Diff of the two buildlogs: -- --- b1/build.log 2024-04-29 14:29:32.189686251 +0000 +++ b2/build.log 2024-04-29 14:38:29.618808465 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jun 1 08:50:22 -12 2025 -I: pbuilder-time-stamp: 1748811022 +I: Current time: Tue Apr 30 04:29:35 +14 2024 +I: pbuilder-time-stamp: 1714400975 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -35,54 +35,86 @@ dpkg-source: info: applying closing_writer_in_tests.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/118774/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 29 14:29 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='ed42cf3da55d4b5eaab0c9541f934afd' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='118774' - PS1='# ' - PS2='> ' + INVOCATION_ID=c30cc51cc3e0490daa3c194473f0efab + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=14223 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.f2QpObmi/pbuilderrc_JodV --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.f2QpObmi/b1 --logfile b1/build.log libsis-jhdf5-java_19.04.1+dfsg-4.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.f2QpObmi/pbuilderrc_CgXI --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.f2QpObmi/b2 --logfile b2/build.log libsis-jhdf5-java_19.04.1+dfsg-4.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos6-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 26 17:47 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/118774/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 21 07:13 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -868,7 +900,7 @@ Get: 389 http://deb.debian.org/debian trixie/main i386 libjmock2-java all 2.12.0-1 [118 kB] Get: 390 http://deb.debian.org/debian trixie/main i386 libsis-base-jni i386 18.09~pre1+git20180928.45fbd31+dfsg-3 [13.7 kB] Get: 391 http://deb.debian.org/debian trixie/main i386 libsis-base-java all 18.09~pre1+git20180928.45fbd31+dfsg-3 [97.8 kB] -Fetched 358 MB in 5s (75.4 MB/s) +Fetched 358 MB in 8s (45.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libdb5.3:i386: dependency problems, but removing anyway as you requested: libperl5.38:i386 depends on libdb5.3. @@ -2151,8 +2183,8 @@ Setting up tzdata (2024a-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Jun 1 20:51:16 UTC 2025. -Universal Time is now: Sun Jun 1 20:51:16 UTC 2025. +Local time is now: Mon Apr 29 14:32:40 UTC 2024. +Universal Time is now: Mon Apr 29 14:32:40 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... @@ -2677,7 +2709,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libsis-jhdf5-java_19.04.1+dfsg-4_source.changes +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libsis-jhdf5-java_19.04.1+dfsg-4_source.changes dpkg-buildpackage: info: source package libsis-jhdf5-java dpkg-buildpackage: info: source version 19.04.1+dfsg-4 dpkg-buildpackage: info: source distribution unstable @@ -2707,7 +2743,7 @@ dh_auto_build mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ - gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=libsis-jhdf5-java -Dfile.encoding=UTF-8 --parallel --max-workers=22 jar + gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=libsis-jhdf5-java -Dfile.encoding=UTF-8 --parallel --max-workers=10 jar openjdk version "17.0.10" 2024-01-16 OpenJDK Runtime Environment (build 17.0.10+7-Debian-1) OpenJDK Server VM (build 17.0.10+7-Debian-1, mixed mode, sharing) @@ -2715,12 +2751,12 @@ To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' -An attempt to start the daemon took 0.768 secs. -The client will now receive all logging from the daemon (pid: 129567). The daemon log file: /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/daemon/4.4.1/daemon-129567.out.log +An attempt to start the daemon took 5.052 secs. +The client will now receive all logging from the daemon (pid: 37940). The daemon log file: /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/daemon/4.4.1/daemon-37940.out.log Daemon will be stopped at the end of the build stopping after processing Closing daemon's stdin at end of input. The daemon will no longer process any standard input. -Using 22 