Diff of the two buildlogs: -- --- b1/build.log 2024-05-20 17:13:23.870994852 +0000 +++ b2/build.log 2024-05-20 17:28:29.828437849 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jun 22 11:25:22 -12 2025 -I: pbuilder-time-stamp: 1750634722 +I: Current time: Tue May 21 07:13:27 +14 2024 +I: pbuilder-time-stamp: 1716225207 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,53 +29,85 @@ dpkg-source: info: applying i386-fix.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4703/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/D01_modify_environment starting +debug: Running on infom07-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 20 17:13 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='f417f0e96cf947f1900b21df3d0ead8e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4703' - PS1='# ' - PS2='> ' + INVOCATION_ID=aad070583b4c403498cf024a674a9037 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15564 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.F1Ka06kL/pbuilderrc_WY8x --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.F1Ka06kL/b1 --logfile b1/build.log meep-mpi-default_1.25.0-2.dsc' - SUDO_GID='111' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.F1Ka06kL/pbuilderrc_zcmk --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.F1Ka06kL/b2 --logfile b2/build.log meep-mpi-default_1.25.0-2.dsc' + SUDO_GID=111 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom08-i386 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Jun 21 17:48 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/4703/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 17 14:57 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -334,7 +366,7 @@ Get: 183 http://deb.debian.org/debian trixie/main i386 python3-h5py all 3.10.0-1 [14.4 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 quilt all 0.68-1 [437 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 swig i386 4.2.1-1 [1499 kB] -Fetched 105 MB in 2s (46.7 MB/s) +Fetched 105 MB in 3s (39.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19686 files and directories currently installed.) @@ -935,8 +967,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Jun 22 23:25:46 UTC 2025. -Universal Time is now: Sun Jun 22 23:25:46 UTC 2025. +Local time is now: Mon May 20 17:14:09 UTC 2024. +Universal Time is now: Mon May 20 17:14:09 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -1123,7 +1155,11 @@ fakeroot is already the newest version (1.33-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/meep-mpi-default-1.25.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../meep-mpi-default_1.25.0-2_source.changes +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/meep-mpi-default-1.25.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../meep-mpi-default_1.25.0-2_source.changes dpkg-buildpackage: info: source package meep-mpi-default dpkg-buildpackage: info: source version 1.25.0-2 dpkg-buildpackage: info: source distribution unstable @@ -1392,18 +1428,18 @@ config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0' dh_auto_build - make -j6 + make -j5 make[1]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0' make all-recursive make[2]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0' Making all in src make[3]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' make sphere_quad -(echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp make[4]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sphere-quad.o sphere-quad.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +(echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../src/sphere_quad) > sphere-quad.h @@ -1411,29 +1447,25 @@ make[4]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' Making all in support make[5]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src/support' -/bin/bash ../../libtool --tag=CC --mode=compile i686-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mt19937ar.lo mt19937ar.c +/bin/sh ../../libtool --tag=CC --mode=compile i686-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mt19937ar.lo mt19937ar.c libtool: compile: i686-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -c mt19937ar.c -fPIC -DPIC -o .libs/mt19937ar.o libtool: compile: i686-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -c mt19937ar.c -fPIC -DPIC -o mt19937ar.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CC --mode=link i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libsupport.la mt19937ar.lo -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../../libtool --tag=CC --mode=link i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libsupport.la mt19937ar.lo -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: i686-linux-gnu-ar cr .libs/libsupport.a .libs/mt19937ar.o libtool: link: i686-linux-gnu-ranlib .libs/libsupport.a libtool: link: ( cd ".libs" && rm -f "libsupport.la" && ln -s "../libsupport.la" "libsupport.la" ) make[5]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0/src/support' make[5]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array_slice.lo array_slice.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o anisotropic_averaging.lo anisotropic_averaging.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bands.lo bands.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o boundaries.lo boundaries.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bicgstab.lo bicgstab.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o casimir.lo casimir.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array_slice.lo array_slice.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o anisotropic_averaging.lo anisotropic_averaging.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bands.lo bands.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o boundaries.lo boundaries.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bicgstab.lo bicgstab.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o .libs/boundaries.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o .libs/array_slice.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o .libs/bands.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o .libs/anisotropic_averaging.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o .libs/boundaries.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o .libs/bicgstab.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o .libs/casimir.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o bands.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o bicgstab.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o .libs/anisotropic_averaging.o boundaries.cpp: In member function 'meep::ivec meep::fields::ilattice_vector(meep::direction) const': boundaries.cpp:120:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 120 | switch (d) { @@ -1441,16 +1473,23 @@ boundaries.cpp:128:5: note: here 128 | case D3: | ^~~~ -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o casimir.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cw_fields.lo cw_fields.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o bicgstab.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o bands.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o array_slice.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o casimir.lo casimir.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cw_fields.lo cw_fields.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o .libs/casimir.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o .libs/cw_fields.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft.lo dft.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o boundaries.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o anisotropic_averaging.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o casimir.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o cw_fields.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft.lo dft.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o .libs/dft.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o array_slice.o >/dev/null 2>&1 dft.cpp:269: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 269 | PLOOP_OVER_IVECS(fc->gv, is, ie, idx) { | -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o anisotropic_averaging.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft_ldos.lo dft_ldos.cpp dft.cpp: In member function 'std::complex meep::dft_chunk::process_dft_component(int, meep::direction*, meep::ivec, meep::ivec, int, meep::h5file*, meep::realnum*, int, std::complex*, void*, void*, int, bool, meep::fields*)': dft.cpp:912:34: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] 912 | "array of size %lu", @@ -1469,21 +1508,22 @@ | | | | long unsigned int size_t {aka unsigned int} | %u -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o boundaries.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft_ldos.lo dft_ldos.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o .libs/dft_ldos.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o cw_fields.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o dft_ldos.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o energy_and_flux.lo energy_and_flux.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o .libs/energy_and_flux.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o dft.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields.lo fields.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields_dump.lo fields_dump.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fix_boundary_sources.lo fix_boundary_sources.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o energy_and_flux.lo energy_and_flux.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields.lo fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o .libs/fields.o +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o .libs/energy_and_flux.o +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o dft_ldos.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields_dump.lo fields_dump.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields_dump.cpp -fPIC -DPIC -o .libs/fields_dump.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fix_boundary_sources.cpp -fPIC -DPIC -o .libs/fix_boundary_sources.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o energy_and_flux.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields_dump.cpp -fPIC -DPIC -o fields_dump.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fix_boundary_sources.lo fix_boundary_sources.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fix_boundary_sources.cpp -fPIC -DPIC -o .libs/fix_boundary_sources.o +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o loop_in_chunks.lo loop_in_chunks.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o .libs/loop_in_chunks.o +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o fields.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft.cpp -fPIC -DPIC -o dft.o >/dev/null 2>&1 In file included from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2911, from fix_boundary_sources.cpp:11: @@ -1494,33 +1534,28 @@ /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o loop_in_chunks.lo loop_in_chunks.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o .libs/loop_in_chunks.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5fields.lo h5fields.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields_dump.cpp -fPIC -DPIC -o fields_dump.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5fields.lo h5fields.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5fields.cpp -fPIC -DPIC -o .libs/h5fields.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fields.cpp -fPIC -DPIC -o fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c fix_boundary_sources.cpp -fPIC -DPIC -o fix_boundary_sources.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o loop_in_chunks.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5file.lo h5file.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o initialize.lo initialize.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5file.lo h5file.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o .libs/h5file.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o .libs/initialize.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5fields.cpp -fPIC -DPIC -o h5fields.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate.lo integrate.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate2.lo integrate2.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o h5file.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o initialize.lo initialize.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate.lo integrate.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o .libs/initialize.o +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate2.lo integrate2.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o material_data.lo material_data.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o .libs/integrate.o +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c material_data.cpp -fPIC -DPIC -o .libs/material_data.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o .libs/integrate2.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c h5file.cpp -fPIC -DPIC -o h5file.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o monitor.lo monitor.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c initialize.cpp -fPIC -DPIC -o initialize.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o material_data.lo material_data.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o monitor.lo monitor.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c material_data.cpp -fPIC -DPIC -o .libs/material_data.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o .libs/monitor.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mympi.lo mympi.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o integrate2.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o .libs/mympi.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o integrate.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c material_data.cpp -fPIC -DPIC -o material_data.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o integrate2.o >/dev/null 2>&1 monitor.cpp: In member function 'std::complex meep::structure_chunk::get_chi1inv_at_pt(meep::component, meep::direction, int, double) const': monitor.cpp:327:19: warning: 'comp_list' may be used uninitialized [-Wmaybe-uninitialized] 327 | component cc = comp_list[com_it]; @@ -1528,8 +1563,21 @@ monitor.cpp:274:15: note: 'comp_list' declared here 274 | component comp_list[3]; | ^~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o multilevel-atom.lo multilevel-atom.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mympi.lo mympi.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o monitor.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o multilevel-atom.lo multilevel-atom.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o .libs/mympi.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o .libs/multilevel-atom.o +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o near2far.lo near2far.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o .libs/near2far.o +multilevel-atom.cpp: In member function 'virtual void* meep::multilevel_susceptibility::new_internal_data(meep::realnum* (*)[2], const meep::grid_volume&) const': +multilevel-atom.cpp:138:53: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] + 138 | if (d == NULL) meep::abort("%s:%i:out of memory(%lu)", __FILE__, __LINE__, sz); + | ~~^ ~~ + | | | + | long unsigned int size_t {aka unsigned int} + | %u +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o output_directory.lo output_directory.cpp In file included from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2911, from mympi.cpp:32: @@ -1540,16 +1588,8 @@ /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c material_data.cpp -fPIC -DPIC -o material_data.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o monitor.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o near2far.lo near2far.cpp -multilevel-atom.cpp: In member function 'virtual void* meep::multilevel_susceptibility::new_internal_data(meep::realnum* (*)[2], const meep::grid_volume&) const': -multilevel-atom.cpp:138:53: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] - 138 | if (d == NULL) meep::abort("%s:%i:out of memory(%lu)", __FILE__, __LINE__, sz); - | ~~^ ~~ - | | | - | long unsigned int size_t {aka unsigned int} - | %u +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o .libs/output_directory.o +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o random.lo random.cpp mympi.cpp: In function 'void meep::abort(const char*, ...)': mympi.cpp:242:12: warning: ignoring return value of 'int vasprintf(char**, const char*, __gnuc_va_list)' declared with attribute 'warn_unused_result' [-Wunused-result] 242 | vasprintf(&s, fmt, ap); @@ -1558,12 +1598,8 @@ mympi.cpp:686:16: warning: ignoring return value of 'int vasprintf(char**, const char*, __gnuc_va_list)' declared with attribute 'warn_unused_result' [-Wunused-result] 686 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o output_directory.lo output_directory.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o .libs/near2far.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o .libs/output_directory.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o random.lo random.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o multilevel-atom.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:115:35: warning: '-out' directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 115 | snprintf(outdirname, buflen, "%s-out", basename); @@ -1609,12 +1645,18 @@ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o output_directory.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o random.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o mympi.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sources.lo sources.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sources.lo sources.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o .libs/sources.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o random.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step.lo step.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_db.lo step_db.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step.lo step.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o near2far.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_db.lo step_db.