Diff of the two buildlogs: -- --- b1/build.log 2024-04-09 10:03:17.909690488 +0000 +++ b2/build.log 2024-04-09 10:07:05.211953909 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon May 12 04:25:07 -12 2025 -I: pbuilder-time-stamp: 1747067107 +I: Current time: Wed Apr 10 00:03:20 +14 2024 +I: pbuilder-time-stamp: 1712657000 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -36,54 +36,86 @@ dpkg-source: info: applying skip_tests_touching_security_sensitive_fields.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/116095/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 9 10:03 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=7 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='87aec3a2390844bb887453ff1f5aa68b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='116095' - PS1='# ' - PS2='> ' + INVOCATION_ID=0a687c4d478f4b6cb511a1358a1569a2 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15310 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IUhFeKjU/pbuilderrc_SyrG --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IUhFeKjU/b1 --logfile b1/build.log capsule-nextflow_1.1.1+dfsg-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IUhFeKjU/pbuilderrc_i6Hr --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IUhFeKjU/b2 --logfile b2/build.log capsule-nextflow_1.1.1+dfsg-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos6-i386 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 11 17:46 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/116095/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 7 11:25 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -314,7 +346,7 @@ Get: 179 http://deb.debian.org/debian trixie/main i386 libjacoco-java all 0.8.11-1 [643 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libjimfs-java all 1.1-6 [191 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libtruth-java all 0.39-1 [164 kB] -Fetched 228 MB in 3s (83.1 MB/s) +Fetched 228 MB in 7s (32.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19875 files and directories currently installed.) @@ -1248,7 +1280,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../capsule-nextflow_1.1.1+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../capsule-nextflow_1.1.1+dfsg-1_source.changes dpkg-buildpackage: info: source package capsule-nextflow dpkg-buildpackage: info: source version 1.1.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -1271,7 +1307,7 @@ dh_auto_build -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ - gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=22 jar + gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=7 jar openjdk version "17.0.10" 2024-01-16 OpenJDK Runtime Environment (build 17.0.10+7-Debian-1) OpenJDK Server VM (build 17.0.10+7-Debian-1, mixed mode, sharing) @@ -1279,18 +1315,18 @@ To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' -An attempt to start the daemon took 0.764 secs. -The client will now receive all logging from the daemon (pid: 127762). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-127762.out.log +An attempt to start the daemon took 2.887 secs. +The client will now receive all logging from the daemon (pid: 34502). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-34502.out.log Daemon will be stopped at the end of the build stopping after processing Closing daemon's stdin at end of input. The daemon will no longer process any standard input. -Using 22 worker leases. -Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1aeefd0 -Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1aeefd0 -Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1303eb +Using 7 worker leases. +Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@8826b8 +Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@8826b8 +Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@10b2215 Starting Build Compiling initialization script '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. -Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@1ec3ccb +Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@1a2907 Compiling initialization script '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. Compiling settings file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/settings.gradle' using SubsetScriptTransformer. Compiling settings file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/settings.gradle' using BuildScriptTransformer. @@ -1313,24 +1349,24 @@ Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'jar' from project : -Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@14a56d2 +Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@b610fa Tasks to be executed: [task ':capsule:compileJava', task ':capsule:processResources', task ':capsule:classes', task ':capsule:debianMavenPom', task ':capsule:jar', task ':capsule-util:compileJava', task ':capsule-util:processResources', task ':capsule-util:classes', task ':capsule-util:debianMavenPom', task ':capsule-util:jar'] -Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1303eb -Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@1c5ccdb -Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@1409e96 -:capsule:compileJava (Thread[Task worker for ':' Thread 2,5,main]) started. -:capsule-util:compileJava (Thread[Task worker for ':' Thread 17,5,main]) started. +Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@10b2215 +Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@cd72d2 +Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@d9ad88 +:capsule:compileJava (Thread[Task worker for ':',5,main]) started. :capsule:compileJava +Putting task artifact state for task ':capsule:compileJava' into context took 0.006 secs. +:capsule-util:compileJava (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:compileJava -Putting task artifact state for task ':capsule:compileJava' into context took 0.003 secs. -Putting task artifact state for task ':capsule-util:compileJava' into context took 0.003 secs. -Up-to-date check for task ':capsule:compileJava' took 0.017 secs. It is not up-to-date because: +Putting task artifact state for task ':capsule-util:compileJava' into context took 0.0 secs. +Up-to-date check for task ':capsule:compileJava' took 0.066 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':capsule:compileJava'. Use of target 1.7 is no longer supported, switching to 8 Use of source 1.7 is no longer supported, switching to 8 Compiling with JDK Java compiler API. -Up-to-date check for task ':capsule-util:compileJava' took 0.053 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:compileJava' took 0.483 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':capsule-util:compileJava'. Use of target 1.7 is no longer supported, switching to 8 @@ -1346,65 +1382,65 @@ Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. -:capsule-util:compileJava (Thread[Task worker for ':' Thread 17,5,main]) completed. Took 1.839 secs. -:capsule-util:processResources (Thread[Task worker for ':' Thread 17,5,main]) started. +:capsule-util:compileJava (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 10.82 secs. +:capsule-util:processResources (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:processResources Putting task artifact state for task ':capsule-util:processResources' into context took 0.0 secs. -Up-to-date check for task ':capsule-util:processResources' took 0.002 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:processResources' took 0.008 secs. It is not up-to-date because: No history is available. -:capsule-util:processResources (Thread[Task worker for ':' Thread 17,5,main]) completed. Took 0.018 secs. -:capsule-util:classes (Thread[Task worker for ':' Thread 17,5,main]) started. +:capsule-util:processResources (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.041 secs. +:capsule-util:classes (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:classes Skipping task ':capsule-util:classes' as it has no actions. -:capsule-util:classes (Thread[Task worker for ':' Thread 17,5,main]) completed. Took 0.0 secs. -:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 17,5,main]) started. +:capsule-util:classes (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.001 secs. +:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:debianMavenPom Putting task artifact state for task ':capsule-util:debianMavenPom' into context took 0.0 secs. -Up-to-date check for task ':capsule-util:debianMavenPom' took 0.0 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:debianMavenPom' took 0.001 secs. It is not up-to-date because: No history is available. Generating pom file /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/debian/capsule-util.pom -:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 17,5,main]) completed. Took 0.079 secs. -:capsule-util:jar (Thread[Task worker for ':' Thread 17,5,main]) started. +:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.357 secs. +:capsule-util:jar (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:jar Putting task artifact state for task ':capsule-util:jar' into context took 0.0 secs. -Up-to-date check for task ':capsule-util:jar' took 0.006 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:jar' took 0.04 secs. It is not up-to-date because: No history is available. Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/java/Capsule.java uses unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. 