducible-path/scrappie-1.4.2/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd build_ssse3 && make -j5 install DESTDIR=/build/reproducible-path/scrappie-1.4.2/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' /usr/bin/cmake -S/build/reproducible-path/scrappie-1.4.2 -B/build/reproducible-path/scrappie-1.4.2/build_ssse3 --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -404068,7 +404104,7 @@ -- Installing: /build/reproducible-path/scrappie-1.4.2/debian/scrappie/usr/lib/libscrappie.a make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_ssse3' install -m0755 -d /build/reproducible-path/scrappie-1.4.2/debian/scrappie - cd build_sse3 && make -j6 install DESTDIR=/build/reproducible-path/scrappie-1.4.2/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd build_sse3 && make -j5 install DESTDIR=/build/reproducible-path/scrappie-1.4.2/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' /usr/bin/cmake -S/build/reproducible-path/scrappie-1.4.2 -B/build/reproducible-path/scrappie-1.4.2/build_sse3 --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -404082,7 +404118,7 @@ -- Installing: /build/reproducible-path/scrappie-1.4.2/debian/scrappie/usr/lib/libscrappie.a make[2]: Leaving directory '/build/reproducible-path/scrappie-1.4.2/build_sse3' install -m0755 -d /build/reproducible-path/scrappie-1.4.2/debian/scrappie - cd build_sse2 && make -j6 install DESTDIR=/build/reproducible-path/scrappie-1.4.2/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd build_sse2 && make -j5 install DESTDIR=/build/reproducible-path/scrappie-1.4.2/debian/scrappie AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/scrappie-1.4.2/build_sse2' /usr/bin/cmake -S/build/reproducible-path/scrappie-1.4.2 -B/build/reproducible-path/scrappie-1.4.2/build_sse2 --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -404150,21 +404186,21 @@ chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/79/402c0a464bc6a9bdc8b333d4ef1ba2da0c95f1.debug strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie-sse2 objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/79/402c0a464bc6a9bdc8b333d4ef1ba2da0c95f1.debug debian/scrappie/usr/bin/scrappie-sse2 - install -m0755 -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91 - objcopy --only-keep-debug --compress-debug-sections debian/scrappie/usr/bin/scrappie-sse3 debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91/64599ed5d29ff3616b8a440cf735234110a0c9.debug - chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91/64599ed5d29ff3616b8a440cf735234110a0c9.debug - strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie-sse3 - objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91/64599ed5d29ff3616b8a440cf735234110a0c9.debug debian/scrappie/usr/bin/scrappie-sse3 - install -m0755 -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1 - objcopy --only-keep-debug --compress-debug-sections debian/scrappie/usr/bin/scrappie-ssse3 debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1/731f2c6556d35c6217f3613a1908e83d49beeb.debug - chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1/731f2c6556d35c6217f3613a1908e83d49beeb.debug - strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie-ssse3 - objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1/731f2c6556d35c6217f3613a1908e83d49beeb.debug debian/scrappie/usr/bin/scrappie-ssse3 install -m0755 -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/2e objcopy --only-keep-debug --compress-debug-sections debian/scrappie/usr/bin/scrappie-plain debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/2e/3b3354a07455b0d033733a74d8398774d0d001.debug chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/2e/3b3354a07455b0d033733a74d8398774d0d001.debug strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie-plain objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/2e/3b3354a07455b0d033733a74d8398774d0d001.debug debian/scrappie/usr/bin/scrappie-plain + install -m0755 -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1 + objcopy --only-keep-debug --compress-debug-sections debian/scrappie/usr/bin/scrappie-ssse3 debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1/731f2c6556d35c6217f3613a1908e83d49beeb.debug + chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1/731f2c6556d35c6217f3613a1908e83d49beeb.debug + strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie-ssse3 + objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/a1/731f2c6556d35c6217f3613a1908e83d49beeb.debug debian/scrappie/usr/bin/scrappie-ssse3 + install -m0755 -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91 + objcopy --only-keep-debug --compress-debug-sections debian/scrappie/usr/bin/scrappie-sse3 debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91/64599ed5d29ff3616b8a440cf735234110a0c9.debug + chmod 0644 -- debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91/64599ed5d29ff3616b8a440cf735234110a0c9.debug + strip --remove-section=.comment --remove-section=.note debian/scrappie/usr/bin/scrappie-sse3 + objcopy --add-gnu-debuglink debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.build-id/91/64599ed5d29ff3616b8a440cf735234110a0c9.debug debian/scrappie/usr/bin/scrappie-sse3 strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/scrappie/usr/lib/libscrappie.a install -m0755 -d debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/scrappie/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/scrappie/dbgsym-root/usr/lib/debug/.dwz @@ -404177,7 +404213,7 @@ rm -f debian/scrappie/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=cmake install -m0755 -d debian/scrappie/DEBIAN - dpkg-shlibdeps -Tdebian/scrappie.substvars debian/scrappie/usr/bin/scrappie-sse2 debian/scrappie/usr/bin/scrappie-sse3 debian/scrappie/usr/bin/scrappie-ssse3 debian/scrappie/usr/bin/scrappie-plain + dpkg-shlibdeps -Tdebian/scrappie.substvars debian/scrappie/usr/bin/scrappie-sse2 debian/scrappie/usr/bin/scrappie-plain debian/scrappie/usr/bin/scrappie-ssse3 debian/scrappie/usr/bin/scrappie-sse3 dh_installdeb -O--buildsystem=cmake install -m0755 -d debian/scrappie/DEBIAN rm -f debian/scrappie.debhelper.log @@ -404212,12 +404248,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15575/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/22572 and its subdirectories -I: Current time: Tue Dec 16 04:12:08 -12 2025 -I: pbuilder-time-stamp: 1765901528 +I: removing directory /srv/workspace/pbuilder/15575 and its subdirectories +I: Current time: Wed Nov 13 23:58:32 +14 2024 +I: pbuilder-time-stamp: 1731491912