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o .libs/step.o +step.cpp:144: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] + 144 | CHUNK_OPENMP + | +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o .libs/step_db.o In file included from sources.cpp:27: meep_internals.hpp: In constructor 'meep::src_vol::src_vol(meep::component, meep::src_time*, std::vector&&, std::vector >&&, bool)': meep_internals.hpp:82:38: warning: 'meep::src_vol::amp' will be initialized after [-Wreorder] @@ -1623,26 +1665,21 @@ meep_internals.hpp:78:8: warning: 'bool meep::src_vol::needs_boundary_fix' [-Wreorder] 78 | bool needs_boundary_fix; // whether fix_boundary_sources needs calling | ^~~~~~~~~~~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o stress.lo stress.cpp sources.cpp:168:1: warning: when initialized here [-Wreorder] 168 | src_vol::src_vol(component cc, src_time *st, std::vector &&ind, | ^~~~~~~ -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o .libs/step.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o .libs/step_db.o -step.cpp:144: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] - 144 | CHUNK_OPENMP - | -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o .libs/stress.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c near2far.cpp -fPIC -DPIC -o near2far.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o step.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure.lo structure.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o step_db.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o stress.lo stress.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure.lo structure.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o .libs/stress.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o .libs/structure.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure_dump.lo structure_dump.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure_dump.lo structure_dump.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o susceptibility.lo susceptibility.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o time.lo time.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o .libs/structure_dump.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o susceptibility.lo susceptibility.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o .libs/susceptibility.o susceptibility.cpp:228: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 228 | PLOOP_OVER_VOL_OWNED(gv, c, i) { @@ -1653,9 +1690,6 @@ susceptibility.cpp:252: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 252 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o time.lo time.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_eh.lo update_eh.cpp -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mpb.lo mpb.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o .libs/time.o susceptibility.cpp: In member function 'virtual void* meep::lorentzian_susceptibility::new_internal_data(meep::realnum* (*)[2], const meep::grid_volume&) const': susceptibility.cpp:116:53: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] @@ -1671,7 +1705,7 @@ | | | | long unsigned int size_t {aka unsigned int} | %u -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_eh.lo update_eh.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o .libs/update_eh.o structure_dump.cpp: In member function 'void meep::structure::dump(const char*, bool)': structure_dump.cpp:296:46: warning: '_' directive output may be truncated writing 1 byte into a region of size between 0 and 9 [-Wformat-truncation=] @@ -1691,6 +1725,7 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 structure_dump.cpp: In member function 'void meep::structure::load(const char*, bool)': structure_dump.cpp:748:44: warning: '%d' directive output may be truncated writing between 1 and 2 bytes into a region of size between 1 and 10 [-Wformat-truncation=] 748 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); @@ -1708,22 +1743,21 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o structure_dump.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o susceptibility.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o update_eh.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_pols.lo update_pols.cpp -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o vec.lo vec.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o structure.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic.lo step_generic.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mpb.lo mpb.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_pols.lo update_pols.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o vec.lo vec.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o .libs/vec.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meepgeom.lo meepgeom.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic.lo step_generic.cpp +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meepgeom.lo meepgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o .libs/step_generic.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o .libs/meepgeom.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp step_generic.cpp:91: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 91 | PLOOP_OVER_IVECS(gv, is, ie, i) { | @@ -1853,9 +1887,75 @@ meepgeom.cpp:2959: warning: ignoring '#pragma unroll ' [-Wunknown-pragmas] 2959 | #pragma unroll | +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 +meepgeom.cpp: In copy constructor 'meep_geom::geom_epsilon::geom_epsilon(const meep_geom::geom_epsilon&)': +meepgeom.cpp:711:1: warning: base class 'class meep::material_function' should be explicitly initialized in the copy constructor [-Wextra] + 711 | geom_epsilon::geom_epsilon(const geom_epsilon &geps1) { + | ^~~~~~~~~~~~ +meepgeom.cpp: In function 'std::complex meep_geom::get_material_gradient(const meep::vec&, meep::component, meep::component, std::complex, double, geom_epsilon*, meep::grid_volume&, double, double*, int)': +meepgeom.cpp:2685:46: warning: unused variable 'dA_du' [-Wunused-variable] + 2685 | std::complex row_1[3], row_2[3], dA_du[3]; + | ^~~~~ +meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient(double*, size_t, size_t, std::vector, std::vector, double*, double, meep::grid_volume&, meep::volume&, geom_epsilon*, double)': +meepgeom.cpp:2838:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 2838 | for (int i = 0; i < ng * nf; i++) { + | ~~^~~~~~~~~ +meepgeom.cpp:2867:52: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] + 2867 | meep::abort("The number of adjoint chunks (%ld) is not equal to the number of forward chunks " + | ~~^ + | | + | long int + | %d + 2868 | "(%ld).\n", + 2869 | c_adjoint_dft_chunks.size(), c_forward_dft_chunks.size()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ + | | + | std::vector::size_type {aka unsigned int} +meepgeom.cpp:2868:23: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] + 2868 | "(%ld).\n", + | ~~^ + | | + | long int + | %d + 2869 | c_adjoint_dft_chunks.size(), c_forward_dft_chunks.size()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ + | | + | std::vector::size_type {aka unsigned int} +meepgeom.cpp:2895:49: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 2895 | if ((num_f_chunks == 0) || (cur_chunk >= num_f_chunks)) continue; + | ~~~~~~~~~~^~~~~~~~~~~~~~~ +meepgeom.cpp:2962:35: warning: comparison of integer expressions of different signedness: 'ptrdiff_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 2962 | fwd1 = ((fwd1_idx >= fwd_chunk->N) || (fwd1_idx < 0)) + | ~~~~~~~~~^~~~~~~~~~~~~~~ +meepgeom.cpp:2966:35: warning: comparison of integer expressions of different signedness: 'ptrdiff_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 2966 | fwd2 = ((fwd2_idx >= fwd_chunk->N) || (fwd2_idx < 0)) + | ~~~~~~~~~^~~~~~~~~~~~~~~ +meepgeom.cpp:3000:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 3000 | for (int ii = 0; ii < adjoint_dft_chunks[i].size(); ii++) { + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +meepgeom.cpp:2832:88: warning: unused parameter 'where' [-Wunused-parameter] + 2832 | double scalegrad, meep::grid_volume &gv, meep::volume &where, + | ~~~~~~~~~~~~~~^~~~~ +meepgeom.cpp: In function 'std::complex meep_geom::cond_cmp(meep::component, const meep::vec&, double, geom_epsilon*)': +meepgeom.cpp:2617:1: warning: control reaches end of non-void function [-Wreturn-type] + 2617 | } + | ^ +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o .libs/GDSIIgeom.o -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o .libs/step_generic_stride1.o +meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient_point(double*, vector3, double, geom_epsilon*, meep::component, meep::component, std::complex, std::complex, double, meep::grid_volume&, double)': +meepgeom.cpp:2824:28: warning: 'kind' may be used uninitialized [-Wmaybe-uninitialized] + 2824 | add_interpolate_weights(p.x, p.y, p.z, vcur, sz.x, sz.y, sz.z, 1, scalegrad, ucur, kind, uval, + | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 2825 | vector3_to_vec(p), geps, adjoint_c, forward_c, fwd, adj, freq, gv, tol); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +meepgeom.cpp:2760:7: note: 'kind' was declared here + 2760 | int kind; + | ^~~~ step_generic_stride1.cpp:93: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 93 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | @@ -2024,73 +2124,9 @@ 585 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] = g[i]; } | step_generic_stride1.cpp:585: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] -meepgeom.cpp: In copy constructor 'meep_geom::geom_epsilon::geom_epsilon(const meep_geom::geom_epsilon&)': -meepgeom.cpp:711:1: warning: base class 'class meep::material_function' should be explicitly initialized in the copy constructor [-Wextra] - 711 | geom_epsilon::geom_epsilon(const geom_epsilon &geps1) { - | ^~~~~~~~~~~~ -meepgeom.cpp: In function 'std::complex meep_geom::get_material_gradient(const meep::vec&, meep::component, meep::component, std::complex, double, geom_epsilon*, meep::grid_volume&, double, double*, int)': -meepgeom.cpp:2685:46: warning: unused variable 'dA_du' [-Wunused-variable] - 2685 | std::complex row_1[3], row_2[3], dA_du[3]; - | ^~~~~ -meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient(double*, size_t, size_t, std::vector, std::vector, double*, double, meep::grid_volume&, meep::volume&, geom_epsilon*, double)': -meepgeom.cpp:2838:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 2838 | for (int i = 0; i < ng * nf; i++) { - | ~~^~~~~~~~~ -meepgeom.cpp:2867:52: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] - 2867 | meep::abort("The number of adjoint chunks (%ld) is not equal to the number of forward chunks " - | ~~^ - | | - | long int - | %d - 2868 | "(%ld).\n", - 2869 | c_adjoint_dft_chunks.size(), c_forward_dft_chunks.size()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ - | | - | std::vector::size_type {aka unsigned int} -meepgeom.cpp:2868:23: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] - 2868 | "(%ld).\n", - | ~~^ - | | - | long int - | %d - 2869 | c_adjoint_dft_chunks.size(), c_forward_dft_chunks.size()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ - | | - | std::vector::size_type {aka unsigned int} -meepgeom.cpp:2895:49: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 2895 | if ((num_f_chunks == 0) || (cur_chunk >= num_f_chunks)) continue; - | ~~~~~~~~~~^~~~~~~~~~~~~~~ -meepgeom.cpp:2962:35: warning: comparison of integer expressions of different signedness: 'ptrdiff_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 2962 | fwd1 = ((fwd1_idx >= fwd_chunk->N) || (fwd1_idx < 0)) - | ~~~~~~~~~^~~~~~~~~~~~~~~ -meepgeom.cpp:2966:35: warning: comparison of integer expressions of different signedness: 'ptrdiff_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 2966 | fwd2 = ((fwd2_idx >= fwd_chunk->N) || (fwd2_idx < 0)) - | ~~~~~~~~~^~~~~~~~~~~~~~~ -meepgeom.cpp:3000:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 3000 | for (int ii = 0; ii < adjoint_dft_chunks[i].size(); ii++) { - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -meepgeom.cpp:2832:88: warning: unused parameter 'where' [-Wunused-parameter] - 2832 | double scalegrad, meep::grid_volume &gv, meep::volume &where, - | ~~~~~~~~~~~~~~^~~~~ -meepgeom.cpp: In function 'std::complex meep_geom::cond_cmp(meep::component, const meep::vec&, double, geom_epsilon*)': -meepgeom.cpp:2617:1: warning: control reaches end of non-void function [-Wreturn-type] - 2617 | } - | ^ -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 -meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient_point(double*, vector3, double, geom_epsilon*, meep::component, meep::component, std::complex, std::complex, double, meep::grid_volume&, double)': -meepgeom.cpp:2824:28: warning: 'kind' may be used uninitialized [-Wmaybe-uninitialized] - 2824 | add_interpolate_weights(p.x, p.y, p.z, vcur, sz.x, sz.y, sz.z, 1, scalegrad, ucur, kind, uval, - | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 2825 | vector3_to_vec(p), geps, adjoint_c, forward_c, fwd, adj, freq, gv, tol); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -meepgeom.cpp:2760:7: note: 'kind' was declared here - 2760 | int kind; - | ^~~~ -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 -libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o meepgeom.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmeep.la -rpath /usr/lib/i386-linux-gnu array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo fields_dump.lo fix_boundary_sources.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo material_data.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo meepgeom.lo GDSIIgeom.lo step_generic_stride1.lo support/libsupport.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmeep.la -rpath /usr/lib/i386-linux-gnu array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo fields_dump.lo fix_boundary_sources.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo material_data.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo meepgeom.lo GDSIIgeom.lo step_generic_stride1.lo support/libsupport.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/13/crtbeginS.o .libs/array_slice.o .libs/anisotropic_averaging.o .libs/bands.o .libs/boundaries.o .libs/bicgstab.o .libs/casimir.o .libs/cw_fields.o .libs/dft.o .libs/dft_ldos.o .libs/energy_and_flux.o .libs/fields.o .libs/fields_dump.o .libs/fix_boundary_sources.o .libs/loop_in_chunks.o .libs/h5fields.o .libs/h5file.o .libs/initialize.o .libs/integrate.o .libs/integrate2.o .libs/material_data.o .libs/monitor.o .libs/mympi.o .libs/multilevel-atom.o .libs/near2far.o .libs/output_directory.o .libs/random.o .libs/sources.o .libs/step.o .libs/step_db.o .libs/stress.o .libs/structure.o .libs/structure_dump.o .libs/susceptibility.o .libs/time.o .libs/update_eh.o .libs/mpb.o .libs/update_pols.o .libs/vec.o .libs/step_generic.o .libs/meepgeom.o .libs/GDSIIgeom.o .libs/step_generic_stride1.o -Wl,--whole-archive support/.libs/libsupport.a -Wl,--no-whole-archive -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -lfftw3 -lgfortran -lquadmath -L/usr/lib/i386-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/13/crtendS.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,libmeep.so.30 -o .libs/libmeep.so.30.0.0 libtool: link: (cd ".libs" && rm -f "libmeep.so.30" && ln -s "libmeep.so.30.0.0" "libmeep.so.30") libtool: link: (cd ".libs" && rm -f "libmeep.so" && ln -s "libmeep.so.30.0.0" "libmeep.so") @@ -2118,14 +2154,14 @@ ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; compiled /build/reproducible-path/meep-mpi-default-1.25.0/debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-4-4.6/usr/share/libctl/base/include.scm.go -swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i +cp -f /usr/share/libctl/base/main.c main.cpp +cp -f /usr/share/libctl/utils/geom.c geom.cpp +gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; compiled /build/reproducible-path/meep-mpi-default-1.25.0/debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-4-4.6/usr/share/libctl/base/include.scm.go -cp -f /usr/share/libctl/base/main.c main.cpp -cp -f /usr/share/libctl/utils/geom.c geom.cpp -gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl +swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i patch -p0 meep_wrap.cxx < ./meep_wrap.patch patching file meep_wrap.cxx Hunk #1 succeeded at 813 (offset 62 lines). @@ -2137,7 +2173,6 @@ mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep_wrap.o `test -f 'meep_wrap.cxx' || echo './'`meep_wrap.cxx mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-main.o `test -f 'main.cpp' || echo './'`main.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-geom.o `test -f 'geom.cpp' || echo './'`geom.cpp -mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp geom.cpp:22: warning: "_GNU_SOURCE" redefined 22 | #define _GNU_SOURCE | @@ -2154,6 +2189,11 @@ main.cpp:205:45: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp +geom.cpp: In function 'vector3 normal_to_prism(ctlio::prism*, vector3)': +geom.cpp:2357:11: warning: variable 'axisp' set but not used [-Wunused-but-set-variable] + 2357 | vector3 axisp = vector3_scale(height, zhatp); + | ^~~~~ In file included from ctl-io.h:7, from ctl-io.cpp:7: ctl-io.cpp: In function 'void ctlio::export_external_functions()': @@ -2175,10 +2215,6 @@ ctl-io.cpp:2234:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2234 | gh_new_procedure("point-in-object?