2 warnings -:capsule:compileJava (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 1.964 secs. -:capsule:processResources (Thread[Task worker for ':' Thread 2,5,main]) started. +:capsule:compileJava (Thread[Task worker for ':',5,main]) completed. Took 11.509 secs. +:capsule:processResources (Thread[Task worker for ':',5,main]) started. :capsule:processResources Putting task artifact state for task ':capsule:processResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/resources', not found Skipping task ':capsule:processResources' as it has no source files and no previous output files. :capsule:processResources NO-SOURCE -:capsule:processResources (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.001 secs. -:capsule:classes (Thread[Task worker for ':' Thread 2,5,main]) started. +:capsule:processResources (Thread[Task worker for ':',5,main]) completed. Took 0.015 secs. +:capsule:classes (Thread[Task worker for ':',5,main]) started. :capsule:classes Skipping task ':capsule:classes' as it has no actions. -:capsule:classes (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. -:capsule:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) started. +:capsule:classes (Thread[Task worker for ':',5,main]) completed. Took 0.0 secs. +:capsule:debianMavenPom (Thread[Task worker for ':',5,main]) started. :capsule:debianMavenPom Putting task artifact state for task ':capsule:debianMavenPom' into context took 0.0 secs. -Up-to-date check for task ':capsule:debianMavenPom' took 0.001 secs. It is not up-to-date because: +Up-to-date check for task ':capsule:debianMavenPom' took 0.002 secs. It is not up-to-date because: No history is available. Generating pom file /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/debian/capsule.pom -:capsule:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.006 secs. -:capsule:jar (Thread[Task worker for ':' Thread 2,5,main]) started. +:capsule:debianMavenPom (Thread[Task worker for ':',5,main]) completed. Took 0.026 secs. +:capsule:jar (Thread[Task worker for ':',5,main]) started. :capsule:jar Putting task artifact state for task ':capsule:jar' into context took 0.0 secs. -Up-to-date check for task ':capsule:jar' took 0.002 secs. It is not up-to-date because: +Up-to-date check for task ':capsule:jar' took 0.009 secs. It is not up-to-date because: No history is available. -:capsule:jar (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.021 secs. -:capsule-util:jar (Thread[Task worker for ':' Thread 17,5,main]) completed. Took 0.055 secs. +:capsule:jar (Thread[Task worker for ':',5,main]) completed. Took 0.052 secs. +:capsule-util:jar (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.381 secs. -BUILD SUCCESSFUL in 6s +BUILD SUCCESSFUL in 29s 7 actionable tasks: 7 executed dh_auto_test -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ - gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=22 test + gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=7 test openjdk version "17.0.10" 2024-01-16 OpenJDK Runtime Environment (build 17.0.10+7-Debian-1) OpenJDK Server VM (build 17.0.10+7-Debian-1, mixed mode, sharing) @@ -1412,17 +1448,17 @@ To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' -An attempt to start the daemon took 0.742 secs. -The client will now receive all logging from the daemon (pid: 128154). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-128154.out.log +An attempt to start the daemon took 2.962 secs. +The client will now receive all logging from the daemon (pid: 37202). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-37202.out.log Daemon will be stopped at the end of the build stopping after processing Closing daemon's stdin at end of input. The daemon will no longer process any standard input. -Using 22 worker leases. -Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1c30502 -Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1c30502 -Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1e4aeda +Using 7 worker leases. +Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1681d4a +Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1681d4a +Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@13cfab0 Starting Build -Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@149f7c8 +Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@177e795 Settings evaluated using settings file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/settings.gradle'. Projects loaded. Root project using build file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/build.gradle'. Included projects: [root project 'capsule', project ':capsule', project ':capsule-util'] @@ -1440,84 +1476,85 @@ Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'test' from project : -Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@9575ae +Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@69ba3c Tasks to be executed: [task ':capsule:compileJava', task ':capsule:processResources', task ':capsule:classes', task ':capsule:debianMavenPom', task ':capsule:jar', task ':capsule-util:compileJava', task ':capsule-util:processResources', task ':capsule-util:classes', task ':capsule-util:debianMavenPom', task ':capsule-util:jar', task ':capsule:compileTestJava', task ':capsule:processTestResources', task ':capsule:testClasses', task ':capsule:test', task ':capsule-util:compileTestJava', task ':capsule-util:processTestResources', task ':capsule-util:testClasses', task ':capsule-util:test'] -Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1e4aeda -Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@125958a -Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@109f45c -:capsule:compileJava (Thread[Task worker for ':' Thread 5,5,main]) started. -:capsule-util:compileJava (Thread[Task worker for ':' Thread 18,5,main]) started. +Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@13cfab0 +Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@d0d223 +Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@466caf +:capsule:compileJava (Thread[Task worker for ':',5,main]) started. :capsule:compileJava +:capsule-util:compileJava (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:compileJava -Putting task artifact state for task ':capsule-util:compileJava' into context took 0.004 secs. -Putting task artifact state for task ':capsule:compileJava' into context took 0.004 secs. -Skipping task ':capsule:compileJava' as it is up-to-date (took 0.025 secs). +Putting task artifact state for task ':capsule-util:compileJava' into context took 0.0 secs. +Putting task artifact state for task ':capsule:compileJava' into context took 0.017 secs. +Skipping task ':capsule:compileJava' as it is up-to-date (took 0.101 secs). :capsule:compileJava UP-TO-DATE -:capsule:compileJava (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.054 secs. -:capsule:processResources (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule:compileJava (Thread[Task worker for ':',5,main]) completed. Took 0.207 secs. +:capsule:processResources (Thread[Task worker for ':',5,main]) started. :capsule:processResources Putting task artifact state for task ':capsule:processResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/resources', not found Skipping task ':capsule:processResources' as it has no source files and no previous output files. :capsule:processResources NO-SOURCE -:capsule:processResources (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.003 secs. -:capsule:classes (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule:processResources (Thread[Task worker for ':',5,main]) completed. Took 0.035 secs. +:capsule:classes (Thread[Task worker for ':',5,main]) started. :capsule:classes Skipping task ':capsule:classes' as it has no actions. :capsule:classes UP-TO-DATE -:capsule:classes (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.0 secs. -:capsule:debianMavenPom (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule:classes (Thread[Task worker for ':',5,main]) completed. Took 0.001 secs. +:capsule:debianMavenPom (Thread[Task worker for ':',5,main]) started. :capsule:debianMavenPom Putting task artifact state for task ':capsule:debianMavenPom' into context took 0.0 secs. -Skipping task ':capsule:debianMavenPom' as it is up-to-date (took 0.001 secs). +Skipping task ':capsule:debianMavenPom' as it is up-to-date (took 0.01 secs). :capsule:debianMavenPom UP-TO-DATE -:capsule:debianMavenPom (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.003 secs. -:capsule:jar (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule:debianMavenPom (Thread[Task worker for ':',5,main]) completed. Took 0.013 secs. +:capsule:jar (Thread[Task worker for ':',5,main]) started. :capsule:jar Putting task artifact state for task ':capsule:jar' into context took 0.0 secs. -Skipping task ':capsule:jar' as it is up-to-date (took 0.003 secs). +Skipping task ':capsule-util:compileJava' as it is up-to-date (took 0.206 secs). +:capsule-util:compileJava UP-TO-DATE +:capsule-util:compileJava (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.293 secs. +:capsule-util:processResources (Thread[Task worker for ':' Thread 2,5,main]) started. +:capsule-util:processResources +Putting task artifact state for task ':capsule-util:processResources' into context took 0.0 secs. +Skipping task ':capsule:jar' as it is up-to-date (took 0.028 secs). :capsule:jar UP-TO-DATE -:capsule:jar (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.006 secs. -:capsule:processTestResources (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule:jar (Thread[Task worker for ':',5,main]) completed. Took 0.039 secs. +:capsule:processTestResources (Thread[Task worker for ':',5,main]) started. :capsule:processTestResources Putting task artifact state for task ':capsule:processTestResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/test/resources', not found Skipping task ':capsule:processTestResources' as it has no source files and no previous output files. :capsule:processTestResources NO-SOURCE -:capsule:processTestResources (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.001 secs. -Skipping task ':capsule-util:compileJava' as it is up-to-date (took 0.065 secs). -:capsule-util:compileJava UP-TO-DATE -:capsule-util:compileJava (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 0.092 secs. -:capsule-util:processResources (Thread[Task worker for ':' Thread 18,5,main]) started. -:capsule-util:processResources -Putting task artifact state for task ':capsule-util:processResources' into context took 0.0 secs. -Skipping task ':capsule-util:processResources' as it is up-to-date (took 0.003 secs). +:capsule:processTestResources (Thread[Task worker for ':',5,main]) completed. Took 0.004 secs. +Skipping task ':capsule-util:processResources' as it is up-to-date (took 0.021 secs). :capsule-util:processResources UP-TO-DATE -:capsule-util:processResources (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 0.005 secs. -:capsule-util:classes (Thread[Task worker for ':' Thread 18,5,main]) started. +:capsule-util:processResources (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.032 secs. +:capsule-util:classes (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:classes Skipping task ':capsule-util:classes' as it has no actions. :capsule-util:classes UP-TO-DATE -:capsule-util:classes (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 0.0 secs. -:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 18,5,main]) started. +:capsule-util:classes (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. +:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:debianMavenPom Putting task artifact state for task ':capsule-util:debianMavenPom' into context took 0.0 secs. -Skipping task ':capsule-util:debianMavenPom' as it is up-to-date (took 0.001 secs). +Skipping task ':capsule-util:debianMavenPom' as it is up-to-date (took 0.006 secs). :capsule-util:debianMavenPom UP-TO-DATE -:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 0.002 secs. -:capsule-util:jar (Thread[Task worker for ':' Thread 18,5,main]) started. +:capsule-util:debianMavenPom (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.018 secs. +:capsule-util:jar (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule-util:jar Putting task artifact state for task ':capsule-util:jar' into context took 0.0 secs. -Skipping task ':capsule-util:jar' as it is up-to-date (took 0.003 secs). +Skipping task ':capsule-util:jar' as it is up-to-date (took 0.015 secs). :capsule-util:jar UP-TO-DATE -:capsule-util:jar (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 0.005 secs. -:capsule:compileTestJava (Thread[Task worker for ':' Thread 18,5,main]) started. +:capsule-util:jar (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.026 secs. +:capsule:compileTestJava (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule:compileTestJava Putting task artifact state for task ':capsule:compileTestJava' into context took 0.0 secs. -:capsule-util:compileTestJava (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule-util:compileTestJava (Thread[Task worker for ':',5,main]) started. :capsule-util:compileTestJava Putting task artifact state for task ':capsule-util:compileTestJava' into context took 0.0 secs. -Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@7df27f +Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@6f59a5 + Loading the Maven rules... Loading the Maven rules... Replacing junit:junit:jar:4.12 -> junit:junit:jar:4.x Replacing junit:junit:jar:4.12 -> junit:junit:jar:4.x @@ -1543,63 +1580,58 @@ Passing through com.google.errorprone:error_prone_annotations:jar:debian Passing through com.google.errorprone:error_prone_parent:jar:debian Passing through com.google.errorprone:error_prone_parent:jar:debian -Up-to-date check for task ':capsule-util:compileTestJava' took 1.134 secs. It is not up-to-date because: - No history is available. -Up-to-date check for task ':capsule:compileTestJava' took 1.139 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:compileTestJava' took 3.556 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':capsule-util:compileTestJava'. -All input files are considered out-of-date for incremental task ':capsule:compileTestJava'. Use of target 1.7 is no longer supported, switching to 8 -Use of target 1.7 is no longer supported, switching to 8 -Use of source 1.7 is no longer supported, switching to 8 Use of source 1.7 is no longer supported, switching to 8 Compiling with JDK Java compiler API. +Up-to-date check for task ':capsule:compileTestJava' took 3.654 secs. It is not up-to-date because: + No history is available. +All input files are considered out-of-date for incremental task ':capsule:compileTestJava'. +Use of target 1.7 is no longer supported, switching to 8 +Use of source 1.7 is no longer supported, switching to 8 Compiling with JDK Java compiler API. -:capsule-util:compileTestJava (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 2.27 secs. -:capsule-util:processTestResources (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule-util:compileTestJava (Thread[Task worker for ':',5,main]) completed. Took 