Diff of the two buildlogs: -- --- b1/build.log 2025-01-02 08:03:09.334477231 +0000 +++ b2/build.log 2025-01-02 08:09:18.521681959 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jan 1 20:00:40 -12 2025 -I: pbuilder-time-stamp: 1735804840 +I: Current time: Thu Feb 5 04:26:50 +14 2026 +I: pbuilder-time-stamp: 1770215210 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -28,54 +28,86 @@ dpkg-source: info: applying omit_flags_in_binary.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/45874/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/D01_modify_environment starting +debug: Running on ionos6-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 4 14:28 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='09ddbf4db3984adfbc5923406f82a807' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='45874' - PS1='# ' - PS2='> ' + INVOCATION_ID=daa284e6d7da4251b4eaa342d50d2b7f + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=118491 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.bE3WNc6U/pbuilderrc_NhFS --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.bE3WNc6U/b1 --logfile b1/build.log atomes_1.1.16-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.bE3WNc6U/pbuilderrc_LHyb --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.bE3WNc6U/b2 --logfile b2/build.log atomes_1.1.16-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos2-i386 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/45874/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -532,7 +564,7 @@ Get: 387 http://deb.debian.org/debian trixie/main i386 libswscale8 i386 7:7.1-3+b1 [218 kB] Get: 388 http://deb.debian.org/debian trixie/main i386 libswscale-dev i386 7:7.1-3+b1 [245 kB] Get: 389 http://deb.debian.org/debian trixie/main i386 libxml2-dev i386 2.12.7+dfsg+really2.9.14-0.2+b1 [857 kB] -Fetched 204 MB in 3s (59.6 MB/s) +Fetched 204 MB in 6s (34.9 MB/s) Preconfiguring packages ... Selecting previously unselected package libapparmor1:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19951 files and directories currently installed.) @@ -1809,8 +1841,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Jan 2 08:01:46 UTC 2025. -Universal Time is now: Thu Jan 2 08:01:46 UTC 2025. +Local time is now: Wed Feb 4 14:29:08 UTC 2026. +Universal Time is now: Wed Feb 4 14:29:08 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:i386 (1.17.0-2+b1) ... @@ -2140,7 +2172,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/atomes-1.1.16/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../atomes_1.1.16-1_source.changes +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/atomes-1.1.16/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../atomes_1.1.16-1_source.changes dpkg-buildpackage: info: source package atomes dpkg-buildpackage: info: source version 1.1.16-1 dpkg-buildpackage: info: source distribution unstable @@ -2222,7 +2258,7 @@ config.status: creating config.h config.status: executing depfiles commands dh_auto_build - make -j11 + make -j21 make[1]: Entering directory '/build/reproducible-path/atomes-1.1.16' make all-recursive make[2]: Entering directory '/build/reproducible-path/atomes-1.1.16' @@ -2269,18 +2305,7 @@ gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/readers/read_xyz.o project/readers/read_xyz.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/close_p.o project/close_p.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/debugio.o project/debugio.c -project/readers/read_coord.c: In function 'open_coord_file': -project/readers/read_coord.c:272:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 272 | fread (coord_content, fsize, 1, coordf); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/init_p.o project/init_p.c -project/readers/read_npt.c: In function 'cell_get_lattice': -project/readers/read_npt.c:112:11: warning: ignoring return value of 'getline' declared with attribute 'warn_unused_result' [-Wunused-result] - 112 | getline (& line, & length, cellp); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -project/readers/read_npt.c:151:11: warning: ignoring return value of 'getline' declared with attribute 'warn_unused_result' [-Wunused-result] - 151 | getline (& line, & length, cellp); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/open_p.o project/open_p.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/project.o project/project.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/read_bond.o project/read_bond.c @@ -2288,7 +2313,18 @@ gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/read_field.o project/read_field.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/read_mol.o project/read_mol.