-aux", (SCM (*)()) point_in_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -geom.cpp: In function 'vector3 normal_to_prism(ctlio::prism*, vector3)': -geom.cpp:2357:11: warning: variable 'axisp' set but not used [-Wunused-but-set-variable] - 2357 | vector3 axisp = vector3_scale(height, zhatp); - | ^~~~~ In function 'bool get_front_object(const meep::volume&, geom_box_tree, vector3&, const ctlio::geometric_object**, vector3&, ctlio::material_type&, ctlio::material_type&)', inlined from 'virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)' at structure.cpp:618:40: structure.cpp:581:10: warning: 'mat1' may be used uninitialized [-Wmaybe-uninitialized] @@ -2209,7 +2245,7 @@ meep_wrap.cxx:36145:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36145 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/.libs/libmeep.so -lctl -lguile-3.0 -lgc -lpthread -ldl -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0/scheme' make[3]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0/scheme' @@ -2225,7 +2261,7 @@ fi make all-am make[4]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/python' -/bin/bash ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cxx' || echo './'`meep-python.cxx +/bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cxx' || echo './'`meep-python.cxx libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cxx -fPIC -DPIC -o .libs/_meep_la-meep-python.o meep-python.cxx: In function 'meep::structure* create_structure(vector3, std::vector, std::vector, std::vector, std::vector, std::vector, meep::grid_volume&, const meep::boundary_region&, const meep::symmetry&, int, double, bool, double, int, geometric_object_list, vector3, bool, meep_geom::material_type, meep_geom::absorber_list, meep_geom::material_type_list, bool, bool, meep::structure*, bool, const meep::binary_partition*)': meep-python.cxx:7486:62: warning: unused parameter 'alist' [-Wunused-parameter] @@ -2296,7 +2332,7 @@ 115 | static PyObject *py_volume_object() { | ^~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cxx -fPIC -DPIC -o _meep_la-meep-python.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.11/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.11/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/13/crtbeginS.o .libs/_meep_la-meep-python.o -Wl,-rpath -Wl,/build/reproducible-path/meep-mpi-default-1.25.0/src/.libs ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lquadmath -L/usr/lib/i386-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/13/crtendS.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,_meep.so.30 -o .libs/_meep.so.30.0.0 libtool: link: (cd ".libs" && rm -f "_meep.so.30" && ln -s "_meep.so.30.0.0" "_meep.so.30") libtool: link: (cd ".libs" && rm -f "_meep.so" && ln -s "_meep.so.30.0.0" "_meep.so") @@ -2346,94 +2382,94 @@ make aniso_disp bench bragg_transmission convergence_cyl_waveguide cylindrical dump_load flux harmonics integrate known_results near2far one_dimensional physical stress_tensor symmetry three_d two_dimensional 2D_convergence h5test pml pw-source-ll ring-ll cyl-ellipsoid-ll absorber-1d-ll array-slice-ll user-defined-material dft-fields gdsII-3d bend-flux-ll array-metadata make[4]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/tests' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o aniso_disp.o aniso_disp.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o aniso_disp aniso_disp.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o aniso_disp aniso_disp.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/aniso_disp aniso_disp.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bench.o bench.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o bench bench.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o bench bench.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/bench bench.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bragg_transmission.o bragg_transmission.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o bragg_transmission bragg_transmission.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o bragg_transmission bragg_transmission.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/bragg_transmission bragg_transmission.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o convergence_cyl_waveguide.o convergence_cyl_waveguide.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cylindrical.o cylindrical.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o cylindrical cylindrical.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o cylindrical cylindrical.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/cylindrical cylindrical.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dump_load.o dump_load.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o dump_load dump_load.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o dump_load dump_load.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/dump_load dump_load.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o flux.o flux.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o flux flux.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o flux flux.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/flux flux.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o harmonics.o harmonics.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o harmonics harmonics.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o harmonics harmonics.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/harmonics harmonics.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o integrate.o integrate.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o integrate integrate.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o integrate integrate.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/integrate integrate.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o known_results.o known_results.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o known_results known_results.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o known_results known_results.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/known_results known_results.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o near2far.o near2far.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o near2far near2far.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o near2far near2far.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/near2far near2far.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o one_dimensional.o one_dimensional.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o one_dimensional one_dimensional.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o one_dimensional one_dimensional.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/one_dimensional one_dimensional.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o physical.o physical.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o physical physical.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o physical physical.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/physical physical.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o stress_tensor.o stress_tensor.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o stress_tensor stress_tensor.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o stress_tensor stress_tensor.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/stress_tensor stress_tensor.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o symmetry.o symmetry.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o symmetry symmetry.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o symmetry symmetry.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/symmetry symmetry.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o three_d.o three_d.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o three_d three_d.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o three_d three_d.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/three_d three_d.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o two_dimensional.o two_dimensional.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o two_dimensional two_dimensional.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o two_dimensional two_dimensional.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/two_dimensional two_dimensional.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o 2D_convergence.o 2D_convergence.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o 2D_convergence 2D_convergence.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o 2D_convergence 2D_convergence.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/2D_convergence 2D_convergence.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o h5test.o h5test.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o h5test h5test.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o h5test h5test.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/h5test h5test.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o pml.o pml.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o pml pml.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o pml pml.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/pml pml.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o pw-source-ll.o pw-source-ll.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o pw-source-ll pw-source-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o pw-source-ll pw-source-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/pw-source-ll pw-source-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o ring-ll.o ring-ll.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o ring-ll ring-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o ring-ll ring-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/ring-ll ring-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cyl-ellipsoid-ll.o cyl-ellipsoid-ll.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o cyl-ellipsoid-ll cyl-ellipsoid-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o cyl-ellipsoid-ll cyl-ellipsoid-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/cyl-ellipsoid-ll cyl-ellipsoid-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o absorber-1d-ll.o absorber-1d-ll.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o absorber-1d-ll absorber-1d-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o absorber-1d-ll absorber-1d-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/absorber-1d-ll absorber-1d-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array-slice-ll.o array-slice-ll.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o array-slice-ll array-slice-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o array-slice-ll array-slice-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/array-slice-ll array-slice-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o user-defined-material.o user-defined-material.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o user-defined-material user-defined-material.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o user-defined-material user-defined-material.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/user-defined-material user-defined-material.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft-fields.o dft-fields.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o dft-fields dft-fields.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o dft-fields dft-fields.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/dft-fields dft-fields.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o gdsII-3d.o gdsII-3d.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o gdsII-3d gdsII-3d.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o gdsII-3d gdsII-3d.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/gdsII-3d gdsII-3d.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bend-flux-ll.o bend-flux-ll.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o bend-flux-ll bend-flux-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o bend-flux-ll bend-flux-ll.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/bend-flux-ll bend-flux-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array-metadata.o array-metadata.cpp -/bin/bash ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o array-metadata array-metadata.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath +/bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o array-metadata array-metadata.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o .libs/array-metadata array-metadata.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0/tests' make check-TESTS @@ -2602,7 +2638,7 @@ make[5]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' make[6]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/src' /usr/bin/mkdir -p '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu' - /bin/bash ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu' + /bin/sh ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/libmeep.so.30.0.0 /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu/libmeep.so.30.0.0 libtool: install: (cd /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libmeep.so.30.0.0 libmeep.so.30 || { rm -f libmeep.so.30 && ln -s libmeep.so.30.0.0 libmeep.so.30; }; }) libtool: install: (cd /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libmeep.so.30.0.0 libmeep.so || { rm -f libmeep.so && ln -s libmeep.so.30.0.0 libmeep.so; }; }) @@ -2632,7 +2668,7 @@ make[4]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/scheme' make[5]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/scheme' /usr/bin/mkdir -p '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/bin' - /bin/bash ../libtool --mode=install /usr/bin/install -c meep '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/bin' + /bin/sh ../libtool --mode=install /usr/bin/install -c meep '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/bin' libtool: warning: '../src/libmeep.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/meep /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/bin/meep /usr/bin/mkdir -p '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/share/meep' @@ -2646,9 +2682,9 @@ make[4]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/python' make[5]: Entering directory '/build/reproducible-path/meep-mpi-default-1.25.0/python' /usr/bin/mkdir -p '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' - /bin/bash ../libtool --mode=install /usr/bin/install -c _meep.la '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' + /bin/sh ../libtool --mode=install /usr/bin/install -c _meep.la '/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' libtool: warning: relinking '_meep.la' -libtool: install: (cd /build/reproducible-path/meep-mpi-default-1.25.0/python; /bin/bash "/build/reproducible-path/meep-mpi-default-1.25.0/libtool" --tag CXX --mode=relink mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.11/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath -inst-prefix-dir /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp) +libtool: install: (cd /build/reproducible-path/meep-mpi-default-1.25.0/python; /bin/sh "/build/reproducible-path/meep-mpi-default-1.25.0/libtool" --tag CXX --mode=relink mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-mpi-default-1.25.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.11/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath -inst-prefix-dir /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp) libtool: relink: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/13/crtbeginS.o .libs/_meep_la-meep-python.o -L/build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/i386-linux-gnu -L/usr/lib/i386-linux-gnu -lmeep -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lquadmath -L/usr/lib/i386-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/13/crtendS.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,_meep.so.30 -o .libs/_meep.so.30.0.0 libtool: install: /usr/bin/install -c .libs/_meep.so.30.0.0T /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30.0.0 libtool: install: (cd /build/reproducible-path/meep-mpi-default-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep && { ln -s -f _meep.so.30.0.0 _meep.so.30 || { rm -f _meep.so.30 && ln -s _meep.so.30.0.0 _meep.so.30; }; }) @@ -2687,1219 +2723,989 @@ make[2]: Leaving directory '/build/reproducible-path/meep-mpi-default-1.25.0' find . -./m4 -./m4/ax_mpi.m4 -./m4/ax_gcc_archflag.m4 -./m4/ax_lapack.m4 -./m4/ax_gcc_x86_cpuid.m4 -./m4/ltversion.m4 -./m4/ax_blas.m4 -./m4/ax_check_compiler_flags.m4 -./m4/ax_cxx_maxopt.m4 -./m4/lt~obsolete.m4 -./m4/pkg.m4 -./m4/ax_compiler_vendor.m4 -./m4/ax_cxx_compile_stdcxx.m4 -./m4/ltoptions.m4 -./m4/ltsugar.m4 -./m4/libtool.m4 -./m4/ax_openmp.m4 -./config.h -./compile -./AUTHORS +./tests +./tests/three_d +./tests/array-metadata +./tests/user-defined-material.cpp +./tests/user-defined-material.o +./tests/dft-fields +./tests/stress_tensor.log +./tests/array-slice-ll-ref.h5 +./tests/gdsII-3d.gds +./tests/near2far.trs +./tests/array-slice-ll.o +./tests/flux.trs +./tests/cylindrical +./tests/2D_convergence.log +./tests/near2far.cpp +./tests/physical.cpp +./tests/dump_load.trs +./tests/two_dimensional.cpp +./tests/pml +./tests/bench.trs +./tests/Makefile.am +./tests/integrate +./tests/near2far +./tests/2D_convergence.o +./tests/aniso_disp.o +./tests/2D_convergence.cpp +./tests/known_results.o +./tests/bragg_transmission.cpp +./tests/stress_tensor.o +./tests/near2far.o +./tests/convergence_cyl_waveguide.o +./tests/bragg_transmission +./tests/h5test.cpp +./tests/three_d.trs +./tests/bend-flux-ll.o +./tests/absorber-1d-ll +./tests/integrate.cpp +./tests/flux +./tests/pml.cpp +./tests/known_results.cpp +./tests/one_dimensional.log +./tests/one_dimensional.o +./tests/bragg_transmission.trs +./tests/aniso_disp +./tests/symmetry.o +./tests/flux.o +./tests/harmonics.trs +./tests/harmonics.o +./tests/2D_convergence.trs +./tests/convergence_cyl_waveguide.cpp +./tests/pw-source-ll +./tests/three_d.cpp +./tests/dump_load.cpp +./tests/bench +./tests/symmetry.trs +./tests/pml.log +./tests/pml.o +./tests/array-slice-ll +./tests/.libs +./tests/.libs/three_d +./tests/.libs/array-metadata +./tests/.libs/dft-fields +./tests/.libs/cylindrical +./tests/.libs/pml +./tests/.libs/integrate +./tests/.libs/near2far +./tests/.libs/bragg_transmission +./tests/.libs/absorber-1d-ll +./tests/.libs/flux +./tests/.libs/aniso_disp +./tests/.libs/pw-source-ll +./tests/.libs/bench +./tests/.libs/array-slice-ll +./tests/.libs/h5test +./tests/.libs/physical +./tests/.libs/one_dimensional +./tests/.libs/dump_load +./tests/.libs/known_results +./tests/.libs/2D_convergence +./tests/.libs/gdsII-3d +./tests/.libs/two_dimensional +./tests/.libs/cyl-ellipsoid-ll +./tests/.libs/stress_tensor +./tests/.libs/harmonics +./tests/.libs/ring-ll +./tests/.libs/convergence_cyl_waveguide +./tests/.libs/symmetry +./tests/.libs/bend-flux-ll +./tests/.libs/user-defined-material +./tests/dump_load.o +./tests/h5test +./tests/array-metadata.o +./tests/physical +./tests/dump_load.log +./tests/flux.log +./tests/flux.cpp +./tests/h5test.o +./tests/one_dimensional +./tests/gdsII-3d.o +./tests/harmonics.log +./tests/physical.o +./tests/one_dimensional.trs +./tests/bench.cpp +./tests/harmonics.cpp +./tests/dump_load +./tests/aniso_disp.cpp +./tests/known_results.trs +./tests/known_results +./tests/convergence_cyl_waveguide.trs +./tests/cylindrical.o +./tests/2D_convergence +./tests/h5test.log +./tests/test-suite.log +./tests/integrate.trs +./tests/symmetry.log +./tests/gdsII-3d +./tests/bragg_transmission.o +./tests/two_dimensional +./tests/cylindrical.cpp +./tests/pw-source-ll.cpp +./tests/cyl-ellipsoid-ll +./tests/symmetry.cpp +./tests/dft-fields.o +./tests/integrate.o +./tests/convergence_cyl_waveguide.log +./tests/physical.trs +./tests/stress_tensor +./tests/two_dimensional.trs +./tests/one_dimensional.cpp +./tests/cyl-ellipsoid-eps-ref.h5 +./tests/stress_tensor.trs +./tests/bench.o +./tests/cylindrical.trs +./tests/pml.trs +./tests/h5test.trs +./tests/near2far.log +./tests/dft-fields.cpp +./tests/three_d.o +./tests/Makefile +./tests/array-metadata.cpp +./tests/cyl-ellipsoid.ctl +./tests/harmonics +./tests/ring-ll.o +./tests/absorber-1d-ll.cpp +./tests/ring-ll +./tests/physical.log +./tests/three_d.log +./tests/stress_tensor.cpp +./tests/aniso_disp.log +./tests/integrate.log +./tests/bragg_transmission.log +./tests/pw-source-ll.o +./tests/ring-ll.cpp +./tests/gdsII-3d.cpp +./tests/two_dimensional.log +./tests/aniso_disp.trs +./tests/convergence_cyl_waveguide +./tests/bend-flux-ll.cpp +./tests/symmetry +./tests/known_results.log +./tests/array-slice-ll.cpp +./tests/bend-flux-ll +./tests/two_dimensional.o +./tests/bench.log +./tests/cylindrical.log +./tests/absorber-1d-ll.o +./tests/Makefile.in +./tests/cyl-ellipsoid-ll.cpp +./tests/cyl-ellipsoid-ll.o +./tests/user-defined-material +./libpympb +./libpympb/pympb.hpp +./libpympb/Makefile.am +./libpympb/pympb.cpp +./libpympb/Makefile +./libpympb/Makefile.in +./libtool +./index.md +./meep-pkgconfig.in +./README.md +./LICENSE +./.gitattributes +./Makefile.am ./src -./src/structure_dump.o -./src/fields.lo -./src/step_db.o -./src/casimir.cpp -./src/sphere_quad -./src/dft.cpp -./src/h5fields.o -./src/multilevel-atom.o -./src/bicgstab.o -./src/h5fields.cpp +./src/monitor.lo ./src/initialize.lo -./src/near2far.lo -./src/sources.lo -./src/bands.o +./src/update_eh.cpp +./src/step.o +./src/sphere-quad.h ./src/libmeep.la -./src/casimir.lo -./src/susceptibility.lo +./src/sources.o +./src/mympi.cpp +./src/dft.lo +./src/fix_boundary_sources.cpp +./src/boundaries.lo ./src/array_slice.cpp -./src/step_generic.lo -./src/time.o -./src/bicgstab.hpp +./src/structure_dump.o +./src/output_directory.lo +./src/susceptibility.cpp +./src/anisotropic_averaging.o +./src/vec.o +./src/mpb.o +./src/anisotropic_averaging.lo +./src/fix_boundary_sources.o +./src/h5file.o +./src/near2far.cpp +./src/boundaries.cpp +./src/susceptibility.lo ./src/step.lo -./src/sphere-quad.h -./src/bands.cpp -./src/integrate.o +./src/random.cpp +./src/meepgeom.lo +./src/Makefile.am +./src/GDSIIgeom.lo +./src/energy_and_flux.o ./src/integrate.lo -./src/output_directory.o -./src/bands.lo ./src/dft_ldos.o -./src/monitor.lo -./src/material_data.lo -./src/output_directory.lo -./src/fields_dump.cpp -./src/fields.o -./src/mympi.cpp +./src/susceptibility.o +./src/structure_dump.cpp +./src/loop_in_chunks.o ./src/fields_dump.o -./src/GDSIIgeom.cpp -./src/update_eh.o -./src/integrate.cpp -./src/anisotropic_averaging.cpp -./src/step_generic_stride1.cpp -./src/step_generic_stride1.o -./src/material_data.cpp -./src/update_eh.cpp -./src/energy_and_flux.o -./src/array_slice.lo -./src/cw_fields.lo -./src/mympi.o -./src/adjust_verbosity.hpp -./src/dft_ldos.cpp -./src/mympi.lo -./src/meep.hpp -./src/boundaries.lo -./src/energy_and_flux.lo ./src/stress.cpp -./src/structure.o +./src/near2far.o +./src/meep +./src/meep/vec.hpp +./src/meep/mympi.hpp +./src/meep/meep-config.h.in +./src/meep/meep-config.h +./src/integrate.cpp ./src/vec.cpp -./src/h5file.lo -./src/Makefile.in +./src/array_slice.lo ./src/integrate2.cpp -./src/fix_boundary_sources.lo -./src/update_pols.cpp -./src/stress.o -./src/vec.o -./src/boundaries.cpp -./src/structure_dump.lo -./src/fields_dump.lo -./src/step.o -./src/step_db.lo -./src/step_generic.o -./src/fields.cpp -./src/sources.o -./src/meep_internals.hpp -./src/cw_fields.o -./src/meepgeom.o -./src/Makefile -./src/random.o -./src/material_data.hpp -./src/meepgeom.lo -./src/step_generic.cpp -./src/step_db.cpp -./src/Makefile.am -./src/time.cpp -./src/energy_and_flux.cpp -./src/structure_dump.cpp -./src/mpb.cpp -./src/initialize.o -./src/fix_boundary_sources.o -./src/susceptibility.o -./src/bicgstab.cpp -./src/integrate2.lo -./src/GDSIIgeom.o -./src/multilevel-atom.cpp -./src/array_slice.o -./src/update_eh.lo ./src/support -./src/support/mt19937ar.o -./src/support/mt19937ar.lo -./src/support/Makefile.in -./src/support/meep_mt.h -./src/support/Makefile +./src/support/libsupport.la ./src/support/Makefile.am -./src/support/mt19937ar.c ./src/support/.libs -./src/support/.libs/mt19937ar.o -./src/support/.libs/libsupport.a ./src/support/.libs/libsupport.la -./src/support/libsupport.la -./src/structure.lo -./src/h5file.o -./src/monitor.o -./src/boundaries.o -./src/monitor.cpp +./src/support/.libs/libsupport.a +./src/support/.libs/mt19937ar.o +./src/support/mt19937ar.lo +./src/support/Makefile +./src/support/meep_mt.h +./src/support/mt19937ar.c +./src/support/mt19937ar.o +./src/support/Makefile.in +./src/update_pols.lo +./src/material_data.lo +./src/structure_dump.lo +./src/time.o +./src/sources.lo ./src/loop_in_chunks.cpp -./src/meep -./src/meep/vec.hpp -./src/meep/meep-config.h -./src/meep/mympi.hpp -./src/meep/meep-config.h.in -./src/cw_fields.cpp -./src/mpb.lo -./src/structure.cpp -./src/random.lo -./src/output_directory.cpp -./src/h5file.cpp +./src/fields.o +./src/mympi.o +./src/time.lo +./src/multilevel-atom.cpp +./src/casimir.lo +./src/h5fields.cpp +./src/step_generic.o ./src/.libs +./src/.libs/step.o +./src/.libs/libmeep.la +./src/.libs/sources.o ./src/.libs/structure_dump.o -./src/.libs/step_db.o +./src/.libs/anisotropic_averaging.o +./src/.libs/vec.o +./src/.libs/mpb.o +./src/.libs/fix_boundary_sources.o +./src/.libs/h5file.o ./src/.libs/libmeep.so.30 -./src/.libs/h5fields.o -./src/.libs/multilevel-atom.o -./src/.libs/bicgstab.o -./src/.libs/bands.o -./src/.libs/libmeep.la -./src/.libs/time.o -./src/.libs/libmeep.so -./src/.libs/integrate.o -./src/.libs/output_directory.o +./src/.libs/energy_and_flux.o ./src/.libs/dft_ldos.o -./src/.libs/fields.o -./src/.libs/libmeep.a +./src/.libs/susceptibility.o +./src/.libs/loop_in_chunks.o ./src/.libs/fields_dump.o -./src/.libs/update_eh.o -./src/.libs/step_generic_stride1.o -./src/.libs/energy_and_flux.o +./src/.libs/near2far.o +./src/.libs/libmeep.lai +./src/.libs/time.o +./src/.libs/fields.o ./src/.libs/mympi.o -./src/.libs/structure.o -./src/.libs/stress.o -./src/.libs/vec.o -./src/.libs/step.o ./src/.libs/step_generic.o -./src/.libs/sources.o -./src/.libs/cw_fields.o ./src/.libs/meepgeom.o +./src/.libs/step_db.o +./src/.libs/update_eh.o +./src/.libs/output_directory.o +./src/.libs/multilevel-atom.o +./src/.libs/casimir.o +./src/.libs/monitor.o +./src/.libs/structure.o +./src/.libs/cw_fields.o +./src/.libs/h5fields.o ./src/.libs/random.o -./src/.libs/initialize.o -./src/.libs/fix_boundary_sources.o -./src/.libs/susceptibility.o -./src/.libs/GDSIIgeom.o +./src/.libs/update_pols.o +./src/.libs/bands.o +./src/.libs/integrate.o +./src/.libs/stress.o +./src/.libs/step_generic_stride1.o +./src/.libs/libmeep.a +./src/.libs/bicgstab.o ./src/.libs/array_slice.o -./src/.libs/h5file.o -./src/.libs/monitor.o +./src/.libs/integrate2.o +./src/.libs/libmeep.so ./src/.libs/boundaries.o -./src/.libs/libmeep.lai +./src/.libs/libmeep.so.30.0.0 +./src/.libs/GDSIIgeom.o +./src/.libs/initialize.o ./src/.libs/material_data.o ./src/.libs/dft.o -./src/.libs/update_pols.o -./src/.libs/casimir.o -./src/.libs/integrate2.o -./src/.libs/mpb.o -./src/.libs/near2far.o -./src/.libs/libmeep.so.30.0.0 -./src/.libs/loop_in_chunks.o -./src/.libs/anisotropic_averaging.o -./src/material_data.o -./src/dft.o +./src/meep_internals.hpp +./src/step_db.cpp +./src/mympi.lo +./src/structure.lo +./src/bands.lo +./src/casimir.cpp +./src/meepgeom.o +./src/step_db.o +./src/update_eh.o +./src/output_directory.o +./src/time.cpp +./src/dft_ldos.cpp +./src/step_generic_stride1.cpp +./src/multilevel-atom.o +./src/fields_dump.cpp +./src/initialize.cpp +./src/energy_and_flux.lo +./src/bicgstab.hpp +./src/cw_fields.lo +./src/random.lo +./src/h5file.lo +./src/casimir.o +./src/monitor.o +./src/step_generic_stride1.lo +./src/structure.o +./src/cw_fields.o +./src/sphere_quad +./src/h5fields.o +./src/random.o +./src/h5file.cpp +./src/structure.cpp +./src/energy_and_flux.cpp ./src/update_pols.o -./src/dft_ldos.lo +./src/bands.cpp +./src/bands.o +./src/fix_boundary_sources.lo +./src/integrate.o +./src/stress.o +./src/integrate2.lo +./src/monitor.cpp +./src/step_generic_stride1.o +./src/bicgstab.o +./src/stress.lo +./src/step_db.lo +./src/dft.cpp +./src/fields_dump.lo +./src/array_slice.o ./src/loop_in_chunks.lo -./src/casimir.o +./src/Makefile +./src/step_generic.lo +./src/near2far.lo ./src/integrate2.o -./src/susceptibility.cpp -./src/mpb.o -./src/dft.lo -./src/near2far.cpp +./src/step.cpp +./src/boundaries.o +./src/GDSIIgeom.cpp +./src/GDSIIgeom.o ./src/vec.lo -./src/sources.cpp -./src/fix_boundary_sources.cpp -./src/update_pols.lo +./src/bicgstab.cpp ./src/h5fields.lo +./src/update_eh.lo ./src/sphere-quad.o -./src/initialize.cpp -./src/GDSIIgeom.lo -./src/near2far.o +./src/multilevel-atom.lo +./src/material_data.hpp +./src/material_data.cpp +./src/mpb.cpp +./src/step_generic.cpp +./src/mpb.lo +./src/meep.hpp +./src/initialize.o +./src/update_pols.cpp ./src/sphere-quad.cpp -./src/random.cpp -./src/loop_in_chunks.o -./src/stress.lo -./src/step.cpp +./src/adjust_verbosity.hpp +./src/anisotropic_averaging.cpp +./src/material_data.o +./src/sources.cpp +./src/dft_ldos.lo +./src/meepgeom.hpp +./src/fields.lo +./src/cw_fields.cpp +./src/output_directory.cpp +./src/Makefile.in +./src/fields.cpp ./src/bicgstab.lo -./src/multilevel-atom.lo -./src/anisotropic_averaging.lo -./src/time.lo ./src/meepgeom.cpp -./src/step_generic_stride1.lo -./src/meepgeom.hpp -./src/anisotropic_averaging.o -./stamp-h1 +./src/dft.o +./TODO +./.sourcery.yaml +./config.log ./aclocal.m4 +./.gitignore +./.flake8 +./autogen.sh +./config.status +./meep.pc +./AUTHORS +./m4 +./m4/libtool.m4 +./m4/ax_cxx_maxopt.m4 +./m4/ax_check_compiler_flags.m4 +./m4/ax_openmp.m4 +./m4/ax_lapack.m4 +./m4/ax_mpi.m4 +./m4/ax_cxx_compile_stdcxx.m4 +./m4/ltversion.m4 +./m4/ax_gcc_archflag.m4 +./m4/ltsugar.m4 +./m4/pkg.m4 +./m4/ax_blas.m4 +./m4/ax_compiler_vendor.m4 +./m4/lt~obsolete.m4 +./m4/ltoptions.m4 +./m4/ax_gcc_x86_cpuid.m4 +./configure.ac +./scheme +./scheme/meep.i +./scheme/meep-ctl-io.o +./scheme/meep_swig_bug_workaround.i +./scheme/meep.cpp +./scheme/meep.scm.in +./scheme/casimir.scm +./scheme/Makefile.am +./scheme/meep +./scheme/meep.scm +./scheme/main.cpp +./scheme/meep_enum_renames.i +./scheme/.libs +./scheme/.libs/meep +./scheme/meep-structure.o +./scheme/examples +./scheme/examples/binary_grating_n2f.ctl +./scheme/examples/zone-plate.ctl +./scheme/examples/ring.ctl +./scheme/examples/absorbed-power-density.ctl +./scheme/examples/binary_grating_oblique.ctl +./scheme/examples/finite_grating.ctl +./scheme/examples/metasurface_lens_farfield.ctl +./scheme/examples/material-dispersion.ctl +./scheme/examples/refl-angular-kz2d.ctl +./scheme/examples/oblique-source.ctl +./scheme/examples/binary_grating_phasemap.ctl +./scheme/examples/refl-angular.ctl +./scheme/examples/mode-coeffs.ctl +./scheme/examples/solve-cw.ctl +./scheme/examples/cavity-farfield.ctl +./scheme/examples/perturbation-theory-2d.ctl +./scheme/examples/ring-cyl.ctl +./scheme/examples/holey-wvg-cavity.ctl +./scheme/examples/parallel-wvgs-mpb.ctl +./scheme/examples/multilevel-atom.ctl +./scheme/examples/mie-scattering.ctl +./scheme/examples/metal-cavity-ldos.ctl +./scheme/examples/metasurface_lens_phasemap.ctl +./scheme/examples/bend-flux.ctl +./scheme/examples/binary_grating.ctl +./scheme/examples/faraday-rotation.ctl +./scheme/examples/holey-wvg-bands.ctl +./scheme/examples/parallel-wvgs-force.ctl +./scheme/examples/mode-decomposition.ctl +./scheme/examples/perturbation-theory.ctl +./scheme/examples/wvg_src.ctl +./scheme/examples/antenna-radiation.ctl +./scheme/examples/stochastic-emitter.ctl +./scheme/examples/gaussian-beam.ctl +./scheme/examples/pw-source.ctl +./scheme/examples/refl-quartz.ctl +./scheme/examples/group-velocity.ctl +./scheme/examples/3rd-harm-1d.ctl +./scheme/examples/cherenkov-radiation.ctl +./scheme/examples/straight-waveguide.ctl +./scheme/examples/cylinder-cross-section.ctl +./scheme/examples/chirped-pulse.ctl +./scheme/examples/differential-cross-section.ctl +./scheme/examples/bent-waveguide.ctl +./scheme/examples/oblique-planewave.ctl +./scheme/examples/polarization_grating.ctl +./scheme/meep-enums.scm +./scheme/meep-main.o +./scheme/structure.cpp +./scheme/materials.scm +./scheme/meep_wrap.patch +./scheme/ctl-io.cpp +./scheme/ctl-io.h +./scheme/meep-geom.o +./scheme/meep_wrap.cxx.orig +./scheme/ctl-io.i +./scheme/meep_renames.i +./scheme/meep_wrap.cxx +./scheme/Makefile +./scheme/geom.cpp +./scheme/meep-ctl-swig.hpp +./scheme/meep_wrap.cxx.bak +./scheme/meep-ctl-const.hpp +./scheme/meep-ctl.hpp +./scheme/meep-meep.o +./scheme/meep_op_renames.i +./scheme/meep-meep_wrap.o +./scheme/Makefile.in +./codemeta.json +./.mailmap +./monkeytype.sqlite3 ./python -./python/source.py -./python/mpb_data.py -./python/meep-python.cxx -./python/examples -./python/examples/media -./python/examples/media/holey-wvg-bands-0.4-0.3175.mp4 -./python/examples/media/visualization_demo.gif -./python/examples/media/ring_simple.mp4 -./python/examples/media/hole-wvg-cavity-res.mp4 -./python/examples/media/holey-wvg-bands-0.1-0.4811.mp4 -./python/examples/media/visualization_out_plane.mp4 -./python/examples/media/oblique-source-normal.mp4 -./python/examples/media/visualization_normalize.mp4 -./python/examples/media/ring_large.mp4 -./python/examples/media/bent_waveguide.mp4 -./python/examples/media/holey-wvg-bands-0.25-0.2506.mp4 -./python/examples/media/holey-wvg-bands-0.4-0.1896.mp4 -./python/examples/media/ring_mid.mp4 -./python/examples/media/visualization_demo.mp4 -./python/examples/media/oblique-source-eig.mp4 -./python/examples/media/hole-wvg-cavity.mp4 -./python/examples/media/holey-wvg-bands-0.3-0.8838.mp4 -./python/examples/media/straight_waveguide.mp4 -./python/examples/pw-source.py -./python/examples/zone_plate.py -./python/examples/absorbed_power_density.ipynb -./python/examples/binary_grating_n2f.ipynb -./python/examples/ring-cyl.py -./python/examples/gaussian-beam.py -./python/examples/3rd-harm-1d.ipynb -./python/examples/bend-flux.py -./python/examples/cylinder_cross_section.py -./python/examples/binary_grating_phasemap.py -./python/examples/cavity-farfield.ipynb -./python/examples/binary_grating.py -./python/examples/straight-waveguide.ipynb -./python/examples/solve-cw.ipynb -./python/examples/extraction_eff_ldos.py -./python/examples/polarization_grating.ipynb -./python/examples/ring.py -./python/examples/cyl-ellipsoid.py -./python/examples/absorbed_power_density.py -./python/examples/mie_scattering.py -./python/examples/refl-quartz.ipynb -./python/examples/planar_cavity_ldos.py -./python/examples/oblique-planewave.py -./python/examples/absorber-1d.py -./python/examples/stochastic_emitter.ipynb -./python/examples/ring_gds.py -./python/examples/holey-wvg-bands.py -./python/examples/binary_grating_n2f.py -./python/examples/parallel-wvgs-force.ipynb -./python/examples/refl-angular.py -./python/examples/binary_grating_phasemap.ipynb -./python/examples/perturbation_theory_2d.py -./python/examples/ring-mode-overlap.py -./python/examples/mpb_sq_rods.py -./python/examples/wvg-src.py -./python/examples/mie_scattering.ipynb -./python/examples/grating2d_triangular_lattice.py -./python/examples/coupler.py -./python/examples/eps_fit_lorentzian.py -./python/examples/bent-waveguide.ipynb -./python/examples/antenna-radiation.ipynb -./python/examples/parallel-wvgs-force.py -./python/examples/finite_grating.ipynb -./python/examples/mpb_bragg_sine.py -./python/examples/bent-waveguide.py -./python/examples/binary_grating.ipynb -./python/examples/refl-angular-kz2d.py -./python/examples/ring.ipynb -./python/examples/binary_grating_oblique.py -./python/examples/mode-decomposition.py -./python/examples/parallel-wvgs-mpb.py -./python/examples/oblique-planewave.ipynb -./python/examples/README.md -./python/examples/refl-quartz.py -./python/examples/mpb_tri_rods.py -./python/examples/metal-cavity-ldos.ipynb -./python/examples/stochastic_emitter.py -./python/examples/oblique-source.ipynb -./python/examples/coupler.gds -./python/examples/bend-flux.ipynb -./python/examples/mpb_honey_rods.py -./python/examples/multilevel-atom.py -./python/examples/perturbation_theory.ipynb -./python/examples/coupler.ipynb -./python/examples/metasurface_lens.py -./python/examples/differential_cross_section.ipynb -./python/examples/mpb_diamond.py -./python/examples/antenna_pec_ground_plane.py -./python/examples/finite_grating.py -./python/examples/mpb_bragg.py -./python/examples/chirped_pulse.py -./python/examples/differential_cross_section.py -./python/examples/faraday-rotation.py -./python/examples/holey-wvg-cavity.py -./python/examples/mode-decomposition.ipynb -./python/examples/cavity_arrayslice.py -./python/examples/holey-wvg-cavity.ipynb -./python/examples/mpb_strip.py -./python/examples/straight-waveguide.py -./python/examples/diffracted_planewave.py -./python/examples/oblique-source.py -./python/examples/phase_in_material.py -./python/examples/mpb_line_defect.py -./python/examples/metasurface_lens.ipynb -./python/examples/3rd-harm-1d.py -./python/examples/material-dispersion.py -./python/examples/adjoint_optimization -./python/examples/adjoint_optimization/04-Splitter.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints -./python/examples/adjoint_optimization/.ipynb_checkpoints/04-Splitter-checkpoint.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints/05-Near2Far-checkpoint.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints/06-Near2Far-Epigraph-checkpoint.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints/02-Waveguide_Bend-checkpoint.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints/01-Introduction-checkpoint.