worker leases. +Using 10 worker leases. Creating new cache for fileHashes, path /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@b07d97 Creating new cache for resourceHashesCache, path /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@b07d97 Creating new cache for fileHashes, path /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@7deb46 @@ -3025,55 +3061,60 @@ Creating new cache for resourceHashesCache, path /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@7deb46 Creating new cache for taskHistory, path /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@da1e05 Creating new cache for outputFiles, path /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@1100a3c -:sourcesJar (Thread[Task worker for ':',5,main]) started. +:sourcesJar (Thread[Task worker for ':' Thread 2,5,main]) started. :sourcesJar Putting task artifact state for task ':sourcesJar' into context took 0.006 secs. file or directory '/build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/src/main/resources', not found file or directory '/build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/src/main/resources', not found -Up-to-date check for task ':sourcesJar' took 0.178 secs. It is not up-to-date because: +Up-to-date check for task ':sourcesJar' took 4.726 secs. It is not up-to-date because: No history is available. file or directory '/build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/src/main/resources', not found -:sourcesJar (Thread[Task worker for ':',5,main]) completed. Took 0.358 secs. -:compileJava (Thread[Task worker for ':',5,main]) started. +:sourcesJar (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 5.477 secs. +:compileJava (Thread[Task worker for ':' Thread 2,5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.0 secs. -Up-to-date check for task ':compileJava' took 9.869 secs. It is not up-to-date because: +Up-to-date check for task ':compileJava' took 38.025 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileJava'. Compiling with Java command line compiler 'java'. Starting process 'command 'java''. Working directory: /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg Command: java -cp /usr/share/java/eclipse-jdt-core.jar:/usr/share/java/eclipse-jdt-compiler-apt.jar org.eclipse.jdt.internal.compiler.batch.Main -nowarn @/build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/targets/gradle/tmp/compileJava/java-compiler-args.txt Successfully started process 'command 'java'' -invalid Class-Path header in manifest of jar file: /usr/share/java/js-1.7.14.jar -invalid Class-Path header in manifest of jar file: /usr/share/java/jzlib-1.1.3.jar -invalid Class-Path header in manifest of jar file: /usr/share/java/osgi.annotation-8.1.0.jar invalid Class-Path header in manifest of jar file: /usr/share/maven-repo/org/debian/maven/maven-repo-helper/debian/maven-repo-helper-debian.jar -:compileJava (Thread[Task worker for ':',5,main]) completed. Took 14.012 secs. -:processResources (Thread[Task worker for ':',5,main]) started. +invalid Class-Path header in manifest of jar file: /usr/share/java/osgi.annotation-8.1.0.jar +invalid Class-Path header in manifest of jar file: /usr/share/java/jzlib-1.1.3.jar +invalid Class-Path header in manifest of jar file: /usr/share/java/js-1.7.14.jar +# +# There is insufficient memory for the Java Runtime Environment to continue. +# Native memory allocation (malloc) failed to allocate 1342177288 bytes for Chunk::new +# An error report file with more information is saved as: +# /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/hs_err_pid41596.log +:compileJava (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 1 mins 9.392 secs. +:processResources (Thread[Task worker for ':' Thread 2,5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. file or directory '/build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/src/main/resources', not found Skipping task ':processResources' as it has no source files and no previous output files. :processResources NO-SOURCE -:processResources (Thread[Task worker for ':',5,main]) completed. Took 0.004 