Diff of the two buildlogs: -- --- b1/build.log 2024-04-30 20:51:06.489482723 +0000 +++ b2/build.log 2024-04-30 20:53:13.568060990 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Jun 2 15:13:37 -12 2025 -I: pbuilder-time-stamp: 1748920417 +I: Current time: Wed May 1 10:51:10 +14 2024 +I: pbuilder-time-stamp: 1714510270 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,54 +26,86 @@ dpkg-source: info: unpacking libbio-searchio-hmmer-perl_1.7.3-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/5869/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 30 20:51 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='32e6538446a64746afde1e6ee74aa8ef' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='5869' - PS1='# ' - PS2='> ' + INVOCATION_ID=903bc69ae54b4712ae4a603ce2ae0334 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=27967 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TOQsHHrp/pbuilderrc_mFuf --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TOQsHHrp/b1 --logfile b1/build.log libbio-searchio-hmmer-perl_1.7.3-2.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TOQsHHrp/pbuilderrc_RtvO --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TOQsHHrp/b2 --logfile b2/build.log libbio-searchio-hmmer-perl_1.7.3-2.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos16-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 27 17:46 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/5869/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 21 07:13 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -86,7 +118,7 @@ Depends: debhelper-compat (= 12), libbio-perl-perl, libio-string-perl, perl, libtest-most-perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. -(Reading database ... 19709 files and directories currently installed.) +(Reading database ... 19885 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: @@ -160,10 +192,10 @@ Get: 43 http://deb.debian.org/debian trixie/main i386 libtest-exception-perl all 0.43-3 [16.9 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libtest-warn-perl all 0.37-2 [14.5 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libtest-most-perl all 0.38-1 [25.1 kB] -Fetched 22.7 MB in 0s (80.2 MB/s) +Fetched 22.7 MB in 1s (38.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. -(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19709 files and directories currently installed.) +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19885 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. @@ -360,7 +392,11 @@ fakeroot is already the newest version (1.33-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-searchio-hmmer-perl_1.7.3-2_source.changes +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-searchio-hmmer-perl_1.7.3-2_source.changes dpkg-buildpackage: info: source package libbio-searchio-hmmer-perl dpkg-buildpackage: info: source version 1.7.3-2 dpkg-buildpackage: info: source distribution unstable @@ -382,25 +418,25 @@ Writing Makefile for Bio::SearchIO::hmmer Writing MYMETA.yml and MYMETA.json dh_auto_build - make -j22 + make -j10 make[1]: Entering directory '/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3' +cp lib/Bio/Search/Hit/HmmpfamHit.pm blib/lib/Bio/Search/Hit/HmmpfamHit.pm +cp lib/Bio/Tools/Hmmpfam.pm blib/lib/Bio/Tools/Hmmpfam.pm +cp lib/Bio/Search/Hit/HMMERHit.pm blib/lib/Bio/Search/Hit/HMMERHit.pm +cp lib/Bio/Tools/HMMER/Domain.pm blib/lib/Bio/Tools/HMMER/Domain.pm cp lib/Bio/Search/HSP/HmmpfamHSP.pm blib/lib/Bio/Search/HSP/HmmpfamHSP.pm -cp lib/Bio/Tools/HMMER/Set.pm blib/lib/Bio/Tools/HMMER/Set.pm -cp lib/Bio/SearchIO/hmmer_pull.pm blib/lib/Bio/SearchIO/hmmer_pull.pm -cp lib/Bio/SearchIO/hmmer2.pm blib/lib/Bio/SearchIO/hmmer2.pm -cp lib/Bio/SearchIO/hmmer.pm blib/lib/Bio/SearchIO/hmmer.pm +cp lib/Bio/Index/Hmmer.pm blib/lib/Bio/Index/Hmmer.pm cp lib/Bio/Search/HSP/HMMERHSP.pm blib/lib/Bio/Search/HSP/HMMERHSP.pm -cp lib/Bio/Search/Result/HMMERResult.pm blib/lib/Bio/Search/Result/HMMERResult.pm -cp lib/Bio/Search/Hit/hmmer3Hit.pm blib/lib/Bio/Search/Hit/hmmer3Hit.pm +cp lib/Bio/Tools/HMMER/Set.pm blib/lib/Bio/Tools/HMMER/Set.pm cp lib/Bio/SearchIO/hmmer3.pm blib/lib/Bio/SearchIO/hmmer3.pm -cp lib/Bio/Tools/HMMER/Domain.pm blib/lib/Bio/Tools/HMMER/Domain.pm -cp lib/Bio/Search/Hit/HmmpfamHit.pm blib/lib/Bio/Search/Hit/HmmpfamHit.pm cp lib/Bio/Search/Result/hmmer3Result.pm blib/lib/Bio/Search/Result/hmmer3Result.pm cp lib/Bio/Search/Result/HmmpfamResult.pm blib/lib/Bio/Search/Result/HmmpfamResult.pm -cp lib/Bio/Search/Hit/HMMERHit.pm blib/lib/Bio/Search/Hit/HMMERHit.pm -cp lib/Bio/Index/Hmmer.pm blib/lib/Bio/Index/Hmmer.pm +cp lib/Bio/SearchIO/hmmer.pm blib/lib/Bio/SearchIO/hmmer.pm +cp lib/Bio/Search/Hit/hmmer3Hit.pm blib/lib/Bio/Search/Hit/hmmer3Hit.pm cp lib/Bio/Tools/HMMER/Results.pm blib/lib/Bio/Tools/HMMER/Results.pm -cp lib/Bio/Tools/Hmmpfam.pm blib/lib/Bio/Tools/Hmmpfam.pm +cp lib/Bio/Search/Result/HMMERResult.pm blib/lib/Bio/Search/Result/HMMERResult.pm +cp lib/Bio/SearchIO/hmmer_pull.pm blib/lib/Bio/SearchIO/hmmer_pull.pm +cp lib/Bio/SearchIO/hmmer2.pm blib/lib/Bio/SearchIO/hmmer2.pm cp bin/bp_hmmer_to_table.pl blib/script/bp_hmmer_to_table.pl cp bin/bp_parse_hmmsearch.pl blib/script/bp_parse_hmmsearch.