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints/03-Filtered_Waveguide_Bend-checkpoint.ipynb -./python/examples/adjoint_optimization/.ipynb_checkpoints/Bend Minimax-checkpoint.ipynb -./python/examples/adjoint_optimization/Fourier-Bend.ipynb -./python/examples/adjoint_optimization/05-Near2Far.ipynb -./python/examples/adjoint_optimization/01-Introduction.ipynb -./python/examples/adjoint_optimization/02-Waveguide_Bend.ipynb -./python/examples/adjoint_optimization/03-Filtered_Waveguide_Bend.ipynb -./python/examples/adjoint_optimization/06-Near2Far-Epigraph.ipynb -./python/examples/adjoint_optimization/Fourier-Metalens.ipynb -./python/examples/adjoint_optimization/Bend Minimax.ipynb -./python/examples/zone_plate.ipynb -./python/examples/stochastic_emitter_reciprocity.py -./python/examples/cavity-farfield.py -./python/examples/mpb_hole_slab.py -./python/examples/metal-cavity-ldos.py -./python/examples/refl-angular.ipynb -./python/examples/cherenkov-radiation.py -./python/examples/cylinder_cross_section.ipynb -./python/examples/mpb_tri_holes.py -./python/examples/holey-wvg-bands.ipynb -./python/examples/mpb_tutorial.py -./python/examples/polarization_grating.py -./python/examples/stochastic_emitter_line.py -./python/examples/antenna-radiation.py -./python/examples/binary_grating_oblique.ipynb -./python/examples/perturbation_theory.py -./python/examples/mpb_data_analysis.py -./python/examples/solve-cw.py -./python/meep-python.hpp -./python/adjoint -./python/adjoint/optimization_problem.py -./python/adjoint/basis.py -./python/adjoint/connectivity.py -./python/adjoint/utils.py -./python/adjoint/wrapper.py -./python/adjoint/__init__.py -./python/adjoint/filters.py -./python/adjoint/objective.py -./python/adjoint/filter_source.py +./python/meep.i +./python/verbosity_mgr.py +./python/mpb.i ./python/tests -./python/tests/test_get_epsilon_grid.py -./python/tests/test_pw_source.trs -./python/tests/test_ldos.py -./python/tests/test_visualization.trs -./python/tests/test_antenna_radiation.trs -./python/tests/test_integrated_source.py -./python/tests/test_cyl_ellipsoid.trs -./python/tests/test_eigfreq.trs -./python/tests/test_source.log -./python/tests/test_user_defined_material.log +./python/tests/test_cyl_ellipsoid.py +./python/tests/test_ring_cyl.trs +./python/tests/test_integrated_source.trs +./python/tests/test_materials_library.py +./python/tests/test_holey_wvg_bands.trs +./python/tests/test_get_point.py +./python/tests/test_dump_load.log +./python/tests/test_adjoint_solver.trs +./python/tests/test_cavity_farfield.trs +./python/tests/test_material_grid.trs +./python/tests/test_adjoint_cyl.trs +./python/tests/test_fragment_stats.py +./python/tests/test_diffracted_planewave.py +./python/tests/test_chunks.trs +./python/tests/test_cyl_ellipsoid.log +./python/tests/test_prism.log +./python/tests/test_force.trs +./python/tests/test_simulation.py +./python/tests/test_adjoint_jax.log +./python/tests/test_n2f_periodic.log +./python/tests/test_pw_source.py +./python/tests/test_dft_energy.py +./python/tests/test_oblique_source.log +./python/tests/test_timing_measurements.log +./python/tests/test_mode_coeffs.py +./python/tests/test_wvg_src.py +./python/tests/test_3rd_harm_1d.trs +./python/tests/test_refl_angular.trs +./python/tests/test_physical.py ./python/tests/test_special_kz.py -./python/tests/test_get_point.trs +./python/tests/test_source.trs +./python/tests/test_conductivity.py +./python/tests/test_materials_library.trs +./python/tests/test_bend_flux.log +./python/tests/test_geom.trs +./python/tests/test_multilevel_atom.log +./python/tests/test_field_functions.trs ./python/tests/test_adjoint_solver.py +./python/tests/test_source.log +./python/tests/test_faraday_rotation.log +./python/tests/test_adjoint_jax.py +./python/tests/test_verbosity_mgr.py +./python/tests/test_dump_load.trs +./python/tests/test_holey_wvg_bands.log +./python/tests/test_user_defined_material.log +./python/tests/test_oblique_source.py ./python/tests/test_fragment_stats.log -./python/tests/test_material_dispersion.py -./python/tests/test_chunks.trs -./python/tests/test_binary_partition_utils.py -./python/tests/test_cavity_farfield.log -./python/tests/test_physical.trs +./python/tests/test_force.py ./python/tests/test_get_point.log -./python/tests/test_kdom.py -./python/tests/test_chunk_balancer.trs -./python/tests/test_oblique_source.log -./python/tests/test_adjoint_jax.py -./python/tests/test_multilevel_atom.trs -./python/tests/test_simulation.log +./python/tests/test_ldos.log +./python/tests/test_cavity_farfield.log +./python/tests/test_field_functions.log ./python/tests/test_special_kz.log -./python/tests/test_get_point.py -./python/tests/test_wvg_src.py -./python/tests/test_medium_evaluations.py -./python/tests/test_oblique_source.trs -./python/tests/test_verbosity_mgr.py -./python/tests/test_holey_wvg_bands.py -./python/tests/test_medium_evaluations.log -./python/tests/test_pw_source.py -./python/tests/test_get_epsilon_grid.log -./python/tests/test_absorber_1d.trs -./python/tests/test_eigfreq.log +./python/tests/test_cyl_ellipsoid.trs +./python/tests/test_ring.trs +./python/tests/test_prism.py +./python/tests/test_material_grid.log +./python/tests/test_simulation.log +./python/tests/test_divide_mpi_processes.log ./python/tests/__pycache__ ./python/tests/__pycache__/utils.cpython-311.pyc -./python/tests/utils.py -./python/tests/test_multilevel_atom.py -./python/tests/test_medium_evaluations.trs -./python/tests/test_force.log -./python/tests/test_ring.log ./python/tests/test_dft_energy.trs -./python/tests/test_fragment_stats.trs -./python/tests/test_simulation.trs -./python/tests/test_user_defined_material.trs -./python/tests/test_eigfreq.py -./python/tests/test_fragment_stats.py -./python/tests/test_refl_angular.py -./python/tests/test_conductivity.trs -./python/tests/test_adjoint_cyl.log -./python/tests/test_cavity_arrayslice.py -./python/tests/test_materials_library.trs -./python/tests/test_bend_flux.py -./python/tests/test_dump_load.log +./python/tests/test_antenna_radiation.log +./python/tests/test_visualization.log +./python/tests/test_eigfreq.trs +./python/tests/test_dft_fields.py +./python/tests/test_gaussianbeam.log +./python/tests/test_3rd_harm_1d.log ./python/tests/test_prism.trs -./python/tests/test_prism.py +./python/tests/test_adjoint_cyl.py +./python/tests/test_antenna_radiation.py +./python/tests/test_visualization.py +./python/tests/test_holey_wvg_cavity.log +./python/tests/test_cavity_arrayslice.trs ./python/tests/test_adjoint_utils.log -./python/tests/test_divide_mpi_processes.trs -./python/tests/test_gaussianbeam.py -./python/tests/test_ring_cyl.log -./python/tests/test_divide_mpi_processes.log -./python/tests/test_cyl_ellipsoid.log -./python/tests/test_antenna_radiation.log +./python/tests/test_chunk_layout.py +./python/tests/test_binary_partition_utils.log +./python/tests/test_kdom.py +./python/tests/test_fragment_stats.trs +./python/tests/test_medium_evaluations.log +./python/tests/test_binary_partition_utils.py +./python/tests/utils.py ./python/tests/test_dft_energy.log +./python/tests/test_adjoint_solver.log +./python/tests/test_gaussianbeam.trs +./python/tests/test_physical.log +./python/tests/test_ldos.py +./python/tests/test_user_defined_material.py +./python/tests/test_bend_flux.py +./python/tests/test_timing_measurements.trs ./python/tests/test_refl_angular.log -./python/tests/test_holey_wvg_cavity.log -./python/tests/test_ldos.log -./python/tests/test_cavity_arrayslice.log -./python/tests/test_special_kz.trs -./python/tests/test_dump_load.trs +./python/tests/test_chunk_layout.trs +./python/tests/test_ring.py +./python/tests/test_array_metadata.log +./python/tests/test_geom.log +./python/tests/test_ring.log +./python/tests/test_eigfreq.py +./python/tests/test_get_epsilon_grid.log +./python/tests/test_get_epsilon_grid.py +./python/tests/test_dispersive_eigenmode.py +./python/tests/test_adjoint_utils.trs +./python/tests/test_refl_angular.py +./python/tests/test_absorber_1d.py +./python/tests/test_timing_measurements.py +./python/tests/test_mode_decomposition.py +./python/tests/test_faraday_rotation.trs +./python/tests/test_get_point.trs +./python/tests/test_adjoint_utils.py +./python/tests/test_chunk_balancer.py +./python/tests/test_dft_fields.trs +./python/tests/test_integrated_source.log +./python/tests/test_user_defined_material.trs +./python/tests/test_holey_wvg_cavity.py ./python/tests/test_ring_cyl.py +./python/tests/test_visualization.trs +./python/tests/test_simulation.trs +./python/tests/test_physical.trs +./python/tests/test_source.py +./python/tests/test_n2f_periodic.py +./python/tests/test_chunk_layout.log +./python/tests/test_binary_partition_utils.trs +./python/tests/test_cavity_arrayslice.py +./python/tests/test_holey_wvg_cavity.trs +./python/tests/test_n2f_periodic.trs +./python/tests/test_dump_load.py +./python/tests/test_special_kz.trs +./python/tests/test_array_metadata.py +./python/tests/test_chunk_balancer.trs +./python/tests/test_chunks.py +./python/tests/test_field_functions.py +./python/tests/test_dft_fields.log +./python/tests/test_get_epsilon_grid.trs +./python/tests/test_conductivity.trs +./python/tests/test_medium_evaluations.trs +./python/tests/test_cavity_farfield.py +./python/tests/test_conductivity.log +./python/tests/test_cavity_arrayslice.log +./python/tests/test_pw_source.log +./python/tests/test_gaussianbeam.py +./python/tests/test_array_metadata.trs +./python/tests/test_multilevel_atom.trs +./python/tests/test_absorber_1d.log +./python/tests/test_geom.py +./python/tests/test_force.log +./python/tests/test_multilevel_atom.py +./python/tests/test_chunks.log +./python/tests/test_adjoint_jax.trs +./python/tests/test_divide_mpi_processes.trs +./python/tests/test_integrated_source.py +./python/tests/test_absorber_1d.trs ./python/tests/test_divide_mpi_processes.py -./python/tests/test_user_defined_material.py -./python/tests/test_field_functions.log -./python/tests/test_ldos.trs +./python/tests/test_chunk_balancer.log +./python/tests/test_adjoint_cyl.log +./python/tests/test_materials_library.log +./python/tests/test_pw_source.trs +./python/tests/test_material_dispersion.py +./python/tests/test_material_grid.py ./python/tests/data +./python/tests/data/tutorial-te-eigenvectors-8-1.h5 +./python/tests/data/line-defect-e.k04.b12.z.tm.h5 +./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 +./python/tests/data/tutorial-mu.h5 +./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 ./python/tests/data/cavity_arrayslice_2d.npy ./python/tests/data/tutorial-e.k16.b08.z.tm.h5 -./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 -./python/tests/data/cavity_arrayslice_1d.npy -./python/tests/data/converted-diamond-dpwr.k06.b05.h5 -./python/tests/data/subpixel_avg-epsilon.h5 -./python/tests/data/tutorial-C.k16.b08.te.h5 -./python/tests/data/cavity-farfield.h5 -./python/tests/data/tutorial-mu.h5 -./python/tests/data/tutorial-d.k16.b08.te.h5 -./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 -./python/tests/data/tutorial-te-eigenvectors-8-1.h5 -./python/tests/data/bend-flux.gds ./python/tests/data/eps_input_file_test.h5 -./python/tests/data/convex_prism_vertices.npz ./python/tests/data/tutorial-te-eigenvectors-3-3.h5 -./python/tests/data/tutorial-epsilon.h5 +./python/tests/data/tutorial-d.k01.b02.te.h5 ./python/tests/data/spiral.gds -./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 -./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 +./python/tests/data/bend-flux.gds +./python/tests/data/tutorial-e.k16.b08.te.h5 ./python/tests/data/tutorial-flux.v.k11.b08.te.h5 -./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 -./python/tests/data/tutorial-b.k16.b08.te.h5 +./python/tests/data/tutorial-te-eigenvectors.h5 +./python/tests/data/convex_prism_vertices.npz +./python/tests/data/tutorial-d.k16.b08.te.h5 +./python/tests/data/strip-flux.v.k01.b04.x.h5 ./python/tests/data/amp_func_file.h5 -./python/tests/data/diamond-dpwr.k06.b05.h5 ./python/tests/data/bragg-h.k01.b08.y.tm.h5 -./python/tests/data/tutorial-d.k01.b02.te.h5 -./python/tests/data/tutorial-te-eigenvectors.h5 -./python/tests/data/nonconvex_prism_vertices3.npz +./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 +./python/tests/data/cavity_arrayslice_1d.npy +./python/tests/data/tutorial-epsilon.h5 +./python/tests/data/subpixel_avg-epsilon.h5 +./python/tests/data/converted-diamond-dpwr.k06.b05.h5 +./python/tests/data/diamond-dpwr.k06.b05.h5 +./python/tests/data/tutorial-C.k16.b08.te.h5 ./python/tests/data/nonconvex_prism_vertices2.npz ./python/tests/data/nonconvex_prism_vertices1.npz -./python/tests/data/tutorial-h.k16.b08.te.h5 -./python/tests/data/strip-flux.v.k01.b04.x.h5 +./python/tests/data/cavity-farfield.h5 +./python/tests/data/nonconvex_prism_vertices3.npz +./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 +./python/tests/data/tutorial-b.k16.b08.te.h5 +./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 ./python/tests/data/cavity-farfield-4-freqs.h5 -./python/tests/data/tutorial-e.k16.b08.te.h5 -./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 +./python/tests/data/tutorial-h.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b02.te.h5 -./python/tests/data/line-defect-e.k04.b12.z.tm.h5 -./python/tests/test_chunk_layout.log -./python/tests/test_gaussianbeam.log -./python/tests/test_ring.py -./python/tests/test_cavity_farfield.trs -./python/tests/test_visualization.log -./python/tests/test_geom.trs -./python/tests/test_mpb.py +./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 +./python/tests/test_holey_wvg_bands.py +./python/tests/test_ldos.trs ./python/tests/test_faraday_rotation.py -./python/tests/test_n2f_periodic.log -./python/tests/test_array_metadata.log -./python/tests/test_simulation.py +./python/tests/test_antenna_radiation.trs +./python/tests/test_ring_cyl.log +./python/tests/test_binary_grating.py +./python/tests/test_mpb.py +./python/tests/test_eigfreq.log ./python/tests/test_3rd_harm_1d.py -./python/tests/test_force.trs -./python/tests/test_antenna_radiation.py -./python/tests/test_adjoint_utils.py -./python/tests/test_chunk_balancer.log -./python/tests/test_diffracted_planewave.py -./python/tests/test_dft_fields.trs -./python/tests/test_holey_wvg_cavity.py -./python/tests/test_force.py -./python/tests/test_multilevel_atom.log -./python/tests/test_chunk_layout.trs -./python/tests/test_field_functions.trs -./python/tests/test_get_epsilon_grid.trs -./python/tests/test_dft_fields.log -./python/tests/test_absorber_1d.py -./python/tests/test_bend_flux.log -./python/tests/test_ring.trs -./python/tests/test_holey_wvg_cavity.trs -./python/tests/test_geom.log -./python/tests/test_integrated_source.log -./python/tests/test_physical.log -./python/tests/test_n2f_periodic.trs -./python/tests/test_timing_measurements.trs -./python/tests/test_oblique_source.py -./python/tests/test_material_grid.py -./python/tests/test_chunk_balancer.py -./python/tests/test_timing_measurements.log -./python/tests/test_faraday_rotation.trs -./python/tests/test_geom.py -./python/tests/test_integrated_source.trs -./python/tests/test_materials_library.log -./python/tests/test_n2f_periodic.py -./python/tests/test_physical.py -./python/tests/test_dft_fields.py -./python/tests/test_timing_measurements.py -./python/tests/test_chunk_layout.py -./python/tests/test_ring_cyl.trs -./python/tests/test_visualization.py -./python/tests/test_materials_library.py -./python/tests/test_conductivity.py -./python/tests/test_conductivity.log -./python/tests/test_material_grid.trs -./python/tests/test_chunks.log +./python/tests/test_medium_evaluations.py ./python/tests/test_bend_flux.trs -./python/tests/test_gaussianbeam.trs -./python/tests/test_3rd_harm_1d.log -./python/tests/test_binary_partition_utils.trs -./python/tests/test_source.trs -./python/tests/test_prism.log -./python/tests/test_cyl_ellipsoid.py -./python/tests/test_absorber_1d.log -./python/tests/test_adjoint_cyl.py -./python/tests/test_refl_angular.trs -./python/tests/test_source.py -./python/tests/test_dft_energy.py -./python/tests/test_holey_wvg_bands.log -./python/tests/test_dispersive_eigenmode.py -./python/tests/test_mode_decomposition.py -./python/tests/test_adjoint_cyl.trs -./python/tests/test_binary_partition_utils.log -./python/tests/test_mode_coeffs.py -./python/tests/test_adjoint_jax.trs -./python/tests/test_adjoint_jax.log -./python/tests/test_chunks.py -./python/tests/test_faraday_rotation.log -./python/tests/test_adjoint_utils.trs -./python/tests/test_array_metadata.trs -./python/tests/test_dump_load.py -./python/tests/test_3rd_harm_1d.trs -./python/tests/test_adjoint_solver.trs -./python/tests/test_adjoint_solver.log -./python/tests/test_material_grid.log -./python/tests/test_cavity_arrayslice.trs -./python/tests/test_binary_grating.py -./python/tests/test_array_metadata.py -./python/tests/test_pw_source.log -./python/tests/test_cavity_farfield.py -./python/tests/test_field_functions.py -./python/tests/test_holey_wvg_bands.trs -./python/_meep_la-meep-python.o -./python/chunk_balancer.py -./python/_meep.la -./python/binary_partition_utils.py -./python/typemap_utils.cpp -./python/_meep_la-meep-python.lo -./python/Makefile.in -./python/requirements.txt -./python/Makefile -./python/visualization.py -./python/meep.py +./python/tests/test_oblique_source.trs +./python/timing_measurements.py ./python/Makefile.am -./python/verbosity_mgr.py -./python/geom.py -./python/materials.py +./python/numpy.i +./python/vec.i ./python/meep -./python/meep/source.py +./python/meep/verbosity_mgr.py +./python/meep/timing_measurements.py ./python/meep/adjoint -./python/meep/adjoint/optimization_problem.py ./python/meep/adjoint/basis.py -./python/meep/adjoint/connectivity.py +./python/meep/adjoint/filter_source.py ./python/meep/adjoint/utils.py -./python/meep/adjoint/wrapper.py ./python/meep/adjoint/__init__.py ./python/meep/adjoint/filters.py +./python/meep/adjoint/optimization_problem.py +./python/meep/adjoint/wrapper.py +./python/meep/adjoint/connectivity.py ./python/meep/adjoint/objective.py -./python/meep/adjoint/filter_source.py ./python/meep/__pycache__ -./python/meep/__pycache__/source.cpython-311.pyc ./python/meep/__pycache__/verbosity_mgr.cpython-311.pyc +./python/meep/__pycache__/source.cpython-311.pyc ./python/meep/__pycache__/__init__.cpython-311.pyc -./python/meep/__pycache__/geom.cpython-311.pyc ./python/meep/__pycache__/simulation.cpython-311.pyc -./python/meep/chunk_balancer.py +./python/meep/__pycache__/geom.cpython-311.pyc ./python/meep/_meep.so -./python/meep/binary_partition_utils.py -./python/meep/visualization.py -./python/meep/verbosity_mgr.py -./python/meep/geom.py ./python/meep/materials.py -./python/meep/timing_measurements.py +./python/meep/chunk_balancer.py ./python/meep/__init__.py +./python/meep/geom.py +./python/meep/binary_partition_utils.py +./python/meep/source.py +./python/meep/visualization.py ./python/meep/simulation.py -./python/timing_measurements.py -./python/solver.py -./python/__init__.py +./python/_meep_la-meep-python.lo +./python/adjoint +./python/adjoint/basis.py +./python/adjoint/filter_source.py +./python/adjoint/utils.py +./python/adjoint/__init__.py +./python/adjoint/filters.py +./python/adjoint/optimization_problem.py +./python/adjoint/wrapper.py +./python/adjoint/connectivity.py +./python/adjoint/objective.py +./python/_meep.la ./python/.libs +./python/.libs/_meep.so.30.0.0 +./python/.libs/_meep.lai +./python/.libs/_meep.la ./python/.libs/_meep.a -./python/.libs/_meep.so.30.0.0T -./python/.libs/_meep_la-meep-python.o ./python/.libs/_meep.so -./python/.libs/_meep.la -./python/.libs/_meep.lai -./python/.libs/_meep.so.30.0.0 +./python/.libs/_meep.so.30.0.0T ./python/.libs/_meep.so.30 +./python/.libs/_meep_la-meep-python.o +./python/requirements.txt +./python/materials.py +./python/chunk_balancer.py +./python/examples +./python/examples/oblique-source.py +./python/examples/cavity_arrayslice.py +./python/examples/refl-quartz.py +./python/examples/coupler.gds +./python/examples/planar_cavity_ldos.py +./python/examples/parallel-wvgs-mpb.py +./python/examples/material-dispersion.py +./python/examples/bend-flux.ipynb +./python/examples/mpb_tri_holes.py +./python/examples/straight-waveguide.py +./python/examples/stochastic_emitter.ipynb +./python/examples/holey-wvg-bands.ipynb +./python/examples/bend-flux.py +./python/examples/README.md +./python/examples/coupler.py +./python/examples/metal-cavity-ldos.py +./python/examples/adjoint_optimization +./python/examples/adjoint_optimization/03-Filtered_Waveguide_Bend.ipynb +./python/examples/adjoint_optimization/02-Waveguide_Bend.ipynb +./python/examples/adjoint_optimization/Bend Minimax.ipynb +./python/examples/adjoint_optimization/Fourier-Metalens.ipynb +./python/examples/adjoint_optimization/06-Near2Far-Epigraph.