Diff of the two buildlogs: -- --- b1/build.log 2024-04-02 14:13:12.639464597 +0000 +++ b2/build.log 2024-04-02 14:14:48.267383999 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Apr 2 02:10:19 -12 2024 -I: pbuilder-time-stamp: 1712067019 +I: Current time: Tue May 6 10:36:16 +14 2025 +I: pbuilder-time-stamp: 1746477376 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,54 +26,86 @@ dpkg-source: info: unpacking presto_0.7.2-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/12073/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/D01_modify_environment starting +debug: Running on ionos6-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 5 20:36 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='368e9be7d24441f692ff095737cfdd70' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='12073' - PS1='# ' - PS2='> ' + INVOCATION_ID=9edec3b80a1849b68f4c1e8edffe6b9e + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=68494 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aBGxFDZi/pbuilderrc_zASP --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aBGxFDZi/b1 --logfile b1/build.log presto_0.7.2-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aBGxFDZi/pbuilderrc_uU9g --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aBGxFDZi/b2 --logfile b2/build.log presto_0.7.2-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos12-i386 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 1 11:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/12073/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 5 17:48 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -244,7 +276,7 @@ Get: 117 http://deb.debian.org/debian trixie/main i386 python3-pandas-lib i386 2.1.4+dfsg-5 [7492 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 python3-pandas all 2.1.4+dfsg-5 [3015 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 python3-scipy i386 1.11.4-6 [19.0 MB] -Fetched 98.9 MB in 2s (57.0 MB/s) +Fetched 98.9 MB in 2s (40.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19876 files and directories currently installed.) @@ -640,8 +672,8 @@ Setting up tzdata (2024a-1) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Apr 2 14:11:03 UTC 2024. -Universal Time is now: Tue Apr 2 14:11:03 UTC 2024. +Local time is now: Mon May 5 20:36:40 UTC 2025. +Universal Time is now: Mon May 5 20:36:40 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:i386 (1:1.1.8-1) ... @@ -750,7 +782,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/presto-0.7.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../presto_0.7.2-1_source.changes +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/presto-0.7.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../presto_0.7.2-1_source.changes dpkg-buildpackage: info: source package presto dpkg-buildpackage: info: source version 0.7.2-1 dpkg-buildpackage: info: source distribution unstable @@ -787,15 +823,15 @@ running build running build_py creating /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/IO.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Applications.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto +copying presto/IO.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/__init__.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto copying presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto -copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto running build_scripts creating build creating build/scripts-3.12 @@ -831,15 +867,15 @@ running build running build_py creating /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/IO.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Version.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Applications.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto +copying presto/IO.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/__init__.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto copying presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto -copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto running build_scripts creating build/scripts-3.11 copying and adjusting bin/AlignSets.py -> build/scripts-3.11 @@ -1043,7 +1079,7 @@ -> test_calculateDistances() <- test_calculateDistances() 0.001 -> test_countMismatches() -<- test_countMismatches() 0.002 +<- test_countMismatches() 0.001 -> test_initializeMismatchDictionary() <- test_initializeMismatchDictionary() 0.000 -> test_getFileType() @@ -1300,7 +1336,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_localAlignment() 0.052 +<- test_localAlignment() 0.027 -> test_maskSeq() TEST CUT> ID> SEQ|PRIMER=A|BARCODE=CCA @@ -1318,7 +1354,7 @@ ID> SEQ|PRIMER=A|BARCODE=CCA SEQ> CCACGTTTTAGTAATTAATA -<- test_maskSeq() 0.003 +<- test_maskSeq() 0.001 -> test_scoreAlignment() SEQ1> SEQ> CCACGTTTTAGTAATTAATA @@ -1390,7 +1426,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_scoreAlignment() 0.017 +<- test_scoreAlignment() 0.008 -> test_calculateSetError() REF> CGGCGTAA 0.4347826086956522 REF> NNNNNNNN 1.0 @@ -1433,7 +1469,7 @@ N==A> 0 A==-> 1 -==A> 0 -<- test_scoreDNA() 0.001 +<- test_scoreDNA() 0.000 -> test_scoreSeqPair() Default DNA Scores> SEQ1> CGGCGTAA @@ -1618,7 +1654,7 @@ test_deletionUnify (tests.test_UnifyHeaders.TestConvertHeaders.test_deletionUnify) ... ok ---------------------------------------------------------------------- -Ran 38 tests in 0.099s +Ran 38 tests in 0.054s OK (skipped=6) SEQ3> CGGC--AA @@ -1951,7 +1987,7 @@ WEIGHT> 8 ERROR> 0.250000 -<- test_scoreSeqPair() 0.012 +<- test_scoreSeqPair() 0.006 -> test_weightDNA() DNA Weight> SEQ1> 8 @@ -1977,7 +2013,7 @@ ID> SEQ5|BARCODE=CCCC|SAMPLE=S2 -> SEQ5|BARCODE=CCCC|SAMPLE=S1 ID> SEQ6|BARCODE=GGGG|SAMPLE=S2 -> SEQ6|BARCODE=GGGG|SAMPLE=S2 ID> SEQ7|BARCODE=GGGG|SAMPLE=S2 -> SEQ7|BARCODE=GGGG|SAMPLE=S2 -<- test_consensusUnify() 0.001 +<- test_consensusUnify() 0.000 -> test_deletionUnify() ID> SEQ0|BARCODE=AAAA|SAMPLE=S1 -> False ID> SEQ1|BARCODE=AAAA|SAMPLE=S1 -> False @@ -2060,7 +2096,7 @@ SEQ4> CGNN--TA SEQ5> CGGC--AA ERROR> 0.233333 -<- test_calculateSetError() 0.001 +<- test_calculateSetError() 0.000 -> test_deleteSeqPositions() MAX_GAP=0.4> CGGCAA MAX_GAP=0.8> CGGCGTAA @@ -2146,7 +2182,7 @@ -> test_calculateDistances() <- test_calculateDistances() 0.001 -> test_countMismatches() -<- test_countMismatches() 0.003 +<- test_countMismatches() 0.001 -> test_initializeMismatchDictionary() <- test_initializeMismatchDictionary() 0.000 -> test_getFileType() @@ -2403,7 +2439,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_localAlignment() 0.053 +<- test_localAlignment() 0.026 -> test_maskSeq() TEST CUT> ID> SEQ|PRIMER=A|BARCODE=CCA @@ -2421,7 +2457,7 @@ ID> SEQ|PRIMER=A|BARCODE=CCA SEQ> CCACGTTTTAGTAATTAATA -<- test_maskSeq() 0.003 +<- test_maskSeq() 0.001 -> test_scoreAlignment() SEQ1> SEQ> CCACGTTTTAGTAATTAATA @@ -2493,7 +2529,7 @@ GAPS> 0 ERROR> 1.000000 -<- test_scoreAlignment() 0.016 +<- test_scoreAlignment() 0.008 -> test_calculateSetError() REF> CGGCGTAA 0.4347826086956522 