Diff of the two buildlogs: -- --- b1/build.log 2024-07-13 23:49:00.220051893 +0000 +++ b2/build.log 2024-07-13 23:52:19.919556433 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jul 13 11:31:07 -12 2024 -I: pbuilder-time-stamp: 1720913467 +I: Current time: Sun Jul 14 13:49:18 +14 2024 +I: pbuilder-time-stamp: 1720914558 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying use-upstream-go-logger.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/17884/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/D01_modify_environment starting +debug: Running on virt64b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 13 23:49 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.21(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='6d64ea591db54e41aaca59fbb400857e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='17884' - PS1='# ' - PS2='> ' + INVOCATION_ID=6ecb5f37cf864048bc687a92f6943773 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3635 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.dLickKt1/pbuilderrc_dEGk --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.dLickKt1/b1 --logfile b1/build.log unikmer_0.20.0-1.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.dLickKt1/pbuilderrc_1qDH --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.dLickKt1/b2 --logfile b2/build.log unikmer_0.20.0-1.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux wbq0 6.1.0-22-armmp #1 SMP Debian 6.1.94-1 (2024-06-21) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-22-arm64 #1 SMP Debian 6.1.94-1 (2024-06-21) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 22:35 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/17884/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -253,7 +285,7 @@ Get: 101 http://deb.debian.org/debian trixie/main armhf golang-github-tatsushid-go-prettytable-dev all 0.0~git20141013.ed2d14c-3 [5492 B] Get: 102 http://deb.debian.org/debian trixie/main armhf golang-github-will-rowe-nthash-dev all 0.4.0-1 [5644 B] Get: 103 http://deb.debian.org/debian trixie/main armhf golang-github-zeebo-wyhash-dev all 0.0.1-3 [23.5 kB] -Fetched 104 MB in 14s (7493 kB/s) +Fetched 104 MB in 2s (51.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19407 files and directories currently installed.) @@ -680,7 +712,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/unikmer-0.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../unikmer_0.20.0-1_source.changes +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/unikmer-0.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../unikmer_0.20.0-1_source.changes dpkg-buildpackage: info: source package unikmer dpkg-buildpackage: info: source version 0.20.0-1 dpkg-buildpackage: info: source distribution unstable @@ -698,16 +734,16 @@ dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang - cd _build && go install -trimpath -v -p 3 github.com/shenwei356/unikmer/unikmer github.com/shenwei356/unikmer/unikmer/cmd -internal/unsafeheader + cd _build && go install -trimpath -v -p 4 github.com/shenwei356/unikmer/unikmer github.com/shenwei356/unikmer/unikmer/cmd internal/goarch +internal/unsafeheader internal/coverage/rtcov internal/cpu internal/godebugs internal/abi internal/chacha8rand -internal/bytealg internal/goexperiment +internal/bytealg internal/goos runtime/internal/atomic runtime/internal/math @@ -717,20 +753,19 @@ sync/atomic unicode unicode/utf8 -math/bits -math -runtime internal/itoa +math/bits cmp -slices log/internal internal/nettrace github.com/elliotwutingfeng/asciiset +slices +math github.com/dsnet/compress/bzip2/internal/sais github.com/dsnet/compress/internal +runtime crypto/internal/alias crypto/internal/boring/sig -github.com/klauspost/compress github.com/ulikunitz/xz/internal/hash container/list unicode/utf16 @@ -738,140 +773,141 @@ vendor/golang.org/x/crypto/internal/alias encoding github.com/rivo/uniseg -internal/reflectlite +github.com/klauspost/compress crypto/subtle +internal/reflectlite sync internal/testlog internal/bisect internal/singleflight runtime/cgo +internal/godebug +internal/intern errors sort io -bytes strconv +bytes strings reflect internal/oserror -syscall internal/safefilepath +path +syscall +vendor/golang.org/x/net/dns/dnsmessage +net/netip time internal/syscall/unix internal/syscall/execenv -path -vendor/golang.org/x/net/dns/dnsmessage -encoding/binary -internal/fmtsort -internal/godebug regexp/syntax -internal/intern -golang.org/x/sys/unix +bufio +container/heap +math/rand +hash +hash/crc32 +regexp +github.com/dsnet/compress/internal/errors +github.com/dsnet/compress +encoding/binary internal/poll io/fs +internal/fmtsort context +crypto +golang.org/x/sys/unix +crypto/cipher os -net/netip -regexp +crypto/internal/randutil +crypto/internal/boring +github.com/cespare/xxhash +github.com/klauspost/compress/internal/snapref +crypto/sha256 +hash/crc64 +crypto/aes +crypto/des +crypto/internal/edwards25519/field +crypto/internal/nistec/fiat +crypto/sha512 fmt net log path/filepath +compress/flate github.com/mattn/go-isatty github.com/mattn/go-colorable -bufio -container/heap -math/rand -compress/flate -math/big github.com/klauspost/compress/flate -github.com/dustin/go-humanize -hash +math/big os/exec -hash/crc32 -github.com/klauspost/pgzip github.com/mitchellh/go-homedir github.com/pkg/errors github.com/shenwei356/util/byteutil +github.com/klauspost/pgzip github.com/shenwei356/bio/seq -github.com/dsnet/compress/internal/errors -github.com/dsnet/compress github.com/dsnet/compress/internal/prefix -crypto -crypto/cipher -github.com/dsnet/compress/bzip2 -crypto/internal/boring -crypto/internal/randutil +github.com/dustin/go-humanize crypto/rand encoding/hex -github.com/cespare/xxhash github.com/klauspost/compress/fse -github.com/klauspost/compress/internal/snapref runtime/debug -github.com/klauspost/compress/huff0 -crypto/sha256 +github.com/dsnet/compress/bzip2 github.com/ulikunitz/xz/internal/xlog +compress/gzip +github.com/klauspost/compress/huff0 github.com/ulikunitz/xz/lzma +crypto/internal/nistec github.com/klauspost/compress/zstd -log/syslog -github.com/op/go-logging -hash/crc64 +crypto/ecdh +crypto/elliptic github.com/ulikunitz/xz -compress/gzip -crypto/aes -crypto/des -crypto/internal/edwards25519/field -crypto/internal/nistec/fiat crypto/internal/bigmod crypto/internal/boring/bbig -crypto/sha512 encoding/asn1 -vendor/golang.org/x/crypto/cryptobyte crypto/internal/edwards25519 +vendor/golang.org/x/crypto/cryptobyte +crypto/ed25519 crypto/hmac crypto/md5 crypto/rc4 +crypto/ecdsa crypto/rsa -crypto/ed25519 +log/syslog +github.com/op/go-logging crypto/sha1 crypto/dsa crypto/x509/pkix encoding/base64 net/url -crypto/internal/nistec -encoding/pem vendor/golang.org/x/crypto/chacha20 +encoding/pem vendor/golang.org/x/crypto/internal/poly1305 vendor/golang.org/x/crypto/hkdf vendor/golang.org/x/text/transform -vendor/golang.org/x/crypto/chacha20poly1305 vendor/golang.org/x/text/unicode/bidi -vendor/golang.org/x/text/unicode/norm -crypto/ecdh -crypto/elliptic -vendor/golang.org/x/text/secure/bidirule +vendor/golang.org/x/crypto/chacha20poly1305 +crypto/x509 net/textproto +vendor/golang.org/x/text/unicode/norm vendor/golang.org/x/net/http2/hpack -crypto/ecdsa +vendor/golang.org/x/text/secure/bidirule mime -vendor/golang.org/x/net/idna -crypto/x509 mime/quotedprintable -mime/multipart net/http/internal -vendor/golang.org/x/net/http/httpguts -vendor/golang.org/x/net/http/httpproxy net/http/internal/ascii os/user +mime/multipart github.com/twotwotwo/sorts +vendor/golang.org/x/net/idna github.com/will-rowe/nthash -github.com/zeebo/wyhash crypto/tls +github.com/zeebo/wyhash github.com/shenwei356/bio/sketches +vendor/golang.org/x/net/http/httpguts +vendor/golang.org/x/net/http/httpproxy github.com/twotwotwo/sorts/sortutil github.com/shenwei356/kmers github.com/mattn/go-runewidth -github.com/shenwei356/stable github.com/shenwei356/unik/v5 +github.com/shenwei356/stable github.com/shenwei356/util/pathutil github.com/shenwei356/natsort encoding/csv @@ -884,13 +920,13 @@ net/http github.com/spf13/cobra github.com/shenwei356/xopen -github.com/shenwei356/bio/taxdump github.com/shenwei356/breader +github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/unikmer/unikmer/cmd github.com/shenwei356/unikmer/unikmer dh_auto_test -O--builddirectory=_build -O--buildsystem=golang - cd _build && go test -vet=off -v -p 3 github.com/shenwei356/unikmer/unikmer github.com/shenwei356/unikmer/unikmer/cmd + cd _build && go test -vet=off -v -p 4 github.com/shenwei356/unikmer/unikmer github.com/shenwei356/unikmer/unikmer/cmd ? github.com/shenwei356/unikmer/unikmer [no test files] ? github.com/shenwei356/unikmer/unikmer/cmd [no test files] create-stamp debian/debhelper-build-stamp @@ -930,12 +966,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3635/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/17884 and its subdirectories -I: Current time: Sat Jul 13 11:48:55 -12 2024 -I: pbuilder-time-stamp: 1720914535 +I: removing directory /srv/workspace/pbuilder/3635 and its subdirectories +I: Current time: Sun Jul 14 13:52:16 +14 2024 +I: pbuilder-time-stamp: 1720914736