7.397 secs. +:capsule-util:processTestResources (Thread[Task worker for ':',5,main]) started. :capsule-util:processTestResources Putting task artifact state for task ':capsule-util:processTestResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/src/test/resources', not found Skipping task ':capsule-util:processTestResources' as it has no source files and no previous output files. :capsule-util:processTestResources NO-SOURCE -:capsule-util:processTestResources (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.001 secs. -:capsule-util:testClasses (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule-util:processTestResources (Thread[Task worker for ':',5,main]) completed. Took 0.006 secs. +:capsule-util:testClasses (Thread[Task worker for ':',5,main]) started. :capsule-util:testClasses Skipping task ':capsule-util:testClasses' as it has no actions. -:capsule-util:testClasses (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 0.0 secs. -:capsule-util:test (Thread[Task worker for ':' Thread 5,5,main]) started. +:capsule-util:testClasses (Thread[Task worker for ':',5,main]) completed. Took 0.0 secs. +:capsule-util:test (Thread[Task worker for ':',5,main]) started. :capsule-util:test Putting task artifact state for task ':capsule-util:test' into context took 0.0 secs. Replacing org.jacoco:org.jacoco.agent:jar:0.7.9 -> org.jacoco:org.jacoco.agent:jar:debian Passing through org.jacoco:org.jacoco.build:jar:debian -Up-to-date check for task ':capsule-util:test' took 0.182 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:test' took 0.485 secs. It is not up-to-date because: No history is available. +Starting process 'Gradle Test Executor 1'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_34b6726e22d9e6bf60a1fc5af9ddf8d7/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath17126992099962539751txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1' +Successfully started process 'Gradle Test Executor 1' Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/test/java/TestCapsule.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/test/java/MyCapsule.java uses unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. -:capsule:compileTestJava (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 2.581 secs. -:capsule:testClasses (Thread[Task worker for ':' Thread 18,5,main]) started. +:capsule:compileTestJava (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 9.46 secs. +:capsule:testClasses (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule:testClasses Skipping task ':capsule:testClasses' as it has no actions. -:capsule:testClasses (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 0.0 secs. -:capsule:test (Thread[Task worker for ':' Thread 18,5,main]) started. +:capsule:testClasses (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. +:capsule:test (Thread[Task worker for ':' Thread 2,5,main]) started. :capsule:test Putting task artifact state for task ':capsule:test' into context took 0.0 secs. -Up-to-date check for task ':capsule:test' took 0.011 secs. It is not up-to-date because: +Up-to-date check for task ':capsule:test' took 0.069 secs. It is not up-to-date because: No history is available. -Starting process 'Gradle Test Executor 2'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_34b6726e22d9e6bf60a1fc5af9ddf8d7/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath12997930889911963734txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 2' -Starting process 'Gradle Test Executor 1'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_34b6726e22d9e6bf60a1fc5af9ddf8d7/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath4604276235799918700txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1' +Starting process 'Gradle Test Executor 2'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule Command: /usr/lib/jvm/java-17-openjdk-i386/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_34b6726e22d9e6bf60a1fc5af9ddf8d7/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath9734866125290186880txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 2' Successfully started process 'Gradle Test Executor 2' -Successfully started process 'Gradle Test Executor 1' Gradle Test Executor 1 started executing tests. -Gradle Test Executor 2 started executing tests. Running test: Test testSimpleExtract(co.paralleluniverse.capsule.CapsuleLauncherTest) -Running test: Test testWrapperCapsuleAgent(CapsuleAgentTest) - -CapsuleAgentTest > testWrapperCapsuleAgent SKIPPED -Running test: Test testExtendClasspath(NextflowLoaderTest) -Running test: Test testExtendDeps(NextflowLoaderTest) +Gradle Test Executor 2 started executing tests. Running test: Test testEmbeddedCaplet(CapsuleTest) CapsuleTest > testEmbeddedCaplet SKIPPED @@ -1628,16 +1660,11 @@ CapsuleTest > testMode2 SKIPPED Running test: Test testMode(CapsuleTest) -Gradle Test Executor 2 finished executing