REF> NNNNNNNN 1.0 @@ -2536,7 +2572,7 @@ N==A> 0 A==-> 1 -==A> 0 -<- test_scoreDNA() 0.001 +<- test_scoreDNA() 0.000 -> test_scoreSeqPair() Default DNA Scores> SEQ1> CGGCGTAA @@ -2705,7 +2741,7 @@ test_deletionUnify (tests.test_UnifyHeaders.TestConvertHeaders.test_deletionUnify) ... ok ---------------------------------------------------------------------- -Ran 38 tests in 0.103s +Ran 38 tests in 0.053s OK (skipped=6) ERROR> 0.750000 @@ -3054,7 +3090,7 @@ WEIGHT> 8 ERROR> 0.250000 -<- test_scoreSeqPair() 0.012 +<- test_scoreSeqPair() 0.006 -> test_weightDNA() DNA Weight> SEQ1> 8 @@ -3080,7 +3116,7 @@ ID> SEQ5|BARCODE=CCCC|SAMPLE=S2 -> SEQ5|BARCODE=CCCC|SAMPLE=S1 ID> SEQ6|BARCODE=GGGG|SAMPLE=S2 -> SEQ6|BARCODE=GGGG|SAMPLE=S2 ID> SEQ7|BARCODE=GGGG|SAMPLE=S2 -> SEQ7|BARCODE=GGGG|SAMPLE=S2 -<- test_consensusUnify() 0.001 +<- test_consensusUnify() 0.000 -> test_deletionUnify() ID> SEQ0|BARCODE=AAAA|SAMPLE=S1 -> False ID> SEQ1|BARCODE=AAAA|SAMPLE=S1 -> False @@ -3119,80 +3155,80 @@ creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12 creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/IO.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Commandline.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Defaults.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Version.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Sequence.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Annotation.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Applications.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Multiprocessing.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/MaskPrimers.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/EstimateError.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/CollapseSeq.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/ConvertHeaders.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/EstimateError.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/BuildConsensus.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/AssemblePairs.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/MaskPrimers.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/UnifyHeaders.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/__pycache__/BuildConsensus.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/IO.py to IO.cpython-312.pyc -/usr/lib/python3.12/dist-packages/presto/IO.py:34: SyntaxWarning: invalid escape sequence '\s' -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Version.py to Version.cpython-312.pyc +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Multiprocessing.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Applications.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/IO.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Sequence.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Commandline.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Defaults.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Annotation.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__pycache__/Version.cpython-312.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.12_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/PairSeq.py to PairSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/EstimateError.py to EstimateError.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AlignSets.py to AlignSets.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseLog.py to ParseLog.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Sequence.py to Sequence.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Applications.py to Applications.cpython-312.pyc -/usr/lib/python3.12/dist-packages/presto/Applications.py:61: SyntaxWarning: invalid escape sequence '\.' -/usr/lib/python3.12/dist-packages/presto/Applications.py:288: SyntaxWarning: invalid escape sequence '\>' -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Version.py to Version.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Annotation.py to Annotation.cpython-312.pyc /usr/lib/python3.12/dist-packages/presto/Annotation.py:293: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/presto/Annotation.py:368: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/presto/Annotation.py:491: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/presto/Annotation.py:493: SyntaxWarning: invalid escape sequence '\(' /usr/lib/python3.12/dist-packages/presto/Annotation.py:494: SyntaxWarning: invalid escape sequence '\s' -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Defaults.py to Defaults.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Commandline.py to Commandline.cpython-312.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Multiprocessing.py to Multiprocessing.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/PairSeq.py to PairSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/EstimateError.py to EstimateError.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ParseLog.py to ParseLog.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-312.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/bin/AlignSets.py to AlignSets.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Applications.py to Applications.cpython-312.pyc +/usr/lib/python3.12/dist-packages/presto/Applications.py:61: SyntaxWarning: invalid escape sequence '\.' +/usr/lib/python3.12/dist-packages/presto/Applications.py:288: SyntaxWarning: invalid escape sequence '\>' +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Commandline.py to Commandline.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/IO.py to IO.cpython-312.pyc +/usr/lib/python3.12/dist-packages/presto/IO.py:34: SyntaxWarning: invalid escape sequence '\s' +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.12/dist-packages/presto/Defaults.py to Defaults.cpython-312.pyc running install_egg_info running egg_info creating presto.egg-info @@ -3209,34 +3245,34 @@ Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.12/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.12/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.12/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 +copying build/scripts-3.12/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/PairSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/MaskPrimers.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/EstimateError.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ClusterSets.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseLog.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseHeaders.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ClusterSets.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AlignSets.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseLog.py to 755 I: pybuild base:305: /usr/bin/python3 setup.py install --root /build/reproducible-path/presto-0.7.2/debian/python3-presto running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. @@ -3258,72 +3294,72 @@ running install_lib creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11 creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Applications.