secs. -:classes (Thread[Task worker for ':',5,main]) started. +:processResources (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.049 secs. +:classes (Thread[Task worker for ':' Thread 2,5,main]) started. :classes Skipping task ':classes' as it has no actions. -:classes (Thread[Task worker for ':',5,main]) completed. Took 0.0 secs. -:debianMavenPom (Thread[Task worker for ':',5,main]) started. +:classes (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.001 secs. +:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) started. :debianMavenPom Putting task artifact state for task ':debianMavenPom' into context took 0.0 secs. -Up-to-date check for task ':debianMavenPom' took 0.0 secs. It is not up-to-date because: +Up-to-date check for task ':debianMavenPom' took 0.008 secs. It is not up-to-date because: No history is available. Generating pom file /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/targets/gradle/debian/libsis-jhdf5-java.pom -:debianMavenPom (Thread[Task worker for ':',5,main]) completed. Took 0.064 secs. -:jar (Thread[Task worker for ':',5,main]) started. +:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.302 secs. +:jar (Thread[Task worker for ':' Thread 2,5,main]) started. :jar Putting task artifact state for task ':jar' into context took 0.0 secs. -Up-to-date check for task ':jar' took 0.014 secs. It is not up-to-date because: +Up-to-date check for task ':jar' took 0.102 secs. It is not up-to-date because: No history is available. -:jar (Thread[Task worker for ':',5,main]) completed. Took 0.266 secs. +:jar (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.901 secs. -BUILD SUCCESSFUL in 19s +BUILD SUCCESSFUL in 1m 39s 4 actionable tasks: 4 executed # The jar needed by the h5ar wrapper is not built by the call to gradle. # We thus do it manually. @@ -3082,24 +3123,6 @@ warning: [options] source value 7 is obsolete and will be removed in a future release warning: [options] target value 7 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. -source/java/hdf/hdf5lib/HDFNativeData.java:447: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal - retobj = new Integer(i[0]); - ^ -source/java/hdf/hdf5lib/HDFNativeData.java:450: warning: [removal] Byte(byte) in Byte has been deprecated and marked for removal - retobj = new Byte(barray[0]); - ^ -source/java/hdf/hdf5lib/HDFNativeData.java:455: warning: [removal] Short(short) in Short has been deprecated and marked for removal - retobj = new Short(f[0]); - ^ -source/java/hdf/hdf5lib/HDFNativeData.java:460: warning: [removal] Float(float) in Float has been deprecated and marked for removal - retobj = new Float(f[0]); - ^ -source/java/hdf/hdf5lib/HDFNativeData.java:464: warning: [removal] Long(long) in Long has been deprecated and marked for removal - retobj = new Long(f[0]); - ^ -source/java/hdf/hdf5lib/HDFNativeData.java:469: warning: [removal] Double(double) in Double has been deprecated and marked for removal - retobj = new Double(f[0]); - ^ source/java/hdf/hdf5lib/HDFArray.java:758: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal out[i] = new Integer(in[i]); ^ @@ -3136,6 +3159,24 @@ source/java/hdf/hdf5lib/HDFArray.java:926: warning: [removal] Long(long) in Long has been deprecated and marked for removal out[i] = new Long(in[i]); ^ +source/java/hdf/hdf5lib/HDFNativeData.java:447: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal + retobj = new Integer(i[0]); + ^ +source/java/hdf/hdf5lib/HDFNativeData.java:450: warning: [removal] Byte(byte) in Byte has been deprecated and marked for removal + retobj = new Byte(barray[0]); + ^ +source/java/hdf/hdf5lib/HDFNativeData.java:455: warning: [removal] Short(short) in Short has been deprecated and marked for removal + retobj = new Short(f[0]); + ^ +source/java/hdf/hdf5lib/HDFNativeData.java:460: warning: [removal] Float(float) in Float has been deprecated and marked for removal + retobj = new Float(f[0]); + ^ +source/java/hdf/hdf5lib/HDFNativeData.java:464: warning: [removal] Long(long) in Long has been deprecated and marked for removal + retobj = new Long(f[0]); + ^ +source/java/hdf/hdf5lib/HDFNativeData.java:469: warning: [removal] Double(double) in Double has been deprecated and marked for removal + retobj = new Double(f[0]); + ^ Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: source/java/ch/systemsx/cisd/hdf5/HDF5CompoundMemberByteifyerEnumArrayFactory.java uses unchecked or unsafe operations. @@ -3418,7 +3459,7 @@ # instance if ``+dfsg'' is part of it. mktemp -d returns a path fitting this # requirement. # See above target for the rationale behind GENERATEDJARPATH. -TESTSOURCEDIR=/tmp/tmp.Nxyfyo38lO ; \ +TESTSOURCEDIR=/tmp/tmp.CF43bol0iK ; \ cp -r sourceTest/ $TESTSOURCEDIR ; \ GENERATEDJARPATH="targets/gradle/libs/$(ls -l targets/gradle/libs/ | grep 'sis-jhdf5-[0-9]*.jar' | awk '{print $9}')" ; \ export CLASSPATH="$TESTSOURCEDIR/sourceTest/java:`readlink -f $GENERATEDJARPATH`:/usr/share/java/junit4.jar:/usr/share/java/testng.jar:/usr/share/java/jmock2.jar:/usr/share/java/jcommander.jar:/usr/share/java/sis-base.jar:/usr/share/java/commons-lang3.jar:/usr/share/java/commons-io.jar:/usr/share/java/sis-base.jar" \ @@ -3436,6 +3477,24 @@ sourceTest/java/ch/systemsx/cisd/hdf5/h5ar/test_14_12_0.h5ar [Utils] Attempting to create /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/test-output/All/All.xml [Utils] Directory /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/test-output/All exists: true +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@211483) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1ff3c4b) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@72208d) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1bd8bc9) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1e004f1) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1d56062) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@26461d) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@11c6e13) +PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@36364d) +PASSED: testBitSetRoundTrip({}) +PASSED: testBitSetRoundTrip({0}) +PASSED: testBitSetRoundTrip({31}) +PASSED: testBitSetRoundTrip({64}) +PASSED: testBitSetRoundTrip({128}) +PASSED: testBitSetRoundTrip({63, 191}) +PASSED: testBitSetRoundTrip({64, 192}) +PASSED: testBitSetRoundTrip({17, 88, 155}) +PASSED: testBitSetRoundTrip({0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255}) PASSED: testAccessClosedReaderWriter PASSED: testAnonCompound PASSED: testAnonymousEnum @@ -3551,11 +3610,11 @@ PASSED: testIterateOverFloatArrayInNaturalBlocks(10, 100) PASSED: testIterateOverFloatArrayInNaturalBlocks(10, 101) PASSED: testIterateOverMDCompoundArrayInNaturalBlocks -PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@109748f, [J@1ecc507, [F@f2f7ad, [[I@d477c2) -PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@85c21b, [J@1def031, [F@e83838, [[I@1832280) -PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@166bab1, [J@10f84d4, [F@df4af5, [[I@e8ff8c) -PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@a76ad2, [J@10d6c76, [F@1791d40, [[I@8c92fc) -PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@11c8145, [J@1c0274c, [F@beabe9, [[I@5dd30) +PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@1195203, [J@a6e171, [F@1444a36, [[I@1a136a6) +PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@a9e3db, [J@19b21d6, [F@fdbe9, [[I@a3cc88) +PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@16b52bc, [J@1884bd6, [F@1081b5d, [[I@14749b8) +PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@a0d5e, [J@1013ef2, [F@5c1a7c, [[I@12b8d86) +PASSED: testIterateOverMDFloatArrayInNaturalBlocks([I@1ef0b40, [J@1395ce1, [F@1f02280, [[I@30db85) PASSED: testIterateOverStringArrayInNaturalBlocks(10, 99) PASSED: testIterateOverStringArrayInNaturalBlocks(10, 100) PASSED: testIterateOverStringArrayInNaturalBlocks(10, 101) @@ -3696,34 +3755,45 @@ PASSED: testWriteOpaqueByteArrayDataSetBlockWise PASSED: testWriteOpaqueByteArrayDataSetBlockWiseMismatch PASSED: testWriteToEmptyFile -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@ba6ff5) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@15f52ed) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@84788f) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@102c18e) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@e0d39c) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1eb3597) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@7279a5) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1ebd114) -PASSED: testBitSetArrayRoundTrip([Ljava.util.BitSet;@1379bc6) -PASSED: testBitSetRoundTrip({}) -PASSED: testBitSetRoundTrip({0}) -PASSED: testBitSetRoundTrip({31}) -PASSED: testBitSetRoundTrip({64}) -PASSED: testBitSetRoundTrip({128}) -PASSED: testBitSetRoundTrip({63, 191}) -PASSED: testBitSetRoundTrip({64, 192}) -PASSED: testBitSetRoundTrip({17, 88, 155}) -PASSED: testBitSetRoundTrip({0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255}) +PASSED: testToInt64 +PASSED: testToInt64_Overflow +PASSED: testToUint16 +PASSED: testToUint32 +PASSED: testToUint8 +PASSED: testConversion +PASSED: testTypeVariant PASSED: testConvertUnit -PASSED: testFileExistsOnFS -PASSED: testOnlyFileAndDirExistsOnFS +PASSED: testAttributeTypeVariantAttributeName +PASSED: testIncrementIdx +PASSED: testCreateVerifyContentArtificialRootRoundtripOK +PASSED: testCreateVerifyRoundtripOK +PASSED: testDescribeLink +PASSED: testFollowAndResolveSymbolicLinks +PASSED: testFollowSymbolicLinks +PASSED: testGetInfo +PASSED: testGetPermissions +PASSED: testIdCache +PASSED: testIntegrityCheck +PASSED: testManyFiles +PASSED: testReadExistingArchive +PASSED: testReadLegacy_14_12_0_Archive +PASSED: testResolveLinks +PASSED: testResolveLinksWithLoops +PASSED: testResolveLinksWithLoopsInPath +PASSED: testRoundtrip +PASSED: testRoundtripArtificalRootOK +PASSED: testRoundtripArtificalRootWhichExistsOnFSOK +PASSED: testWriteByteArrayToArchive +PASSED: testWriteFileAsOutputStream PASSED: testCompressAll PASSED: testCompressBlackList PASSED: testCompressBlackWhiteList PASSED: testCompressDefault PASSED: testCompressDefaultWithCompression PASSED: testCompressWhiteList -PASSED: testIncrementIdx +PASSED: testConcatLink +PASSED: testGetParentPath +PASSED: testNormalizePath PASSED: testCopyIOUtils PASSED: testEmptyDatasetCompact PASSED: testEmptyDatasetContiguous @@ -3753,37 +3823,8 @@ PASSED: testWriteTwiceLargeBuffer PASSED: testWriteTwiceSmallBuffer PASSED: testWriterOpenAfterRAFileClosed -PASSED: testToInt64 -PASSED: testToInt64_Overflow -PASSED: testToUint16 -PASSED: testToUint32 -PASSED: testToUint8 -PASSED: testConversion -PASSED: testTypeVariant -PASSED: testConcatLink -PASSED: testGetParentPath -PASSED: testNormalizePath -PASSED: testAttributeTypeVariantAttributeName -PASSED: testCreateVerifyContentArtificialRootRoundtripOK -PASSED: testCreateVerifyRoundtripOK -PASSED: testDescribeLink -PASSED: testFollowAndResolveSymbolicLinks -PASSED: testFollowSymbolicLinks -PASSED: testGetInfo -PASSED: testGetPermissions -PASSED: testIdCache -PASSED: testIntegrityCheck -PASSED: testManyFiles -PASSED: testReadExistingArchive -PASSED: testReadLegacy_14_12_0_Archive -PASSED: testResolveLinks -PASSED: testResolveLinksWithLoops -PASSED: testResolveLinksWithLoopsInPath -PASSED: testRoundtrip -PASSED: testRoundtripArtificalRootOK -PASSED: testRoundtripArtificalRootWhichExistsOnFSOK -PASSED: testWriteByteArrayToArchive -PASSED: testWriteFileAsOutputStream +PASSED: testFileExistsOnFS +PASSED: testOnlyFileAndDirExistsOnFS =============================================== All @@ -3796,8 +3837,8 @@ Total tests run: 348, Failures: 0, Skips: 0 =============================================== -[TestNG] Time taken by org.testng.reporters.jq.Main@16c48ac: 97 ms -[TestNG] Time taken by org.testng.reporters.EmailableReporter2@1cab519: 17 ms +[TestNG] Time taken by org.testng.reporters.jq.Main@16c48ac: 298 ms +[TestNG] Time taken by org.testng.reporters.EmailableReporter2@1cab519: 40 ms [TestNG] Time taken by [FailedReporter passed=0 failed=0 skipped=0]: 0 ms [Utils] Attempting to create /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/test-output/old/All/toc.html [Utils] Directory /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/test-output/old/All