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/read_opengl.o project/read_opengl.c +project/readers/read_npt.c: In function 'cell_get_lattice': +project/readers/read_npt.c:112:11: warning: ignoring return value of 'getline' declared with attribute 'warn_unused_result' [-Wunused-result] + 112 | getline (& line, & length, cellp); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +project/readers/read_npt.c:151:11: warning: ignoring return value of 'getline' declared with attribute 'warn_unused_result' [-Wunused-result] + 151 | getline (& line, & length, cellp); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/read_qm.o project/read_qm.c +project/readers/read_coord.c: In function 'open_coord_file': +project/readers/read_coord.c:272:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 272 | fread (coord_content, fsize, 1, coordf); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/save_bond.o project/save_bond.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/save_curve.o project/save_curve.c gcc -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -Igui/ -Iworkspace/ -Iproject/ -Iproject/readers/ -Icalc/ -Icalc/dl_poly/ -Icalc/lammps/ -Icalc/force_fields/ -Icalc/cpmd/ -Icalc/cp2k/ -Icurve/ -Iopengl/win/ -Iopengl/edit/ -Iopengl/draw/ -Iopengl/ -I. -DGTK_DISABLE_DEPRECATED -DOPENMP -fopenmp -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/i386-linux-gnu/dbus-1.0/include -pthread -I/usr/include/libxml2 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I/usr/include/i386-linux-gnu -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -Wformat -Werror=format-security -c -o project/save_field.o project/save_field.c @@ -2439,13 +2475,6 @@ gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/c3d.o fortran/c3d.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/chains.o fortran/chains.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/chains_ogl.o fortran/chains_ogl.F90 -opengl/ogl_shading.c: In function 'duplicate_object_3d': -opengl/ogl_shading.c:511:43: warning: '__builtin_memcpy' writing 20 bytes into a region of size 16 overflows the destination [-Wstringop-overflow=] - 511 | for (i=0; i<5; i++) new_obj -> shift[i] = old_obj -> shift[i]; - | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -opengl/ogl_shading.c:489:25: note: at offset 44 into destination object of size 60 allocated by 'g_malloc0' - 489 | object_3d * new_obj = g_malloc0 (sizeof*new_obj); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/chemistry.o fortran/chemistry.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/clean.o fortran/clean.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/cqvf.o fortran/cqvf.F90 @@ -2466,6 +2495,13 @@ gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/rings-guttman.o fortran/rings-guttman.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/rings-king.o fortran/rings-king.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/rings_ogl.o fortran/rings_ogl.F90 +opengl/ogl_shading.c: In function 'duplicate_object_3d': +opengl/ogl_shading.c:511:43: warning: '__builtin_memcpy' writing 20 bytes into a region of size 16 overflows the destination [-Wstringop-overflow=] + 511 | for (i=0; i<5; i++) new_obj -> shift[i] = old_obj -> shift[i]; + | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +opengl/ogl_shading.c:489:25: note: at offset 44 into destination object of size 60 allocated by 'g_malloc0' + 489 | object_3d * new_obj = g_malloc0 (sizeof*new_obj); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/rings-primitive.o fortran/rings-primitive.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/sk.o fortran/sk.F90 gfortran -DHAVE_CONFIG_H -I. -I.. -DLINUX -DGTK3 -DGTKGLAREA -DMENU_ICONS -DOPENMP -fopenmp -DPACKAGE_PREFIX=\""/usr/share/atomes"\" -DPACKAGE_LIBEXEC=\""/usr/libexec"\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/atomes-1.1.16=. -fstack-protector-strong -c -o fortran/spherical.o fortran/spherical.F90 @@ -2488,7 +2524,7 @@ make[2]: Leaving directory '/build/reproducible-path/atomes-1.1.16' make[1]: Leaving directory '/build/reproducible-path/atomes-1.1.16' dh_auto_test - make -j11 check "TESTSUITEFLAGS=-j11 --verbose" VERBOSE=1 + make -j21 check "TESTSUITEFLAGS=-j21 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/atomes-1.1.16' Making check in src make[2]: Entering directory '/build/reproducible-path/atomes-1.1.16/src' @@ -2510,7 +2546,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - make -j11 install DESTDIR=/build/reproducible-path/atomes-1.1.16/debian/tmp AM_UPDATE_INFO_DIR=no + make -j21 install DESTDIR=/build/reproducible-path/atomes-1.1.16/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/atomes-1.1.16' Making install in src make[2]: Entering directory '/build/reproducible-path/atomes-1.1.16/src' @@ -2535,12 +2571,12 @@ make[3]: Entering directory '/build/reproducible-path/atomes-1.1.16/data' make[3]: Nothing to be done for 'install-exec-am'. if test -d ./pixmaps; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/pixmaps; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/pixmaps; \ for pixmap in ./pixmaps/*; do \ if test -f $pixmap; then \ /usr/bin/install -c -m 644 $pixmap /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/pixmaps; \ else \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$pixmap; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$pixmap; \ for pixma in $pixmap/*; do \ if test -f $pixma; then \ /usr/bin/install -c -m 644 $pixma /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$pixmap; \ @@ -2550,17 +2586,17 @@ done \ fi if test -d ./library; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/library; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/library; \ for librar in ./library/*; do \ if test -f $librar; then \ /usr/bin/install -c -m 644 $librar /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/library; \ else \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$librar; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$librar; \ for libra in $librar/*; do \ if test -f $libra; then \ /usr/bin/install -c -m 644 $libra /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$librar; \ else \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$libra; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$libra; \ for libr in $libra/*; do \ if test -f $libr; then \ /usr/bin/install -c -m 644 $libr /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/atomes/$libra; \ @@ -2577,32 +2613,32 @@ make[3]: Entering directory '/build/reproducible-path/atomes-1.1.16' make[3]: Nothing to be done for 'install-exec-am'. if [ ! -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/bash-completion/completions ]; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/bash-completion/completions; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/bash-completion/completions; \ fi /usr/bin/mkdir -p '/build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/doc/atomes' /usr/bin/mkdir -p '/build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/man/man1/' - /usr/bin/install -c -m 644 atomes.1.gz '/build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/man/man1/' /usr/bin/install -c -m 644 README.md AUTHORS ChangeLog '/build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/doc/atomes' + /usr/bin/install -c -m 644 atomes.1.gz '/build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/man/man1/' /usr/bin/install -c -m 644 ./atomes-completion.sh /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/bash-completion/completions/atomes if [ ! -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps ]; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps; \ fi /usr/bin/install -c -m 644 ./metadata/icons/atomes.svg /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps /usr/bin/install -c -m 644 ./metadata/icons/atomes-workspace.svg /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps /usr/bin/install -c -m 644 ./metadata/icons/atomes-project.svg /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps /usr/bin/install -c -m 644 ./metadata/icons/atomes-coordinates.svg /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps if [ ! -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/mime/packages/ ]; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/mime/packages/; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/mime/packages/; \ fi /usr/bin/install -c -m 644 ./metadata/atomes-mime.xml /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/mime/packages/ if [ ! -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/metainfo ]; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/metainfo; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/metainfo; \ fi /usr/bin/install -c -m 644 ./metadata/fr.ipcms.atomes.appdata.xml /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/metainfo appstream-util validate-relax --nonet /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/metainfo/fr.ipcms.atomes.appdata.xml /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/metainfo/fr.ipcms.atomes.appdata.xml: OK if [ ! -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/applications ]; then \ - /bin/bash /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/applications; \ + /bin/sh /build/reproducible-path/atomes-1.1.16/install-sh -d /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/applications; \ fi /usr/bin/install -c -m 644 ./metadata/atomes.desktop /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/applications/atomes.desktop touch -c /build/reproducible-path/atomes-1.1.16/debian/tmp/usr/share/pixmaps @@ -2639,9 +2675,9 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'atomes' in '../atomes_1.1.16-1_i386.deb'. dpkg-deb: building package 'atomes-dbgsym' in '../atomes-dbgsym_1.1.16-1_i386.deb'. dpkg-deb: building package 'atomes-data' in '../atomes-data_1.1.16-1_all.deb'. +dpkg-deb: building package 'atomes' in '../atomes_1.1.16-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../atomes_1.1.16-1_i386.buildinfo dpkg-genchanges --build=binary -O../atomes_1.1.16-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -2649,12 +2685,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/118491/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/45874 and its subdirectories -I: Current time: Wed Jan 1 20:03:08 -12 2025 -I: pbuilder-time-stamp: 1735804988 +I: removing directory /srv/workspace/pbuilder/118491 and its subdirectories +I: Current time: Thu Feb 5 04:32:07 +14 2026 +I: pbuilder-time-stamp: 1770215527