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints +./python/examples/adjoint_optimization/.ipynb_checkpoints/03-Filtered_Waveguide_Bend-checkpoint.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints/Bend Minimax-checkpoint.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints/01-Introduction-checkpoint.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints/05-Near2Far-checkpoint.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints/04-Splitter-checkpoint.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints/02-Waveguide_Bend-checkpoint.ipynb +./python/examples/adjoint_optimization/.ipynb_checkpoints/06-Near2Far-Epigraph-checkpoint.ipynb +./python/examples/adjoint_optimization/Fourier-Bend.ipynb +./python/examples/adjoint_optimization/01-Introduction.ipynb +./python/examples/adjoint_optimization/05-Near2Far.ipynb +./python/examples/adjoint_optimization/04-Splitter.ipynb +./python/examples/mpb_strip.py +./python/examples/perturbation_theory_2d.py +./python/examples/binary_grating_phasemap.py +./python/examples/mpb_hole_slab.py +./python/examples/binary_grating_phasemap.ipynb +./python/examples/3rd-harm-1d.ipynb +./python/examples/oblique-planewave.py +./python/examples/mpb_line_defect.py +./python/examples/refl-angular-kz2d.py +./python/examples/metasurface_lens.py +./python/examples/binary_grating_n2f.py +./python/examples/faraday-rotation.py +./python/examples/mode-decomposition.py +./python/examples/bent-waveguide.py +./python/examples/absorbed_power_density.py +./python/examples/coupler.ipynb +./python/examples/mode-decomposition.ipynb +./python/examples/stochastic_emitter_reciprocity.py +./python/examples/finite_grating.ipynb +./python/examples/antenna_pec_ground_plane.py +./python/examples/mpb_sq_rods.py +./python/examples/cavity-farfield.ipynb +./python/examples/solve-cw.ipynb +./python/examples/absorber-1d.py +./python/examples/stochastic_emitter_line.py +./python/examples/parallel-wvgs-force.py +./python/examples/metasurface_lens.ipynb +./python/examples/3rd-harm-1d.py +./python/examples/gaussian-beam.py +./python/examples/binary_grating_n2f.ipynb +./python/examples/ring.py +./python/examples/stochastic_emitter.py +./python/examples/differential_cross_section.py +./python/examples/bent-waveguide.ipynb +./python/examples/mpb_data_analysis.py +./python/examples/straight-waveguide.ipynb +./python/examples/perturbation_theory.py +./python/examples/absorbed_power_density.ipynb +./python/examples/extraction_eff_ldos.py +./python/examples/multilevel-atom.py +./python/examples/antenna-radiation.py +./python/examples/ring-mode-overlap.py +./python/examples/mpb_tutorial.py +./python/examples/cylinder_cross_section.ipynb +./python/examples/grating2d_triangular_lattice.py +./python/examples/mpb_bragg_sine.py +./python/examples/binary_grating_oblique.py +./python/examples/binary_grating_oblique.ipynb +./python/examples/holey-wvg-bands.py +./python/examples/polarization_grating.ipynb +./python/examples/refl-angular.ipynb +./python/examples/polarization_grating.py +./python/examples/oblique-planewave.ipynb +./python/examples/cherenkov-radiation.py +./python/examples/ring.ipynb +./python/examples/mie_scattering.ipynb +./python/examples/solve-cw.py +./python/examples/mpb_tri_rods.py +./python/examples/mie_scattering.py +./python/examples/cavity-farfield.py +./python/examples/antenna-radiation.ipynb +./python/examples/phase_in_material.py +./python/examples/zone_plate.ipynb +./python/examples/finite_grating.py +./python/examples/parallel-wvgs-force.ipynb +./python/examples/media +./python/examples/media/visualization_demo.gif +./python/examples/media/hole-wvg-cavity-res.mp4 +./python/examples/media/straight_waveguide.mp4 +./python/examples/media/oblique-source-eig.mp4 +./python/examples/media/bent_waveguide.mp4 +./python/examples/media/ring_mid.mp4 +./python/examples/media/holey-wvg-bands-0.4-0.1896.mp4 +./python/examples/media/visualization_out_plane.mp4 +./python/examples/media/ring_simple.mp4 +./python/examples/media/ring_large.mp4 +./python/examples/media/holey-wvg-bands-0.25-0.2506.mp4 +./python/examples/media/visualization_demo.mp4 +./python/examples/media/holey-wvg-bands-0.1-0.4811.mp4 +./python/examples/media/holey-wvg-bands-0.4-0.3175.mp4 +./python/examples/media/oblique-source-normal.mp4 +./python/examples/media/hole-wvg-cavity.mp4 +./python/examples/media/visualization_normalize.mp4 +./python/examples/media/holey-wvg-bands-0.3-0.8838.mp4 +./python/examples/mpb_bragg.py +./python/examples/refl-angular.py +./python/examples/binary_grating.py +./python/examples/holey-wvg-cavity.ipynb +./python/examples/differential_cross_section.ipynb +./python/examples/oblique-source.ipynb +./python/examples/wvg-src.py +./python/examples/diffracted_planewave.py +./python/examples/holey-wvg-cavity.py +./python/examples/mpb_diamond.py +./python/examples/cylinder_cross_section.py +./python/examples/perturbation_theory.ipynb +./python/examples/binary_grating.ipynb +./python/examples/mpb_honey_rods.py +./python/examples/eps_fit_lorentzian.py +./python/examples/cyl-ellipsoid.py +./python/examples/pw-source.py +./python/examples/ring_gds.py +./python/examples/metal-cavity-ldos.ipynb +./python/examples/refl-quartz.ipynb +./python/examples/zone_plate.py +./python/examples/ring-cyl.py +./python/examples/chirped_pulse.py +./python/__init__.py ./python/test-suite.log -./python/vec.i -./python/mpb.i -./python/numpy.i -./python/meep.i +./python/geom.py +./python/_meep_la-meep-python.o +./python/mpb_data.py +./python/binary_partition_utils.py +./python/solver.py +./python/Makefile +./python/source.py +./python/visualization.py +./python/meep-python.hpp ./python/simulation.py -./tests -./tests/aniso_disp.trs -./tests/gdsII-3d.o -./tests/array-slice-ll -./tests/bragg_transmission.cpp -./tests/harmonics.log -./tests/harmonics.cpp -./tests/stress_tensor.o -./tests/flux.log -./tests/dft-fields.cpp -./tests/cyl-ellipsoid-ll.cpp -./tests/2D_convergence.cpp -./tests/aniso_disp.cpp -./tests/bragg_transmission -./tests/convergence_cyl_waveguide.o -./tests/array-slice-ll.cpp -./tests/pml.trs -./tests/known_results -./tests/integrate.o -./tests/dft-fields -./tests/h5test.log -./tests/one_dimensional.o -./tests/dump_load.log -./tests/pml.cpp -./tests/one_dimensional -./tests/array-metadata -./tests/bragg_transmission.trs -./tests/bench.trs -./tests/bench.cpp -./tests/flux -./tests/physical.log -./tests/integrate.cpp -./tests/cyl-ellipsoid.ctl -./tests/known_results.cpp -./tests/dump_load.o -./tests/aniso_disp.o -./tests/two_dimensional.log -./tests/absorber-1d-ll -./tests/two_dimensional.o -./tests/bragg_transmission.o -./tests/near2far -./tests/pml -./tests/cyl-ellipsoid-eps-ref.h5 -./tests/two_dimensional.trs -./tests/ring-ll.o -./tests/flux.trs -./tests/known_results.trs -./tests/array-slice-ll.o -./tests/dump_load -./tests/stress_tensor -./tests/2D_convergence -./tests/pml.log -./tests/Makefile.in -./tests/pw-source-ll.o -./tests/bench.o -./tests/cyl-ellipsoid-ll.o -./tests/near2far.log -./tests/integrate.log -./tests/bench.log -./tests/array-metadata.cpp -./tests/ring-ll.cpp -./tests/bend-flux-ll.cpp -./tests/stress_tensor.trs -./tests/symmetry.o -./tests/aniso_disp -./tests/three_d -./tests/gdsII-3d -./tests/h5test.trs -./tests/gdsII-3d.cpp -./tests/Makefile -./tests/cylindrical.log -./tests/stress_tensor.cpp -./tests/cylindrical.o -./tests/absorber-1d-ll.cpp -./tests/physical.cpp -./tests/cylindrical.cpp -./tests/symmetry.cpp -./tests/one_dimensional.cpp -./tests/harmonics.o -./tests/Makefile.am -./tests/gdsII-3d.gds -./tests/array-slice-ll-ref.h5 -./tests/physical.o -./tests/three_d.o -./tests/three_d.log -./tests/known_results.log -./tests/ring-ll -./tests/convergence_cyl_waveguide -./tests/two_dimensional.cpp -./tests/pw-source-ll -./tests/cyl-ellipsoid-ll -./tests/2D_convergence.log -./tests/near2far.trs -./tests/three_d.trs -./tests/harmonics -./tests/known_results.o -./tests/integrate.trs -./tests/stress_tensor.log -./tests/user-defined-material -./tests/dft-fields.o -./tests/h5test -./tests/h5test.o -./tests/symmetry.trs -./tests/one_dimensional.trs -./tests/user-defined-material.o -./tests/bend-flux-ll.o -./tests/.libs -./tests/.libs/array-slice-ll -./tests/.libs/bragg_transmission -./tests/.libs/known_results -./tests/.libs/dft-fields -./tests/.libs/one_dimensional -./tests/.libs/array-metadata -./tests/.libs/flux -./tests/.libs/absorber-1d-ll -./tests/.libs/near2far -./tests/.libs/pml -./tests/.libs/dump_load -./tests/.libs/stress_tensor -./tests/.libs/2D_convergence -./tests/.libs/aniso_disp -./tests/.libs/three_d -./tests/.libs/gdsII-3d -./tests/.libs/ring-ll -./tests/.libs/convergence_cyl_waveguide -./tests/.libs/pw-source-ll -./tests/.libs/cyl-ellipsoid-ll -./tests/.libs/harmonics -./tests/.libs/user-defined-material -./tests/.libs/h5test -./tests/.libs/bench -./tests/.libs/physical -./tests/.libs/symmetry -./tests/.libs/two_dimensional -./tests/.libs/cylindrical -./tests/.libs/bend-flux-ll -./tests/.libs/integrate -./tests/test-suite.log -./tests/bench -./tests/physical -./tests/aniso_disp.log -./tests/h5test.cpp -./tests/symmetry -./tests/two_dimensional -./tests/flux.o -./tests/convergence_cyl_waveguide.cpp -./tests/near2far.cpp -./tests/flux.cpp -./tests/pw-source-ll.cpp -./tests/pml.o -./tests/three_d.cpp -./tests/symmetry.log -./tests/array-metadata.o -./tests/convergence_cyl_waveguide.log -./tests/cylindrical.trs -./tests/cylindrical -./tests/near2far.o -./tests/one_dimensional.log -./tests/dump_load.trs -./tests/user-defined-material.cpp -./tests/physical.trs -./tests/2D_convergence.o -./tests/convergence_cyl_waveguide.trs -./tests/dump_load.cpp -./tests/bend-flux-ll -./tests/bragg_transmission.log -./tests/integrate -./tests/harmonics.trs -./tests/2D_convergence.trs -./tests/absorber-1d-ll.o -./configure.ac -./COPYRIGHT -./contrib -./contrib/build-meep.sh -./meep-pkgconfig.in -./autom4te.cache -./autom4te.cache/output.3 -./autom4te.cache/traces.3 -./autom4te.cache/traces.2 -./autom4te.cache/output.2 -./autom4te.cache/traces.1 -./autom4te.cache/output.0 -./autom4te.cache/traces.0 -./autom4te.cache/output.1 -./autom4te.cache/requests -./.mailmap -./monkeytype.sqlite3 -./mkdocs.yml -./add_type_hints.xonsh +./python/typemap_utils.cpp +./python/meep.py +./python/Makefile.in +./python/meep-python.cxx +./NEWS.md +./install-sh +./meep-pkgconfig ./.pc -./.pc/applied-patches ./.pc/.quilt_patches +./.pc/applied-patches +./.pc/.quilt_series ./.pc/.version ./.pc/i386-fix.patch ./.pc/i386-fix.patch/src ./.pc/i386-fix.patch/src/mympi.cpp -./.pc/.quilt_series -./Makefile.in -./.travis.yml -./LICENSE -./missing -./codemeta.json -./config.h.in -./doc -./doc/requirements.txt -./doc/_api_snippets -./doc/_api_snippets/method_template.md -./doc/_api_snippets/function_template.md -./doc/_api_snippets/class_template.md -./doc/README.md -./doc/meep-logos.svg -./doc/generate_py_api.py -./doc/docs -./doc/docs/images -./doc/docs/images/multi_mode_eigsource_pulse_A.png -./doc/docs/images/Holey-cavity-trans.png -./doc/docs/images/3rd-harm-1d-flux.png -./doc/docs/images/metasurface_lens_phasemap.png -./doc/docs/images/reflectance_angular_spectrum.png -./doc/docs/images/Ring-cyl-ez-0.118.png -./doc/docs/images/directional_coupler_field_profiles.png -./doc/docs/images/Tutorial-wvg-straight-ez-000200.00.png -./doc/docs/images/pwsource_Ey_PML.png -./doc/docs/images/zone_plate_schematic.png -./doc/docs/images/cylinder_cross_section.png -./doc/docs/images/Holey-wvg-bands.png -./doc/docs/images/farfields_vs_DFTfields_holeycavity_mismatch.png -./doc/docs/images/gaussian_beam.png -./doc/docs/images/parallel_benchmark_DFT.png -./doc/docs/images/stochastic_emitter_normalized_flux_comparison.png -./doc/docs/images/BentFluxGeometryVisualization.png -./doc/docs/images/parallel_benchmark_barplot.png -./doc/docs/images/Ring-cyl-ez-0.148.png -./doc/docs/images/Meep-banner.png -./doc/docs/images/Faraday-rotation-comparison.png -./doc/docs/images/Holey-wvg-cavity-hz-slice.png -./doc/docs/images/finite_grating_nperiods5.png -./doc/docs/images/polarization_grating_diffraction_orders.png -./doc/docs/images/planar_cavity_purcell_enhancement.png -./doc/docs/images/Tutorial-wvg-bent-eps-000000.00.png -./doc/docs/images/ChunkingAndSymmetry.svg -./doc/docs/images/Holey-wvg-kx=0.4-w=0.3175.gif -./doc/docs/images/Dblocks-force.jpg -./doc/docs/images/coupler3D.png -./doc/docs/images/Extruded-blocks.jpg -./doc/docs/images/3rd-harm-1d-vs-chi.png -./doc/docs/images/Holey-wvg-kx=0.30-w=0.8838.gif -./doc/docs/images/PML_failure.png -./doc/docs/images/pwsource_Ez_PML.png -./doc/docs/images/ChunkStatistics.png -./doc/docs/images/Tut-ring-ez-0.118.gif -./doc/docs/images/grating_phasemap.png -./doc/docs/images/Holey-wvg-kx=0.25-w=0.2506.gif -./doc/docs/images/material_grid.png -./doc/docs/images/Field-visualization.jpg -./doc/docs/images/dipole_extraction_eff_cyl.png -./doc/docs/images/Tutorial-wvg-ez.gif -./doc/docs/images/Tut-ring-ez-0.175.gif -./doc/docs/images/Yee-te.png -./doc/docs/images/Holey-wvg-kx=0.4-w=0.1896.gif -./doc/docs/images/extraction_eff_vs_dipole_height.png -./doc/docs/images/grating.png -./doc/docs/images/stochastic_emitter_forward_vs_backward_flux_spectrum.png -./doc/docs/images/oblique_source_singlemode.png -./doc/docs/images/waveguide_rotation_glancing_small.png -./doc/docs/images/meep_salt_comparison_thresh.png -./doc/docs/images/finite_grating_nperiods20.png -./doc/docs/images/cherenkov_radiation.png -./doc/docs/images/SiO2_materials_library.png -./doc/docs/images/single_mode_eigsource_pulse.png -./doc/docs/images/CWsolver-scheme.png -./doc/docs/images/waveguide-taper.png -./doc/docs/images/Holey-wvg-cavity-Q.png -./doc/docs/images/grating_diffraction_spectra_n2f.png -./doc/docs/images/BentFluxFieldsVisualization.png -./doc/docs/images/eigenmode_source.png -./doc/docs/images/sphere_epsilon.png -./doc/docs/images/Tutorial-wvg-bent-ez-tslice.png -./doc/docs/images/Waveguide_forces.png -./doc/docs/images/ring_resonator_gds_Hz.png -./doc/docs/images/stochastic_emitter_line_normalized_flux_comparison.png -./doc/docs/images/parallel_benchmark_commcomp_vs_nprocs.png -./doc/docs/images/directional_coupler_flux.png -./doc/docs/images/antenna_pec_ground_plane.png -./doc/docs/images/oblique_source_multimode.png -./doc/docs/images/Yee-cube.png -./doc/docs/images/Chunks_YSymmetry.png -./doc/docs/images/Material-dispersion-epsim.png -./doc/docs/images/finite_grating_schematic.png -./doc/docs/images/Point-dct.jpg -./doc/docs/images/zone_plate_farfield.png -./doc/docs/images/mie_scattering.png -./doc/docs/images/pypackage_creation.png -./doc/docs/images/Tutorial-wvg-bent2-ez-000300.00.png -./doc/docs/images/Material-dispersion-eps.png -./doc/docs/images/stochastic_emitter_trials.png -./doc/docs/images/Vac.jpg -./doc/docs/images/Holey-wvg-cavity-hz-001401.23.png -./doc/docs/images/multi_mode_eigsource_pulse_B.png -./doc/docs/images/Tut-bend-flux.png -./doc/docs/images/coupler_refl_S11_S12.png -./doc/docs/images/output_epsilon_kpoint.png -./doc/docs/images/grating_0th_order_tran.png -./doc/docs/images/parallel_wvgs_s0.1.png -./doc/docs/images/mie_scattering_schematic.png -./doc/docs/images/phase-in-material.png -./doc/docs/images/chirped_pulse.png -./doc/docs/images/Material-dispersion-epsre.png -./doc/docs/images/fused_quartz_reflectance_spectrum.png -./doc/docs/images/line_source_DCT_ampfunc_convergence.png -./doc/docs/images/Surface-force.jpg -./doc/docs/images/klayout_schematic.png -./doc/docs/images/residue_fields_bound_charges.png -./doc/docs/images/chunk_balancer_variance.jpg -./doc/docs/images/Python-Tutorial-wvg-bent-ez-tslice.png -./doc/docs/images/PermittivityWithLabeledAxes.png -./doc/docs/images/CWsolver-python.png -./doc/docs/images/triangular_lattice.png -./doc/docs/images/metasurface_lens_epsilon.png -./doc/docs/images/swig_process.png -./doc/docs/images/power_density_map.png -./doc/docs/images/Holey-wvg-cavity-eps-000000.00.png -./doc/docs/images/ring_freq_vs_resolution.png -./doc/docs/images/multilevel_meep_n0_37_spectra.png -./doc/docs/images/ring_matfunc_freq_vs_resolution.png -./doc/docs/images/Near2far_simulation_geometry.png -./doc/docs/images/ring_subpixel_smoothing_rate.png -./doc/docs/images/N2ff_comp_cell.png -./doc/docs/images/pml_glancing_field.png -./doc/docs/images/meep_salt_comparison_full.png -./doc/docs/images/refl_coeff_vs_taper_length.png -./doc/docs/images/Holey-wvg-bands-eps-000000.00.png -./doc/docs/images/polarization_grating_diffraction_spectra.png -./doc/docs/images/Python-Tutorial-wvg-straight-eps-000000.00.png -./doc/docs/images/eigenmode_planewave.png -./doc/docs/images/Meep-logo.png -./doc/docs/images/parallel_benchmark_runtime_vs_nprocs.png -./doc/docs/images/Source_radiation_pattern.png -./doc/docs/images/C2_symmetry.png -./doc/docs/images/metasurface_lens_farfield.png -./doc/docs/images/power_density_cell.png -./doc/docs/images/Metalcavity_ldos.png -./doc/docs/images/ring_vary_radius.png -./doc/docs/images/Holey-wvg-cavity-hz.gif -./doc/docs/images/Python-Tutorial-wvg-straight-ez-000200.00.png -./doc/docs/images/adaptive_chunk_layout.gif -./doc/docs/images/chunk_division_binary_tree.png -./doc/docs/images/Dblocks-config.jpg -./doc/docs/images/Chunks_NP1.png -./doc/docs/images/Spheres-plane.jpg -./doc/docs/images/prism_epsilon.png -./doc/docs/images/dipole_extraction_eff_3D.png -./doc/docs/images/waveguide_rotation_glancing.png -./doc/docs/images/LED_layout_reciprocity.png -./doc/docs/images/Ring-cyl-ez-0.176.png -./doc/docs/images/polarization_grating_schematic.png -./doc/docs/images/LED_layout.png -./doc/docs/images/grating_diffraction_spectra.png -./doc/docs/images/Chunks_XYSymmetry.png -./doc/docs/images/parallel_benchmark_timestep.png -./doc/docs/images/cwsrc_turnon.png -./doc/docs/images/chunk_balancer_timing_stats.gif -./doc/docs/images/Chunks_NP8.png -./doc/docs/images/Repulsive.jpg -./doc/docs/images/Faraday-rotation.png -./doc/docs/images/Fabryperot.gif -./doc/docs/images/Material-dispersion-bands.png -./doc/docs/images/Tut-ring-ez-0.147.gif -./doc/docs/images/subpixel_smoothing.png -./doc/docs/images/Tutorial-wvg-straight-eps-000000.00.png -./doc/docs/images/Tut-holey-cavity.png -./doc/docs/images/Holey-wvg-kx=0.10-w=0.4811.gif -./doc/docs/images/farfields_vs_DFTfields_holeycavity.png -./doc/docs/images/Example.jpg -./doc/docs/Replacements.vim -./doc/docs/Units_and_Nonlinearity.md -./doc/docs/License_and_Copyright.md -./doc/docs/Parallel_Meep.md -./doc/docs/Mode_Decomposition.md -./doc/docs/Subpixel_Smoothing.md -./doc/docs/Build_From_Source.md -./doc/docs/FAQ.md -./doc/docs/mathjaxhelper.js -./doc/docs/Synchronizing_the_Magnetic_and_Electric_Fields.md -./doc/docs/Perfectly_Matched_Layer.md -./doc/docs/2d_Cell_Special_kz.md -./doc/docs/Python_Developer_Information.md -./doc/docs/The_Run_Function_Is_Not_A_Loop.md -./doc/docs/Installation.md -./doc/docs/Materials.md -./doc/docs/Download.md -./doc/docs/mdx_math.py -./doc/docs/setup.py -./doc/docs/index.md -./doc/docs/Developer_Codes -./doc/docs/Developer_Codes/WriteChunkInfo.cpp -./doc/docs/Developer_Codes/Makefile.manual -./doc/docs/C++_Tutorial.md -./doc/docs/Chunks_and_Symmetry.md -./doc/docs/css -./doc/docs/css/extra.css -./doc/docs/Python_Tutorials -./doc/docs/Python_Tutorials/Adjoint_Solver.md -./doc/docs/Python_Tutorials/Custom_Source.md -./doc/docs/Python_Tutorials/Gyrotropic_Media.md -./doc/docs/Python_Tutorials/Mode_Decomposition.md -./doc/docs/Python_Tutorials/Basics.md -./doc/docs/Python_Tutorials/Eigenmode_Source.md -./doc/docs/Python_Tutorials/Frequency_Domain_Solver.md -./doc/docs/Python_Tutorials/Near_to_Far_Field_Spectra.md -./doc/docs/Python_Tutorials/Third_Harmonic_Generation.md -./doc/docs/Python_Tutorials/Material_Dispersion.md -./doc/docs/Python_Tutorials/GDSII_Import.md -./doc/docs/Python_Tutorials/Multilevel_Atomic_Susceptibility.md -./doc/docs/Python_Tutorials/Optical_Forces.md -./doc/docs/Python_Tutorials/Resonant_Modes_and_Transmission_in_a_Waveguide_Cavity.md -./doc/docs/Python_Tutorials/Local_Density_of_States.md -./doc/docs/Python_Tutorials/Cylindrical_Coordinates.md -./doc/docs/Introduction.md -./doc/docs/Exploiting_Symmetry.md -./doc/docs/Guile_and_Scheme_Information.md -./doc/docs/Eigensolver_Math.md -./doc/docs/Field_Functions.md -./doc/docs/Yee_Lattice.md -./doc/docs/Scheme_User_Interface.md -./doc/docs/Python_User_Interface.md -./doc/docs/Acknowledgements.md -./doc/docs/Python_User_Interface.md.in -./doc/docs/Scheme_Tutorials -./doc/docs/Scheme_Tutorials/Casimir_Forces.md -./doc/docs/Scheme_Tutorials/Custom_Source.md -./doc/docs/Scheme_Tutorials/Gyrotropic_Media.md -./doc/docs/Scheme_Tutorials/Mode_Decomposition.md -./doc/docs/Scheme_Tutorials/Basics.md -./doc/docs/Scheme_Tutorials/Eigenmode_Source.md -./doc/docs/Scheme_Tutorials/Frequency_Domain_Solver.md -./doc/docs/Scheme_Tutorials/Near_to_Far_Field_Spectra.md -./doc/docs/Scheme_Tutorials/Third_Harmonic_Generation.md -./doc/docs/Scheme_Tutorials/Material_Dispersion.md -./doc/docs/Scheme_Tutorials/Multilevel_Atomic_Susceptibility.md -./doc/docs/Scheme_Tutorials/Optical_Forces.md -./doc/docs/Scheme_Tutorials/Resonant_Modes_and_Transmission_in_a_Waveguide_Cavity.md -./doc/docs/Scheme_Tutorials/Local_Density_of_States.md -./doc/docs/Scheme_Tutorials/Cylindrical_Coordinates.md -./doc/docs/C++_Developer_Information.md -./Makefile -./libpympb -./libpympb/pympb.hpp -./libpympb/Makefile.in -./libpympb/Makefile -./libpympb/Makefile.am -./libpympb/pympb.cpp -./config.guess -./.clang-format -./Makefile.am -./.gitignore -./scheme -./scheme/casimir.scm -./scheme/meep-main.o -./scheme/meep_enum_renames.i -./scheme/examples -./scheme/examples/metasurface_lens_farfield.ctl -./scheme/examples/antenna-radiation.ctl -./scheme/examples/mie-scattering.ctl -./scheme/examples/refl-quartz.ctl -./scheme/examples/material-dispersion.ctl -./scheme/examples/solve-cw.ctl -./scheme/examples/ring.ctl -./scheme/examples/refl-angular-kz2d.ctl -./scheme/examples/wvg_src.ctl -./scheme/examples/mode-coeffs.ctl -./scheme/examples/chirped-pulse.ctl -./scheme/examples/binary_grating_oblique.ctl -./scheme/examples/parallel-wvgs-mpb.ctl -./scheme/examples/mode-decomposition.ctl -./scheme/examples/finite_grating.ctl -./scheme/examples/absorbed-power-density.ctl -./scheme/examples/pw-source.ctl -./scheme/examples/multilevel-atom.ctl -./scheme/examples/holey-wvg-bands.ctl -./scheme/examples/3rd-harm-1d.ctl -./scheme/examples/holey-wvg-cavity.ctl -./scheme/examples/group-velocity.ctl -./scheme/examples/bent-waveguide.ctl -./scheme/examples/oblique-source.ctl -./scheme/examples/metal-cavity-ldos.ctl -./scheme/examples/metasurface_lens_phasemap.ctl -./scheme/examples/refl-angular.ctl -./scheme/examples/oblique-planewave.ctl -./scheme/examples/binary_grating_n2f.ctl -./scheme/examples/perturbation-theory-2d.ctl -./scheme/examples/polarization_grating.ctl -./scheme/examples/gaussian-beam.ctl -./scheme/examples/ring-cyl.ctl -./scheme/examples/cylinder-cross-section.ctl -./scheme/examples/binary_grating.ctl -./scheme/examples/perturbation-theory.ctl -./scheme/examples/cherenkov-radiation.ctl -./scheme/examples/parallel-wvgs-force.ctl -./scheme/examples/differential-cross-section.ctl -./scheme/examples/straight-waveguide.ctl -./scheme/examples/binary_grating_phasemap.ctl -./scheme/examples/zone-plate.ctl -./scheme/examples/bend-flux.ctl -./scheme/examples/cavity-farfield.ctl -./scheme/examples/stochastic-emitter.ctl -./scheme/examples/faraday-rotation.ctl -./scheme/meep_wrap.cxx -./scheme/meep_wrap.cxx.orig -./scheme/meep-ctl-swig.hpp -./scheme/ctl-io.i -./scheme/meep_op_renames.i -./scheme/meep.scm.in -./scheme/ctl-io.h -./scheme/Makefile.in -./scheme/meep-ctl.hpp -./scheme/meep.scm -./scheme/meep.cpp -./scheme/Makefile -./scheme/meep-ctl-io.o -./scheme/Makefile.am -./scheme/materials.scm -./scheme/meep_renames.i -./scheme/ctl-io.cpp -./scheme/meep -./scheme/meep-ctl-const.hpp -./scheme/structure.cpp -./scheme/main.cpp -./scheme/.libs -./scheme/.libs/meep -./scheme/meep_wrap.patch -./scheme/meep_wrap.cxx.bak -./scheme/meep-meep.o -./scheme/meep.i -./scheme/meep-structure.o -./scheme/meep-geom.o -./scheme/meep-meep_wrap.o -./scheme/meep_swig_bug_workaround.i -./scheme/meep-enums.scm -./scheme/geom.cpp -./README.md -./version.sh -./index.md -./.flake8 +./mkdocs.yml +./contrib +./contrib/build-meep.sh +./stamp-h1 ./.pre-commit-config.yaml +./config.sub ./debian -./debian/meep-mpi-default.1 -./debian/python3-meep-mpi-default.install +./debian/libmeep-mpi-default-dev.install +./debian/libmeep-mpi-default30.lintian-overrides ./debian/changelog -./debian/not-installed +./debian/python3-meep-mpi-default +./debian/python3-meep-mpi-default/usr +./debian/python3-meep-mpi-default/usr/share +./debian/python3-meep-mpi-default/usr/share/doc +./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default +./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default/changelog +./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default/changelog.Debian +./debian/meep-mpi-default.manpages +./debian/python3-meep-mpi-default.prerm +./debian/autoreconf.before +./debian/meep-mpi-default +./debian/meep-mpi-default/usr +./debian/meep-mpi-default/usr/share +./debian/meep-mpi-default/usr/share/doc +./debian/meep-mpi-default/usr/share/doc/meep-mpi-default +./debian/meep-mpi-default/usr/share/doc/meep-mpi-default/changelog +./debian/meep-mpi-default/usr/share/doc/meep-mpi-default/changelog.Debian +./debian/rules +./debian/README.source +./debian/control +./debian/meep-mpi-default.1 +./debian/python3-meep-mpi-default.debhelper.log +./debian/libmeep-mpi-default30.install ./debian/.debhelper ./debian/.debhelper/generated -./debian/.debhelper/generated/libmeep-mpi-default30 -./debian/.debhelper/generated/libmeep-mpi-default30/dh_installchangelogs.dch.trimmed -./debian/.debhelper/generated/libmeep-mpi-default-dev -./debian/.debhelper/generated/libmeep-mpi-default-dev/dh_installchangelogs.dch.trimmed +./debian/.debhelper/generated/python3-meep-mpi-default +./debian/.debhelper/generated/python3-meep-mpi-default/dh_installchangelogs.dch.trimmed +./debian/.debhelper/generated/meep-mpi-default +./debian/.debhelper/generated/meep-mpi-default/dh_installchangelogs.dch.trimmed ./debian/.debhelper/generated/_source ./debian/.debhelper/generated/_source/home ./debian/.debhelper/generated/_source/home/.cache @@ -3911,185 +3717,415 @@ ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-4-4.6/usr/share/libctl ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-4-4.6/usr/share/libctl/base ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-4-4.6/usr/share/libctl/base/include.scm.go -./debian/.debhelper/generated/meep-mpi-default -./debian/.debhelper/generated/meep-mpi-default/dh_installchangelogs.dch.trimmed -./debian/.debhelper/generated/python3-meep-mpi-default -./debian/.debhelper/generated/python3-meep-mpi-default/dh_installchangelogs.dch.trimmed -./debian/libmeep-mpi-default30 -./debian/libmeep-mpi-default30/usr -./debian/libmeep-mpi-default30/usr/share -./debian/libmeep-mpi-default30/usr/share/doc -./debian/libmeep-mpi-default30/usr/share/doc/libmeep-mpi-default30 -./debian/libmeep-mpi-default30/usr/share/doc/libmeep-mpi-default30/changelog -./debian/libmeep-mpi-default30/usr/share/doc/libmeep-mpi-default30/changelog.Debian -./debian/libmeep-mpi-default-dev -./debian/libmeep-mpi-default-dev/usr -./debian/libmeep-mpi-default-dev/usr/share -./debian/libmeep-mpi-default-dev/usr/share/doc -./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev -./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev/changelog -./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev/changelog.Debian -./debian/meep-mpi-default.debhelper.log -./debian/autoreconf.after -./debian/python3-meep-mpi-default.postinst -./debian/meep-mpi-default.install -./debian/meep-mpi-default.manpages -./debian/debhelper-build-stamp -./debian/meep-mpi-default -./debian/meep-mpi-default/usr -./debian/meep-mpi-default/usr/share -./debian/meep-mpi-default/usr/share/doc -./debian/meep-mpi-default/usr/share/doc/meep-mpi-default -./debian/meep-mpi-default/usr/share/doc/meep-mpi-default/changelog -./debian/meep-mpi-default/usr/share/doc/meep-mpi-default/changelog.Debian -./debian/python3-meep-mpi-default.debhelper.log -./debian/libmeep-mpi-default-dev.install -./debian/README.source +./debian/.debhelper/generated/libmeep-mpi-default30 +./debian/.debhelper/generated/libmeep-mpi-default30/dh_installchangelogs.dch.trimmed +./debian/.debhelper/generated/libmeep-mpi-default-dev +./debian/.debhelper/generated/libmeep-mpi-default-dev/dh_installchangelogs.dch.trimmed ./debian/tmp ./debian/tmp/usr -./debian/tmp/usr/include -./debian/tmp/usr/include/meep.hpp -./debian/tmp/usr/include/meep -./debian/tmp/usr/include/meep/adjust_verbosity.hpp -./debian/tmp/usr/include/meep/vec.hpp -./debian/tmp/usr/include/meep/meep-config.h -./debian/tmp/usr/include/meep/material_data.hpp -./debian/tmp/usr/include/meep/mympi.hpp -./debian/tmp/usr/include/meep/meepgeom.hpp ./debian/tmp/usr/lib +./debian/tmp/usr/lib/i386-linux-gnu +./debian/tmp/usr/lib/i386-linux-gnu/libmeep.la +./debian/tmp/usr/lib/i386-linux-gnu/pkgconfig +./debian/tmp/usr/lib/i386-linux-gnu/pkgconfig/meep.pc +./debian/tmp/usr/lib/i386-linux-gnu/libmeep.so.30 +./debian/tmp/usr/lib/i386-linux-gnu/libmeep.a +./debian/tmp/usr/lib/i386-linux-gnu/libmeep.so +./debian/tmp/usr/lib/i386-linux-gnu/libmeep.so.30.0.0 ./debian/tmp/usr/lib/python3.11 ./debian/tmp/usr/lib/python3.11/site-packages ./debian/tmp/usr/lib/python3.11/site-packages/meep -./debian/tmp/usr/lib/python3.11/site-packages/meep/source.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.a +./debian/tmp/usr/lib/python3.11/site-packages/meep/verbosity_mgr.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/timing_measurements.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30.0.0 ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/optimization_problem.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/basis.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/connectivity.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/filter_source.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__ ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/wrapper.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filter_source.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/objective.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filters.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/basis.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/utils.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/connectivity.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filters.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filter_source.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/__init__.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filter_source.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/objective.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/utils.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/wrapper.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/__init__.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filters.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/basis.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/basis.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/connectivity.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/__init__.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/wrapper.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/wrapper.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/objective.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/utils.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/utils.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filter_source.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/utils.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/wrapper.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__init__.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/filters.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/optimization_problem.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/wrapper.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/connectivity.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/objective.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/filter_source.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.la ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__ -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/verbosity_mgr.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/timing_measurements.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/visualization.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/source.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/materials.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/chunk_balancer.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/verbosity_mgr.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/source.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/__init__.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/timing_measurements.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/timing_measurements.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/source.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/simulation.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/binary_partition_utils.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/geom.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/__init__.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/binary_partition_utils.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/materials.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/verbosity_mgr.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/visualization.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/chunk_balancer.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/__init__.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/simulation.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/geom.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/geom.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/simulation.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/binary_partition_utils.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/source.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/visualization.cpython-311.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/timing_measurements.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/materials.cpython-311.opt-1.pyc -./debian/tmp/usr/lib/python3.11/site-packages/meep/chunk_balancer.