tests. CapsuleTest > testMode SKIPPED Running test: Test testMove(CapsuleTest) -WARNING: A terminally deprecated method in java.lang.System has been called -WARNING: System::setSecurityManager has been called by -org.gradle.api.internal.tasks.testing.worker.TestWorker (file:/usr/share/gradle/lib/plugins/gradle-testing-base-4.4.1.jar) + CapsuleTest > testMove SKIPPED -WARNING: Please consider reporting this to the maintainers of org.gradle.api.internal.tasks.testing.worker.TestWorker -WARNING: System::setSecurityManager will be removed in a future release Running test: Test testEmbeddedArtifact(CapsuleTest) CapsuleTest > testEmbeddedArtifact SKIPPED @@ -1731,10 +1758,16 @@ Running test: Test testApplicationArtifact(CapsuleTest) CapsuleTest > testApplicationArtifact SKIPPED -Finished generating test XML results (0.01 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/test-results/test -Generating HTML test report... -Finished generating test html results (0.023 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/reports/tests/test -:capsule:test (Thread[Task worker for ':' Thread 18,5,main]) completed. Took 1.282 secs. +Running test: Test testExtendClasspath(NextflowLoaderTest) +Running test: Test testExtendDeps(NextflowLoaderTest) +Running test: Test testWrapperCapsuleAgent(CapsuleAgentTest) + +CapsuleAgentTest > testWrapperCapsuleAgent SKIPPED +Gradle Test Executor 2 finished executing tests. +WARNING: A terminally deprecated method in java.lang.System has been called +WARNING: System::setSecurityManager has been called by org.gradle.api.internal.tasks.testing.worker.TestWorker (file:/usr/share/gradle/lib/plugins/gradle-testing-base-4.4.1.jar) +WARNING: Please consider reporting this to the maintainers of org.gradle.api.internal.tasks.testing.worker.TestWorker +WARNING: System::setSecurityManager will be removed in a future release Running test: Test testEnableJMX(co.paralleluniverse.capsule.CapsuleLauncherTest) Running test: Test testAddZip1(co.paralleluniverse.capsule.JarTest) Running test: Test testAddZip2(co.paralleluniverse.capsule.JarTest) @@ -1745,23 +1778,27 @@ Running test: Test testUpdateJar3(co.paralleluniverse.capsule.JarTest) Running test: Test testReallyExecutableJar(co.paralleluniverse.capsule.JarTest) Running test: Test testAddPackage2(co.paralleluniverse.capsule.JarTest) +Finished generating test XML results (0.055 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/test-results/test +Generating HTML test report... Running test: Test testAddPackage(co.paralleluniverse.capsule.JarTest) Running test: Test testFilePrefix(co.paralleluniverse.capsule.JarTest) Running test: Test testStringPrefix(co.paralleluniverse.capsule.JarTest) Running test: Test testCreateJar(co.paralleluniverse.capsule.JarTest) Running test: Test testAddDirectory1(co.paralleluniverse.capsule.JarTest) Running test: Test testAddDirectory2(co.paralleluniverse.capsule.JarTest) -Gradle Test Executor 1 finished executing tests. +Finished generating test html results (0.08 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/reports/tests/test WARNING: A terminally deprecated method in java.lang.System has been called WARNING: System::setSecurityManager has been called by org.gradle.api.internal.tasks.testing.worker.TestWorker (file:/usr/share/gradle/lib/plugins/gradle-testing-base-4.4.1.jar) WARNING: Please consider reporting this to the maintainers of org.gradle.api.internal.tasks.testing.worker.TestWorker WARNING: System::setSecurityManager will be removed in a future release -Finished generating test XML results (0.001 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/test-results/test +Gradle Test Executor 1 finished executing tests. +:capsule:test (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 4.871 secs. +Finished generating test XML results (0.002 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/test-results/test Generating HTML test report... -Finished generating test html results (0.004 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/reports/tests/test -:capsule-util:test (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 1.963 secs. +Finished generating test html results (0.017 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/reports/tests/test +:capsule-util:test (Thread[Task worker for ':',5,main]) completed. Took 7.138 secs. -BUILD SUCCESSFUL in 8s +BUILD SUCCESSFUL in 30s 11 actionable tasks: 4 executed, 7 up-to-date create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=gradle @@ -1793,12 +1830,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15310/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/116095 and its subdirectories -I: Current time: Mon May 12 04:26:14 -12 2025 -I: pbuilder-time-stamp: 1747067174 +I: removing directory /srv/workspace/pbuilder/15310 and its subdirectories +I: Current time: Wed Apr 10 00:07:04 +14 2024 +I: pbuilder-time-stamp: 1712657224