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_hmmer_to_table.pl @@ -409,7 +445,7 @@ Manifying 17 pod documents make[1]: Leaving directory '/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3' dh_auto_test - make -j22 test TEST_VERBOSE=1 + make -j10 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... @@ -1596,7 +1632,7 @@ ok 29 ok All tests successful. -Files=7, Tests=1166, 4 wallclock secs ( 0.12 usr 0.02 sys + 3.76 cusr 0.18 csys = 4.08 CPU) +Files=7, Tests=1166, 24 wallclock secs ( 0.16 usr 0.04 sys + 8.34 cusr 1.40 csys = 9.94 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3' create-stamp debian/debhelper-build-stamp @@ -1605,48 +1641,48 @@ dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-searchio-hmmer-perl/ - make -j22 install DESTDIR=/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr + make -j10 install DESTDIR=/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3' Manifying 2 pod documents Manifying 17 pod documents -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/Hmmpfam.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/HMMER/Set.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/HMMER/Results.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/HMMER/Domain.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Index/Hmmer.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer2.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer_pull.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer3.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/HSP/HmmpfamHSP.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/HSP/HMMERHSP.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/Result/HMMERResult.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/Result/HmmpfamResult.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/Result/hmmer3Result.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/Hit/HMMERHit.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/Hit/HmmpfamHit.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/Hit/hmmer3Hit.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/HSP/HmmpfamHSP.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Search/HSP/HMMERHSP.pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man1/bp_parse_hmmsearch.pl.1p +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Index/Hmmer.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer_pull.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer3.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/SearchIO/hmmer2.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/Hmmpfam.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/HMMER/Domain.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/HMMER/Set.pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/perl5/Bio/Tools/HMMER/Results.pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man1/bp_hmmer_to_table.pl.1p -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::HMMER::Domain.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::SearchIO::hmmer3.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::Hmmpfam.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Result::HmmpfamResult.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man1/bp_parse_hmmsearch.pl.1p +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::SearchIO::hmmer_pull.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::HMMER::Results.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Index::Hmmer.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::HSP::HMMERHSP.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Hit::hmmer3Hit.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::Hmmpfam.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::SearchIO::hmmer2.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Hit::HmmpfamHit.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Index::Hmmer.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Result::hmmer3Result.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Result::HmmpfamResult.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::HMMER::Set.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Result::HMMERResult.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Hit::HMMERHit.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::SearchIO::hmmer_pull.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::HSP::HMMERHSP.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::SearchIO::hmmer.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::HMMER::Domain.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Hit::hmmer3Hit.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Hit::HmmpfamHit.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::HSP::HmmpfamHSP.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Tools::HMMER::Set.3pm -Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/bin/bp_parse_hmmsearch.pl +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::Search::Hit::HMMERHit.3pm +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/share/man/man3/Bio::SearchIO::hmmer3.3pm Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/bin/bp_hmmer_to_table.pl +Installing /build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3/debian/libbio-searchio-hmmer-perl/usr/bin/bp_parse_hmmsearch.pl make[1]: Leaving directory '/build/reproducible-path/libbio-searchio-hmmer-perl-1.7.3' dh_installdocs dh_installchangelogs @@ -1670,12 +1706,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/27967/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/5869 and its subdirectories -I: Current time: Mon Jun 2 15:14:05 -12 2025 -I: pbuilder-time-stamp: 1748920445 +I: removing directory /srv/workspace/pbuilder/27967 and its subdirectories +I: Current time: Wed May 1 10:53:12 +14 2024 +I: pbuilder-time-stamp: 1714510392