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/visualization.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/simulation.cpython-311.opt-1.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/chunk_balancer.cpython-311.pyc +./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.a ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so -./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.la -./debian/tmp/usr/lib/python3.11/site-packages/meep/binary_partition_utils.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/visualization.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/verbosity_mgr.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/geom.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30.0.0 ./debian/tmp/usr/lib/python3.11/site-packages/meep/materials.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/timing_measurements.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/chunk_balancer.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/__init__.py -./debian/tmp/usr/lib/python3.11/site-packages/meep/simulation.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30 -./debian/tmp/usr/lib/i386-linux-gnu -./debian/tmp/usr/lib/i386-linux-gnu/libmeep.so.30 -./debian/tmp/usr/lib/i386-linux-gnu/libmeep.la -./debian/tmp/usr/lib/i386-linux-gnu/libmeep.so -./debian/tmp/usr/lib/i386-linux-gnu/libmeep.a -./debian/tmp/usr/lib/i386-linux-gnu/libmeep.so.30.0.0 -./debian/tmp/usr/lib/i386-linux-gnu/pkgconfig -./debian/tmp/usr/lib/i386-linux-gnu/pkgconfig/meep.pc -./debian/tmp/usr/bin -./debian/tmp/usr/bin/meep +./debian/tmp/usr/lib/python3.11/site-packages/meep/geom.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/binary_partition_utils.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/source.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/visualization.py +./debian/tmp/usr/lib/python3.11/site-packages/meep/simulation.py ./debian/tmp/usr/share ./debian/tmp/usr/share/meep ./debian/tmp/usr/share/meep/casimir.scm ./debian/tmp/usr/share/meep/meep.scm -./debian/tmp/usr/share/meep/materials.scm ./debian/tmp/usr/share/meep/meep-enums.scm -./debian/libmeep-mpi-default30.install +./debian/tmp/usr/share/meep/materials.scm +./debian/tmp/usr/include +./debian/tmp/usr/include/meep +./debian/tmp/usr/include/meep/vec.hpp +./debian/tmp/usr/include/meep/mympi.hpp +./debian/tmp/usr/include/meep/material_data.hpp +./debian/tmp/usr/include/meep/adjust_verbosity.hpp +./debian/tmp/usr/include/meep/meepgeom.hpp +./debian/tmp/usr/include/meep/meep-config.h +./debian/tmp/usr/include/meep.hpp +./debian/tmp/usr/bin +./debian/tmp/usr/bin/meep +./debian/python3-meep-mpi-default.postinst ./debian/libmeep-mpi-default30.debhelper.log -./debian/control -./debian/meep-mpi-default.docs -./debian/watch -./debian/python3-meep-mpi-default -./debian/python3-meep-mpi-default/usr -./debian/python3-meep-mpi-default/usr/share -./debian/python3-meep-mpi-default/usr/share/doc -./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default -./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default/changelog -./debian/python3-meep-mpi-default/usr/share/doc/python3-meep-mpi-default/changelog.Debian -./debian/patches -./debian/patches/series -./debian/patches/i386-fix.patch -./debian/autoreconf.before -./debian/rules +./debian/libmeep-mpi-default-dev.debhelper.log +./debian/autoreconf.after +./debian/libmeep-mpi-default30 +./debian/libmeep-mpi-default30/usr +./debian/libmeep-mpi-default30/usr/share +./debian/libmeep-mpi-default30/usr/share/doc +./debian/libmeep-mpi-default30/usr/share/doc/libmeep-mpi-default30 +./debian/libmeep-mpi-default30/usr/share/doc/libmeep-mpi-default30/changelog +./debian/libmeep-mpi-default30/usr/share/doc/libmeep-mpi-default30/changelog.Debian +./debian/libmeep-mpi-default-dev +./debian/libmeep-mpi-default-dev/usr +./debian/libmeep-mpi-default-dev/usr/share +./debian/libmeep-mpi-default-dev/usr/share/doc +./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev +./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev/changelog +./debian/libmeep-mpi-default-dev/usr/share/doc/libmeep-mpi-default-dev/changelog.Debian +./debian/python3-meep-mpi-default.install ./debian/docs -./debian/python3-meep-mpi-default.prerm ./debian/copyright -./debian/libmeep-mpi-default-dev.debhelper.log +./debian/meep-mpi-default.debhelper.log +./debian/watch ./debian/source -./debian/source/format ./debian/source/lintian-overrides -./debian/libmeep-mpi-default30.lintian-overrides -./meep-pkgconfig -./meep.pc -./.gitattributes +./debian/source/format +./debian/meep-mpi-default.install +./debian/meep-mpi-default.docs +./debian/patches +./debian/patches/i386-fix.patch +./debian/patches/series +./debian/debhelper-build-stamp +./debian/not-installed +./version.sh +./doc +./doc/_api_snippets +./doc/_api_snippets/class_template.md +./doc/_api_snippets/method_template.md +./doc/_api_snippets/function_template.md +./doc/README.md +./doc/requirements.txt +./doc/docs +./doc/docs/License_and_Copyright.md +./doc/docs/Field_Functions.md +./doc/docs/Python_User_Interface.md.in +./doc/docs/setup.py +./doc/docs/index.md +./doc/docs/The_Run_Function_Is_Not_A_Loop.md +./doc/docs/Installation.md +./doc/docs/mdx_math.py +./doc/docs/C++_Tutorial.md +./doc/docs/Units_and_Nonlinearity.md +./doc/docs/Python_Developer_Information.md +./doc/docs/Python_User_Interface.md +./doc/docs/css +./doc/docs/css/extra.css +./doc/docs/Replacements.vim +./doc/docs/Developer_Codes +./doc/docs/Developer_Codes/Makefile.manual +./doc/docs/Developer_Codes/WriteChunkInfo.cpp +./doc/docs/Build_From_Source.md +./doc/docs/Chunks_and_Symmetry.md +./doc/docs/Acknowledgements.md +./doc/docs/Subpixel_Smoothing.md +./doc/docs/Perfectly_Matched_Layer.md +./doc/docs/mathjaxhelper.js +./doc/docs/Guile_and_Scheme_Information.md +./doc/docs/C++_Developer_Information.md +./doc/docs/Introduction.md +./doc/docs/Parallel_Meep.md +./doc/docs/Mode_Decomposition.md +./doc/docs/Scheme_User_Interface.md +./doc/docs/Eigensolver_Math.md +./doc/docs/FAQ.md +./doc/docs/Yee_Lattice.md +./doc/docs/Scheme_Tutorials +./doc/docs/Scheme_Tutorials/Multilevel_Atomic_Susceptibility.md +./doc/docs/Scheme_Tutorials/Casimir_Forces.md +./doc/docs/Scheme_Tutorials/Frequency_Domain_Solver.md +./doc/docs/Scheme_Tutorials/Third_Harmonic_Generation.md +./doc/docs/Scheme_Tutorials/Resonant_Modes_and_Transmission_in_a_Waveguide_Cavity.md +./doc/docs/Scheme_Tutorials/Optical_Forces.md +./doc/docs/Scheme_Tutorials/Gyrotropic_Media.md +./doc/docs/Scheme_Tutorials/Cylindrical_Coordinates.md +./doc/docs/Scheme_Tutorials/Custom_Source.md +./doc/docs/Scheme_Tutorials/Mode_Decomposition.md +./doc/docs/Scheme_Tutorials/Near_to_Far_Field_Spectra.md +./doc/docs/Scheme_Tutorials/Material_Dispersion.md +./doc/docs/Scheme_Tutorials/Local_Density_of_States.md +./doc/docs/Scheme_Tutorials/Basics.md +./doc/docs/Scheme_Tutorials/Eigenmode_Source.md +./doc/docs/Materials.md +./doc/docs/Exploiting_Symmetry.md +./doc/docs/Synchronizing_the_Magnetic_and_Electric_Fields.md +./doc/docs/2d_Cell_Special_kz.md +./doc/docs/images +./doc/docs/images/polarization_grating_schematic.png +./doc/docs/images/Python-Tutorial-wvg-straight-ez-000200.00.png +./doc/docs/images/farfields_vs_DFTfields_holeycavity.png +./doc/docs/images/Tut-ring-ez-0.147.gif +./doc/docs/images/Meep-logo.png +./doc/docs/images/Waveguide_forces.png +./doc/docs/images/ChunkStatistics.png +./doc/docs/images/BentFluxGeometryVisualization.png +./doc/docs/images/reflectance_angular_spectrum.png +./doc/docs/images/PermittivityWithLabeledAxes.png +./doc/docs/images/parallel_benchmark_commcomp_vs_nprocs.png +./doc/docs/images/multilevel_meep_n0_37_spectra.png +./doc/docs/images/Ring-cyl-ez-0.176.png +./doc/docs/images/Tut-bend-flux.png +./doc/docs/images/gaussian_beam.png +./doc/docs/images/Dblocks-force.jpg +./doc/docs/images/refl_coeff_vs_taper_length.png +./doc/docs/images/chirped_pulse.png +./doc/docs/images/finite_grating_nperiods20.png +./doc/docs/images/Chunks_NP8.png +./doc/docs/images/Tut-holey-cavity.png +./doc/docs/images/N2ff_comp_cell.png +./doc/docs/images/adaptive_chunk_layout.gif +./doc/docs/images/C2_symmetry.png +./doc/docs/images/LED_layout_reciprocity.png +./doc/docs/images/Example.jpg +./doc/docs/images/LED_layout.png +./doc/docs/images/klayout_schematic.png +./doc/docs/images/Ring-cyl-ez-0.148.png +./doc/docs/images/multi_mode_eigsource_pulse_B.png +./doc/docs/images/Holey-cavity-trans.png +./doc/docs/images/phase-in-material.png +./doc/docs/images/BentFluxFieldsVisualization.png +./doc/docs/images/Tutorial-wvg-bent2-ez-000300.00.png +./doc/docs/images/directional_coupler_field_profiles.png +./doc/docs/images/Tut-ring-ez-0.118.gif +./doc/docs/images/pwsource_Ey_PML.png +./doc/docs/images/pml_glancing_field.png +./doc/docs/images/eigenmode_source.png +./doc/docs/images/grating_0th_order_tran.png +./doc/docs/images/subpixel_smoothing.png +./doc/docs/images/Vac.jpg +./doc/docs/images/Holey-wvg-kx=0.10-w=0.4811.gif +./doc/docs/images/Metalcavity_ldos.png +./doc/docs/images/chunk_balancer_timing_stats.gif +./doc/docs/images/Holey-wvg-kx=0.25-w=0.2506.gif +./doc/docs/images/chunk_division_binary_tree.png +./doc/docs/images/Tutorial-wvg-bent-ez-tslice.png +./doc/docs/images/antenna_pec_ground_plane.png +./doc/docs/images/multi_mode_eigsource_pulse_A.png +./doc/docs/images/CWsolver-python.png +./doc/docs/images/Python-Tutorial-wvg-bent-ez-tslice.png +./doc/docs/images/polarization_grating_diffraction_spectra.png +./doc/docs/images/single_mode_eigsource_pulse.png +./doc/docs/images/Field-visualization.jpg +./doc/docs/images/coupler3D.png +./doc/docs/images/finite_grating_schematic.png +./doc/docs/images/Tutorial-wvg-straight-eps-000000.00.png +./doc/docs/images/ChunkingAndSymmetry.svg +./doc/docs/images/chunk_balancer_variance.jpg +./doc/docs/images/Faraday-rotation.png +./doc/docs/images/residue_fields_bound_charges.png +./doc/docs/images/parallel_benchmark_barplot.png +./doc/docs/images/Holey-wvg-cavity-Q.png +./doc/docs/images/Holey-wvg-cavity-hz-001401.23.png +./doc/docs/images/extraction_eff_vs_dipole_height.png +./doc/docs/images/stochastic_emitter_normalized_flux_comparison.png +./doc/docs/images/Source_radiation_pattern.png +./doc/docs/images/Near2far_simulation_geometry.png +./doc/docs/images/Surface-force.jpg +./doc/docs/images/eigenmode_planewave.png +./doc/docs/images/Dblocks-config.jpg +./doc/docs/images/Tutorial-wvg-ez.gif +./doc/docs/images/waveguide_rotation_glancing.png +./doc/docs/images/Repulsive.jpg +./doc/docs/images/power_density_cell.png +./doc/docs/images/zone_plate_farfield.png +./doc/docs/images/meep_salt_comparison_thresh.png +./doc/docs/images/directional_coupler_flux.png +./doc/docs/images/Material-dispersion-epsim.png +./doc/docs/images/parallel_benchmark_DFT.png +./doc/docs/images/meep_salt_comparison_full.png +./doc/docs/images/ring_resonator_gds_Hz.png +./doc/docs/images/dipole_extraction_eff_cyl.png +./doc/docs/images/Yee-te.png +./doc/docs/images/Holey-wvg-kx=0.4-w=0.1896.gif +./doc/docs/images/power_density_map.png +./doc/docs/images/Chunks_NP1.png +./doc/docs/images/zone_plate_schematic.png +./doc/docs/images/Holey-wvg-bands.png +./doc/docs/images/Tut-ring-ez-0.175.gif +./doc/docs/images/ring_freq_vs_resolution.png +./doc/docs/images/prism_epsilon.png +./doc/docs/images/Holey-wvg-cavity-hz-slice.png +./doc/docs/images/Material-dispersion-bands.png +./doc/docs/images/Material-dispersion-eps.png +./doc/docs/images/grating.png +./doc/docs/images/Tutorial-wvg-straight-ez-000200.00.png +./doc/docs/images/metasurface_lens_phasemap.png +./doc/docs/images/metasurface_lens_epsilon.png +./doc/docs/images/dipole_extraction_eff_3D.png +./doc/docs/images/polarization_grating_diffraction_orders.png +./doc/docs/images/Python-Tutorial-wvg-straight-eps-000000.00.png +./doc/docs/images/farfields_vs_DFTfields_holeycavity_mismatch.png +./doc/docs/images/finite_grating_nperiods5.png +./doc/docs/images/cherenkov_radiation.png +./doc/docs/images/SiO2_materials_library.png +./doc/docs/images/Holey-wvg-bands-eps-000000.00.png +./doc/docs/images/Faraday-rotation-comparison.png +./doc/docs/images/parallel_benchmark_runtime_vs_nprocs.png +./doc/docs/images/mie_scattering.png +./doc/docs/images/ring_matfunc_freq_vs_resolution.png +./doc/docs/images/pwsource_Ez_PML.png +./doc/docs/images/Point-dct.jpg +./doc/docs/images/grating_phasemap.png +./doc/docs/images/coupler_refl_S11_S12.png +./doc/docs/images/stochastic_emitter_trials.png +./doc/docs/images/grating_diffraction_spectra.png +./doc/docs/images/planar_cavity_purcell_enhancement.png +./doc/docs/images/cylinder_cross_section.png +./doc/docs/images/Extruded-blocks.jpg +./doc/docs/images/CWsolver-scheme.png +./doc/docs/images/stochastic_emitter_forward_vs_backward_flux_spectrum.png +./doc/docs/images/oblique_source_singlemode.png +./doc/docs/images/Spheres-plane.jpg +./doc/docs/images/material_grid.png +./doc/docs/images/fused_quartz_reflectance_spectrum.png +./doc/docs/images/Yee-cube.png +./doc/docs/images/line_source_DCT_ampfunc_convergence.png +./doc/docs/images/3rd-harm-1d-vs-chi.png +./doc/docs/images/Material-dispersion-epsre.png +./doc/docs/images/oblique_source_multimode.png +./doc/docs/images/Holey-wvg-cavity-hz.gif +./doc/docs/images/grating_diffraction_spectra_n2f.png +./doc/docs/images/Tutorial-wvg-bent-eps-000000.00.png +./doc/docs/images/metasurface_lens_farfield.png +./doc/docs/images/mie_scattering_schematic.png +./doc/docs/images/Chunks_XYSymmetry.png +./doc/docs/images/output_epsilon_kpoint.png +./doc/docs/images/triangular_lattice.png +./doc/docs/images/swig_process.png +./doc/docs/images/Holey-wvg-cavity-eps-000000.00.png +./doc/docs/images/Holey-wvg-kx=0.4-w=0.3175.gif +./doc/docs/images/Chunks_YSymmetry.png +./doc/docs/images/parallel_wvgs_s0.1.png +./doc/docs/images/3rd-harm-1d-flux.png +./doc/docs/images/Holey-wvg-kx=0.30-w=0.8838.gif +./doc/docs/images/ring_vary_radius.png +./doc/docs/images/Ring-cyl-ez-0.118.png +./doc/docs/images/cwsrc_turnon.png +./doc/docs/images/waveguide_rotation_glancing_small.png +./doc/docs/images/parallel_benchmark_timestep.png +./doc/docs/images/waveguide-taper.png +./doc/docs/images/PML_failure.png +./doc/docs/images/ring_subpixel_smoothing_rate.png +./doc/docs/images/pypackage_creation.png +./doc/docs/images/stochastic_emitter_line_normalized_flux_comparison.png +./doc/docs/images/Meep-banner.png +./doc/docs/images/Fabryperot.gif +./doc/docs/images/sphere_epsilon.png +./doc/docs/Download.md +./doc/docs/Python_Tutorials +./doc/docs/Python_Tutorials/Multilevel_Atomic_Susceptibility.md +./doc/docs/Python_Tutorials/Frequency_Domain_Solver.md +./doc/docs/Python_Tutorials/Third_Harmonic_Generation.md +./doc/docs/Python_Tutorials/Resonant_Modes_and_Transmission_in_a_Waveguide_Cavity.md +./doc/docs/Python_Tutorials/Optical_Forces.md +./doc/docs/Python_Tutorials/GDSII_Import.md +./doc/docs/Python_Tutorials/Gyrotropic_Media.md +./doc/docs/Python_Tutorials/Adjoint_Solver.md +./doc/docs/Python_Tutorials/Cylindrical_Coordinates.md +./doc/docs/Python_Tutorials/Custom_Source.md +./doc/docs/Python_Tutorials/Mode_Decomposition.md +./doc/docs/Python_Tutorials/Near_to_Far_Field_Spectra.md +./doc/docs/Python_Tutorials/Material_Dispersion.md +./doc/docs/Python_Tutorials/Local_Density_of_States.md +./doc/docs/Python_Tutorials/Basics.md +./doc/docs/Python_Tutorials/Eigenmode_Source.md +./doc/generate_py_api.py +./doc/meep-logos.svg +./Makefile ./.github ./.github/dependabot.yml ./.github/workflows +./.github/workflows/build-san.yml ./.github/workflows/pre-commit.yml ./.github/workflows/build-ci.yml -./.github/workflows/build-san.yml -./autogen.sh -./NEWS.md -./py-compile +./compile +./config.guess +./.clang-format ./depcomp -./ltmain.sh +./config.h +./test-driver +./py-compile ./configure -./config.sub -./config.log -./libtool +./COPYRIGHT +./config.h.in +./.travis.yml +./missing +./ltmain.sh ./codecov.yml -./TODO -./.sourcery.yaml -./config.status -./install-sh -./test-driver +./Makefile.in +./add_type_hints.xonsh +./autom4te.cache +./autom4te.cache/traces.0 +./autom4te.cache/traces.3 +./autom4te.cache/output.2 +./autom4te.cache/requests +./autom4te.cache/traces.2 +./autom4te.cache/traces.1 +./autom4te.cache/output.3 +./autom4te.cache/output.1 +./autom4te.cache/output.0 rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.a @@ -4116,18 +4152,18 @@ dh_strip -a dh_makeshlibs -a dh_shlibdeps -a -dpkg-shlibdeps: warning: debian/python3-meep-mpi-default/usr/lib/python3/dist-packages/meep/_meep.so.30.0.0 contains an unresolvable reference to symbol PyImport_ImportModule: it's probably a plugin +dpkg-shlibdeps: warning: debian/python3-meep-mpi-default/usr/lib/python3/dist-packages/meep/_meep.so.30.0.0 contains an unresolvable reference to symbol PyFunction_Type: it's probably a plugin dpkg-shlibdeps: warning: 106 other similar warnings have been skipped (use -v to see them all) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libmeep-mpi-default-dev' in '../libmeep-mpi-default-dev_1.25.0-2_i386.deb'. +dpkg-deb: building package 'libmeep-mpi-default30' in '../libmeep-mpi-default30_1.25.0-2_i386.deb'. dpkg-deb: building package 'python3-meep-mpi-default-dbgsym' in '../python3-meep-mpi-default-dbgsym_1.25.0-2_i386.deb'. dpkg-deb: building package 'meep-mpi-default' in '../meep-mpi-default_1.25.0-2_i386.deb'. -dpkg-deb: building package 'libmeep-mpi-default30' in '../libmeep-mpi-default30_1.25.0-2_i386.deb'. -dpkg-deb: building package 'meep-mpi-default-dbgsym' in '../meep-mpi-default-dbgsym_1.25.0-2_i386.deb'. dpkg-deb: building package 'libmeep-mpi-default30-dbgsym' in '../libmeep-mpi-default30-dbgsym_1.25.0-2_i386.deb'. +dpkg-deb: building package 'meep-mpi-default-dbgsym' in '../meep-mpi-default-dbgsym_1.25.0-2_i386.deb'. dpkg-deb: building package 'python3-meep-mpi-default' in '../python3-meep-mpi-default_1.25.0-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../meep-mpi-default_1.25.0-2_i386.buildinfo dpkg-genchanges --build=binary -O../meep-mpi-default_1.25.0-2_i386.changes @@ -4136,12 +4172,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15564/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4703 and its subdirectories -I: Current time: Sun Jun 22 11:36:20 -12 2025 -I: pbuilder-time-stamp: 1750635380 +I: removing directory /srv/workspace/pbuilder/15564 and its subdirectories +I: Current time: Tue May 21 07:28:28 +14 2024 +I: pbuilder-time-stamp: 1716226108