exists: true @@ -3819,33 +3860,33 @@ [Utils] Directory /build/reproducible-path/libsis-jhdf5-java-19.04.1+dfsg/test-output/old/All exists: true [Utils] Attempting to create test-output/old/index.html [Utils] Directory test-output/old exists: true -[TestNG] Time taken by org.testng.reporters.SuiteHTMLReporter@6ba0ac: 54 ms -[TestNG] Time taken by org.testng.reporters.XMLReporter@1686d1f: 34 ms -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.h5ar.UtilsTest.xml -[Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.MatrixUtilsTest.xml -[Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.BitSetConversionTest.xml +[TestNG] Time taken by org.testng.reporters.SuiteHTMLReporter@6ba0ac: 146 ms +[TestNG] Time taken by org.testng.reporters.XMLReporter@1686d1f: 70 ms +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5TimeUnitTest.xml [Utils] Directory test-output/junitreports exists: true [Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5RoundtripTest.xml [Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.io.HDF5DataSetRandomAccessFileTest.xml +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5UtilsTest.xml +[Utils] Directory test-output/junitreports exists: true +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5TimeDurationReaderTest.xml [Utils] Directory test-output/junitreports exists: true [Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.UnsignedIntUtilsTest.xml [Utils] Directory test-output/junitreports exists: true +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.MatrixUtilsTest.xml +[Utils] Directory test-output/junitreports exists: true [Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.h5ar.ArchivingStrategyTest.xml [Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.h5ar.DirectoryIndexUpdaterTest.xml +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.h5ar.UtilsTest.xml [Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5TimeUnitTest.xml +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.h5ar.DirectoryIndexUpdaterTest.xml [Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5UtilsTest.xml +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.BitSetConversionTest.xml [Utils] Directory test-output/junitreports exists: true [Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.h5ar.HDF5ArchiverTest.xml [Utils] Directory test-output/junitreports exists: true -[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.HDF5TimeDurationReaderTest.xml +[Utils] Attempting to create test-output/junitreports/TEST-ch.systemsx.cisd.hdf5.io.HDF5DataSetRandomAccessFileTest.xml [Utils] Directory test-output/junitreports exists: true -[TestNG] Time taken by org.testng.reporters.JUnitReportReporter@149dace: 34 ms +[TestNG] Time taken by org.testng.reporters.JUnitReportReporter@149dace: 84 ms # These other tests have 3 failures. I don't think they are expected to pass. #cd sourceTest/java && \ #ln -s test/hdf5lib/h5ex_g_iterate.hdf . && \ @@ -3892,10 +3933,10 @@ dh_gencontrol dh_md5sums dh_builddeb +dpkg-deb: building package 'libsis-jhdf5-jni-dbgsym' in '../libsis-jhdf5-jni-dbgsym_19.04.1+dfsg-4_i386.deb'. dpkg-deb: building package 'h5ar' in '../h5ar_19.04.1+dfsg-4_all.deb'. dpkg-deb: building package 'libsis-jhdf5-java' in '../libsis-jhdf5-java_19.04.1+dfsg-4_all.deb'. dpkg-deb: building package 'libsis-jhdf5-jni' in '../libsis-jhdf5-jni_19.04.1+dfsg-4_i386.deb'. -dpkg-deb: building package 'libsis-jhdf5-jni-dbgsym' in '../libsis-jhdf5-jni-dbgsym_19.04.1+dfsg-4_i386.deb'. dpkg-genbuildinfo --build=binary -O../libsis-jhdf5-java_19.04.1+dfsg-4_i386.buildinfo dpkg-genchanges --build=binary -O../libsis-jhdf5-java_19.04.1+dfsg-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -3903,12 +3944,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/14223/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/118774 and its subdirectories -I: Current time: Sun Jun 1 08:52:31 -12 2025 -I: pbuilder-time-stamp: 1748811151 +I: removing directory /srv/workspace/pbuilder/14223 and its subdirectories +I: Current time: Tue Apr 30 04:38:28 +14 2024 +I: pbuilder-time-stamp: 1714401508