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Defaults.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Commandline.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Annotation.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/IO.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Multiprocessing.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Sequence.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Version.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/AssemblePairs.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/UnifyHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/ConvertHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/BuildConsensus.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/CollapseSeq.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/EstimateError.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ -copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/ConvertHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/UnifyHeaders.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/MaskPrimers.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/__pycache__/CollapseSeq.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/IO.py to IO.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Version.py to Version.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Sequence.py to Sequence.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Applications.py to Applications.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Annotation.py to Annotation.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Defaults.py to Defaults.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Commandline.py to Commandline.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Multiprocessing.py to Multiprocessing.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-311.pyc +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +creating /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Sequence.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Annotation.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Defaults.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Applications.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Commandline.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Version.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/Multiprocessing.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__pycache__/IO.cpython-311.pyc -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__pycache__ +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto +copying /build/reproducible-path/presto-0.7.2/.pybuild/cpython3_3.11_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/PairSeq.py to PairSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/EstimateError.py to EstimateError.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseLog.py to ParseLog.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-311.pyc -byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-311.pyc byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/AlignSets.py to AlignSets.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/bin/ParseLog.py to ParseLog.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Sequence.py to Sequence.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Version.py to Version.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Annotation.py to Annotation.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Multiprocessing.py to Multiprocessing.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Applications.py to Applications.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Commandline.py to Commandline.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/IO.py to IO.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto/Defaults.py to Defaults.cpython-311.pyc running install_egg_info running egg_info writing presto.egg-info/PKG-INFO @@ -3337,34 +3373,34 @@ Copying presto.egg-info to /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/lib/python3.11/dist-packages/presto-0.7.2.egg-info Skipping SOURCES.txt running install_scripts -copying build/scripts-3.11/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/PairSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/MaskPrimers.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/EstimateError.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/SplitSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/CollapseSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/FilterSeq.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -copying build/scripts-3.11/AssemblePairs.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/ParseHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/ClusterSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin +copying build/scripts-3.11/BuildConsensus.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin copying build/scripts-3.11/AlignSets.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 +copying build/scripts-3.11/ParseLog.py -> /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/PairSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/MaskPrimers.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/EstimateError.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/SplitSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ClusterSets.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/CollapseSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseLog.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/FilterSeq.py to 755 -changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AssemblePairs.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseHeaders.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ClusterSets.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/BuildConsensus.py to 755 changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/AlignSets.py to 755 +changing mode of /build/reproducible-path/presto-0.7.2/debian/python3-presto/usr/bin/ParseLog.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/presto-0.7.2' dh_install @@ -3395,8 +3431,8 @@ dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'presto' in '../presto_0.7.2-1_all.deb'. dpkg-deb: building package 'python3-presto' in '../python3-presto_0.7.2-1_i386.deb'. +dpkg-deb: building package 'presto' in '../presto_0.7.2-1_all.deb'. dpkg-genbuildinfo --build=binary -O../presto_0.7.2-1_i386.buildinfo dpkg-genchanges --build=binary -O../presto_0.7.2-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -3405,12 +3441,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/68494/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/12073 and its subdirectories -I: Current time: Tue Apr 2 02:13:11 -12 2024 -I: pbuilder-time-stamp: 1712067191 +I: removing directory /srv/workspace/pbuilder/68494 and its subdirectories +I: Current time: Tue May 6 10:37:47 +14 2025 +I: pbuilder-time-stamp: 1746477467